Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘docxtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘docxtractr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dodgr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: grid
Loading required package: conf.design
Error: package or namespace load failed for ‘DoE.base’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘DoE.MIParray’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘DoEstRare’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/DoEstRare/libs/DoEstRare.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/DoEstRare/libs/DoEstRare.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: FrF2
Loading required package: DoE.base
Loading required package: grid
Loading required package: conf.design
Error: package or namespace load failed for ‘DoE.base’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘DoE.base’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: future
Error: package or namespace load failed for ‘future’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Error: package ‘future’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Dominance’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: foreach
Loading required package: iterators
Loading required package: Rmpi
Error: package or namespace load failed for ‘Rmpi’:
 .onLoad failed in loadNamespace() for ‘Rmpi’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rmpi/libs/Rmpi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rmpi/libs/Rmpi.so: failed to map segment from shared object
Error: package ‘Rmpi’ could not be loaded
Execution halted
Found the following calls to attach():
File ‘doParallel/R/doParallel.R’:
  attach(exportEnv)
See section ‘Good practice’ in ‘?attach’.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rredis
Error: package or namespace load failed for ‘rredis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rredis/libs/rredis.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rredis/libs/rredis.so: failed to map segment from shared object
Error: package ‘rredis’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘doremi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: foreach
Loading required package: rngtools
Loading required package: pkgmaker
Loading required package: registry
Error: package or namespace load failed for ‘pkgmaker’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Error: package ‘pkgmaker’ could not be loaded
Execution halted
Found the following calls to attach():
File ‘doSNOW/R/doSNOW.R’:
  attach(exportEnv)
See section ‘Good practice’ in ‘?attach’.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘DOS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘dosresmeta.Rnw’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
dostats: no visible binding for global variable ‘na.fail’
first: no visible global function definition for ‘head’
last: no visible global function definition for ‘tail’
pval.default: no visible global function definition for ‘.hasSlot’
pval.lm: no visible global function definition for ‘anova’
Undefined global functions or variables:
  .hasSlot anova head na.fail tail
Consider adding
  importFrom("methods", ".hasSlot")
  importFrom("stats", "anova", "na.fail")
  importFrom("utils", "head", "tail")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Running examples in ‘dostats-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: dostats
> ### Title: Convenient interface for computing statistics on a vector
> ### Aliases: dostats
> ### Keywords: misc utilities,
> 
> ### ** Examples
> 
> data(mtcars)
> library(plyr)
Error: package or namespace load failed for ‘plyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running ‘test_package.R’ [0s/0s]
Running the tests in ‘tests/test_package.R’ failed.
Complete output:
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dotCall64’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘DOT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘downloader’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘downsize.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tcltk
Loading required package: sem
Error: package or namespace load failed for ‘sem’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘sem’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dparser’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dparser/libs/dparser.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dparser/libs/dparser.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘DPBBM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  Warning: ‘__var_1_mmb.offset’ is used uninitialized in this function [-Wuninitialized]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/dpglasso.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dpglasso’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dpglasso/libs/dpglasso.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dpglasso/libs/dpglasso.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dplR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dplyrAssist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dplyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dpmr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘DPpackage’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘DPtree’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  compnoreggilks.cpp:31:10: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
  compnoreggilks.cpp:90:10: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
  compreggilks.cpp:32:10: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
  compreggilks.cpp:88:10: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
  compreggilks.cpp:150:10: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
  compreggilks.cpp:207:10: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
  compreggilks.cpp:380:8: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/DPWeibull.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dqrng’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dqshiny’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dr4pl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘drake’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘CombiningDratAndTravis.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Non-standard file/directory found at top level:
  ‘visualRefCard’
The following files look like leftovers:
  ‘drawExpression/visualRefCard/svn-commit.tmp’
Please remove them from your package.
Found the following apparent S3 methods exported but not registered:
  drawDetails.dataframeBox drawDetails.functionText drawDetails.lineBox
  drawDetails.listBox drawDetails.matrixBox drawDetails.vectorBox
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
.drawTree: no visible global function definition for ‘pdf’
.drawTree: no visible global function definition for ‘dev.off’
drawExpression: no visible global function definition for ‘plot.new’
Undefined global functions or variables:
  dev.off pdf plot.new
Consider adding
  importFrom("grDevices", "dev.off", "pdf")
  importFrom("graphics", "plot.new")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘DRaWR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Failed with error:  'package 'ggplot2' could not be loaded'
  Error in .requirePackage(package) : 
    unable to find required package 'rstan'
  Calls: <Anonymous> ... .extendsForS3 -> extends -> getClassDef -> .requirePackage
  Execution halted
Running examples in ‘DrBats-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: W.QR
> ### Title: Build and decompose a low-rank matrix W
> ### Aliases: W.QR
> 
> ### ** Examples
> 
> res <- drbats.simul(N = 5, P = 100, t.range = c(5, 100), breaks = 8)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: drbats.simul ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘DataSimulationandProjection.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘DREGAR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: dregar2
> ### Title: Estimating (just) adaptive-DREGAR coefficients using an
> ###   iterative 2-step procedure
> ### Aliases: dregar2
> 
> ### ** Examples
> 
> par(mfrow=c(2,2))
>   m=sim.dregar(n=500 ,  beta=1:4, phi=generateAR(2), theta=.3, 
+                n.z.coeffs=3 , plot=TRUE) # generating data

 please wait ... 
                    
>   r=dregar2(data = m$rawdata,da = 1:3,ar = 1:2,mselection = 4,
+             penalized = 1 )# estimating parameters using2-step adaptive-DREGAR
Loading required namespace: msgps
Failed with error:  ‘unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/msgps/libs/msgps.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/msgps/libs/msgps.so: failed to map segment from shared object’
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/msgps/libs/msgps.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/msgps/libs/msgps.so: failed to map segment from shared object
Calls: dregar2 ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘drfit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: nleqslv
Error: package or namespace load failed for ‘nleqslv’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nleqslv/libs/nleqslv.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nleqslv/libs/nleqslv.so: failed to map segment from shared object
Error: package ‘nleqslv’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘driftR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘DrImpute’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: readbitmap
Error: package or namespace load failed for ‘readbitmap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jpeg/libs/jpeg.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jpeg/libs/jpeg.so: failed to map segment from shared object
Error: package ‘readbitmap’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘drLumi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘drmdel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/drmdel/libs/drmdel.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/drmdel/libs/drmdel.so: failed to map segment from shared object
Execution halted
compute_xsq: no visible global function definition for ‘chisq.test’
Undefined global functions or variables:
  chisq.test
Consider adding
  importFrom("stats", "chisq.test")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘droptest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Running examples in ‘drsmooth-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: drsmooth
> ### Title: Dose-response Modeling with Smoothing Splines
> ### Aliases: drsmooth
> 
> ### ** Examples
> 
> # Produces and plots spline model with confidence bounds, and prints key metrics.
> # For the plot only, see spline.plot
> # The STD_bias is defaulted here to FALSE to speed run time.
> # For continuous outcomes
> data(DRdata)
> drsmooth("dose", "MF_Log", data_type = "continuous", k = 4, return_predict = FALSE,
+ write_predict = FALSE, STD_bias = FALSE, data=DRdata)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: drsmooth ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Running ‘test-all.R’ [0s/0s]
Running the tests in ‘tests/test-all.R’ failed.
Complete output:
  > # Run all tests in the inst/tests directory:
  > 
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘drtmle’:
 .onLoad failed in loadNamespace() for ‘nnls’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nnls/libs/nnls.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nnls/libs/nnls.so: failed to map segment from shared object
Execution halted
Running examples in ‘DrugClust-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: KSeedsClusters
> ### Title: KSeedsClusters
> ### Aliases: KSeedsClusters
> 
> ### ** Examples
> 
> r <- 8
> c <- 10
> m0 <- matrix(0, r, c)
> num_clusters=4
> features<-apply(m0, c(1,2), function(x) sample(c(0,1),1))
> s<-RandomSeedGenerator(num_clusters,nrow(features))
> Seed<-SeedSelection(features,num_clusters,s)
> clusters<-KSeedsClusters (features,num_clusters,Seed,s)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so: failed to map segment from shared object
Calls: KSeedsClusters ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘drugCombo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dsa’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘DSBayes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tfplot
Loading required package: tframe
Error: package or namespace load failed for ‘dse’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dse/libs/dse.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dse/libs/dse.so: failed to map segment from shared object
Execution halted
Running examples in ‘dslabs-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ds_theme_set
> ### Title: dslabs theme set
> ### Aliases: ds_theme_set
> 
> ### ** Examples
> 
> library(ggplot2)
Error: package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘DSL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/DSL/libs/DSL.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/DSL/libs/DSL.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dsmodels’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
X: no visible global function definition for ‘read.table’
dplot: no visible global function definition for ‘matplot’
dplot: no visible global function definition for ‘legend’
dscor : <anonymous>: no visible global function definition for ‘combn’
dscor : <anonymous> : <anonymous>: no visible global function
  definition for ‘cor.test’
gds: no visible binding for global variable ‘na.omit’
gds : medi: no visible global function definition for ‘median’
gds : quant: no visible global function definition for ‘quantile’
gds: no visible binding for global variable ‘shapiro.test’
tables: no visible binding for global variable ‘chisq.test’
tables: no visible binding for global variable ‘fisher.test’
Undefined global functions or variables:
  chisq.test combn cor.test fisher.test legend matplot median na.omit
  quantile read.table shapiro.test
Consider adding
  importFrom("graphics", "legend", "matplot")
  importFrom("stats", "chisq.test", "cor.test", "fisher.test", "median",
             "na.omit", "quantile", "shapiro.test")
  importFrom("utils", "combn", "read.table")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dsr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dsrTest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘DstarM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/DstarM/libs/DstarM.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/DstarM/libs/DstarM.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Monty-hall-Example.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dSVA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BiocParallel/libs/BiocParallel.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BiocParallel/libs/BiocParallel.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘DSviaDRM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dtables’:
 .onLoad failed in loadNamespace() for ‘mnormt’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘basic-deconvolution.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
efron.petrosian: no visible global function definition for ‘dev.new’
efron.petrosian: no visible global function definition for ‘par’
efron.petrosian: no visible global function definition for ‘plot’
efron.petrosian: no visible global function definition for ‘segments’
lynden: no visible global function definition for ‘dev.new’
lynden: no visible global function definition for ‘par’
lynden: no visible global function definition for ‘plot’
lynden: no visible global function definition for ‘segments’
shen: no visible global function definition for ‘image’
shen: no visible global function definition for ‘runif’
shen: no visible global function definition for ‘filled.contour’
shen: no visible binding for global variable ‘rainbow’
shen: no visible binding for global variable ‘topo.colors’
shen: no visible global function definition for ‘topo.colors’
shen: no visible global function definition for ‘persp’
shen: no visible global function definition for ‘dev.new’
shen: no visible global function definition for ‘par’
shen: no visible global function definition for ‘plot’
shen: no visible global function definition for ‘segments’
Undefined global functions or variables:
  dev.new filled.contour image par persp plot rainbow runif segments
  topo.colors
Consider adding
  importFrom("grDevices", "dev.new", "rainbow", "topo.colors")
  importFrom("graphics", "filled.contour", "image", "par", "persp",
             "plot", "segments")
  importFrom("stats", "runif")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘DtD’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
DTK.plot: no visible global function definition for ‘plot’
DTK.plot: no visible global function definition for ‘axis’
DTK.plot: no visible global function definition for ‘title’
DTK.plot: no visible global function definition for ‘lines’
DTK.plot: no visible global function definition for ‘points’
DTK.test: no visible binding for global variable ‘sd’
DTK.test: no visible global function definition for ‘qtukey’
TK.test: no visible global function definition for ‘TukeyHSD’
TK.test: no visible global function definition for ‘aov’
Undefined global functions or variables:
  TukeyHSD aov axis lines plot points qtukey sd title
Consider adding
  importFrom("graphics", "axis", "lines", "plot", "points", "title")
  importFrom("stats", "TukeyHSD", "aov", "qtukey", "sd")
to your NAMESPACE file.
DTMC: no visible global function definition for ‘runif’
DTMC: no visible global function definition for ‘plot’
Undefined global functions or variables:
  plot runif
Consider adding
  importFrom("graphics", "plot")
  importFrom("stats", "runif")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dtplyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dtp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘DT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘DTR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘DTWBI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/proxy/libs/proxy.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/proxy/libs/proxy.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘DTWUMI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/proxy/libs/proxy.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/proxy/libs/proxy.so: failed to map segment from shared object
Execution halted
Warning: namespace ‘digest’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘digest’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
See chapter ‘System and foreign language interfaces’ in the ‘Writing R
Extensions’ manual.
Warning: namespace ‘digest’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘digest’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Running examples in ‘duawranglr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: check_dua_restrictions
> ### Title: Check data frame columns against currently set restrictions
> ### Aliases: check_dua_restrictions
> 
> ### ** Examples
> 
> ## --------------
> ## Setup
> ## --------------
> ## set DUA crosswalk
> dua_cw <- system.file('extdata', 'dua_cw.csv', package = 'duawranglr')
> set_dua_cw(dua_cw)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: set_dua_cw ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘duawranglr.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
dummy: no visible global function definition for ‘model.matrix’
dummy: no visible global function definition for ‘model.frame’
Undefined global functions or variables:
  model.frame model.matrix
Consider adding
  importFrom("stats", "model.frame", "model.matrix")
to your NAMESPACE file.
Rd file 'dummy.Rd':
  \usage lines wider than 90 characters:
     dummy.data.frame(data, names = NULL, omit.constants=TRUE, dummy.classes = getOption("dummy.classes"), all = TRUE, ...)

