Error(s) in re-building vignettes:
  ...
--- re-building ‘wrProteoVignette1.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/wrProteo.Rcheck/vign_test/wrProteo/vignettes/wrProteoVignette1_files/figure-html/readMaxQuant1-1.png
1824x1536 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 415520 bytes
Input file size = 416198 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 392294
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 392294

Output IDAT size = 392294 bytes (23226 bytes decrease)
Output file size = 392372 bytes (23826 bytes = 5.72% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/wrProteo.Rcheck/vign_test/wrProteo/vignettes/wrProteoVignette1_files/figure-html/exportSdrfDraftMaxQuant5-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 271603 bytes
Input file size = 272077 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 255445
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 252961
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 252961

Output IDAT size = 252961 bytes (18642 bytes decrease)
Output file size = 253039 bytes (19038 bytes = 7.00% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/wrProteo.Rcheck/vign_test/wrProteo/vignettes/wrProteoVignette1_files/figure-html/readMaxQuantPeptides-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 192875 bytes
Input file size = 193229 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 164445
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 164445

Output IDAT size = 164445 bytes (28430 bytes decrease)
Output file size = 164523 bytes (28706 bytes = 14.86% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/wrProteo.Rcheck/vign_test/wrProteo/vignettes/wrProteoVignette1_files/figure-html/readIonbot1-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 130635 bytes
Input file size = 130893 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 108093
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 107862
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 1  f = 0		IDAT size = 107862

Output IDAT size = 107862 bytes (22773 bytes decrease)
Output file size = 107940 bytes (22953 bytes = 17.54% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/wrProteo.Rcheck/vign_test/wrProteo/vignettes/wrProteoVignette1_files/figure-html/fuseProteomicsProjects1-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 270335 bytes
Input file size = 270797 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 254303
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 251807
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 251807

Output IDAT size = 251807 bytes (18528 bytes decrease)
Output file size = 251885 bytes (18912 bytes = 6.98% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/wrProteo.Rcheck/vign_test/wrProteo/vignettes/wrProteoVignette1_files/figure-html/NA_MaxQuant-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 80977 bytes
Input file size = 81163 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 66291
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 66291

Output IDAT size = 66291 bytes (14686 bytes decrease)
Output file size = 66369 bytes (14794 bytes = 18.23% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/wrProteo.Rcheck/vign_test/wrProteo/vignettes/wrProteoVignette1_files/figure-html/NArepl_MaxQuant-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 53004 bytes
Input file size = 53154 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 43921
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 43921

Output IDAT size = 43921 bytes (9083 bytes decrease)
Output file size = 43999 bytes (9155 bytes = 17.22% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/wrProteo.Rcheck/vign_test/wrProteo/vignettes/wrProteoVignette1_files/figure-html/PCA1MQ-1.png
1824x2304 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 164948 bytes
Input file size = 165266 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 148237
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 148237

Output IDAT size = 148237 bytes (16711 bytes decrease)
Output file size = 148315 bytes (16951 bytes = 10.26% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/wrProteo.Rcheck/vign_test/wrProteo/vignettes/wrProteoVignette1_files/figure-html/MAplot1-1.png
1824x1248 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 78966 bytes
Input file size = 79152 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 66171
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 66171

Output IDAT size = 66171 bytes (12795 bytes decrease)
Output file size = 66249 bytes (12903 bytes = 16.30% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/wrProteo.Rcheck/vign_test/wrProteo/vignettes/wrProteoVignette1_files/figure-html/MAplot2-1.png
1824x1248 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 164842 bytes
Input file size = 165160 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 130503
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 130503

Output IDAT size = 130503 bytes (34339 bytes decrease)
Output file size = 130581 bytes (34579 bytes = 20.94% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/wrProteo.Rcheck/vign_test/wrProteo/vignettes/wrProteoVignette1_files/figure-html/VolcanoPlot1MQ-1.png
1824x1248 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 104269 bytes
Input file size = 104491 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 85713
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 85713

Output IDAT size = 85713 bytes (18556 bytes decrease)
Output file size = 85791 bytes (18700 bytes = 17.90% decrease)

--- finished re-building ‘wrProteoVignette1.Rmd’

Warning in file(con, "r") :
  cannot open file '/home/hornik/tmp/scratch/RtmpDmqVIC/file368484783a5260': No such file or directory
Error in file(con, "r") : cannot open the connection
Calls: <Anonymous> -> cat -> readLines -> file
Execution halted