Spectral Clustering-Based Method for Identifying B Cell Clones


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Documentation for package ‘scoper’ version 1.0.1

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as.data.frame-method S4 class containing clonal assignments and summary data
ExampleDb Example database
hierarchicalClones Hierarchical clustering-based method for partitioning Ig sequences into clones.
identicalClones Identical clustering-based method for partitioning Ig sequences into clones.
plot-method S4 class containing clonal assignments and summary data
plotCloneSummary Plot clonal clustering summary
print-method S4 class containing clonal assignments and summary data
scoper The SCOPer package
ScoperClones S4 class containing clonal assignments and summary data
ScoperClones-class S4 class containing clonal assignments and summary data
ScoperClones-method S4 class containing clonal assignments and summary data
spectralClones Spectral clustering-based method for partitioning Ig sequences into clones.
summary-method S4 class containing clonal assignments and summary data