These lines will be truncated in the PDF manual.
Clough: no visible global function definition for ‘dgamma’
computePosterior,Counts: no visible global function definition for
  ‘dnbinom’
getPosteriorParam,Counts: no visible global function definition for
  ‘qgamma’
getPosteriorParam,Counts: no visible global function definition for
  ‘dgamma’
getPosteriorParam,Counts: no visible global function definition for
  ‘pgamma’
plotPosterior,Counts: no visible global function definition for ‘axis’
plotPosterior,Counts: no visible global function definition for
  ‘abline’
plotPosterior,Counts: no visible global function definition for ‘lines’
plotPosterior,Counts: no visible global function definition for ‘rect’
plotPosterior,Counts: no visible global function definition for ‘curve’
plotPosterior,Counts: no visible global function definition for
  ‘dgamma’
plotPosterior,Counts: no visible global function definition for
  ‘legend’
show,Counts: no visible global function definition for ‘head’
show,Counts: no visible global function definition for ‘tail’
Undefined global functions or variables:
  abline axis curve dgamma dnbinom head legend lines pgamma qgamma rect
  tail
Consider adding
  importFrom("graphics", "abline", "axis", "curve", "legend", "lines",
             "rect")
  importFrom("stats", "dgamma", "dnbinom", "pgamma", "qgamma")
  importFrom("utils", "head", "tail")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘DVHmetrics’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rbenchmark
Error: package or namespace load failed for ‘dvmisc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running ‘testthat.R’ [0s/0s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > "dwapi-r
  + Copyright 2017 data.world, Inc.
  + 
  + Licensed under the Apache License, Version 2.0 (the \"License\");
  + you may not use this file except in compliance with the License.
  + 
  + You may obtain a copy of the License at
  + http://www.apache.org/licenses/LICENSE-2.0
  + 
  + Unless required by applicable law or agreed to in writing, software
  + distributed under the License is distributed on an \"AS IS\" BASIS,
  + WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or
  + implied. See the License for the specific language governing
  + permissions and limitations under the License.
  + 
  + This product includes software developed at data.world, Inc.
  + https://data.world"
  [1] "dwapi-r\nCopyright 2017 data.world, Inc.\n\nLicensed under the Apache License, Version 2.0 (the \"License\");\nyou may not use this file except in compliance with the License.\n\nYou may obtain a copy of the License at\nhttp://www.apache.org/licenses/LICENSE-2.0\n\nUnless required by applicable law or agreed to in writing, software\ndistributed under the License is distributed on an \"AS IS\" BASIS,\nWITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or\nimplied. See the License for the specific language governing\npermissions and limitations under the License.\n\nThis product includes software developed at data.world, Inc.\nhttps://data.world"
  > 
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘quickstart.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘DWLasso’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘DWreg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dygraphs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dynamac’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘DynamicGP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/DynamicGP/libs/DynamicGP.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/DynamicGP/libs/DynamicGP.so: failed to map segment from shared object
Execution halted
Non-standard file/directory found at top level:
  ‘HISTORY’
Loading this package had a fatal error status code 1
Loading log:
Loading required package: ggm
Loading required package: igraph
Error: package or namespace load failed for ‘igraph’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Error: package ‘igraph’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: glamlasso
Error: package or namespace load failed for ‘glamlasso’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘glamlasso’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dynatopmodel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/deSolve/libs/deSolve.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/deSolve/libs/deSolve.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dynaTree’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dynaTree/libs/dynaTree.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dynaTree/libs/dynaTree.so: failed to map segment from shared object
Execution halted
MultiTestH0 : MultiTestOneColumn: no visible global function definition
  for ‘pchisq’
RunClustering : CheckClusterNew: no visible global function definition
  for ‘qchisq’
RunClustering: no visible global function definition for ‘qchisq’
RunDenoising: no visible binding for global variable ‘var’
RunDenoising: no visible global function definition for ‘qchisq’
RunDenoising: no visible binding for global variable ‘median’
RunDenoising: no visible global function definition for ‘var’
RunDenoising : buildEstimate: no visible global function definition for
  ‘qchisq’
Undefined global functions or variables:
  median pchisq qchisq var
Consider adding
  importFrom("stats", "median", "pchisq", "qchisq", "var")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: lpridge
Error: package or namespace load failed for ‘lpridge’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lpridge/libs/lpridge.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lpridge/libs/lpridge.so: failed to map segment from shared object
Error: package ‘lpridge’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dynetNLAResistance’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
GetIntMod: no visible global function definition for ‘arima’
GetLikeDI: no visible global function definition for ‘arima’
GetLikeDI: no visible global function definition for ‘logLik’
GetPV: no visible global function definition for ‘optimize’
GetPV: no visible global function definition for ‘pchisq’
fitdi: no visible global function definition for ‘optimize’
Undefined global functions or variables:
  arima logLik optimize pchisq
Consider adding
  importFrom("stats", "arima", "logLik", "optimize", "pchisq")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dynpanel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Running examples in ‘dynprog-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: %where%
> ### Title: Connects a recursion with sequences it should recurse over.
> ### Aliases: %where%
> 
> ### ** Examples
> 
> 
> # Fibonnaci numbers
> fib <- {
+   F[n] <- 1 ? n <= 2
+   F[n] <- F[n-1] + F[n-2]
+ } %where% {
+   n <- 1:10
+ }
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: %where% ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dynRB’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dynsbm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dynsim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dynsurv’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: modelObj
Error: package or namespace load failed for ‘DynTxRegime’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/kernlab/libs/kernlab.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/kernlab/libs/kernlab.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘dynutils’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Running examples in ‘DySeq-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: single.LogSeq
> ### Title: single.LogSeq
> ### Aliases: single.LogSeq
> 
> ### ** Examples
> 
> data(CouplesCope)
> my.states<-StateExpand(CouplesCope, 2:49, 50:97)
> my.trans<-StateTrans(my.states, FALSE)
> my.logseq<-LogSeq(my.trans, single.case=TRUE)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: LogSeq ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘e1071’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘eaf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/eaf/libs/eaf.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/eaf/libs/eaf.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: shinyFiles
Error: package or namespace load failed for ‘shinyFiles’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘shinyFiles’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EAinference’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘eAnalytics’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/png/libs/png.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/png/libs/png.so: failed to map segment from shared object
Execution halted
Running examples in ‘earlygating-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: beta_par
> ### Title: Parameters of Beta distribution given Historical Data
> ### Aliases: beta_par
> 
> ### ** Examples
> 
> mu_cov <- c("date", "Phase")
> orr <- "ORR"
> newdata <- data.frame("date" = 2017, "Phase" = factor(3))
> studs <- data.frame("ORR"= c(0.693, 0.580, 0.693, 0.477, 0.609,
+                              0.727, 0.727, 0.591, 0.362, 0.593,
+                              0.792, 0.620, 0.550, 0.690, 0.776),
+                     "date" = c( 2011, 2008.5, 2009, 1996, 2001,
+                                 2003.5, 2002.5, 2008, 2000,
+                                 2006, 2005, 2007.5, 2009.5,
+                                 2010.5, 2010),
+                     "Phase" = factor(c(3, 2, 3, 3, 2, 2, 3, 3, 3, 3,
+                                 2, 3, 3, 3, 2)),
+                     "N" = c(293, 69, 336, 235, 92, 110, 131, 208, 94,
+                             123, 53, 182, 267, 239, 237))
> 
> beta_par(mu_cov=mu_cov, orr=orr, data=studs, newdata=newdata,
+ weights = studs$N/mean(studs$N))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: beta_par ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Running examples in ‘earlyR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: get_R
> ### Title: Estimate the Reproduction Number
> ### Aliases: get_R get_R.default get_R.integer get_R.numeric
> ###   get_R.incidence
> 
> ### ** Examples
> 
> 
> if (require(incidence)) {
+ 
+ ## example: onsets on days 1, 5, 6 and 12; estimation on day 24
+  x <- incidence(c(1, 5, 6, 12), last_date = 24)
+  x
+  as.data.frame(x)
+  plot(x)
+  res <- get_R(x, disease = "ebola")
+  res
+  plot(res)
+  plot(res, "lambdas")
+ 
+ }
Loading required package: incidence
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: plot ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: plotmo
Loading required package: plotrix
Loading required package: TeachingDemos
Error: package or namespace load failed for ‘earth’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/earth/libs/earth.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/earth/libs/earth.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘easyanova’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: ca
Loading required package: vegan
Loading required package: permute
Loading required package: lattice
Error: package or namespace load failed for ‘lattice’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘lattice’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘easyDes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Warning: namespace ‘rlang’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rlang’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rlang’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rlang’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rlang’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rlang’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rlang’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rlang’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
See chapter ‘System and foreign language interfaces’ in the ‘Writing R
Extensions’ manual.
Warning: namespace ‘rlang’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rlang’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rlang’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rlang’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rlang’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rlang’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rlang’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rlang’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Running examples in ‘easyformatr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: easy_format
> ### Title: Easily build format strings
> ### Aliases: easy_format
> 
> ### ** Examples
> 
> easy_format(year, month, day, integer, octal, double)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lazyeval/libs/lazyeval.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lazyeval/libs/lazyeval.so: failed to map segment from shared object
Calls: easy_format ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘easyformatr.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Non-standard files/directories found at top level:
  ‘easy_html_report_tmp_1376284934.59207.tsv’
  ‘easy_html_report_tmp_1376284935.5951.tsv’
  ‘easy_html_report_tmp_1376284936.59848.tsv’
Loading this package had a fatal error status code 1
Loading log:
Loading required package: base64enc
Error: package or namespace load failed for ‘base64enc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Error: package ‘base64enc’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EasyMARK’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: OpenMx
Error: package or namespace load failed for ‘OpenMx’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘OpenMx’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘easyNCDF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ncdf4/libs/ncdf4.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ncdf4/libs/ncdf4.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘easypackages’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘User_Input.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘easyreg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: sdcTable
Loading required package: stringr
Error: package or namespace load failed for ‘stringr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Error: package ‘stringr’ could not be loaded
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘easySVG_tutorial.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: SpecsVerification
Error: package or namespace load failed for ‘SpecsVerification’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘SpecsVerification’ could not be loaded
Execution halted
eb: no visible global function definition for ‘optimize’
ebalance: no visible global function definition for ‘var’
Undefined global functions or variables:
  optimize var
Consider adding
  importFrom("stats", "optimize", "var")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘eba’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EbayesThresh’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EBEN’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/EBEN/libs/EBEN.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/EBEN/libs/EBEN.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EBglmnet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/EBglmnet/libs/EBglmnet.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/EBglmnet/libs/EBglmnet.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: sads
Loading required package: bbmle
Loading required package: stats4
Error: package or namespace load failed for ‘bbmle’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘bbmle’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: separationplot
Loading required package: plyr
Error: package or namespace load failed for ‘plyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘plyr’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ebmc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so: failed to map segment from shared object
Execution halted
ebSNP: no visible global function definition for ‘optim’
Undefined global functions or variables:
  optim
Consider adding
  importFrom("stats", "optim")
to your NAMESPACE file.
Running examples in ‘ecb-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: convert_dates
> ### Title: Format date variable retrieved from the SDW into a proper date
> ###   variable
> ### Aliases: convert_dates
> 
> ### ** Examples
> 
> hicp <- get_data("ICP.M.U2.N.000000.4.ANR")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Calls: get_data ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘ecb_sdw.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ECctmc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: Ecfun
Error: package or namespace load failed for ‘Ecfun’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘Ecfun’ could not be loaded
Execution halted
Running examples in ‘ecdfHT-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ecdfHT.multivar
> ### Title: Multivariate extensions of transformed empirical cdf plot
> ### Aliases: ecdfHT.2d ecdfHT.2d.axes ecdfHT.multivar
> ###   ecdfHT.multivar.transform lp.norm
> 
> ### ** Examples
> 
> # independent components
> set.seed(2)
> x <- matrix( rcauchy(4000), ncol=4 )
> ecdfHT.multivar( x )
dev.new(): using pdf(file="Rplots1.pdf")
dev.new(): using pdf(file="Rplots2.pdf")
tail fit with radii.upper.tail.p= 0.9 
dev.new(): using pdf(file="Rplots3.pdf")
dev.new(): using pdf(file="Rplots4.pdf")
> 
> # radially symmetric
> r <- rcauchy(1000)
> theta <- runif(1000,min=0,max=2*pi)
> x <- cbind( r*cos(theta), r*sin(theta) )
> ecdfHT.multivar( x )
dev.new(): using pdf(file="Rplots5.pdf")
dev.new(): using pdf(file="Rplots6.pdf")
dev.new(): using pdf(file="Rplots7.pdf")
tail fit with radii.upper.tail.p= 0.9 
dev.new(): using pdf(file="Rplots8.pdf")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Calls: ecdfHT.multivar ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ecd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ECFsup’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Ecfun’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ECharts2Shiny’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘echarts4r’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Additional_Examples.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘echo.find’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/minpack.lm/libs/minpack.lm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/minpack.lm/libs/minpack.lm.so: failed to map segment from shared object
Execution halted
Running examples in ‘echogram-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: add.echogram
> ### Title: Add two echograms
> ### Aliases: add.echogram
> ### Keywords: array
> 
> ### ** Examples
> 
> # import 38 and 120 kHz data from an HAC file 
> hacfile <- system.file("hac", "D20150510-T202500.hac", package = "echogram")
> echo2.038 <- read.echogram(hacfile, channel = 1)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: read.echogram ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘echor’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ecipex’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/CHNOSZ/libs/CHNOSZ.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/CHNOSZ/libs/CHNOSZ.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: softImpute
Loading required package: Matrix
Error: package or namespace load failed for ‘Matrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘Matrix’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘eclust’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ecm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ecodist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ecodist/libs/ecodist.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ecodist/libs/ecodist.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ecoengine’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EcoGenetics’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: operators

Attaching package: ‘operators’

The following objects are masked from ‘package:base’:

    options, strrep

Loading required package: topmodel
Error: package or namespace load failed for ‘topmodel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/topmodel/libs/topmodel.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/topmodel/libs/topmodel.so: failed to map segment from shared object
Error: package ‘topmodel’ could not be loaded
Execution halted
Running examples in ‘EcoIndR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: DER
> ### Title: DIFFERENTIATING SAMPLES USING RARITY, HETEROGENEITY, EVENNESS,
> ###   TAXONOMIC, PHYLOGENETIC AND FUNCTIONAL DIVERSITY INDICES
> ### Aliases: DER
> ### Keywords: DER
> 
> ### ** Examples
> 
> 
> #An example without functional diversity
> 
> data(Rotifers)
> 
> DER(data=Rotifers, Samples=c("J1.1","K4.1","G3.1","F2.1","K2.2","F8.2","F8.1",
+ "F1.1","F4.1","J2.1","E5.1","H5.1","K3.2","E4.2","I6.1","K2.1","J5.1","I3.1",
+ "K3.3","G5.1","E6.1","J1.2","J6.1","G7.1","G6.1","G4.1","E3.1","E4.3","E2.1",
+ "H6.2","F7.1","J6.2"), Species="Species", Taxon=c("Class","Subclass",
+ "Superorder","Order","Family","Genus"), pos="Pos", Index=c("Rarity","Menhinick",
+ "McIntoshE", "Dstar") )
Warning in .local(occData, Qmax, Qmin, wMethods, rCutoff, normalised, assemblages,  :
  The cutoff cannot be equal to Qmin for mathematical reasons. Setting a cutoff slightly above Qmin (Qmin + .000000001).
Rarity cut-off point: 0.04166667 / 1 
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: DER ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rootSolve
Error: package or namespace load failed for ‘rootSolve’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rootSolve/libs/rootSolve.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rootSolve/libs/rootSolve.so: failed to map segment from shared object
Error: package ‘rootSolve’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ecolottery’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘ECoL-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: complexity
> ### Title: Extract the complexity measures from datasets
> ### Aliases: complexity complexity.default complexity.formula
> 
> ### ** Examples
> 
> ## Extract all complexity measures
> complexity(Species ~ ., iris)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so: failed to map segment from shared object
Calls: complexity ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EcoNetGen’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘econet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘econullnetr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: bipartite_stats
> ### Title: Test for significant differences in a range of network metrics
> ###   between the observed and null bipartite networks
> ### Aliases: bipartite_stats
> 
> ### ** Examples
> 
> set.seed(1234)
> sil.null <- generate_null_net(Silene[, 2:7], Silene.plants[, 2:6], sims = 10,
+                               c.samples = Silene[, 1],
+                               r.samples = Silene.plants[, 1])
[1] 1
[1] 2
[1] 3
[1] 4
[1] 5
[1] 6
[1] 7
[1] 8
[1] 9
[1] 10
> # Network-level analysis
> net.stats <- bipartite_stats(sil.null, index.type = "networklevel",
+                              indices = c("linkage density",
+                              "weighted connectance", "weighted nestedness",
+                              "interaction evenness"), intereven = "sum")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Calls: bipartite_stats ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘econullnetr-intro.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ecoseries’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ECOSolveR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ecospace’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ecotox’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: utility
Loading required package: rivernet
Loading required package: jpeg
Error: package or namespace load failed for ‘jpeg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jpeg/libs/jpeg.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jpeg/libs/jpeg.so: failed to map segment from shared object
Error: package ‘jpeg’ could not be loaded
Execution halted
Running examples in ‘ectotemp-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: bootstrap_E
> ### Title: Bootstrap thermoregulation effectiveness
> ### Aliases: bootstrap_E
> 
> ### ** Examples
> 
> te <- na.omit(bufbuf[,"te"])
> tb <- na.omit(bufbuf[,"tb"])
> E_bootstrapped <- bootstrap_E(te, tb,
+                              19.35, 26.44,
+                              'hertz',
+                              1000)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: bootstrap_E ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘eda4treeR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EDA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘edarf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: spc
Error: package or namespace load failed for ‘spc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spc/libs/spc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spc/libs/spc.so: failed to map segment from shared object
Error: package ‘spc’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘edci’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/edci/libs/edci.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/edci/libs/edci.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘edeaR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘edesign’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/edesign/libs/edesign.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/edesign/libs/edesign.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘edfReaderVignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘edfun.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘edgar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘edgarWebR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: cik_search
> ### Title: SEC CIK Search
> ### Aliases: cik_search
> 
> ### ** Examples
> 
> cik_search("cloudera")
Error in is.url(url) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Calls: cik_search ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Running ‘testthat.R’ [0s/0s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(httptest)
  Loading required package: testthat
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Error: package 'testthat' could not be loaded
  Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘edgarWebR.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘edgebundleR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: corpcor
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘editData’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EDMeasure’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: sm
Error: package or namespace load failed for ‘sm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sm/libs/sm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sm/libs/sm.so: failed to map segment from shared object
Error: package ‘sm’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘educineq’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘eechidna’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘eefAnalytics’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
geteegdata: no visible global function definition for ‘untar’
geteegdata: no visible global function definition for ‘read.table’
geteegdata: no visible global function definition for ‘write.csv’
geteegdata: no visible global function definition for ‘write.table’
Undefined global functions or variables:
  read.table untar write.csv write.table
Consider adding
  importFrom("utils", "read.table", "untar", "write.csv", "write.table")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: eegkitdata
Loading required package: bigsplines
Loading required package: quadprog
Error: package or namespace load failed for ‘quadprog’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Error: package ‘quadprog’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: emplik
Error: package or namespace load failed for ‘emplik’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘emplik’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EEM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘eemR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘eesim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EFAutilities’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EFDR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘effectR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘effectsizescr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: TAU
> ### Title: Parker's TAU-U
> ### Aliases: TAU
> 
> ### ** Examples
> 
> data=cbind(rnorm(16),1:16,c(rep(0,8),rep(1,8)))
> colnames(data)=c("DV","TIME","PHASE")
> TAU(data1=data,nameTime = "TIME",namePhase = "PHASE",
+ nameDV = "DV")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Kendall/libs/Kendall.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Kendall/libs/Kendall.so: failed to map segment from shared object
Calls: TAU ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: carData
Error: package or namespace load failed for ‘effects’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EffectStars2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/VGAM/libs/VGAM.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/VGAM/libs/VGAM.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: VGAM
Loading required package: stats4
Loading required package: splines
Error: package or namespace load failed for ‘VGAM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/VGAM/libs/VGAM.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/VGAM/libs/VGAM.so: failed to map segment from shared object
Error: package ‘VGAM’ could not be loaded
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘EfficientMaxEigenpair.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: readr
Error: package or namespace load failed for ‘readr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Error: package ‘readr’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EFS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘efts’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ega’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Package suggested but not available for checking: ‘eggCountsExtra’
Loading this package had a fatal error status code 1
Loading log:
Loading required package: gridExtra
Loading required package: ggplot2
Error: package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘ggplot2’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: parallel
Loading required package: btergm
Loading required package: xergm.common
Loading required package: ergm
Loading required package: network
Error: package or namespace load failed for ‘network’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/network/libs/network.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/network/libs/network.so: failed to map segment from shared object
Error: package ‘network’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EGRETci’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/binom/libs/binom.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/binom/libs/binom.so: failed to map segment from shared object
Execution halted
Running examples in ‘EGRET-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: makeAugmentedSample
> ### Title: Create randomized residuals and observations for data sets that
> ###   have some censored data
> ### Aliases: makeAugmentedSample
> ### Keywords: statistics water-quality
> 
> ### ** Examples
> 
> choptankAugmented <- makeAugmentedSample(Choptank_eList)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/truncnorm/libs/truncnorm.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/truncnorm/libs/truncnorm.so: failed to map segment from shared object
Calls: makeAugmentedSample ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Enhancements.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EHR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: eiPack
Error: package or namespace load failed for ‘eiPack’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘eiPack’ could not be loaded
Execution halted
eiginv: no visible global function definition for ‘runif’
Undefined global functions or variables:
  runif
Consider adding
  importFrom("stats", "runif")
to your NAMESPACE file.
boot_pr_comp: no visible global function definition for ‘cov’
boot_pr_comp: no visible global function definition for ‘quantile’
boot_pr_comp: no visible global function definition for ‘segments’
boot_pr_comp: no visible global function definition for ‘abline’
Undefined global functions or variables:
  abline cov quantile segments
Consider adding
  importFrom("graphics", "abline", "segments")
  importFrom("stats", "cov", "quantile")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘eikosograms’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: class
Error: package or namespace load failed for ‘class’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so: failed to map segment from shared object
Error: package ‘class’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘eiPack’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘eive’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘eiwild’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘eixport’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ncdf4/libs/ncdf4.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ncdf4/libs/ncdf4.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EL2Surv’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘elasticIsing’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘elastic’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Running examples in ‘elasticsearchr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: aggs
> ### Title: Define Elasticsearch aggregation.
> ### Aliases: aggs
> 
> ### ** Examples
> 
> avg_sepal_width_per_cat <- aggs('{"avg_sepal_width_per_cat": {
+       "terms": {"field": "species"},
+       "aggs": {"avg_sepal_width": {"avg": {"field": "sepal_width"}}}}
+ }')
Error in valid_json(json) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Calls: aggs ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘quick_start.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Found the following apparent S3 methods exported but not registered:
  print.audit.plan print.audit.plan.KM print.audit.plan.tri
  print.elec.data
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
CAST.calc.opt.cut: no visible global function definition for ‘points’
CAST.calc.opt.cut: no visible global function definition for ‘axis’
CAST.calc.sample: no visible global function definition for ‘uniroot’
KM.audit: no visible global function definition for ‘abline’
KM.audit: no visible global function definition for ‘points’
KM.audit: no visible global function definition for ‘segments’
KM.audit: no visible global function definition for ‘text’
find.stark.SRS.p: no visible global function definition for ‘phyper’
make.opt.packed.bad: no visible global function definition for ‘runif’
make.random.truth: no visible global function definition for ‘runif’
print.elec.data: no visible global function definition for ‘head’
simulateIt: no visible global function definition for ‘abline’
simulateIt: no visible global function definition for ‘points’
simulateIt: no visible global function definition for ‘segments’
simulateIt: no visible global function definition for ‘text’
stark.test.Z: no visible global function definition for ‘pbinom’
tri.audit.sim: no visible global function definition for ‘runif’
trinomial.bound: no visible global function definition for ‘contour’
trinomial.bound: no visible global function definition for ‘segments’
trinomial.bound: no visible global function definition for ‘points’
Undefined global functions or variables:
  abline axis contour head pbinom phyper points runif segments text
  uniroot
Consider adding
  importFrom("graphics", "abline", "axis", "contour", "points",
             "segments", "text")
  importFrom("stats", "pbinom", "phyper", "runif", "uniroot")
  importFrom("utils", "head")
to your NAMESPACE file.
Rd file 'KM.audit.Rd':
  \usage lines wider than 90 characters:
     KM.audit(data, U, Z, alpha = 0.25, plot = FALSE, debug = FALSE, return.Ps = FALSE, truncate.Ps = TRUE)

Rd file 'make.audit.Rd':
  \usage lines wider than 90 characters:
     make.audit(Z = NULL, method = c("tweak", "opt.bad", "opt.bad.WPM", "opt.bad.packed", "opt.bad.packed.WPM", "ok", "no error"), p_d = 0.2 ... [TRUNCATED]

Rd file 'make.opt.packed.bad.Rd':
  \usage lines wider than 90 characters:
     make.opt.packed.bad(Z, max.taint = 1, max.taint.good = max.taint, WPM = FALSE, add.good = 0, add.random = FALSE)

Rd file 'simulateIt.Rd':
  \usage lines wider than 90 characters:
     simulateIt(data, M = 50, alpha = 0.25, plot = FALSE, debug = FALSE, return.Ps = FALSE, truncate.Ps = TRUE)

These lines will be truncated in the PDF manual.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: elec
Error: package or namespace load failed for ‘elec.strat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/elec.strat/libs/elec.strat.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/elec.strat/libs/elec.strat.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘electionsBR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘electoral’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: msm
Error: package or namespace load failed for ‘msm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Error: package ‘msm’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘elementR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘introduction_to_elevatr.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘elhmc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Running examples in ‘ellipse-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ellipse.profile.glm
> ### Title: Pairwise profile sketch for GLM profiles
> ### Aliases: ellipse.profile.glm
> ### Keywords: dplot models
> 
> ### ** Examples
> 
> ## MASS has a pairs.profile function that conflicts with ours, so
> ## do a little trickery here
> 	 noMASS <- is.na(match('package:MASS', search()))
> 	 if (noMASS) require(MASS)
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
> 
> ## Dobson (1990) Page 93: Randomized Controlled Trial :
> 
>      counts <- c(18,17,15,20,10,20,25,13,12)
>      outcome <- gl(3,1,9)
>      treatment <- gl(3,3)
>      glm.D93 <- glm(counts ~ outcome + treatment, family=poisson())
> 
> ##  Plot an approximate 95% confidence region for the two outcome variables
>      prof.D93 <- profile(glm.D93)
Warning: namespace ‘MASS’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
>      plot(ellipse(prof.D93, which = 2:3), type = 'l')
>      lines(ellipse(glm.D93, which = 2:3), lty = 2)
>      params <- glm.D93$coefficients
>      points(params[2],params[3])
>      
> ##  Clean up our trickery
> 	 if (noMASS) detach('package:MASS')
Error in detach("package:MASS") : invalid 'name' argument
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ellipsis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ellipsis/libs/ellipsis.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ellipsis/libs/ellipsis.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘elliptic’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: KernelKnn
Error: package or namespace load failed for ‘KernelKnn’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘KernelKnn’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EloChoice’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EloOptimized’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘elo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/EL/libs/EL.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/EL/libs/EL.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: kinship2
Loading required package: Matrix
Error: package or namespace load failed for ‘Matrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘Matrix’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: locfit
Error: package or namespace load failed for ‘locfit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘locfit’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ELYP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EMA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Biobase/libs/Biobase.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Biobase/libs/Biobase.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EMAtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EMbC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: recipes
Loading required package: dplyr
Error: package or namespace load failed for ‘dplyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Error: package ‘dplyr’ could not be loaded
Execution halted
Non-standard file/directory found at top level:
  ‘etc’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘emdbook’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘emdi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘emdist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/emdist/libs/emdist.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/emdist/libs/emdist.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: fields
Loading required package: spam
Loading required package: dotCall64
Error: package or namespace load failed for ‘dotCall64’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so: failed to map segment from shared object
Error: package ‘dotCall64’ could not be loaded
Execution halted
Running examples in ‘emhawkes-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: hfit
> ### Title: Perform Maximum Likelihood Estimation
> ### Aliases: hfit hfit,hspec-method
> 
> ### ** Examples
> 
> 
> # example 1
> mu <- c(0.1, 0.1)
> alpha <- matrix(c(0.2, 0.1, 0.1, 0.2), nrow=2, byrow=TRUE)
> beta <- matrix(c(0.9, 0.9, 0.9, 0.9), nrow=2, byrow=TRUE)
> h <- new("hspec", mu=mu, alpha=alpha, beta=beta)
> res <- hsim(h, size=100)
Warning in hsim(h, size = 100) :
  The initial values for intensity processes are not provided. Internally determined initial values are used.

