Error(s) in re-building vignettes:
--- re-building ‘i-introduction.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
--- finished re-building ‘i-introduction.Rmd’

--- re-building ‘ii-modules.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.

Attaching package: 'igraph'

The following objects are masked from 'package:stats':

    decompose, spectrum

The following object is masked from 'package:base':

    union

Loading required package: quickPlot
Loading required package: reproducible

Attaching package: 'SpaDES.core'

The following object is masked from 'package:reproducible':

    paddedFloatToChar

The following objects are masked from 'package:stats':

    end, start

The following object is masked from 'package:utils':

    citation

Loading required package: SpaDES.tools
Loading required package: RandomFields
Loading required package: sp
Loading required package: RandomFieldsUtils

Attaching package: 'RandomFields'

The following object is masked from 'package:RandomFieldsUtils':

    RFoptions

Setting:
  options(
    spades.modulePath = '/Volumes/Builds/packages/high-sierra-x86_64/results/4.0/SpaDES.core.Rcheck/SpaDES.core/sampleModules'
  )
Paths set to:
  options(
    rasterTmpDir = '/Volumes/Temp/tmp/RtmpVuCQwQ/raster'
    reproducible.cachePath = '/Volumes/Temp/tmp/RtmpVuCQwQ/Require/cache'
    spades.inputPath = '/Volumes/Temp/tmp/RtmpMW0Mbw/SpaDES/inputs'
    spades.outputPath = '/Volumes/Temp/tmp/RtmpMW0Mbw/SpaDES/outputs'
    spades.modulePath = '/Volumes/Builds/packages/high-sierra-x86_64/results/4.0/SpaDES.core.Rcheck/SpaDES.core/sampleModules'
  )
Loading required package: RColorBrewer
Loading required package: raster
2020-12-28 06:41:13 INFO:: total elpsd: 0.0013 secs | 0 checkpoint init 0
2020-12-28 06:41:14 INFO:: total elpsd: 0.15 secs | 0 save init 0
2020-12-28 06:41:14 INFO:: total elpsd: 0.15 secs | 0 progress init 0
2020-12-28 06:41:14 INFO:: total elpsd: 0.15 secs | 0 load init 0
2020-12-28 06:41:14 INFO:: total elpsd: 0.15 secs | 0 randomLandscapes init 
2020-12-28 06:41:14 INFO:: total elpsd: 0.98 secs | 0 fireSpread init 1
2020-12-28 06:41:14 INFO:: total elpsd: 0.99 secs | 0 caribouMovement init 1
2020-12-28 06:41:14 INFO:: total elpsd: 1 secs | 0 fireSpread burn 5
2020-12-28 06:41:15 INFO:: total elpsd: 1.1 secs | 0 fireSpread stats 5
2020-12-28 06:41:15 INFO:: total elpsd: 1.1 secs | 0 randomLandscapes plot 1
2020-12-28 06:41:15 INFO:: total elpsd: 1.2 secs | 0 fireSpread plot.init 10
2020-12-28 06:41:15 INFO:: total elpsd: 1.3 secs | 0.08333 caribouMovement p
2020-12-28 06:41:15 INFO:: total elpsd: 1.3 secs | 0.1667 caribouMovement pl
2020-12-28 06:41:15 INFO:: total elpsd: 1.4 secs | 0.25 caribouMovement plot
2020-12-28 06:41:15 INFO:: total elpsd: 1.4 secs | 0.3333 caribouMovement pl
2020-12-28 06:41:15 INFO:: total elpsd: 1.5 secs | 0.4167 caribouMovement pl
2020-12-28 06:41:15 INFO:: total elpsd: 1.5 secs | 0.5 caribouMovement plot 
2020-12-28 06:41:15 INFO:: total elpsd: 1.6 secs | 0.5833 caribouMovement pl
2020-12-28 06:41:15 INFO:: total elpsd: 1.7 secs | 0.6667 caribouMovement pl
2020-12-28 06:41:15 INFO:: total elpsd: 1.7 secs | 0.75 caribouMovement plot
2020-12-28 06:41:15 INFO:: total elpsd: 1.8 secs | 0.8333 caribouMovement pl
2020-12-28 06:41:15 INFO:: total elpsd: 1.8 secs | 0.9167 caribouMovement pl
2020-12-28 06:41:15 INFO:: total elpsd: 1.9 secs | 1 caribouMovement move 5
2020-12-28 06:41:15 INFO:: total elpsd: 1.9 secs | 1 fireSpread burn 5
2020-12-28 06:41:16 INFO:: total elpsd: 2.3 secs | 1 fireSpread stats 5
2020-12-28 06:41:16 INFO:: total elpsd: 2.3 secs | 1 caribouMovement plot 10
2020-12-28 06:41:16 INFO:: total elpsd: 2.4 secs | 1.083 caribouMovement mov
2020-12-28 06:41:16 INFO:: total elpsd: 2.4 secs | 1.083 caribouMovement plo
2020-12-28 06:41:16 INFO:: total elpsd: 2.4 secs | 1.167 caribouMovement mov
2020-12-28 06:41:16 INFO:: total elpsd: 2.4 secs | 1.167 caribouMovement plo
2020-12-28 06:41:16 INFO:: total elpsd: 2.5 secs | 1.25 caribouMovement move
2020-12-28 06:41:16 INFO:: total elpsd: 2.5 secs | 1.25 caribouMovement plot
2020-12-28 06:41:16 INFO:: total elpsd: 2.6 secs | 1.333 caribouMovement mov
2020-12-28 06:41:16 INFO:: total elpsd: 2.6 secs | 1.333 caribouMovement plo
2020-12-28 06:41:16 INFO:: total elpsd: 2.6 secs | 1.417 caribouMovement mov
2020-12-28 06:41:16 INFO:: total elpsd: 2.6 secs | 1.417 caribouMovement plo
2020-12-28 06:41:16 INFO:: total elpsd: 2.7 secs | 1.5 caribouMovement move 
2020-12-28 06:41:16 INFO:: total elpsd: 2.7 secs | 1.5 caribouMovement plot 
2020-12-28 06:41:16 INFO:: total elpsd: 2.8 secs | 1.583 caribouMovement mov
2020-12-28 06:41:16 INFO:: total elpsd: 2.8 secs | 1.583 caribouMovement plo
2020-12-28 06:41:16 INFO:: total elpsd: 2.8 secs | 1.667 caribouMovement mov
2020-12-28 06:41:16 INFO:: total elpsd: 2.8 secs | 1.667 caribouMovement plo
2020-12-28 06:41:16 INFO:: total elpsd: 2.9 secs | 1.75 caribouMovement move
2020-12-28 06:41:16 INFO:: total elpsd: 2.9 secs | 1.75 caribouMovement plot
2020-12-28 06:41:16 INFO:: total elpsd: 3 secs | 1.833 caribouMovement move 
2020-12-28 06:41:16 INFO:: total elpsd: 3 secs | 1.833 caribouMovement plot 
2020-12-28 06:41:16 INFO:: total elpsd: 3 secs | 1.917 caribouMovement move 
2020-12-28 06:41:17 INFO:: total elpsd: 3 secs | 1.917 caribouMovement plot 
2020-12-28 06:41:17 INFO:: total elpsd: 3.1 secs | 2 fireSpread burn 5
2020-12-28 06:41:17 INFO:: total elpsd: 3.1 secs | 2 caribouMovement move 5
2020-12-28 06:41:17 INFO:: total elpsd: 3.1 secs | 2 fireSpread stats 5
2020-12-28 06:41:17 INFO:: total elpsd: 3.1 secs | 2 caribouMovement plot 10
simList saved in
 SpaDES.core:::.pkgEnv$.sim 
It will be deleted at next spades() call.
Quitting from lines 386-390 (ii-modules.Rmd) 
Error: processing vignette 'ii-modules.Rmd' failed with diagnostics:
cannot open the connection
--- failed re-building ‘ii-modules.Rmd’

