Latent Unknown Clustering with Integrated Data


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Documentation for package ‘LUCIDus’ version 2.0.0

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boot.lucid Bootstrap method of inference for LUCID
CovY Covariates Set 1
def.control Control parameters for EM algorithm
def.tune Define tuning parameters of regularization for LUCID model.
est.lucid Estimate latent unknown clusters with multi-omics data
G1 Genetic Features Set 1
G2 Genetic Features Set 2
plot.lucid Visualize the LUCID model through a Sankey diagram This function generates a Sankey diagram for the results of integrative clustering based on an 'lucid' object
predict.lucid Predict the outcome based on a fitted LUCID model
print.lucid Print the output of 'est.lucid'
print.sumlucid Print the output of LUCID in a nicer table
summary.lucid Summarize the results of LUCID model
tune.lucid Grid search for tuning parameters to fit the LUCID model
Y1 Outcome Set 1
Y2 Outcome Set 2
Z1 Biomarker Set 1
Z2 Biomarker Set 2