> summary(hfit(h, res$inter_arrival, res$type))
Warning in hfit(h, res$inter_arrival, res$type) :
  The initial values for intensity processes are not provided. Internally determined initial values are used.

     mu1 alpha1,1 alpha1,2  beta1,1 
     0.1      0.2      0.1      0.9 
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: summary ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘example.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘emil’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: pscl
Error: package or namespace load failed for ‘pscl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘pscl’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EmissV’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EML’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: GPArotation
Loading required package: limSolve
Error: package or namespace load failed for ‘limSolve’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lpSolve/libs/lpSolve.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lpSolve/libs/lpSolve.so: failed to map segment from shared object
Error: package ‘limSolve’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: earth
Loading required package: plotmo
Loading required package: plotrix
Loading required package: TeachingDemos
Error: package or namespace load failed for ‘earth’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/earth/libs/earth.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/earth/libs/earth.so: failed to map segment from shared object
Error: package ‘earth’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: reshape
Error: package or namespace load failed for ‘reshape’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘reshape’ could not be loaded
Execution halted
Package which this enhances but not available for checking: ‘glmmADMB’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘emmeans’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EMMIXcskew’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EMMIXgene’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EMMIXmfa’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/EMMIXmfa/libs/EMMIXmfa.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/EMMIXmfa/libs/EMMIXmfa.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EMMIXskew’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Running ‘test-all.R’ [0s/0s]
Running the tests in ‘tests/test-all.R’ failed.
Complete output:
  > Sys.setenv("R_TESTS" = "")
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘emoa’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/emoa/libs/emoa.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/emoa/libs/emoa.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘emojifont’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘emon’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘EmpiricalCalibration-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plotCalibration
> ### Title: Create a calibration plot
> ### Aliases: plotCalibration
> 
> ### ** Examples
> 
> data(sccs)
> negatives <- sccs[sccs$groundTruth == 0, ]
> plotCalibration(negatives$logRr, negatives$seLogRr)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: plotCalibration ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘EmpiricalCiCalibrationVignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...

Error: processing vignette ‘empirical.Rnw’ failed with diagnostics:
 chunk 2 
Error : package or namespace load failed for ‘fclust’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘emplik’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EMSHS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘emstreeR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
ExactMultinomialTest: no visible global function definition for
  ‘dmultinom’
ExactMultinomialTest : <anonymous>: no visible global function
  definition for ‘dmultinom’
ExactMultinomialTestChisquare : <anonymous>: no visible global function
  definition for ‘dmultinom’
MonteCarloMultinomialTest: no visible global function definition for
  ‘rmultinom’
MonteCarloMultinomialTest: no visible global function definition for
  ‘flush.console’
MonteCarloMultinomialTestChisquare: no visible global function
  definition for ‘rmultinom’
MonteCarloMultinomialTestChisquare: no visible global function
  definition for ‘flush.console’
multinomial.test: no visible global function definition for
  ‘flush.console’
plotMultinom: no visible global function definition for ‘barplot’
plotMultinom: no visible global function definition for ‘mtext’
Undefined global functions or variables:
  barplot dmultinom flush.console mtext rmultinom
Consider adding
  importFrom("graphics", "barplot", "mtext")
  importFrom("stats", "dmultinom", "rmultinom")
  importFrom("utils", "flush.console")
to your NAMESPACE file.
Rd file 'EMT-internal.Rd':
  \usage lines wider than 90 characters:
     MonteCarloMultinomialTestChisquare(observed, prob, size, groups, numEvents, ntrial, atOnce)

Rd file 'multinomial.test.Rd':
  \usage lines wider than 90 characters:
     multinomial.test(observed, prob, useChisq = FALSE, MonteCarlo = FALSE, ntrial = 100000, atOnce = 1000000)
  \examples lines wider than 100 characters:
     observed <- c(5,2,1)            # observed data: 5 items in category one, 2 items in category two, 1 item in category three
     prob <- c(0.25, 0.5, 0.25)      # model: hypothetical probability that an item falls into category one, two, or three
     ## Test the hypothesis that all sides of a dice pop up with the same probability (a 6-dimesional problem):
     prob <- c(pdice, pdice, pdice, pdice, pdice, pdice)     # the model, determined by the hypothetical probabilities
     observed <- c(4, 5, 2, 7, 0, 1)                         # the observation consisting of 19 throws ( = sample size)

These lines will be truncated in the PDF manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘emuR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EMVS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘enaR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lpSolve/libs/lpSolve.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lpSolve/libs/lpSolve.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EncDNA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/S4Vectors/libs/S4Vectors.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/S4Vectors/libs/S4Vectors.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘enc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/enc/libs/enc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/enc/libs/enc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘endogenous’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘endogMNP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/endogMNP/libs/endogMNP.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/endogMNP/libs/endogMNP.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: parallel
Loading required package: energy
Error: package or namespace load failed for ‘energy’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘energy’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘energy’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘energyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/png/libs/png.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/png/libs/png.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘enetLTS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘eNetXplorer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘engsoccerdata-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: alltimerecord
> ### Title: Get a team's all-time record
> ### Aliases: alltimerecord
> 
> ### ** Examples
> 
> alltimerecord(england, "Aston Villa")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: alltimerecord ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: dismo
Loading required package: raster
Loading required package: sp
Error: package or namespace load failed for ‘sp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘sp’ could not be loaded
Execution halted
Non-standard file/directory found at top level:
  ‘CHANGES.txt’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘enpls’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘enrichR’:
 .onLoad failed in loadNamespace() for ‘rjson’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rjson/libs/rjson.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rjson/libs/rjson.so: failed to map segment from shared object
Execution halted
Deprecated license: BSD
Checking should be performed on sources prepared by ‘R CMD build’.
matplot_enrichment_curve: no visible global function definition for
  ‘plot’
matplot_enrichment_curve: no visible global function definition for
  ‘lines’
matplot_enrichment_curve: no visible global function definition for
  ‘legend’
plot_enrichment_curve: no visible global function definition for ‘plot’
plot_enrichment_curve: no visible global function definition for
  ‘lines’
plot_enrichment_curve: no visible global function definition for
  ‘plot.xy’
plot_enrichment_curve: no visible global function definition for
  ‘xy.coords’
plot_enrichment_curve: no visible global function definition for
  ‘rainbow’
plot_enrichment_curve: no visible global function definition for
  ‘axTicks’
plot_enrichment_curve: no visible global function definition for ‘rect’
plot_enrichment_curve: no visible global function definition for ‘axis’
plot_enrichment_curve_xlog: no visible global function definition for
  ‘plot’
plot_enrichment_curve_xlog: no visible global function definition for
  ‘lines’
plot_enrichment_curve_xlog: no visible global function definition for
  ‘plot.xy’
plot_enrichment_curve_xlog: no visible global function definition for
  ‘xy.coords’
plot_enrichment_curve_xlog: no visible global function definition for
  ‘rainbow’
plot_enrichment_curve_xlog: no visible global function definition for
  ‘axTicks’
plot_enrichment_curve_xlog: no visible global function definition for
  ‘rect’
plot_enrichment_curve_xlog: no visible global function definition for
  ‘axis’
Undefined global functions or variables:
  axTicks axis legend lines plot plot.xy rainbow rect xy.coords
Consider adding
  importFrom("grDevices", "rainbow", "xy.coords")
  importFrom("graphics", "axTicks", "axis", "legend", "lines", "plot",
             "plot.xy", "rect")
to your NAMESPACE file.
Error in re-building vignettes:
  ...
Error: processing vignette ‘GLMs.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: dendextend
Error: package or namespace load failed for ‘dendextend’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘dendextend’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: kknn
Error: package or namespace load failed for ‘kknn’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘kknn’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: EnsembleBase
Loading required package: kknn
Error: package or namespace load failed for ‘kknn’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘kknn’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ensembleEN’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: ensembleBMA
Loading required package: chron
Error: package or namespace load failed for ‘chron’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/chron/libs/chron.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/chron/libs/chron.so: failed to map segment from shared object
Error: package ‘chron’ could not be loaded
Execution halted
Running examples in ‘ensembleR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ensemble
> ### Title: Perform Ensemble modelling using Caret Package.
> ### Aliases: ensemble
> 
> ### ** Examples
> 
> data(iris)
> preds <- ensemble(iris[1:125,],iris[125:150,],'Species',c('treebag','rpart'),'rpart')
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: ensemble ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Introduction_to_ensembleR.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘ensurer.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘entropart’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EntropyEstimation’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/EntropyEstimation/libs/EntropyEstimation.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/EntropyEstimation/libs/EntropyEstimation.so: failed to map segment from shared object
Execution halted
diffcv: no visible global function definition for ‘sd’
diffcvall: no visible global function definition for ‘sd’
diffcvall: no visible global function definition for ‘fligner.test’
diffcvall: no visible global function definition for ‘p.adjust’
diffcvpFK: no visible global function definition for ‘fligner.test’
diffcvpFK: no visible global function definition for ‘p.adjust’
diffexp: no visible global function definition for ‘var’
diffexp: no visible global function definition for ‘t.test’
diffexp: no visible global function definition for ‘p.adjust’
diffexp2: no visible global function definition for ‘var’
diffexp2: no visible global function definition for ‘t.test’
diffexp2: no visible global function definition for ‘p.adjust’
diffnsepperm: no visible global function definition for ‘p.adjust’
diffseall: no visible global function definition for ‘p.adjust’
Undefined global functions or variables:
  fligner.test p.adjust sd t.test var
Consider adding
  importFrom("stats", "fligner.test", "p.adjust", "sd", "t.test", "var")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘envalysis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Running ‘test_envDocument.R’ [0s/0s]
  Running ‘testthat.R’ [0s/0s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > Sys.setenv("R_TESTS" = "")
  > 
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘envDocument-vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: parallel
Loading required package: modeest
Error: package or namespace load failed for ‘modeest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Error: package ‘modeest’ could not be loaded
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘GCMSDA.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘enviPat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/enviPat/libs/enviPat.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/enviPat/libs/enviPat.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EnviroPRA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EnviroStat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: aster
Loading required package: trust
Error: package or namespace load failed for ‘aster’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/aster/libs/aster.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/aster/libs/aster.so: failed to map segment from shared object
Error: package ‘aster’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘envnames’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/envnames/libs/envnames.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/envnames/libs/envnames.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: IDPmisc
Error: package or namespace load failed for ‘IDPmisc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘IDPmisc’ could not be loaded
Execution halted
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
See section ‘Generic functions and methods’ in the ‘Writing R
Extensions’ manual.
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
See chapter ‘System and foreign language interfaces’ in the ‘Writing R
Extensions’ manual.
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
Running examples in ‘EnvStats-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: Benthic.df
> ### Title: Benthic Data from Monitoring Program in Chesapeake Bay
> ### Aliases: Benthic.df
> ### Keywords: datasets
> 
> ### ** Examples
> 
>   attach(Benthic.df)
> 
>   # Show station locations
>   #-----------------------
>   dev.new()
>   plot(Longitude, Latitude, 
+       xlab = "-Longitude (Degrees West)",
+       ylab = "Latitude",
+       main = "Sampling Station Locations")
> 
> 
>   # Scatterplot matrix of benthic index, salinity, and silt
>   #--------------------------------------------------------
>   dev.new()
dev.new(): using pdf(file="Rplots1.pdf")
>   pairs(~ Index + Salinity + Silt, data = Benthic.df)
> 
> 
>   # Contour and perspective plots based on loess fit
>   # showing only predicted values within the convex hull
>   # of station locations
>   #-----------------------------------------------------
>   library(sp)
Error: package or namespace load failed for ‘sp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sp/libs/sp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sp/libs/sp.so: failed to map segment from shared object
Execution halted
'library' or 'require' call to ‘plotrix’ which was already attached by Depends.
  Please remove these calls from your code.
'library' or 'require' calls in package code:
  ‘Hmisc’ ‘survival’
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Package in Depends field not imported from: ‘plotrix’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
There are ::: calls to the package's namespace in its code. A package
  almost never needs to use ::: for its own objects:
  ‘a.alpha.ade’ ‘a.coladd.ade’ ‘a.getcol.ade’ ‘a.glc’
Rd file 'scatter.ade.Rd':
  \examples lines wider than 100 characters:
     scatter.ade(x, y, g, z, vnames=c("blue","red"), alpha=0.25, xlim=c(-5, 5), zticks=c(1, 2, 3, 4, 5), wall=3)

These lines will be truncated in the PDF manual.
Running examples in ‘epade-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: KM.plot.ade
> ### Title: Kaplan-Meier curves
> ### Aliases: KM.plot.ade
> ### Keywords: Kaplan-Meier
> 
> ### ** Examples
> 
> times<-  sort(abs(rnorm(1000)))
> events<- round(runif(1000))
> groups<- round(runif(1000, 0, 3))
> KM.plot.ade(times, events,  groups, wall=2)
Error: package or namespace load failed for ‘survival’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/survival/libs/survival.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/survival/libs/survival.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Vignette_epandist.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘epanet2toolkit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/epanet2toolkit/libs/epanet2toolkit.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/epanet2toolkit/libs/epanet2toolkit.so: failed to map segment from shared object
Execution halted
Running ‘testthat.r’ [0s/0s]
Running the tests in ‘tests/testthat.r’ failed.
Complete output:
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ePCR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EpiBayes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘epicontacts’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EpiContactTrace’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/EpiContactTrace/libs/EpiContactTrace.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/EpiContactTrace/libs/EpiContactTrace.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘epidata’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EpiDynamics’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/deSolve/libs/deSolve.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/deSolve/libs/deSolve.so: failed to map segment from shared object
Execution halted
Non-standard file/directory found at top level:
  ‘sync.x64.ffs_db’
DiscrSI : CDFGamma: no visible global function definition for ‘pgamma’
EstimateR : SampleFromPosterior : <anonymous>: no visible global
  function definition for ‘rgamma’
EstimateR: no visible global function definition for ‘rnorm’
EstimateR: no visible binding for global variable ‘sd’
EstimateR: no visible binding for global variable ‘quantile’
EstimateR: no visible binding for global variable ‘median’
EstimateR: no visible global function definition for ‘qgamma’
EstimateR: no visible global function definition for ‘par’
EstimateR: no visible global function definition for ‘title’
EstimateR: no visible global function definition for ‘polygon’
EstimateR: no visible global function definition for ‘lines’
EstimateR: no visible global function definition for ‘legend’
EstimateR: no visible global function definition for ‘hist’
WT : DrawOneSetOfAncestries: no visible global function definition for
  ‘rmultinom’
WT: no visible binding for global variable ‘quantile’
WT: no visible binding for global variable ‘sd’
WT: no visible global function definition for ‘par’
WT: no visible global function definition for ‘segments’
WT: no visible global function definition for ‘points’
WT: no visible global function definition for ‘lines’
WT: no visible global function definition for ‘legend’
Undefined global functions or variables:
  hist legend lines median par pgamma points polygon qgamma quantile
  rgamma rmultinom rnorm sd segments title
Consider adding
  importFrom("graphics", "hist", "legend", "lines", "par", "points",
             "polygon", "segments", "title")
  importFrom("stats", "median", "pgamma", "qgamma", "quantile", "rgamma",
             "rmultinom", "rnorm", "sd")
to your NAMESPACE file.
Rd file 'Flu1918.Rd':
  \examples lines wider than 100 characters:
                     # the estimate of the instantaneous reproduction number over the 7-day window finishing on that day.

Rd file 'Flu2009.Rd':
  \examples lines wider than 100 characters:
                     # the estimate of the instantaneous reproduction number over the 7-day window finishing on that day.

Rd file 'Measles1861.Rd':
  \examples lines wider than 100 characters:
                     EstimateR(Measles1861$Incidence, T.Start=17:42, T.End=23:48, method="NonParametricSI", 
                     # the estimate of the instantaneous reproduction number over the 7-day window finishing on that day.

Rd file 'SARS2003.Rd':
  \examples lines wider than 100 characters:
                     EstimateR(SARS2003$Incidence, T.Start=14:101, T.End=20:107, method="NonParametricSI", 
                     # the estimate of the instantaneous reproduction number over the 7-day window finishing on that day.

Rd file 'Smallpox1972.Rd':
  \examples lines wider than 100 characters:
                     EstimateR(Smallpox1972$Incidence, T.Start=27:51, T.End=33:57, method="NonParametricSI", 
                     # the estimate of the instantaneous reproduction number over the 7-day window finishing on that day.