--- re-building ‘iii-cache.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Loading required package: sp

Attaching package: 'raster'

The following object is masked from 'package:magrittr':

    extract

Loading required package: quickPlot

Attaching package: 'SpaDES.core'

The following object is masked from 'package:reproducible':

    paddedFloatToChar

The following objects are masked from 'package:stats':

    end, start

The following object is masked from 'package:utils':

    citation

Setting:
  options(
    spades.modulePath = '/Volumes/Builds/packages/high-sierra-x86_64/results/4.0/SpaDES.core.Rcheck/SpaDES.core/sampleModules'
  )
Paths set to:
  options(
    rasterTmpDir = '/Volumes/Temp/tmp/RtmpLoDBdM/raster'
    reproducible.cachePath = '/Volumes/Temp/tmp/RtmpLoDBdM/Require/cache'
    spades.inputPath = '/Volumes/Temp/tmp/RtmpMW0Mbw/SpaDES/inputs'
    spades.outputPath = '/Volumes/Temp/tmp/RtmpMW0Mbw/SpaDES/outputs'
    spades.modulePath = '/Volumes/Builds/packages/high-sierra-x86_64/results/4.0/SpaDES.core.Rcheck/SpaDES.core/sampleModules'
  )
Loading required package: RColorBrewer
Loading required package: SpaDES.tools
--- finished re-building ‘iii-cache.Rmd’

--- re-building ‘iv-advanced.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
--- finished re-building ‘iv-advanced.Rmd’

SUMMARY: processing the following file failed:
  ‘ii-modules.Rmd’

Error: Vignette re-building failed.
Execution halted