Error(s) in re-building vignettes:
--- re-building ‘data_input.Rmd’ using rmarkdown
--- finished re-building ‘data_input.Rmd’

--- re-building ‘meaRtoolsGeneralUsage.Rmd’ using rmarkdown

 *** caught segfault ***
address 0x25, cause 'memory not mapped'

Traceback:
 1: grid.Call.graphics(C_text, as.graphicsAnnot(x$label), x$x, x$y,     resolveHJust(x$just, x$hjust), resolveVJust(x$just, x$vjust),     x$rot, x$check.overlap)
 2: drawDetails.text(x, recording = FALSE)
 3: drawDetails(x, recording = FALSE)
 4: drawGrob(x)
 5: recordGraphics(drawGrob(x), list(x = x), getNamespace("grid"))
 6: grid.draw.grob(obj)
 7: grid.draw(obj)
 8: drawInViewport(main, viewport(layout.pos.row = pos.heights$main,     name = trellis.vpname("main", prefix = prefix)))
 9: printFunction(x, ...)
10: print.trellis(p)
11: print(p)
12: .channel_plot_by_well(s[[i]], resp = "bs$per_spikes_in_burst",     resp_label = "% Spikes/Burst")
13: plot_plate_summary_for_bursts(s, analysis$output_perDIV_dir,     parameters)
14: withCallingHandlers(expr, warning = function(w) if (inherits(w,     classes)) tryInvokeRestart("muffleWarning"))
15: suppressWarnings(plot_plate_summary_for_bursts(s, analysis$output_perDIV_dir,     parameters))
16: eval(expr, envir, enclos)
17: eval(expr, envir, enclos)
18: withVisible(eval(expr, envir, enclos))
19: withCallingHandlers(withVisible(eval(expr, envir, enclos)), warning = wHandler,     error = eHandler, message = mHandler)
20: handle(ev <- withCallingHandlers(withVisible(eval(expr, envir,     enclos)), warning = wHandler, error = eHandler, message = mHandler))
21: timing_fn(handle(ev <- withCallingHandlers(withVisible(eval(expr,     envir, enclos)), warning = wHandler, error = eHandler, message = mHandler)))
22: evaluate_call(expr, parsed$src[[i]], envir = envir, enclos = enclos,     debug = debug, last = i == length(out), use_try = stop_on_error !=         2L, keep_warning = keep_warning, keep_message = keep_message,     output_handler = output_handler, include_timing = include_timing)
23: evaluate::evaluate(...)
24: evaluate(code, envir = env, new_device = FALSE, keep_warning = !isFALSE(options$warning),     keep_message = !isFALSE(options$message), stop_on_error = if (is.numeric(options$error)) options$error else {        if (options$error && options$include)             0L        else 2L    }, output_handler = knit_handlers(options$render, options))
25: in_dir(input_dir(), evaluate(code, envir = env, new_device = FALSE,     keep_warning = !isFALSE(options$warning), keep_message = !isFALSE(options$message),     stop_on_error = if (is.numeric(options$error)) options$error else {        if (options$error && options$include)             0L        else 2L    }, output_handler = knit_handlers(options$render, options)))
26: eng_r(options)
27: block_exec(params)
28: call_block(x)
29: process_group.block(group)
30: process_group(group)
31: withCallingHandlers(if (tangle) process_tangle(group) else process_group(group),     error = function(e) {        setwd(wd)        cat(res, sep = "\n", file = output %n% "")        message("Quitting from lines ", paste(current_lines(i),             collapse = "-"), " (", knit_concord$get("infile"),             ") ")    })
32: process_file(text, output)
33: knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
34: rmarkdown::render(file, encoding = encoding, quiet = quiet, envir = globalenv(),     output_dir = getwd(), ...)
35: vweave_rmarkdown(...)
36: engine$weave(file, quiet = quiet, encoding = enc)
37: doTryCatch(return(expr), name, parentenv, handler)
38: tryCatchOne(expr, names, parentenv, handlers[[1L]])
39: tryCatchList(expr, classes, parentenv, handlers)
40: tryCatch({    engine$weave(file, quiet = quiet, encoding = enc)    setwd(startdir)    output <- find_vignette_product(name, by = "weave", engine = engine)    if (!have.makefile && vignette_is_tex(output)) {        texi2pdf(file = output, clean = FALSE, quiet = quiet)        output <- find_vignette_product(name, by = "texi2pdf",             engine = engine)    }    outputs <- c(outputs, output)}, error = function(e) {    thisOK <<- FALSE    fails <<- c(fails, file)    message(gettextf("Error: processing vignette '%s' failed with diagnostics:\n%s",         file, conditionMessage(e)))})
41: tools:::buildVignettes(dir = "/data/gannet/ripley/R/packages/tests-clang/meaRtools.Rcheck/vign_test/meaRtools")
An irrecoverable exception occurred. R is aborting now ...