These lines will be truncated in the PDF manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘epiflows’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘epinet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/epinet/libs/epinet.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/epinet/libs/epinet.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘epiphy’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Epi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘EpiReport-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: filterDisease
> ### Title: Filter disease parameters
> ### Aliases: filterDisease
> 
> ### ** Examples
> 
> disease <- "SALM"
> reportParameters <- EpiReport::AERparams
> reportParameters <- filterDisease(disease, reportParameters)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: filterDisease ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘EpiReport_Vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘episcan.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘episensr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘episheet-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: pvalueplot
> ### Title: Plot the p-value function
> ### Aliases: pvalueplot
> ### Keywords: R Rothman episheet pvalues
> 
> ### ** Examples
> 
> pvalueplot(
+   est1.ll = 0.9,
+   est1.ul = 12,
+   xlabel = "Relative Risk"
+ )
Confidence interval type is  95%CI
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: pvalueplot ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘pvalueplot.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘EpiSignalDetection-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: aggAtlasExport
> ### Title: Aggregate filtered final Atlas export
> ### Aliases: aggAtlasExport
> 
> ### ** Examples
> 
> #-- Setting the parameters to run the report for
> input <- list(
+ disease = "Salmonellosis",
+ country = "EU-EEA - complete series",
+ indicator = "Reported cases",
+ stratification = "Confirmed cases",
+ unit = "Month",
+ daterange = c("2010-01-01", "2016-12-31"),
+ algo = "FarringtonFlexible",
+ testingperiod = 5
+ )
> 
> #-- Example dataset
> dataset <- EpiSignalDetection::SignalData
> 
> #-- Filtering on declared input parameters
> dataset <- filterAtlasExport(dataset, input)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: filterAtlasExport ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘EpiSignalDetection_Vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  motor_param.cpp:257:5: warning: explicitly assigning value of variable of type 'arma::vec' (aka 'Col<double>') to itself [-Wself-assign-overloaded]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/episode.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘episode’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: epiR
Loading required package: survival
Error: package or namespace load failed for ‘survival’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘survival’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘epitab’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Running examples in ‘epitrix-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: clean_labels
> ### Title: Standardise labels
> ### Aliases: clean_labels
> 
> ### ** Examples
> 
> 
> clean_labels("-_-This is; A    WeÏrD**./sêntënce...")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: clean_labels ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘epitrix.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
FCIplot: no visible global function definition for ‘na.omit’
FCIplot: no visible global function definition for ‘plot’
FCIplot: no visible global function definition for ‘tail’
FCIplot: no visible global function definition for ‘grid’
FCIplot: no visible global function definition for ‘polygon’
FCIplot: no visible global function definition for ‘rgb’
linpred: no visible global function definition for ‘lm’
mplott: no visible global function definition for ‘par’
mplott: no visible global function definition for ‘plot’
mplott: no visible global function definition for ‘na.omit’
mplott: no visible global function definition for ‘lines’
mplott: no visible global function definition for ‘legend’
mplott: no visible global function definition for ‘grid’
plott: no visible global function definition for ‘lines’
plott: no visible global function definition for ‘par’
plott: no visible global function definition for ‘plot’
plott: no visible global function definition for ‘grid’
tsideplot: no visible global function definition for ‘par’
tsideplot: no visible global function definition for ‘plot’
tsideplot: no visible global function definition for ‘axis’
tsideplot: no visible global function definition for ‘grid’
Undefined global functions or variables:
  axis grid legend lines lm na.omit par plot polygon rgb tail
Consider adding
  importFrom("grDevices", "rgb")
  importFrom("graphics", "axis", "grid", "legend", "lines", "par",
             "plot", "polygon")
  importFrom("stats", "lm", "na.omit")
  importFrom("utils", "tail")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘eplusr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘eply.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: lassoshooting
Error: package or namespace load failed for ‘lassoshooting’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lassoshooting/libs/lassoshooting.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lassoshooting/libs/lassoshooting.so: failed to map segment from shared object
Error: package ‘lassoshooting’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘epos’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘epr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘epubr.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: ttutils
Error: package or namespace load failed for ‘EQL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Non-standard files/directories found at top level:
  ‘docs’ ‘license.txt’ ‘status.txt’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘equalCovs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/equalCovs/libs/equalCovs.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/equalCovs/libs/equalCovs.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  utilities.c:175:32: warning: using floating point absolute value function 'fabs' when argument is of integer type [-Wabsolute-value]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/Equalden.HD.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Equalden.HD’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Equalden.HD/libs/Equalden.HD.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Equalden.HD/libs/Equalden.HD.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘equateIRT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/statmod/libs/statmod.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/statmod/libs/statmod.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: equateIRT
Error: package or namespace load failed for ‘equateIRT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/statmod/libs/statmod.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/statmod/libs/statmod.so: failed to map segment from shared object
Error: package ‘equateIRT’ could not be loaded
Execution halted
The following files contain a license that requires
distribution of original sources:
  ‘upgreek.sty’
Please ensure that you have complied with it.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: BiasedUrn
Error: package or namespace load failed for ‘BiasedUrn’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BiasedUrn/libs/BiasedUrn.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BiasedUrn/libs/BiasedUrn.so: failed to map segment from shared object
Error: package ‘BiasedUrn’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘equSA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: statnet.common
Error: package or namespace load failed for ‘statnet.common’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘statnet.common’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘erhcv’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘eRm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ERP’:
 .onLoad failed in loadNamespace() for ‘mnormt’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘working-with-errorist.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘errorize.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: validate
Error: package or namespace load failed for ‘validate’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/yaml/libs/yaml.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/yaml/libs/yaml.so: failed to map segment from shared object
Error: package ‘validate’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ERSA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘esaBcv’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/svd/libs/svd.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/svd/libs/svd.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘esaddle’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘esaps-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: enp
> ### Title: Effective Number of Parties
> ### Aliases: enp
> 
> ### ** Examples
> 
> votes <- list(data.frame(country = rep("ARG", 3),
+                          year = c(1995, 2000, 2005),
+                          party_A = c(40,10,20),
+                          party_B = c(35,20,40),
+                          party_C = c(25,70,40)),
+               data.frame(country = rep("URY", 4),
+                          year = c(1995, 2000, 2005, 2010),
+                          party_A = c(30,30,20,20),
+                          party_B = c(30,50,40, 30),
+                          party_C = c(30,10,30, 25),
+                          party_D = c(10,10,10,25)),
+               data.frame(country = rep("BRA", 2),
+                          year = c(1993, 1998),
+                          party_A = c(30, 55),
+                          party_B = c(70, 45)))
> 
> votes <- esaps_object(dataset = votes, name.country = "country", name.year = "year")
> en_party <- enp(votes, summary = TRUE)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: enp ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘esc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘eseis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Non-standard file/directory found at top level:
  ‘ESG-Ex.R’
rAllRisksFactors: no visible global function definition for ‘new’
rAssetDistribution: no visible global function definition for ‘new’
rDefaultSpread: no visible global function definition for ‘new’
rLiquiditySpread: no visible global function definition for ‘new’
rRealEstate: no visible global function definition for ‘new’
rShortRate: no visible global function definition for ‘new’
rStock: no visible global function definition for ‘new’
EuroCall_Stock_PriceDistribution,Scenarios: no visible global function
  definition for ‘pnorm’
EuroCall_ZC_PriceDistribution,Scenarios: no visible global function
  definition for ‘pnorm’
EuroPut_Stock_PriceDistribution,Scenarios: no visible global function
  definition for ‘pnorm’
EuroPut_ZC_PriceDistribution,Scenarios: no visible global function
  definition for ‘pnorm’
MartingaleTest,Scenarios: no visible global function definition for
  ‘plot’
MartingaleTest,Scenarios: no visible global function definition for
  ‘lines’
MartingaleTest,Scenarios: no visible global function definition for
  ‘title’
customPathsGeneration,Scenarios: no visible global function definition
  for ‘rnorm’
Undefined global functions or variables:
  lines new plot pnorm rnorm title
Consider adding
  importFrom("graphics", "lines", "plot", "title")
  importFrom("methods", "new")
  importFrom("stats", "pnorm", "rnorm")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Loading this package had a fatal error status code 1
Loading log:
Loading required package: CDVine
Error: package or namespace load failed for ‘CDVine’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘CDVine’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘eshrink’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ESKNN’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘esmisc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘esmprep’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘esquisse’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
cv.ES: no visible binding for global variable ‘var’
Undefined global functions or variables:
  var
Consider adding
  importFrom("stats", "var")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘esreg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘essHist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘essurvey-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: show_countries
> ### Title: Return available countries in the European Social Survey
> ### Aliases: show_countries
> 
> ### ** Examples
> 
> 
> show_countries()
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Calls: show_countries ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘intro_ess.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘estatapi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ESTER’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EstimateGroupNetwork’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘estimatr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EstMix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
There are ::: calls to the package's namespace in its code. A package
  almost never needs to use ::: for its own objects:
  ‘estoutstorage’
descsto: no visible global function definition for ‘is’
Undefined global functions or variables:
  is
Consider adding
  importFrom("methods", "is")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Running examples in ‘estprod-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: levinsohn_petrin
> ### Title: Levinsohn-Petrin Estimation of Production Functions
> ### Aliases: levinsohn_petrin
> 
> ### ** Examples
> 
> data(estprod_data)
> levinsohn_petrin(data = estprod_data, var1 ~ var2 | var3 | var4, 
+ exit = ~exit, id = "id", time = "year", bootstrap = TRUE)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/minpack.lm/libs/minpack.lm.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/minpack.lm/libs/minpack.lm.so: failed to map segment from shared object
Calls: levinsohn_petrin ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
.Transition: no visible global function definition for ‘rnorm’
.Transition.DC: no visible global function definition for ‘runif’
CondPdf.CC.interval: no visible global function definition for ‘plot’
CondPdf.DC.interval: no visible global function definition for ‘plot’
Simu.Cond.HR: no visible global function definition for ‘rpois’
Simu.Cond.HR: no visible global function definition for ‘runif’
Simu.Cond.HR: no visible global function definition for ‘hist’
Simu.Cond.HR: no visible global function definition for ‘var’
Simu.HR: no visible global function definition for ‘rpois’
Simu.HR: no visible global function definition for ‘runif’
Simu.HR: no visible global function definition for ‘hist’
Simu.HR: no visible global function definition for ‘var’
Simu.PDMP: no visible global function definition for ‘plot’
Simu.PDMP.DC: no visible global function definition for ‘plot’
plotCHR: no visible global function definition for ‘plot’
plotHR: no visible global function definition for ‘plot’
Undefined global functions or variables:
  hist plot rnorm rpois runif var
Consider adding
  importFrom("graphics", "hist", "plot")
  importFrom("stats", "rnorm", "rpois", "runif", "var")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘estudy2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: xtable
Loading required package: Hmisc
Loading required package: lattice
Error: package or namespace load failed for ‘lattice’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘lattice’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: mapdata
Loading required package: maps
Error: package or namespace load failed for ‘maps’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/maps/libs/maps.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/maps/libs/maps.so: failed to map segment from shared object
Error: package ‘maps’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ETC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ether’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EthSEQ’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geometry/libs/geometry.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geometry/libs/geometry.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘etma.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘etm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘etseed’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘eulerian’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/graph/libs/BioC_graph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/graph/libs/BioC_graph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘eulerr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘europepmc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘eurostat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tfplot
Loading required package: tframe
Loading required package: dse
Error: package or namespace load failed for ‘dse’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dse/libs/dse.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dse/libs/dse.so: failed to map segment from shared object
Error: package ‘dse’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘evaluator’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EValue’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘eva’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘evclass’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FNN/libs/FNN.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FNN/libs/FNN.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘evclust’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FNN/libs/FNN.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FNN/libs/FNN.so: failed to map segment from shared object
Execution halted
powerSet : <anonymous>: no visible global function definition for
  ‘combn’
Undefined global functions or variables:
  combn
Consider adding
  importFrom("utils", "combn")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘evdbayes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/evdbayes/libs/evdbayes.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/evdbayes/libs/evdbayes.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘evd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/evd/libs/evd.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/evd/libs/evd.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘eventdataR.rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EventDetectR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘eventInterval’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rmutil
Error: package or namespace load failed for ‘rmutil’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rmutil/libs/rmutil.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rmutil/libs/rmutil.so: failed to map segment from shared object
Error: package ‘rmutil’ could not be loaded
Execution halted
Non-standard file/directory found at top level:
  ‘TODO.md’
make_dyads : ff: no visible global function definition for ‘aggregate’
make_scale: no visible global function definition for ‘read.csv’
plot_dyad: no visible global function definition for ‘is’
read_eventdata : read_ed_file: no visible global function definition
  for ‘read.csv’
Undefined global functions or variables:
  aggregate is read.csv
Consider adding
  importFrom("methods", "is")
  importFrom("stats", "aggregate")
  importFrom("utils", "read.csv")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Loading this package had a fatal error status code 1
Loading log:
Loading required package: ProfileLikelihood
Loading required package: nlme
Error: package or namespace load failed for ‘nlme’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘nlme’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘evobiR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: plyr
Error: package or namespace load failed for ‘plyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘plyr’ could not be loaded
Execution halted
Running examples in ‘EvolutionaryGames-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: BNN
> ### Title: Brown-von Neumann-Nash dynamic
> ### Aliases: BNN
> 
> ### ** Examples
> 
> dynamic <- BNN
> A <- matrix(c(0, -2, 1, 1, 0, -2, -2, 1, 0), 3, byrow=TRUE)
> state <- matrix(c(0.4, 0.3, 0.3), 1, 3, byrow=TRUE)
> phaseDiagram3S(A, dynamic, NULL, state, FALSE, FALSE)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: phaseDiagram3S ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘UsingEvolutionaryGames.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
evolvabilityBetaMCMC : <anonymous>: no visible binding for global
  variable ‘median’
evolvabilityBetaMCMC: no visible binding for global variable ‘median’
evolvabilityBetaMCMC2: no visible binding for global variable ‘median’
evolvabilityMeans: no visible global function definition for ‘var’
evolvabilityMeansMCMC : <anonymous>: no visible global function
  definition for ‘var’
evolvabilityMeansMCMC: no visible binding for global variable ‘median’
randomBeta: no visible global function definition for ‘rnorm’
Undefined global functions or variables:
  median rnorm var
Consider adding
  importFrom("stats", "median", "rnorm", "var")
to your NAMESPACE file.
Running examples in ‘evolvability-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: evolvabilityBetaMCMC
> ### Title: Calculate posterior distribution of evolvability parameters from
> ###   a set of selection gradients
> ### Aliases: evolvabilityBetaMCMC
> ### Keywords: array algebra multivariate
> 
> ### ** Examples
> 
> # Simulating a posterior distribution 
> # (or bootstrap distribution) of a G-matrix:
> G = matrix(c(1, 1, 0, 1, 4, 1, 0, 1, 2), ncol = 3)
> G_mcmc = sapply(c(G), function(x) rnorm(10, x, 0.01)) 
> G_mcmc = t(apply(G_mcmc, 1, function(x){
+   G = matrix(x, ncol=sqrt(length(x)))
+   G[lower.tri(G)] = t(G)[lower.tri(G)]
+   c(G)
+ }))
> 
> # Simulating a posterior distribution 
> # (or bootstrap distribution) of trait means:
> means = c(1, 1.4, 2.1)
> means_mcmc = sapply(means, function(x) rnorm(10, x, 0.01)) 
> 
> # Mean standardizing the G-matrix:
> G_mcmc = meanStdGMCMC(G_mcmc, means_mcmc)
> 
> # Generating selection gradients in five random directions:
> Beta = randomBeta(5, 3) 
> 
> # Calculating evolvability parameters:
> x = evolvabilityBetaMCMC(G_mcmc, Beta, post.dist=TRUE)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: evolvabilityBetaMCMC ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Evomorph’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rrepast
Loading required package: rJava
Error: package or namespace load failed for ‘rJava’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Error: package ‘rJava’ could not be loaded
Execution halted
Running examples in ‘evtclass-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: gevcTest
> ### Title: GEV Classifier - testing
> ### Aliases: gevcTest
> 
> ### ** Examples
> 
> trainset <- LETTER[1:15000,]
> testset <- LETTER[-(1:15000), -1]
> knowns <- trainset[trainset$class==1, -1]
> gevClassifier <- gevcTrain(train = knowns)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RANN/libs/RANN.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RANN/libs/RANN.so: failed to map segment from shared object
Calls: gevcTrain ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Running examples in ‘ev.trawl-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: GenerateParameters
> ### Title: Computes initial guess for Univariate Latent-Trawl model. Uses
> ###   'fExtreme' package method 'gpdFit' to fit MLE.
> ### Aliases: GenerateParameters
> 
> ### ** Examples
> 
> # TODO ADD data
> data(hourlyhourly_bloomsbury_air_pollution_2000_2017)
Warning in data(hourlyhourly_bloomsbury_air_pollution_2000_2017) :
  data set ‘hourlyhourly_bloomsbury_air_pollution_2000_2017’ not found
> GenerateParameters(data = hourly_bloomsbury_air_pollution_2000_2017$O3[1:1000], cluster.size = 8)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatial/libs/spatial.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatial/libs/spatial.so: failed to map segment from shared object
Calls: GenerateParameters ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: partykit
Loading required package: grid
Loading required package: libcoin
Error: package or namespace load failed for ‘libcoin’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Error: package ‘libcoin’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘EWGoF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ewoc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
EW : PhiP : Phi: no visible global function definition for ‘pnorm’
EWplot: no visible global function definition for ‘plot’
Undefined global functions or variables:
  plot pnorm
Consider adding
  importFrom("graphics", "plot")
  importFrom("stats", "pnorm")
to your NAMESPACE file.
BinomialCIone: no visible global function definition for ‘na.omit’
PairedCIone: no visible global function definition for ‘na.omit’
Undefined global functions or variables:
  na.omit
Consider adding
  importFrom("stats", "na.omit")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘exactLoglinTest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/exactLoglinTest/libs/exactLoglinTest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/exactLoglinTest/libs/exactLoglinTest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘exactRankTests’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/exactRankTests/libs/exactRankTests.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/exactRankTests/libs/exactRankTests.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘exampletestr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Found the following assignments to the global environment:
File ‘exams/R/xexams.R’:
  assign(".xweave_svg_grdevice", .xweave_svg_grdevice, envir = .GlobalEnv)
Running examples in ‘exams-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: exams2qti12
> ### Title: Generation of Exams in IMS QTI 1.2 and 2.1 Format
> ### Aliases: exams2qti12 make_itembody_qti12 exams2qti21
> ###   make_itembody_qti21 exams2qti make_itembody_qti exams2ilias
> ### Keywords: utilities
> 
> ### ** Examples
> 
> ## load package and enforce par(ask = FALSE)
> library("exams")
> options(device.ask.default = FALSE)
> 
> ## define an exams (= list of exercises)
> myexam <- list(
+   "boxplots",
+   c("tstat", "ttest", "confint"),
+   c("regression", "anova"),
+   c("scatterplot", "boxhist"),
+   "relfreq"
+ )
> 
> ## output directory
> mydir <- tempdir()
> 
> ## generate .zip with QTI 1.2 exam in temporary directory
> ## using a few customization options
> exams2qti12(myexam, n = 3, dir = mydir,
+   maxattempts = 3,
+   num = list(digits = 1),
+   mchoice = list(shuffle = TRUE, enumerate = FALSE)
+ )
Loading required namespace: base64enc
Failed with error:  ‘unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object’
Error in make_exercise_transform_html(converter = converter, ...) : 
  requireNamespace("base64enc") is not TRUE
Calls: exams2qti12 -> make_exercise_transform_html -> stopifnot
Execution halted
Error in re-building vignettes:
  ...

Error: processing vignette ‘exams2.Rnw’ failed with diagnostics:
 chunk 1 (label = preliminaries) 
Error : package or namespace load failed for ‘base64enc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ExceedanceTools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘excerptr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: excerptr
> ### Title: Excerpt Structuring Comments and Set a Table of Contents.
> ### Aliases: excerptr
> 
> ### ** Examples
> 
> root <- system.file(package = "excerptr")
> test_files <- file.path(root, "excerpts", "tests", "files")
> excerptr(file_name = file.path(test_files, "some_file.txt"),
+          output_path = tempdir(), run_pandoc = FALSE,
+          compile_latex = FALSE,
+          pandoc_formats = c("tex", "html"))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RJSONIO/libs/RJSONIO.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RJSONIO/libs/RJSONIO.so: failed to map segment from shared object
Calls: excerptr ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘excerptr_Introduction.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘ExcessMass-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ExcessMass
> ### Title: Excess Mass Calculation and Plots
> ### Aliases: ExcessMass-package ExcessMass
> ### Keywords: package
> 
> ### ** Examples
> 
> library(MASS)
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘exCon’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘exif’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘exifr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: read_exif
> ### Title: Read EXIF data from files
> ### Aliases: read_exif
> 
> ### ** Examples
> 
> files <- list.files(path.package("exifr"), recursive=TRUE, pattern="*.jpg", full.names=TRUE)
> exifinfo <- read_exif(files)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: read_exif ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘exiftoolr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ExomeDepth’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘exp2flux’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ExPanDaR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘expandFunctions’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘expands’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: boot
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
print.cdf : numform: warning in formatC(x, dig = digits): partial
  argument match of ‘dig’ to ‘digits’
print.cdf: warning in get("x", env = environment(x)): partial argument
  match of ‘env’ to ‘envir’
print.cdf: warning in get("y", env = environment(x)): partial argument
  match of ‘env’ to ‘envir’
print.ogive : numform: warning in formatC(x, dig = digits): partial
  argument match of ‘dig’ to ‘digits’
print.ogive: warning in get("x", env = environment(x)): partial
  argument match of ‘env’ to ‘envir’
print.ogive: warning in get("y", env = environment(x)): partial
  argument match of ‘env’ to ‘envir’
quantile.expert: warning in formatC(paste(100 * probs, "%", sep = ""),
  format = "fg", wid = 1, digits = dig): partial argument match of
  ‘wid’ to ‘width’
MS: no visible global function definition for ‘tail’
Undefined global functions or variables:
  tail
Consider adding
  importFrom("utils", "tail")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘expint’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/expint/libs/expint.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/expint/libs/expint.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ExplainPrediction’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘exploreR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: massregplot
> ### Title: Mass Regression Plot
> ### Aliases: massregplot
> 
> ### ** Examples
> 
> exam.df <- iris
> massregplot(exam.df, "Sepal.Length", ignore = "Species")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: massregplot ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘exploreR.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘explor’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘expoRkit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘export’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Package in Depends field not imported from: ‘prettyGraphs’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Found the following apparent S3 methods exported but not registered:
  print.epCA print.epGPCA print.epGraphs print.epMCA print.epMDS
  print.epPCA print.epSVD print.expoOutput
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
computeConstraints: no visible global function definition for
  ‘minmaxHelper’
coreCA: no visible global function definition for ‘repmat’
coreMDS: no visible global function definition for ‘repmat’
corePCA: no visible global function definition for ‘repmat’
epGraphs: no visible global function definition for
  ‘createColorVectorsByDesign’
epGraphs: no visible global function definition for ‘prettyPlot’
epGraphs: no visible global function definition for ‘contributionBars’
expo.scale: no visible binding for global variable ‘sd’
makeDistancesAndWeights: no visible global function definition for
  ‘cor’
makeDistancesAndWeights: no visible global function definition for
  ‘dist’
makeNominalData: no visible global function definition for ‘repmat’
mca.eigen.fix: no visible global function definition for ‘repmat’
pcaSupplementaryColsPreProcessing: no visible global function
  definition for ‘repmat’
pcaSupplementaryRowsPreProcessing: no visible global function
  definition for ‘repmat’
rowNorms: no visible global function definition for ‘repmat’
supplementalProjection: no visible global function definition for
  ‘repmat’
Undefined global functions or variables:
  contributionBars cor createColorVectorsByDesign dist minmaxHelper
  prettyPlot repmat sd
Consider adding
  importFrom("stats", "cor", "dist", "sd")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘expp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘expss’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘exreport’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘extdplyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lazyeval/libs/lazyeval.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lazyeval/libs/lazyeval.so: failed to map segment from shared object
Execution halted
Package in Depends field not imported from: ‘rmeta’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
extfunnel: no visible global function definition for ‘qnorm’
extfunnel: no visible global function definition for ‘meta.summaries’
extfunnel: no visible global function definition for ‘flush.console’
extfunnel: no visible global function definition for ‘qt’
extfunnel: no visible global function definition for ‘dev.new’
extfunnel: no visible global function definition for ‘par’
extfunnel: no visible global function definition for ‘plot’
extfunnel: no visible global function definition for ‘polygon’
extfunnel: no visible global function definition for ‘segments’
extfunnel: no visible global function definition for ‘abline’
extfunnel: no visible global function definition for ‘axis’
extfunnel: no visible global function definition for ‘box’
Undefined global functions or variables:
  abline axis box dev.new flush.console meta.summaries par plot polygon
  qnorm qt segments
Consider adding
  importFrom("grDevices", "dev.new")
  importFrom("graphics", "abline", "axis", "box", "par", "plot",
             "polygon", "segments")
  importFrom("stats", "qnorm", "qt")
  importFrom("utils", "flush.console")
to your NAMESPACE file.
bars: no visible global function definition for ‘segments’
cv.binomial: no visible binding for global variable ‘var’
cv.binomial: no visible global function definition for ‘abline’
cv.normal: no visible binding for global variable ‘var’
cv.normal: no visible global function definition for ‘abline’
cv.poisson: no visible binding for global variable ‘var’
cv.poisson: no visible global function definition for ‘abline’
plot.extlasso: no visible global function definition for ‘matplot’
plot.extlasso: no visible global function definition for ‘axis’
Undefined global functions or variables:
  abline axis matplot segments var
Consider adding
  importFrom("graphics", "abline", "axis", "matplot", "segments")
  importFrom("stats", "var")
to your NAMESPACE file.
exbio: no visible global function definition for ‘as.formula’
exbio: no visible global function definition for ‘glm’
exbio: no visible binding for global variable ‘gaussian’
exbio: no visible global function definition for ‘Gamma’
exbio: no visible global function definition for ‘pchisq’
Undefined global functions or variables:
  Gamma as.formula gaussian glm pchisq
Consider adding
  importFrom("stats", "Gamma", "as.formula", "gaussian", "glm", "pchisq")
to your NAMESPACE file.
Rd file 'exbio.Rd':
  \usage lines wider than 90 characters:
     exbio(R, R.alt, cc, n, tol = 0.001, a.start = 1, b.start = 1, max.it = 1000, digits = NULL, model.maf = TRUE)

These lines will be truncated in the PDF manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘extracat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘extraDistr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
font_install: no visible global function definition for
  ‘installed.packages’
font_install: no visible global function definition for
  ‘install.packages’
fonttable_add: no visible global function definition for ‘write.csv’
Undefined global functions or variables:
  install.packages installed.packages write.csv
Consider adding
  importFrom("utils", "install.packages", "installed.packages",
             "write.csv")
to your NAMESPACE file.
Running examples in ‘extremefit-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: cox.adapt
> ### Title: Compute the extreme quantile procedure for Cox model
> ### Aliases: cox.adapt
> 
> ### ** Examples
> 
> 
> library(survival)
Error: package or namespace load failed for ‘survival’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: Lmoments
Loading required package: distillery
Loading required package: car
Loading required package: carData
Error: package or namespace load failed for ‘car’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Error: package ‘car’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘extremeStat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/evd/libs/evd.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/evd/libs/evd.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘extremevalues’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘extremis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘extremogram-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: bootconfr
> ### Title: Confidence bands for the sample return time extremogram
> ### Aliases: bootconfr
> 
> ### ** Examples
> 
> # generate a GARCH(1,1) process
> omega    = 1
> alpha    = 0.1
> beta     = 0.6
> n        = 1000
> uplevel  = 0.95
> lowlevel = 0.05
> type     = 3
> maxlag   = 70
> df       = 3
> R        = 10
> l        = 30
> par      = 0
> G = extremogram:::garchsim(omega,alpha,beta,n,df)
> 
> extremogramr(G, type, maxlag, uplevel, lowlevel, 1, 1)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: extremogramr ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘extWeibQuant’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/extWeibQuant/libs/extWeibQuant.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/extWeibQuant/libs/extWeibQuant.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘exuber’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘eyelinker’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/intervals/libs/intervals.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/intervals/libs/intervals.so: failed to map segment from shared object
Execution halted
Rd file 'distance2point.Rd':
  \usage lines wider than 90 characters:
     distance2point(x, y, viewerDistance, viewerHeight, resolutionX, resolutionY, screenWidth, screenHeight)
  \examples lines wider than 100 characters:
     function( x, y, viewerDistance, viewerHeight, resolutionX, resolutionY, screenWidth, screenHeight ) {

Rd file 'subtendedAngle.Rd':
  \usage lines wider than 90 characters:
     subtendedAngle(x1, y1, x2, y2, viewerDistance = 58.74, viewerHeight = 4.55, resolutionX = 1280, resolutionY = 1024, screenWidth = 33.97 ... [TRUNCATED]
  \examples lines wider than 100 characters:
     function( x1, y1, x2, y2, viewerDistance=58.74, viewerHeight=4.55, resolutionX=1280, resolutionY=1024, screenWidth=33.97, screenHeight= ... [TRUNCATED]
         d1 <- distance2point(x1, y1, viewerDistance, viewerHeight, resolutionX, resolutionY, screenWidth, screenHeight)
         d2 <- distance2point(x2, y2, viewerDistance, viewerHeight, resolutionX, resolutionY, screenWidth, screenHeight)

These lines will be truncated in the PDF manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ezec’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ezglm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ezglm/libs/ezglm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ezglm/libs/ezglm.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘ezknitr.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘ezpickr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: pick
> ### Title: Choosing any rectangular data file using interactive GUI dialog
> ###   box.
> ### Aliases: pick
> ### Keywords: pick
> 
> ### ** Examples
> 
> # Choosing file and saving it into a variable
> ## Scenario 1: Picking up a file using interactive GUI dialog box:
> if(interactive()) {
+   library(ezpickr)
+   data <- pick()
+ }
> 
> ## Scenario 2: Picking up a file using an explicit file name ("test.sav" in the example below;
> ## however, you can feed other files through this function
> ## such as *.SAS, *.DTA, *.csv, *.csv2, *.tsv, *.xlsx, *.txt,
> ## *.html, webpage URL, *doc, *.docx, *.pdf, *.rtf, *.json, *.Rda, *.Rdata, and more):
> library(ezpickr)
> test <- system.file("extdata", "airquality.sav", package = "ezpickr")
> data <- pick(test)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: pick ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘ezpickr_vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ez’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Malformed Description field: should contain one or more complete sentences.
BugReports field is not a suitable URL but contains an email address
  which will be used as from R 3.4.0
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ezsim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ezsummary’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Running examples in ‘EZtune-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: eztune
> ### Title: Supervised Learning Function
> ### Aliases: eztune
> ### Keywords: adaboost, gbm, svm, tuning
> 
> ### ** Examples
> 
> library(mlbench)
Error: package or namespace load failed for ‘mlbench’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mlbench/libs/mlbench.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mlbench/libs/mlbench.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fabMix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fabricatr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘facebook.S4’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘face’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘facerec’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘facilitation’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: Rlab
Rlab 2.15.1 attached.


Attaching package: ‘Rlab’

The following objects are masked from ‘package:stats’:

    dexp, dgamma, dweibull, pexp, pgamma, pweibull, qexp, qgamma,
    qweibull, rexp, rgamma, rweibull

The following object is masked from ‘package:datasets’:

    precip

Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FACTMLE’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FactoInvestigate’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/leaps/libs/leaps.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/leaps/libs/leaps.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FactoMineR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/leaps/libs/leaps.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/leaps/libs/leaps.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘factorcpt’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘factorMerger’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘factorplot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘factorstochvol’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/GIGrvg/libs/GIGrvg.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/GIGrvg/libs/GIGrvg.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: FactoMineR
Error: package or namespace load failed for ‘FactoMineR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/leaps/libs/leaps.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/leaps/libs/leaps.so: failed to map segment from shared object
Error: package ‘FactoMineR’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: RJSONIO
Error: package or namespace load failed for ‘RJSONIO’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RJSONIO/libs/RJSONIO.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RJSONIO/libs/RJSONIO.so: failed to map segment from shared object
Error: package ‘RJSONIO’ could not be loaded
Execution halted
Running examples in ‘Fahrmeir-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: Regensburg
> ### Title: Job Expectation
> ### Aliases: Regensburg
> ### Keywords: datasets
> 
> ### ** Examples
> 
> str(Regensburg)
'data.frame':	30 obs. of  4 variables:
 $ y   : int  1 2 3 1 2 3 1 2 3 1 ...
 $ n   : int  1 2 0 5 18 2 6 19 2 1 ...
 $ age : int  19 19 19 20 20 20 21 21 21 22 ...
 $ lage: num  2.94 2.94 2.94 3 3 ...
> summary(Regensburg)
       y               n             age             lage      
 Min.   :1.000   Min.   : 0.0   Min.   :19.00   Min.   :2.944  
 1st Qu.:1.000   1st Qu.: 1.0   1st Qu.:21.00   1st Qu.:3.045  
 Median :2.000   Median : 2.0   Median :23.50   Median :3.156  
 Mean   :1.967   Mean   : 3.4   Mean   :24.40   Mean   :3.180  
 3rd Qu.:3.000   3rd Qu.: 4.5   3rd Qu.:26.75   3rd Qu.:3.287  
 Max.   :3.000   Max.   :19.0   Max.   :34.00   Max.   :3.526  
> # Example 3.5 page 83 in book:
> library(MASS)
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fail’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so: failed to map segment from shared object
Execution halted
faisalconjoint: no visible global function definition for ‘barplot’
faisalconjoint: no visible global function definition for ‘text’
faisalconjoint: no visible global function definition for ‘jpeg’
faisalconjoint: no visible global function definition for ‘dev.off’
Undefined global functions or variables:
  barplot dev.off jpeg text
Consider adding
  importFrom("grDevices", "dev.off", "jpeg")
  importFrom("graphics", "barplot", "text")
to your NAMESPACE file.
Running examples in ‘fakemake-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: get_pkg_archive_path
> ### Title: Get a Package's Archive Path From the Package's DESCRIPTION
> ### Aliases: get_pkg_archive_path
> 
> ### ** Examples
> 
> package_path <- file.path(tempdir(), "anRpackage")
> usethis::create_package(path = package_path)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: :: ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘An_Introduction_to_fakemake.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fakeR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘falcon’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/falcon/libs/falcon.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/falcon/libs/falcon.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘falconx’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/falconx/libs/falconx.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/falconx/libs/falconx.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: Familias
Loading required package: kinship2
Loading required package: Matrix
Error: package or namespace load failed for ‘Matrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘Matrix’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fame’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/tis/libs/tis.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/tis/libs/tis.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FAMILY’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘FAMoS-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: base.optim
> ### Title: Fit Parameters of a Model
> ### Aliases: base.optim
> 
> ### ** Examples
> 
> future::plan(future::sequential)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Calls: :: ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘FAMoS-EvaluationFunctions.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘famSKATRC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/CompQuadForm/libs/CompQuadForm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/CompQuadForm/libs/CompQuadForm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: mnormt
Error: package or namespace load failed for ‘mnormt’:
 .onLoad failed in loadNamespace() for ‘mnormt’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so: failed to map segment from shared object
Error: package ‘mnormt’ could not be loaded
Execution halted
S3 methods shown with full name in documentation object 'plot.fANCOVA':
  ‘plot.fANCOVA’

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: sensitivity
Error: package or namespace load failed for ‘sensitivity’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sensitivity/libs/sensitivity.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sensitivity/libs/sensitivity.so: failed to map segment from shared object
Error: package ‘sensitivity’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fansi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fansi/libs/fansi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fansi/libs/fansi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FAOSTAT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: sem
Error: package or namespace load failed for ‘sem’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘sem’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘faraway’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘farff’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FarmSelect’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ncvreg/libs/ncvreg.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ncvreg/libs/ncvreg.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FarmTest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘farver’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: timeDate
Loading required package: timeSeries
Loading required package: fBasics
Error: package or namespace load failed for ‘fBasics’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatial/libs/spatial.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatial/libs/spatial.so: failed to map segment from shared object
Error: package ‘fBasics’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fastAdaboost’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rpart/libs/rpart.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rpart/libs/rpart.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FastBandChol’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fastcluster’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fastcluster/libs/fastcluster.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fastcluster/libs/fastcluster.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: bindata
Error: package or namespace load failed for ‘bindata’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so: failed to map segment from shared object
Error: package ‘bindata’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fastcox’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fastdigest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fastdigest/libs/fastdigest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fastdigest/libs/fastdigest.so: failed to map segment from shared object
Execution halted
Running examples in ‘fastDummies-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: dummy_cols
> ### Title: Fast creation of dummy variables
> ### Aliases: dummy_cols
> 
> ### ** Examples
> 
> crime <- data.frame(city = c("SF", "SF", "NYC"),
+     year = c(1990, 2000, 1990),
+     crime = 1:3)
> dummy_cols(crime)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Calls: dummy_cols ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘making-dummy-rows.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fasteraster’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fasterElasticNet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fasterize’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FastGP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: matrixStats
Error: package or namespace load failed for ‘matrixStats’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/matrixStats/libs/matrixStats.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/matrixStats/libs/matrixStats.so: failed to map segment from shared object
Error: package ‘matrixStats’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: fastICA
Error: package or namespace load failed for ‘fastICA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fastICA/libs/fastICA.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fastICA/libs/fastICA.so: failed to map segment from shared object
Error: package ‘fastICA’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fastICA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fastICA/libs/fastICA.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fastICA/libs/fastICA.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fastJT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Package suggested but not available for checking: ‘coxKM’
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rARPACK
Error: package or namespace load failed for ‘rARPACK’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘rARPACK’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FastKNN’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/pdist/libs/pdist.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/pdist/libs/pdist.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fastLink’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘fastmaRching-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: spFastMarch
> ### Title: Runs the spatial version of the Modified Fast Marching Method
> ### Aliases: spFastMarch
> 
> ### ** Examples
> 
> library(raster); library(sp); library(rgdal)
Loading required package: sp
Error: package or namespace load failed for ‘sp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘sp’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fastmatch’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fastmatch/libs/fastmatch.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fastmatch/libs/fastmatch.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fastM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fastnet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Running examples in ‘fastpseudo-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: fast_pseudo_mean
> ### Title: Calculate pseudo-observations.
> ### Aliases: fast_pseudo_mean
> 
> ### ** Examples
> 
> # Dummy data
> 
> id <- c(1, 2, 3, 4)
> female <- c(0, 1, 1, 0)
> time <- c(23, 45, 38, 66)
> event <- c(1, 0, 0, 0)
> 
> # Compute pseudo-observations
> 
> pseudo = fast_pseudo_mean(time, event, 50)
> 
> # Create a data frame
> 
> test <- data.frame(id, female, pseudo)
> 
> # Fit a regression model
> 
> library(geepack)
Error: package or namespace load failed for ‘geepack’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geepack/libs/geepack.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geepack/libs/geepack.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fastqcr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: mosaic
Loading required package: dplyr
Error: package or namespace load failed for ‘dplyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Error: package ‘dplyr’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fastrtext’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  Rconnection.h:202:12: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
  Rconnection.h:205:12: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
  Rconnection.cc:53:20: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/FastRWeb.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FastRWeb’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FastSF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fastSOM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fastSOM/libs/fastSOM.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fastSOM/libs/fastSOM.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fastTextR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fasttime’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fasttime/libs/fasttime.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fasttime/libs/fasttime.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fat2Lpoly’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nnet/libs/nnet.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nnet/libs/nnet.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FateID’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FatTailsR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/minpack.lm/libs/minpack.lm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/minpack.lm/libs/minpack.lm.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘fauxpas-vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fbar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: timeDate
Loading required package: timeSeries
Error: package or namespace load failed for ‘fBasics’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatial/libs/spatial.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatial/libs/spatial.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: pbatR
Error: package or namespace load failed for ‘pbatR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘pbatR’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FBFsearch’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
FBN.histogramMaxima: no visible global function definition for ‘hist’
FBN.kmeans: no visible global function definition for ‘median’
FBN.kmeans: no visible global function definition for ‘kmeans’
FBNormalization: no visible global function definition for ‘read.table’
FBNormalization: no visible global function definition for ‘median’
FBNormalization: no visible global function definition for ‘hist’
FBNormalization: no visible global function definition for ‘par’
FBNormalization: no visible global function definition for ‘dev.print’
FBNormalization: no visible binding for global variable ‘bmp’
FBNormalization: no visible global function definition for ‘sd’
FBNormalization: no visible global function definition for
  ‘write.table’
medianFilter: no visible global function definition for ‘median’
Undefined global functions or variables:
  bmp dev.print hist kmeans median par read.table sd write.table
Consider adding
  importFrom("grDevices", "bmp", "dev.print")
  importFrom("graphics", "hist", "par")
  importFrom("stats", "kmeans", "median", "sd")
  importFrom("utils", "read.table", "write.table")
to your NAMESPACE file.
Rd file 'FBNormalization.Rd':
  \usage lines wider than 90 characters:
             normDataFileName = NULL, debugFlag = FALSE, plotFlag = FALSE, plotAndSaveFlag = FALSE)

These lines will be truncated in the PDF manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fbRads’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fbRanks’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: fBasics
Loading required package: timeDate
Loading required package: timeSeries
Error: package or namespace load failed for ‘fBasics’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatial/libs/spatial.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatial/libs/spatial.so: failed to map segment from shared object
Error: package ‘fBasics’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: KernSmooth
Error: package or namespace load failed for ‘KernSmooth’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KernSmooth/libs/KernSmooth.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KernSmooth/libs/KernSmooth.so: failed to map segment from shared object
Error: package ‘KernSmooth’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fChange’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fclust’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘FCMapper-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: graph.fcm
> ### Title: Fuzzy cognitive map graph
> ### Aliases: graph.fcm
> 
> ### ** Examples
> 
> 
> matrix = matrix(nrow=7,ncol=7)
> matrix[1,] = c(0,-0.5,0,0,1,0,1)
> matrix[2,] = c(1,0,1,0.2,0,0,0.6)
> matrix[3,] = c(0,1,0,0,0,0,0)
> matrix[4,] = c(0.6,0,0,1,0,0,0.1)
> matrix[5,] = c(0,0.5,0,0,1,0,-0.6) 
> matrix[6,] = c(0,0,-1,0,0,0,0)
> matrix[7,] = c(0,0,0,-0.5,0,0,1)
> concept.names = c("A","B","C","D","E","F","G")
> 
> results = nochanges.scenario(matrix,iter=25,concept.names)
> 
> graph.fcm(matrix,concept.sizes=results$Equilibrium_value,concept.names)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Calls: graph.fcm ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fcm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fcros’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fcros/libs/fcros.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fcros/libs/fcros.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: face
Error: package or namespace load failed for ‘face’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘face’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fcuk’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringdist/libs/stringdist.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringdist/libs/stringdist.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fdadensity’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fdaMixed’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fdANOVA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fdapace’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: splines
Loading required package: Matrix
Error: package or namespace load failed for ‘Matrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘Matrix’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fdasrvf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘fdcov-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: classifier-com
> ### Title: Functional data classifier via concentration inequalities
> ### Aliases: classifier-com classif.com predict.classif.com
> 
> ### ** Examples
> 
> ## Not run: 
> ##D  library(fds);
> ##D  # Setup training data
> ##D  dat1 = rbind( 
> ##D    t(aa$y[,1:100]), t(ao$y[,1:100]), t(dcl$y[,1:100]), 
> ##D    t(iy$y[,1:100]), t(sh$y[,1:100]) 
> ##D  );
> ##D  # Setup testing data
> ##D  dat2 = rbind( 
> ##D    t(aa$y[,101:400]), t(ao$y[,101:400]), t(dcl$y[,101:400]), 
> ##D    t(iy$y[,101:400]), t(sh$y[,101:400]) 
> ##D  );
> ##D  
> ##D  datgrp = gl(5,100);
> ##D  clCom = classif.com( datgrp, dat1 );
> ##D  grp = predict( clCom, dat2, LOADING=TRUE );
> ##D  acc = c(
> ##D    sum( grp[1:300]==1 ), sum( grp[301:600]==2 ), sum( grp[601:900]==3 ), 
> ##D    sum( grp[901:1200]==4 ), sum( grp[1201:1500]==5 )
> ##D  )/300;
> ##D  print(rbind(gl(5,1),signif(acc,3)));
> ## End(Not run)
> ## Don't show: 
>  library(fds);
Loading required package: rainbow
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fDMA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/png/libs/png.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/png/libs/png.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: Fgmutils
Loading required package: sqldf
Loading required package: gsubfn
Loading required package: proto
Loading required package: RSQLite
Error: package or namespace load failed for ‘RSQLite’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘RSQLite’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fdrDiscreteNull’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FDRSeg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fdrtool’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fdrtool/libs/fdrtool.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fdrtool/libs/fdrtool.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rainbow
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘feather’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Warning: namespace ‘rpart’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rpart’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rpart’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rpart’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rpart’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
See section ‘Generic functions and methods’ in the ‘Writing R
Extensions’ manual.
Warning: namespace ‘rpart’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rpart’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rpart’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rpart’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rpart’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rpart’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rpart’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rpart’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rpart’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rpart’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
Running examples in ‘featurefinder-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: parseSplits
> ### Title: parseSplits
> ### Aliases: parseSplits
> ### Keywords: saveTree
> 
> ### ** Examples
> 
> 
> require(featurefinder)
> data(examples)
> parseSplits(treesAll[[1]][[2]])
Warning: namespace ‘rpart’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rpart’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rpart/libs/rpart.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rpart/libs/rpart.so: failed to map segment from shared object
Calls: parseSplits ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘featurefinder.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FeatureHashing’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘feature’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KernSmooth/libs/KernSmooth.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KernSmooth/libs/KernSmooth.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: lokern
Error: package or namespace load failed for ‘lokern’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lokern/libs/lokern.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lokern/libs/lokern.so: failed to map segment from shared object
Error: package ‘lokern’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
---------------------------------------------------------------------
Free Brazilian Repository for Open Soil Data 
febr version 1.0.1 
(built on 2018-11-11) is now loaded                      
                                                                     
Making the access to the Free Brazilian Repository for Open Soil Data
as easy as possible. Access http://www.ufsm.br/febr/.                
Contact febr-forum@googlegroups.com for more information             
and to learn how you can help!                                       
---------------------------------------------------------------------

Error: package or namespace load failed for ‘febr’:
 .onAttach failed in attachNamespace() for ‘febr’, details:
  call: NULL
  error: package(s) needed for febr to work but not installed: dplyr glue googlesheets pedometrics readr sp stringr
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fechner’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fechner/libs/fechner.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fechner/libs/fechner.so: failed to map segment from shared object
Execution halted
Running examples in ‘fecR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: calc_days_at_sea_trip
> ### Title: Calculate days at sea for a fishing trip.
> ### Aliases: calc_days_at_sea_trip
> 
> ### ** Examples
> 
> trip1 <- data.frame(
+    eunr_id = "my_boat", loa = 2000, gt = 70, kw = 400,
+    trip_id = "trip1",
+    # 4 day trip
+    depdate = "20140718", deptime = "0615", retdate = "20140721", rettime = "1615",
+    # Only fish on 2 of those
+    fishdate = c("20140719", "20140719", "20140719", "20140719", "20140720",
+        "20140720", "20140720"), 
+    gear = c("OTB","OTB","OTB","GN","OTB","GN","FPO"), gear_mesh_size = c(80,80,80,50,80,50,0),
+    fishing_area = "27.4.B",
+    economic_zone = "EU",
+    rectangle = c("39F0","40F0","41F0","41F0","41F0","41F0","41F0"),
+    stringsAsFactors = FALSE
+ )
> das <- calc_days_at_sea_trip(trip1)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: calc_days_at_sea_trip ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘calculating_fishing_effort.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘federalregister’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fedreporter’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘feedeR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fence’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FENmlm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fetchR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tcltk
Loading required package: tkrplot
Loading required package: R2HTML
Error: package or namespace load failed for ‘FFD’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FFD/libs/FFD.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FFD/libs/FFD.so: failed to map segment from shared object
In addition: Warning message:
loading Rplot failed 
Execution halted
'library' or 'require' calls in package code:
  ‘ggplot2’ ‘gridExtra’
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
FFieldPtRepDemo: no visible global function definition for ‘ggplot’
FFieldPtRepDemo: no visible binding for global variable ‘mtcars’
FFieldPtRepDemo: no visible global function definition for ‘aes’
FFieldPtRepDemo: no visible binding for global variable ‘mpg’
FFieldPtRepDemo: no visible global function definition for ‘geom_point’
FFieldPtRepDemo: no visible global function definition for ‘geom_text’
FFieldPtRepDemo: no visible global function definition for ‘ggtitle’
FFieldPtRepDemo: no visible global function definition for
  ‘geom_segment’
FFieldPtRepDemo: no visible global function definition for
  ‘grid.arrange’
Undefined global functions or variables:
  aes geom_point geom_segment geom_text ggplot ggtitle grid.arrange mpg
  mtcars
Consider adding
  importFrom("datasets", "mtcars")
to your NAMESPACE file.
Running examples in ‘FField-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: FField-package
> ### Title: Force field simulation for a set of points
> ### Aliases: FField FField-package
> ### Keywords: package
> 
> ### ** Examples
> 
> # Repel points
> coords <-
+   FFieldPtRep(coords = cbind(mtcars$wt * 100 / max(mtcars$wt), 
+                              mtcars$mpg * 100 / max(mtcars$mpg)),
+               rep.fact = 40)
> head(mtcars)
                   mpg cyl disp  hp drat    wt  qsec vs am gear carb
Mazda RX4         21.0   6  160 110 3.90 2.620 16.46  0  1    4    4
Mazda RX4 Wag     21.0   6  160 110 3.90 2.875 17.02  0  1    4    4
Datsun 710        22.8   4  108  93 3.85 2.320 18.61  1  1    4    1
Hornet 4 Drive    21.4   6  258 110 3.08 3.215 19.44  1  0    3    1
Hornet Sportabout 18.7   8  360 175 3.15 3.440 17.02  0  0    3    2
Valiant           18.1   6  225 105 2.76 3.460 20.22  1  0    3    1
> head(coords)
         x        y
1 45.11259 58.47014
2 54.19136 61.20140
3 40.34714 69.42976
4 62.48920 65.94822
5 59.81417 56.33633
6 66.54832 53.33343
>   
> # Demo
> FFieldPtRepDemo()
Error: package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘ffmetadata-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: search_metadata
> ### Title: Search Metadata
> ### Aliases: search_metadata
> 
> ### ** Examples
> 
> search_test1 <- search_metadata(wave = "Year 1")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Calls: search_metadata ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘APIUsage.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FFTrees’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fftw’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fftw/libs/fftw.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fftw/libs/fftw.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fftwtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fftwtools/libs/fftwtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fftwtools/libs/fftwtools.so: failed to map segment from shared object
Execution halted
ftest: no visible global function definition for ‘wilcox.test’
ftest: no visible global function definition for ‘t.test’
Undefined global functions or variables:
  t.test wilcox.test
Consider adding
  importFrom("stats", "t.test", "wilcox.test")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: sqldf
Loading required package: gsubfn
Loading required package: proto
Loading required package: RSQLite
Error: package or namespace load failed for ‘RSQLite’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘RSQLite’ could not be loaded
Execution halted
fgeasy: no visible global function definition for ‘dist’
fgeasy : cor.est: no visible global function definition for ‘cor.test’
fgeasy: no visible binding for global variable ‘var’
fgperm : runrand: no visible global function definition for ‘runif’
fgperm : runrand: no visible global function definition for ‘ave’
fgploc : runrand: no visible global function definition for ‘runif’
fgploc : runrand: no visible global function definition for ‘ave’
fyshuffle: no visible global function definition for ‘runif’
plot.fg: no visible global function definition for ‘par’
plot.fg: no visible global function definition for ‘plot’
plot.fg: no visible global function definition for ‘segments’
plot.fg: no visible binding for global variable ‘quantile’
plot.fg: no visible global function definition for ‘abline’
plot.fg: no visible global function definition for ‘axis’
summary.fg: no visible binding for global variable ‘quantile’
Undefined global functions or variables:
  abline ave axis cor.test dist par plot quantile runif segments var
Consider adding
  importFrom("graphics", "abline", "axis", "par", "plot", "segments")
  importFrom("stats", "ave", "cor.test", "dist", "quantile", "runif",
             "var")
to your NAMESPACE file.
Error in re-building vignettes:
  ...
Error: processing vignette ‘intro-fgpt.Rnw’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FGSG’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FGSG/libs/FGSG.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FGSG/libs/FGSG.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FHDI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FHDI/libs/FHDI.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FHDI/libs/FHDI.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: interval
Loading required package: survival
Error: package or namespace load failed for ‘survival’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘survival’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FIACH’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fICA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fieldRS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fiery’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘filehash’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/filehash/libs/filehash.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/filehash/libs/filehash.so: failed to map segment from shared object
Execution halted
Malformed Description field: should contain one or more complete sentences.
Packages listed in more than one of Depends, Imports, Suggests, Enhances:
  ‘filehash’ ‘DBI’
A package should be listed in only one of these fields.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: filehash
Error: package or namespace load failed for ‘filehash’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/filehash/libs/filehash.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/filehash/libs/filehash.so: failed to map segment from shared object
Error: package ‘filehash’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘filelock’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/filelock/libs/filelock.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/filelock/libs/filelock.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘FM1_UsingFilematrices.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tibble
Error: package or namespace load failed for ‘tibble’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Error: package ‘tibble’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FILEST’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘filling’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘finalfit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: quantmod
Loading required package: xts
Loading required package: zoo
Error: package or namespace load failed for ‘zoo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘zoo’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FinCal’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘finch’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘FinCovRegularization-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: GMVP
> ### Title: Global Minimum Variance Portfolio
> ### Aliases: GMVP
> 
> ### ** Examples
> 
> data(m.excess.c10sp9003)
> assets <- m.excess.c10sp9003[,1:10]
> GMVP(cov(assets), short=TRUE)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Calls: GMVP ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: arm
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Running ‘run-all.R’ [0s/0s]
Running the tests in ‘tests/run-all.R’ failed.
Complete output:
  > library("testthat")
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Running examples in ‘findR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: reminder
> ### Title: Find reminders on how to use a specific R function
> ### Aliases: reminder
> 
> ### ** Examples
> 
> # Find reminder on how to use the function chordDiagram
> reminder(func = "chordDiagram", path = system.file(package = "findR"), stepwise = FALSE)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: reminder ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘findviews’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fingerprint’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fingerprint/libs/fingerprint.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fingerprint/libs/fingerprint.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fingerPro’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fingertipscharts’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fingertipsR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘finiteruinprob’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/PolynomF/libs/PolynomF.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/PolynomF/libs/PolynomF.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘finreportr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘firebehavioR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Using_fishdata.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
'library' or 'require' call to ‘tkrplot’ which was already attached by Depends.
  Please remove these calls from your code.
Packages in Depends field not imported from:
  ‘methods’ ‘tkrplot’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Rd file 'POICalc.Rd':
  \examples lines wider than 100 characters:
        irisPOI@wordsInQuery <- c('high.Sepal.Length', 'high.Sepal.Width', 'high.Petal.Length', 'high.Petal.Width',
                                  'low.Sepal.Length', 'low.Sepal.Width', 'low.Petal.Length', 'low.Petal.Width')

Rd file 'POIcoords_-.Rd':
  \examples lines wider than 100 characters:
        irisPOI@wordsInQuery <- c('high.Sepal.Length', 'high.Sepal.Width', 'high.Petal.Length', 'high.Petal.Width',
                                  'low.Sepal.Length', 'low.Sepal.Width', 'low.Petal.Length', 'low.Petal.Width')

Rd file 'plotPOI.Rd':
  \examples lines wider than 100 characters:
          graphPOI@docs <- matrix(c(seq(1:nrow(graphPOI@objeto)), seq(1:nrow(graphPOI@objeto))), ncol = 2)
        graphPOI@objeto <- graphPOI@objeto <- rbind(c(0,.05), c(.05,0), c(0,-.05), c(-.05,0) ,round(circulo(0,0,.3,PLOT = FALSE),2))
         1 - (max(USArrests[,4]) - USArrests[,4]) / (max(max(USArrests[,4]) - USArrests[,4])),                                               ... [TRUNCATED]
        usaPOI@wordsInQuery <- c(paste('High', names(USArrests[,c(1,2,4)])), paste('Low', names(USArrests[,c(1,2,4)])))

These lines will be truncated in the PDF manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fishMod’:
 .onLoad failed in loadNamespace() for ‘fishMod’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fishMod/libs/fishMod.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fishMod/libs/fishMod.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FishResp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/chron/libs/chron.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/chron/libs/chron.so: failed to map segment from shared object
Execution halted
Running examples in ‘fishtree-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: fishtree_alignment
> ### Title: Get aligned sequences from the Fish Tree of Life
> ### Aliases: fishtree_alignment
> 
> ### ** Examples
> 
> surgeon_dna <- fishtree_alignment(rank = "Acanthuridae", split = TRUE)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: fishtree_alignment ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘comparative-analysis.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Depends: includes the non-default packages:
  'gWidgets', 'tcltk', 'tkrplot', 'RGtk2', 'gWidgetsRGtk2',
  'cairoDevice'
Adding so many packages to the search path is excessive and importing
selectively is preferable.
Non-standard file/directory found at top level:
  ‘NAMESPACE.txt’
Loading this package had a fatal error status code 1
Loading log:
Loading required package: gWidgets
Loading required package: tcltk
Loading required package: tkrplot
Loading required package: RGtk2
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RGtk2/libs/RGtk2.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RGtk2/libs/RGtk2.so: failed to map segment from shared object
In addition: Warning message:
loading Rplot failed 
Error: package or namespace load failed for ‘RGtk2’:
 .onLoad failed in loadNamespace() for ‘RGtk2’, details:
  call: install_all()
  error: This platform is not yet supported by the automatic installer. Please install GTK+ manually, if necessary. See: http://www.gtk.org
Error: package ‘RGtk2’ could not be loaded
In addition: Warning message:
Failed to load RGtk2 dynamic library, attempting to install it. 
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: FitAR
Loading required package: lattice
Error: package or namespace load failed for ‘lattice’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘lattice’ could not be loaded
Execution halted
Packages listed in more than one of Depends, Imports, Suggests, Enhances:
  ‘lattice’ ‘leaps’ ‘ltsa’
A package should be listed in only one of these fields.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fit.models’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘fitODBOD-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: EstMGFBetaBin
> ### Title: Estimating the shape parameters a and b for Beta-Binomial
> ###   Distribution
> ### Aliases: EstMGFBetaBin
> 
> ### ** Examples
> 
> No.D.D=0:7        #assigning the random variables
> Obs.fre.1=c(47,54,43,40,40,41,39,95)   #assigning the corresponding frequencies
> #estimating the parameters using maximum log likelihood value and assigning it
> parameters=suppressWarnings(bbmle::mle2(EstMLEBetaBin,start = list(a=0.1,b=0.1),
+ data = list(x=No.D.D,freq=Obs.fre.1)))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FIT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Package suggested but not available for checking: ‘ExtDist’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fitteR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
'library' or 'require' calls in package code:
  ‘devEMF’ ‘doMC’ ‘foreach’ ‘grDevices’
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fitur’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/expint/libs/expint.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/expint/libs/expint.so: failed to map segment from shared object
Execution halted
Running examples in ‘fivethirtyeight-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ahca_polls
> ### Title: American Health Care Act Polls
> ### Aliases: ahca_polls
> ### Keywords: datasets
> 
> ### ** Examples
> 
> # To convert data frame to tidy data (long) format, run:
> library(tidyverse)
Error: package or namespace load failed for ‘tidyverse’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘bechdel.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘fixedTimeEvents.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fixerapi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: RUnit
Error: package or namespace load failed for ‘FKF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FKF/libs/FKF.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FKF/libs/FKF.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘flacco’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘flam’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘flashClust’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/flashClust/libs/flashClust.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/flashClust/libs/flashClust.so: failed to map segment from shared object
Execution halted
Running examples in ‘flatxml-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: fxml_findPath
> ### Title: Finding XML elements
> ### Aliases: fxml_findPath
> 
> ### ** Examples
> 
> # Load example file with population data from United Nations Statistics Division
> # and create flat dataframe
> example <- system.file("worldpopulation.xml", package="flatxml")
> xml.dataframe <- fxml_importXMLFlat(example)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Calls: fxml_importXMLFlat ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘flexCWM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mclust/libs/mclust.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mclust/libs/mclust.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘flexdashboard’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘fmp.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FlexScan’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Package suggested but not available for checking: ‘ActuDistns’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘flextable’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘flifo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘FLightR_with_black-tailed_godwit_vignette_from_MEE_2017.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘flip’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FLLat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘float’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/float/libs/float.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/float/libs/float.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘flock’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FloodMapper’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘flood’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘flora’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: flowWorkspace
Loading required package: flowCore
Error: package or namespace load failed for ‘flowCore’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘flowCore’ could not be loaded
Execution halted
RIind: no visible global function definition for ‘aggregate’
RIind: no visible binding for global variable ‘sd’
RIpop: no visible global function definition for ‘aggregate’
RIpop: no visible binding for global variable ‘sd’
SI: no visible global function definition for ‘sd’
SI2: no visible global function definition for ‘sd’
SI3: no visible global function definition for ‘aggregate’
SI3: no visible global function definition for ‘pairs’
SI3: no visible global function definition for ‘cor’
SI4: no visible global function definition for ‘aggregate’
SI4: no visible global function definition for ‘sd’
fCV: no visible global function definition for ‘sd’
Undefined global functions or variables:
  aggregate cor pairs sd
Consider adding
  importFrom("graphics", "pairs")
  importFrom("stats", "aggregate", "cor", "sd")
to your NAMESPACE file.
GCV: no visible global function definition for ‘lm’
GCV: no visible global function definition for ‘resid’
ffplot: no visible global function definition for ‘par’
ffplot: no visible global function definition for ‘plot’
ffplot: no visible global function definition for ‘points’
ffplot: no visible global function definition for ‘legend’
flowfield: no visible global function definition for ‘write.table’
gpr: no visible global function definition for ‘quantile’
gpr: no visible global function definition for ‘var’
smoothp: no visible global function definition for ‘lm’
smoothp: no visible global function definition for ‘predict’
smoothp: no visible global function definition for ‘resid’
smoothp: no visible global function definition for ‘optimize’
Undefined global functions or variables:
  legend lm optimize par plot points predict quantile resid var
  write.table
Consider adding
  importFrom("graphics", "legend", "par", "plot", "points")
  importFrom("stats", "lm", "optimize", "predict", "quantile", "resid",
             "var")
  importFrom("utils", "write.table")
to your NAMESPACE file.
Running examples in ‘flowfield-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: Flow Field Forecasting
> ### Title: Forecast of a univariate time series Flow Field Forecasting
> ### Aliases: 'Flow Field Forecasting'
> ### Keywords: package
> 
> ### ** Examples
> 
> library(SemiPar)
Error: package or namespace load failed for ‘SemiPar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FlowRegEnvCost’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘flowr_install.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Running examples in ‘FlowScreen-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: MAMn
> ### Title: Calculate mean annual minimum n-day flows
> ### Aliases: MAMn
> 
> ### ** Examples
> 
> data(cania.sub.ts)
> 
> # find the annual minimum series and plot 
> res <- MAMn(cania.sub.ts, n=1)
> res2 <- screen.metric(res, "Q (m3/s)")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Kendall/libs/Kendall.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Kendall/libs/Kendall.so: failed to map segment from shared object
Calls: screen.metric ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘flows’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘flsa’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/flsa/libs/flsa.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/flsa/libs/flsa.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FLSSS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
prepare_Rd: Flury-package.Rd:37-39: Dropping empty section \examples
prepare_Rd: apples.Rd:19-21: Dropping empty section \details
prepare_Rd: basketball.Rd:28-29: Dropping empty section \references
prepare_Rd: challenger.Rd:18-20: Dropping empty section \details
prepare_Rd: computers.Rd:16-18: Dropping empty section \details
prepare_Rd: cork.Rd:19-20: Dropping empty section \details
prepare_Rd: dead.beetles.Rd:17-19: Dropping empty section \details
prepare_Rd: deer.Rd:14-16: Dropping empty section \details
prepare_Rd: dogwood.Rd:22-24: Dropping empty section \details
prepare_Rd: f.twins.Rd:23-25: Dropping empty section \details
prepare_Rd: flea.beetles.Rd:22-24: Dropping empty section \details
prepare_Rd: ghq.Rd:25-27: Dropping empty section \details
prepare_Rd: lookup.Rd:15-17: Dropping empty section \details
prepare_Rd: lookup.Rd:18-20: Dropping empty section \source
prepare_Rd: m.twins.Rd:24-26: Dropping empty section \details
prepare_Rd: mumps.Rd:14-16: Dropping empty section \details
prepare_Rd: pipits.Rd:17-19: Dropping empty section \details
prepare_Rd: pipits2.Rd:18-19: Dropping empty section \details
prepare_Rd: robustus.Rd:17-19: Dropping empty section \details
prepare_Rd: sibling.heads.Rd:18-20: Dropping empty section \details
prepare_Rd: snailsf.Rd:25-27: Dropping empty section \details
prepare_Rd: steve.Rd:19-20: Dropping empty section \details
prepare_Rd: steve.Rd:26-27: Dropping empty section \references
prepare_Rd: turtles.Rd:19: Dropping empty section \details
prepare_Rd: vasoc.Rd:18-20: Dropping empty section \details
prepare_Rd: wine.sugar.Rd:22-24: Dropping empty section \details
Loading this package had a fatal error status code 1
Loading log:
Loading required package: caTools
Error: package or namespace load failed for ‘caTools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Error: package ‘caTools’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fmbasics’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fmdates’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fmlogcondens’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geometry/libs/geometry.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geometry/libs/geometry.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fmriqa’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fmrs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fmrs/libs/fmrs.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fmrs/libs/fmrs.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FMsmsnReg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FMStable’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FMStable/libs/FMStable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FMStable/libs/FMStable.so: failed to map segment from shared object
Execution halted
'library' or 'require' call to ‘limma’ in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Found the following apparent S3 methods exported but not registered:
  fmt.default plot.fmt
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
fmt.default: no visible global function definition for ‘loessFit’
fmt.default: no visible global function definition for
  ‘trigammaInverse’
plot.fmt: no visible global function definition for ‘par’
plot.fmt: no visible global function definition for ‘plot’
plot.fmt: no visible global function definition for ‘points’
Undefined global functions or variables:
  loessFit par plot points trigammaInverse
Consider adding
  importFrom("graphics", "par", "plot", "points")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FNN’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FNN/libs/FNN.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FNN/libs/FNN.so: failed to map segment from shared object
Execution halted
Rd file 'foba.Rd':
  \usage lines wider than 90 characters:
     foba(x,y, type=c("foba","foba.aggressive", "foba.conservative", "forward","backward"), steps=0, intercept=TRUE, nu=0.5,lambda=1e-10) 

These lines will be truncated in the PDF manual.
S3 methods shown with full name in documentation object 'predict.foba':
  ‘predict.foba’

S3 methods shown with full name in documentation object 'print.foba':
  ‘print.foba’

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘focusedMDS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘foghorn’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fontHind’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fontMPlus’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘fontquiver-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: htmlFontDependency
> ### Title: Include font as CSS dependency
> ### Aliases: htmlFontDependency
> 
> ### ** Examples
> 
> # Create an htmlDependency object:
> dep <- htmlFontDependency(font_families("Bitstream Vera"))
Loading required namespace: htmltools
Failed with error:  ‘unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object’
Error: htmltools is not installed
Execution halted
Running examples in ‘foolbox-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: add_call_callback
> ### Title: Add a function-specific callback to the call callbacks.
> ### Aliases: add_call_callback
> 
> ### ** Examples
> 
> f <- function(x) 2 + x
> cb <- rewrite_callbacks() %>%
+    add_call_callback(f, function(expr, ...) {
+        quote(2 + x)
+    })
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: %>% ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘partial-evaluation.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘forams’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘forcats-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: fct_anon
> ### Title: Anonymise factor levels
> ### Aliases: fct_anon
> 
> ### ** Examples
> 
> gss_cat$relig %>% fct_count()
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: %>% ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Warning: executing %dopar% sequentially: no parallel backend registered

Error: processing vignette ‘foreach.Rnw’ failed with diagnostics:
 chunk 18 (label = ex12.load) 
Error : package or namespace load failed for ‘randomForest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForest/libs/randomForest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForest/libs/randomForest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: ifultools
Error: package or namespace load failed for ‘ifultools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/splus2R/libs/splus2R.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/splus2R/libs/splus2R.so: failed to map segment from shared object
Error: package ‘ifultools’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ForecastComb’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: R6
Error: package or namespace load failed for ‘ForecastFramework’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘forecast’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘forecastSNSTS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: parallel
Loading required package: forecast
Error: package or namespace load failed for ‘forecast’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘forecast’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘foreign’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/foreign/libs/foreign.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/foreign/libs/foreign.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tcltk
Loading required package: tcltk2
Loading required package: tkrplot
Error: package or namespace load failed for ‘forensim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/forensim/libs/forensim.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/forensim/libs/forensim.so: failed to map segment from shared object
In addition: Warning message:
loading Rplot failed 
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: GA
Loading required package: foreach
Loading required package: iterators
Error: package or namespace load failed for ‘GA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘GA’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘forestControl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘forestFloor’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForest/libs/randomForest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForest/libs/randomForest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘forestinventory’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘forestmangr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: grid
Loading required package: magrittr
Loading required package: checkmate
Error: package or namespace load failed for ‘checkmate’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so: failed to map segment from shared object
Error: package ‘checkmate’ could not be loaded
Execution halted
Running examples in ‘forestr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: calc_tls_mean_leaf_ht
> ### Title: Process single PCL transects.
> ### Aliases: calc_tls_mean_leaf_ht
> ### Keywords: processing tls
> 
> ### ** Examples
> 
> 
> # with designated file
> ## Not run: process_pcl("pcl_data.csv", marker.spacing = 10, user_height = 1.05, max.vai = 8)
> 
> 
> # with data frame
> process_pcl(osbs, marker.spacing = 10, user_height = 1.05, max.vai = 8)
Transect Length
[1] 40
Table of sky hits

FALSE  TRUE 
 3048  7458 
RAW LiDAR metrics -- WARNING
Mean Return Height (m) of raw data
[1] 10.76431
Standard Deviation of raw  Canopy Height returns-- meanStd in old code
[1] 3.569992
Max Measured Canopy Height (m)
[1] 14.827
Scan Density
[1] 262.65
OPENNESS AND COVER METRICS
Sky Fraction (%)
[1] 71.02181
Cover Fraction (%)
[1] 28.97819
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: process_pcl ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘pcl-vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Failed with error:  ‘package ‘sp’ could not be loaded’
Error in .requirePackage(package) : 
  unable to find required package ‘raster’
Calls: <Anonymous> ... withCallingHandlers -> is -> getClassDef -> .requirePackage
Execution halted
Running examples in ‘ForestTools-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: mcws
> ### Title: Marker-Controlled Watershed Segmentation
> ### Aliases: mcws
> 
> ### ** Examples
> 
> # Use variable window filter to detect treetops in demo canopy height model
> ttops <- vwf(CHMdemo, winFun = function(x){x * 0.06 + 0.5}, minHeight = 2)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sp/libs/sp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sp/libs/sp.so: failed to map segment from shared object
Calls: vwf ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘inventoryAttributes.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘forge-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: cast
> ### Title: Cast values into shape
> ### Aliases: cast cast_integer cast_scalar_integer cast_nullable_integer
> ###   cast_nullable_scalar_integer cast_integer_list
> ###   cast_nullable_integer_list cast_double cast_scalar_double
> ###   cast_nullable_double cast_nullable_scalar_double cast_double_list
> ###   cast_nullable_double_list cast_character cast_scalar_character
> ###   cast_nullable_character cast_nullable_scalar_character
> ###   cast_character_list cast_nullable_character_list cast_string
> ###   cast_nullable_string cast_string_list cast_nullable_string_list
> ###   cast_logical cast_scalar_logical cast_nullable_logical
> ###   cast_nullable_scalar_logical cast_logical_list
> ###   cast_nullable_logical_list cast_choice
> 
> ### ** Examples
> 
> # Cast a double vector to integer
> cast_integer(c(1, 2))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: cast_integer ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: homals
Error: package or namespace load failed for ‘homals’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Error: package ‘homals’ could not be loaded
Execution halted
INFCvpe: no visible binding for global variable ‘INFCstats’
INFCvpe: no visible binding for global variable ‘INFCdomain’
Undefined global functions or variables:
  INFCdomain INFCstats
Warning: no function found corresponding to methods exports from ‘FormalSeries’ for: ‘initialize’, ‘show’

A namespace must be able to be loaded with just the base namespace
loaded: otherwise if the namespace gets loaded by a saved object, the
session will be unable to start.

Probably some imports need to be declared in the NAMESPACE file.
&,fseries-numeric: no visible global function definition for ‘new’
*,fseries-fseries: no visible global function definition for ‘new’
*,fseries-numeric: no visible global function definition for ‘new’
*,numeric-fseries: no visible global function definition for ‘new’
+,fseries-fseries: no visible global function definition for ‘new’
+,fseries-numeric: no visible global function definition for ‘new’
+,numeric-fseries: no visible global function definition for ‘new’
-,fseries-ANY: no visible global function definition for ‘new’
-,fseries-numeric: no visible global function definition for ‘new’
-,numeric-fseries: no visible global function definition for ‘new’
/,fseries-numeric: no visible global function definition for ‘new’
[<-,fseries-matrix-missing-matrix: no visible global function
  definition for ‘new’
[<-,fseries-numeric-missing-numeric: no visible global function
  definition for ‘new’
initialize,fseries: no visible global function definition for
  ‘validObject’
rfseries,numeric-numeric-numeric: no visible global function definition
  for ‘runif’
rfseries,numeric-numeric-numeric: no visible global function definition
  for ‘rbinom’
rfseries,numeric-numeric-numeric: no visible global function definition
  for ‘new’
Undefined global functions or variables:
  new rbinom runif validObject
Consider adding
  importFrom("methods", "new", "validObject")
  importFrom("stats", "rbinom", "runif")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Error in re-building vignettes:
  ...
Error: processing vignette ‘formatR.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘formattable’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘formulize’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Overview.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘FossilSim-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: FossilSim
> ### Title: FossilSim: A package for simulating and plotting fossil and
> ###   taxonomy data
> ### Aliases: FossilSim FossilSim-package
> 
> ### ** Examples
> 
> # simulate a tree using TreeSim conditioned on tip number
> t = TreeSim::sim.bd.taxa(n = 10, numbsim = 1, lambda = 1, mu = 0.2)[[1]]
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nlme/libs/nlme.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nlme/libs/nlme.so: failed to map segment from shared object
Calls: :: ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘SAtree.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  fourierin_1d.cpp:55:13: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
  fourierin_1d.cpp:77:17: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
  fourierin_2d.cpp:107:9: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
  fourierin_2d.cpp:146:12: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
  fourierin_cx_1d.cpp:55:13: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
  fourierin_cx_1d.cpp:77:17: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
  fourierin_cx_2d.cpp:104:9: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
  fourierin_cx_2d.cpp:143:12: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/fourierin.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fourierin’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fourPNO’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘fpCompare.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fpc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fpeek’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fpmoutliers’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Packages suggested but not available for checking:
  'Rsocp', 'Rnlminb2', 'Rdonlp2'
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fpow’:
 .onLoad failed in loadNamespace() for ‘fpow’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fpow/libs/fpow.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fpow/libs/fpow.so: failed to map segment from shared object
Execution halted
Non-standard files/directories found at top level:
  ‘Calling’ ‘Done’ ‘filters.R’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fracdiff’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fracdiff/libs/fracdiff.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fracdiff/libs/fracdiff.so: failed to map segment from shared object
Execution halted
'library' or 'require' calls in package code:
  ‘pcaPP’ ‘snowFT’ ‘wavelets’
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
ComputeDCT2FFT: no visible global function definition for ‘fft’
ComputeSemipgramFFT: no visible global function definition for ‘fft’
WaveVarFD: no visible global function definition for ‘modwt’
do.fd.estimate: no visible global function definition for
  ‘performParallel’
do.fd.estimate2d.simple: no visible global function definition for
  ‘median’
fd.Genton: no visible global function definition for ‘qn’
fd.estimate.matrix: no visible global function definition for
  ‘performParallel’
fd.plot.legend: no visible global function definition for ‘legend’
fd.plot.loglog: no visible global function definition for ‘plot’
fd.plot.loglog: no visible global function definition for ‘points’
fd.plot.loglog: no visible global function definition for ‘abline’
summary.FractalDim: no visible binding for global variable ‘sd’
Undefined global functions or variables:
  abline fft legend median modwt performParallel plot points qn sd
Consider adding
  importFrom("graphics", "abline", "legend", "plot", "points")
  importFrom("stats", "fft", "median", "sd")
to your NAMESPACE file.
Running examples in ‘fractaldim-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: fd.estim.method
> ### Title: Estimation of Fractal Dimension via Specific Methods
> ### Aliases: fd.estim.method fd.estim.variation fd.estim.variogram
> ###   fd.estim.madogram fd.estim.rodogram fd.estim.genton fd.estim.incr1
> ###   fd.estim.hallwood fd.estim.boxcount fd.estim.periodogram
> ###   fd.estim.dctII fd.estim.wavelet fd.estim.transect.var
> ###   fd.estim.transect.incr1 fd.estim.isotropic fd.estim.squareincr
> ###   fd.estim.filter1
> ### Keywords: ts spatial
> 
> ### ** Examples
> 
> library(RandomFields)
Loading required package: sp
Error: package or namespace load failed for ‘sp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘sp’ could not be loaded
Execution halted
Running ‘run_tests.R’ [0s/0s]
  Running ‘test_functions.R’ [0s/0s]
Running the tests in ‘tests/run_tests.R’ failed.
Complete output:
  > library(fractaldim)
  Loading required package: abind
  > library(RandomFields)
  Loading required package: sp
  Error: package or namespace load failed for 'sp' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
  Error: package 'sp' could not be loaded
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: splus2R
Error: package or namespace load failed for ‘splus2R’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/splus2R/libs/splus2R.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/splus2R/libs/splus2R.so: failed to map segment from shared object
Error: package ‘splus2R’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: futile.any
Loading required package: lambda.r
Loading required package: futile.logger
Loading required package: timeDate
Loading required package: quantmod
Loading required package: xts
Loading required package: zoo
Error: package or namespace load failed for ‘zoo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘zoo’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fractional’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fragilityindex’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: stats4
Loading required package: bbmle
Error: package or namespace load failed for ‘bbmle’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘bbmle’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Frames2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘franc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: cccp
Error: package or namespace load failed for ‘cccp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘cccp’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: CCP
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Running examples in ‘fredr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: fredr_docs
> ### Title: Open the web documentation for a certain FRED API topic.
> ### Aliases: fredr_docs
> 
> ### ** Examples
> 
> fredr_docs()
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Calls: fredr_docs ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘fredr-categories.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: magrittr
Loading required package: magic
Loading required package: abind
Loading required package: plyr
Error: package or namespace load failed for ‘plyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘plyr’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘freeknotsplines’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/freeknotsplines/libs/freeknotsplines.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/freeknotsplines/libs/freeknotsplines.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: smacof
Loading required package: plotrix
Error: package or namespace load failed for ‘smacof’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘smacof’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘freestats’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘freesurfer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘freetypeharfbuzz’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/freetypeharfbuzz/libs/freetypeharfbuzz.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/freetypeharfbuzz/libs/freetypeharfbuzz.so: failed to map segment from shared object
Execution halted
Package suggested but not available for checking: ‘GenABEL’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FREGAT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  c_hd_mf.cpp:157:12: warning: explicitly assigning value of variable of type 'Eigen::VectorXd' (aka 'Matrix<double, Dynamic, 1>') to itself [-Wself-assign-overloaded]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/FRegSigCom.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FreqProf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘frequencies’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: vars
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘freqweights’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/biglm/libs/biglm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/biglm/libs/biglm.so: failed to map segment from shared object
Execution halted
Non-standard file/directory found at top level:
  ‘FrF2.catlg128-Ex.R’
Loading this package had a fatal error status code 1
Loading log:
Loading required package: DoE.base
Loading required package: grid
Loading required package: conf.design
Error: package or namespace load failed for ‘DoE.base’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘DoE.base’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘frite’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Packages suggested but not available for checking: 'dggrids', 'INLA'
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FRK’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fromo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: micEcon
Error: package or namespace load failed for ‘micEcon’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘micEcon’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: classInt
Loading required package: spData
To access larger datasets in this package, install the spDataLarge
package with: `install.packages('spDataLarge',
repos='https://nowosad.github.io/drat/', type='source')`
Error: package or namespace load failed for ‘classInt’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so: failed to map segment from shared object
Error: package ‘classInt’ could not be loaded
Execution halted
prepare_Rd: frt.Rd:21: Dropping empty section \note
prepare_Rd: frt.paired.Rd:23: Dropping empty section \note
prepare_Rd: shoes.Rd:19: Dropping empty section \details
prepare_Rd: shoes.Rd:21-22: Dropping empty section \references
prepare_Rd: tomatoes.Rd:16: Dropping empty section \details
prepare_Rd: tomatoes.Rd:18: Dropping empty section \references
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FSA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FSelector’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForest/libs/randomForest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForest/libs/randomForest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FSelectorRcpp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FSInteract’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FSMUMI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: labdsv
Loading required package: mgcv
Loading required package: nlme
Error: package or namespace load failed for ‘nlme’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘nlme’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘fsthet-vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: CompQuadForm
Error: package or namespace load failed for ‘CompQuadForm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/CompQuadForm/libs/CompQuadForm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/CompQuadForm/libs/CompQuadForm.so: failed to map segment from shared object
Error: package ‘CompQuadForm’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fst’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Non-standard files/directories found at top level:
  ‘COPYRIGHT’ ‘pmden.R’
Copyright information should be in file inst/COPYRIGHTS
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ftnonpar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ftnonpar/libs/ftnonpar.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ftnonpar/libs/ftnonpar.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FTRLProximal’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘ftsspec-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: Spec_compare_localize_freq_curvelength
> ### Title: Compare the spectral density operator of two Functional Time
> ###   Series and localize frequencies at which they differ, and (spatial)
> ###   regions where they differ
> ### Aliases: Spec_compare_localize_freq_curvelength
> 
> ### ** Examples
> 
> ma.scale2=ma.scale1=c(-1.4,2.3,-2)
> ma.scale2[3] = ma.scale1[3]+.4
> a1=Generate_filterMA(10, 10, MA.len=3, ma.scale=ma.scale1)
> a2=Generate_filterMA(10, 10, MA.len=3, ma.scale=ma.scale2)
> X=Simulate_new_MA(a1, T.len=2^9, noise.type='wiener')
> Y=Simulate_new_MA(a2, T.len=2^9, noise.type='wiener')
> ans0=Spec_compare_localize_freq_curvelength(X, Y, W=Epanechnikov_kernel, alpha=.01, demean=TRUE)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: Spec_compare_localize_freq_curvelength ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fullfact’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fulltext’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘funbarRF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘funchir’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FunChisq’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Non-standard file/directory found at top level:
  ‘copying’
Running examples in ‘FuncMap-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: FuncMap
> ### Title: Hive Plots of R Package Function Calls
> ### Aliases: FuncMap
> ### Keywords: hplot
> 
> ### ** Examples
> 
> require(mvbutils)
Loading required package: mvbutils

Attaching package: ‘mvbutils’

The following object is masked from ‘package:graphics’:

    clip

The following objects are masked from ‘package:utils’:

    ?, help

The following objects are masked from ‘package:base’:

    print.default, print.function, rbind, rbind.data.frame

> require(lattice)
Loading required package: lattice
Error: package or namespace load failed for ‘lattice’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
> require(grid)
Loading required package: grid
> # draw the foodweb using mvbutils
> fw <- foodweb(where = "package:lattice", charlim = 20, cex = 0.5, lwd = 1)
Error in as.environment(x) : 
  no item called "package:lattice" on the search list
Calls: foodweb ... unlist -> lapply -> FUN -> lapply -> FUN -> as.env.character
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: breastCancerVDX
Loading required package: Biobase
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: ‘BiocGenerics’

The following objects are masked from ‘package:parallel’:

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from ‘package:stats’:

    IQR, mad, sd, var, xtabs

The following objects are masked from ‘package:base’:

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, basename, cbind, colMeans, colSums, colnames,
    dirname, do.call, duplicated, eval, evalq, get, grep, grepl,
    intersect, is.unsorted, lapply, mapply, match, mget, order, paste,
    pmax, pmax.int, pmin, pmin.int, rank, rbind, rowMeans, rowSums,
    rownames, sapply, setdiff, sort, table, tapply, union, unique,
    unsplit, which, which.max, which.min

Error: package or namespace load failed for ‘Biobase’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Biobase/libs/Biobase.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Biobase/libs/Biobase.so: failed to map segment from shared object
Error: package ‘Biobase’ could not be loaded
Execution halted
Running examples in ‘funData-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: approxNA
> ### Title: Approximate missing values for funData objects
> ### Aliases: approxNA
> 
> ### ** Examples
> 
> # Simulate some data
> f <- simFunData(N = 10, M = 8, eVal = "linear", eFun = "Poly", argvals = seq(0, 1, 0.01))$simData
> 
> # Sparsify, i.e. generate artificial missings in the data
> fSparse <- sparsify(f, minObs = 10, maxObs = 50)
> 
> # plot
> oldpar <- par(no.readonly = TRUE)
> par(mfrow = c(1,3))
> plot(f, main = "Original Data") 
> plot(fSparse, main = "Sparse Data")
> plot(approxNA(fSparse), main = "Reconstructed Data")
Warning in approxNA(fSparse) :
  Package zoo needed for interpolating missing values in plot for funData. Ignoring plotNA = TRUE.
Warning in xy.coords(x, y, xlabel, ylabel, log) :
  NAs introduced by coercion
Warning in min(x) : no non-missing arguments to min; returning Inf
Warning in max(x) : no non-missing arguments to max; returning -Inf
Error in plot.window(...) : need finite 'ylim' values
Calls: plot -> plot -> plot.default -> localWindow -> plot.window
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fungible’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘funnelR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘funrar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘funreg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘funtimes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘furniture’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fuser’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fusionclust’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running ‘run_tests.R’ [0s/0s]
Running the tests in ‘tests/run_tests.R’ failed.
Complete output:
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Packages in Depends field not imported from:
  ‘RUnit’ ‘futile.options’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
.validateGuardExpression: no visible global function definition for
  ‘runif’
Undefined global functions or variables:
  runif
Consider adding
  importFrom("stats", "runif")
to your NAMESPACE file.
Error in re-building vignettes:
  ...
Error: processing vignette ‘bayesianIncidenceRateModel.Rnw’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘futureheatwaves’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘future’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘fuzzr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: fuzz_function
> ### Title: Fuzz-test a function
> ### Aliases: fuzz_function p_fuzz_function
> 
> ### ** Examples
> 
> # Evaluate the 'formula' argument of lm, passing additional required variables
> fr <- fuzz_function(lm, "formula", data = iris)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: fuzz_function ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘fuzzr.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
fuzzyBHexact: warning in round(pvals, d = dp): partial argument match
  of ‘d’ to ‘digits’
fuzzyBHexact: warning in round(pprev, d = dp): partial argument match
  of ‘d’ to ‘digits’
fuzzyBHexact: warning in round(p.minus, d = 4): partial argument match
  of ‘d’ to ‘digits’
fuzzyBHexact: warning in round(p.plus, d = 4): partial argument match
  of ‘d’ to ‘digits’
fuzzyBHexact: warning in round(a.minus, d = 4): partial argument match
  of ‘d’ to ‘digits’
fuzzyBHexact: warning in round(a.plus, d = 4): partial argument match
  of ‘d’ to ‘digits’
fuzzyBHexact: warning in round(new.p.minus, d = 4): partial argument
  match of ‘d’ to ‘digits’
fuzzyBHexact: warning in round(new.p.plus, d = 4): partial argument
  match of ‘d’ to ‘digits’
fuzzyBHexact: warning in round(pvals, d = 4): partial argument match of
  ‘d’ to ‘digits’
fuzzyBHexact: warning in round(pprev, d = 4): partial argument match of
  ‘d’ to ‘digits’
fuzzyBHexact: warning in round(tau, d = 4): partial argument match of
  ‘d’ to ‘digits’
probRejTies: no visible binding for global variable ‘nn’
Undefined global functions or variables:
  nn
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fuzzyforest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fuzzyjoin’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FuzzyLP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FuzzyMCDM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘FuzzyNumbersTutorial.Rnw’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fuzzyRankTests’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fuzzyRankTests/libs/fuzzyRankTests.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fuzzyRankTests/libs/fuzzyRankTests.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fuzzyreg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lpSolve/libs/lpSolve.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lpSolve/libs/lpSolve.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FuzzyR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FuzzyStatProb’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/DEoptim/libs/DEoptim.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/DEoptim/libs/DEoptim.so: failed to map segment from shared object
Execution halted
NeedsCompilation field must take value ‘yes’ or ‘no’
'library' or 'require' call to ‘splines’ which was already attached by Depends.
  Please remove these calls from your code.
Package in Depends field not imported from: ‘splines’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
gensurf: no visible global function definition for ‘persp’
gensurf: no visible global function definition for ‘rainbow’
plotMF: no visible global function definition for ‘plot.new’
plotMF: no visible global function definition for ‘plot.window’
plotMF: no visible global function definition for ‘runif’
plotMF: no visible global function definition for ‘predict’
plotMF: no visible global function definition for ‘interpSpline’
plotMF: no visible global function definition for ‘lines’
plotMF: no visible global function definition for ‘text’
plotMF: no visible global function definition for ‘title’
plotMF: no visible global function definition for ‘axis’
plotMF: no visible global function definition for ‘box’
Undefined global functions or variables:
  axis box interpSpline lines persp plot.new plot.window predict
  rainbow runif text title
Consider adding
  importFrom("grDevices", "rainbow")
  importFrom("graphics", "axis", "box", "lines", "persp", "plot.new",
             "plot.window", "text", "title")
  importFrom("stats", "predict", "runif")
to your NAMESPACE file.
Rd file 'newFIS.Rd':
  \usage lines wider than 90 characters:
     newFIS(FISName, FISType = "mamdani", version = "1.0", andMethod = "min", orMethod = "max", impMethod = "min", aggMethod = "max", defuzz ... [TRUNCATED]

These lines will be truncated in the PDF manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fuzzywuzzyR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
alpha: no visible global function definition for ‘var’
coefH: no visible global function definition for ‘var’
coefZ: no visible global function definition for ‘var’
coefZ: no visible binding for global variable ‘var’
fs.MSA: no visible global function definition for ‘runif’
fs.MSA: no visible global function definition for ‘boxplot’
plot.fs.class: no visible global function definition for ‘lines’
plot.fs.class: no visible global function definition for ‘text’
plot.fs.class: no visible global function definition for ‘axis’
plot.fs.class: no visible global function definition for ‘segments’
plot.fs.class: no visible global function definition for ‘title’
plot.fs.class: no visible global function definition for
  ‘devAskNewPage’
plot.fs.class : <anonymous>: no visible global function definition for
  ‘quantile’
plot.fs.n1.class: no visible global function definition for ‘segments’
plot.fs.n1.class: no visible global function definition for ‘axis’
plot.fs.n1.class: no visible global function definition for ‘lines’
plot.fs.n1.class: no visible global function definition for ‘legend’
search.normal: no visible global function definition for ‘var’
search.normal: no visible binding for global variable ‘var’
search.normal: no visible global function definition for ‘qnorm’
Undefined global functions or variables:
  axis boxplot devAskNewPage legend lines qnorm quantile runif segments
  text title var
Consider adding
  importFrom("grDevices", "devAskNewPage")
  importFrom("graphics", "axis", "boxplot", "legend", "lines",
             "segments", "text", "title")
  importFrom("stats", "qnorm", "quantile", "runif", "var")
to your NAMESPACE file.
Rd file 'fwdmsa-package.Rd':
  \examples lines wider than 100 characters:
        plot(fs1.1, type="objective", observations=1:618, col="gray70", n0=TRUE, n1=fs.res.cont.n1$n1, xlim=c(0,650))

These lines will be truncated in the PDF manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘FWDselect’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘fwsim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘g2f’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/png/libs/png.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/png/libs/png.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘G2Sd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘g3viz’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
crossover: no visible global function definition for ‘runif’
exchangeSols: no visible global function definition for ‘runif’
fps: no visible global function definition for ‘runif’
mutation: no visible global function definition for ‘runif’
plotBicluster: no visible global function definition for ‘gray’
plotBicluster: no visible global function definition for ‘heatmap’
reproduction: no visible global function definition for ‘runif’
Undefined global functions or variables:
  gray heatmap runif
Consider adding
  importFrom("grDevices", "gray")
  importFrom("stats", "heatmap", "runif")
to your NAMESPACE file.
FPTsimul: no visible global function definition for ‘runif’
histplot: no visible global function definition for ‘dev.new’
histplot: no visible global function definition for ‘hist’
histplot: no visible global function definition for ‘par’
histplot: no visible global function definition for ‘plot’
histplot: no visible global function definition for ‘legend’
mdt: no visible binding for global variable ‘deltat’
plot.FPTdensity: no visible global function definition for ‘dev.new’
plot.FPTdensity: no visible global function definition for ‘plot’
res_summary: no visible global function definition for ‘write.table’
res_summary: no visible global function definition for ‘sd’
res_summary: no visible global function definition for ‘median’
vdt: no visible binding for global variable ‘deltat’
Undefined global functions or variables:
  deltat dev.new hist legend median par plot runif sd write.table
Consider adding
  importFrom("grDevices", "dev.new")
  importFrom("graphics", "hist", "legend", "par", "plot")
  importFrom("stats", "deltat", "median", "runif", "sd")
  importFrom("utils", "write.table")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gafit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gafit/libs/gafit.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gafit/libs/gafit.so: failed to map segment from shared object
Execution halted
CI.RMSEA: no visible global function definition for ‘qchisq’
CI.RMSEA: no visible global function definition for ‘pchisq’
GAIPE.RMSEA: no visible global function definition for ‘par’
GAIPE.RMSEA: no visible global function definition for ‘plot’
GAIPE.RMSEA: no visible global function definition for ‘abline’
GAIPE.RMSEA: no visible global function definition for ‘colors’
GAIPE.RMSEA: no visible global function definition for ‘text’
GAIPE.RMSEA: no visible global function definition for ‘arrows’
GAIPE.RMSEA: no visible global function definition for ‘points’
GAIPE.RMSEA: no visible global function definition for ‘axis’
GAIPE.RMSEA: no visible global function definition for ‘lines’
GAIPE.RMSEA: no visible global function definition for ‘legend’
GAIPE.RMSEA: no visible global function definition for ‘pchisq’
GAIPE.RMSEA: no visible global function definition for ‘qchisq’
GAIPE.RMSEA: no visible global function definition for ‘mtext’
GAIPE.RMSEA: no visible global function definition for ‘title’
PA.RMSEA: no visible global function definition for ‘pchisq’
PA.RMSEA: no visible global function definition for ‘qchisq’
Undefined global functions or variables:
  abline arrows axis colors legend lines mtext par pchisq plot points
  qchisq text title
Consider adding
  importFrom("grDevices", "colors")
  importFrom("graphics", "abline", "arrows", "axis", "legend", "lines",
             "mtext", "par", "plot", "points", "text", "title")
  importFrom("stats", "pchisq", "qchisq")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: R.oo
Loading required package: R.methodsS3
R.methodsS3 v1.7.1 (2016-02-15) successfully loaded. See ?R.methodsS3 for help.
R.oo v1.22.0 (2018-04-21) successfully loaded. See ?R.oo for help.

Attaching package: ‘R.oo’

The following objects are masked from ‘package:methods’:

    getClasses, getMethods

The following objects are masked from ‘package:base’:

    attach, detach, gc, load, save

Error: package or namespace load failed for ‘galgo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: genalg
Loading required package: DEoptim
Loading required package: parallel
Error: package or namespace load failed for ‘DEoptim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/DEoptim/libs/DEoptim.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/DEoptim/libs/DEoptim.so: failed to map segment from shared object
Error: package ‘DEoptim’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gambin’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gamboostMSM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Non-standard files/directories found at top level:
  ‘changeLog’ ‘gnugpl2.txt’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gamclass’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gamCopula’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: splines
Loading required package: gam
Loading required package: foreach
Error: package or namespace load failed for ‘gam’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gam/libs/gam.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gam/libs/gam.so: failed to map segment from shared object
Error: package ‘gam’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gamesGA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: gamlss.dist
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rpanel
Loading required package: tcltk
Package `rpanel', version 1.1-4: type help(rpanel) for summary information
Loading required package: gamlss.dist
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: splines
Loading required package: gamlss.data
Loading required package: gamlss.dist
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gamm4.test’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Found the following apparent S3 methods exported but not registered:
  print.Gammareg print.summary.Gammareg summary.Gammareg
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
gammahetero1: no visible global function definition for ‘terms’
gammahetero1: no visible global function definition for ‘model.matrix’
gammahetero1: no visible global function definition for ‘glm.fit’
gammahetero1: no visible global function definition for ‘Gamma’
gammahetero1: no visible global function definition for ‘qt’
gammahetero2: no visible global function definition for ‘terms’
gammahetero2: no visible global function definition for ‘model.matrix’
gammahetero2: no visible global function definition for ‘glm.fit’
gammahetero2: no visible global function definition for ‘Gamma’
gammahetero2: no visible global function definition for ‘qt’
print.summary.Gammareg: no visible global function definition for
  ‘printCoefmat’
summary.Gammareg: no visible global function definition for ‘coef’
Undefined global functions or variables:
  Gamma coef glm.fit model.matrix printCoefmat qt terms
Consider adding
  importFrom("stats", "Gamma", "coef", "glm.fit", "model.matrix",
             "printCoefmat", "qt", "terms")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: splines
Loading required package: foreach
Error: package or namespace load failed for ‘gam’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gam/libs/gam.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gam/libs/gam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gamreg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gamRR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: foreach
Loading required package: mda
Loading required package: class
Error: package or namespace load failed for ‘class’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so: failed to map segment from shared object
Error: package ‘class’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ganalytics’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Non-standard file/directory found at top level:
  ‘Read-and-delete-me’
Package in Depends field not imported from: ‘GANPAdata’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
prepare_Rd: GANPA-package.Rd:30: Dropping empty section \seealso
prepare_Rd: GANPA-package.Rd:31: Dropping empty section \examples
prepare_Rd: GSE.Test.Main.Rd:24: Dropping empty section \details
prepare_Rd: GSE.Test.Main.Rd:32: Dropping empty section \note
prepare_Rd: GSE.Test.Main.Rd:33: Dropping empty section \seealso
prepare_Rd: weight.gsets.test.Rd:14: Dropping empty section \details
prepare_Rd: weight.gsets.test.Rd:25: Dropping empty section \note
prepare_Rd: weight.gsets.with.msprot.Rd:17: Dropping empty section \details
prepare_Rd: weight.gsets.with.msprot.Rd:27: Dropping empty section \note
prepare_Rd: weight.gsets.with.msprot.Rd:31: Dropping empty section \examples
Rd file 'GSE.Test.Main.Rd':
  \usage lines wider than 90 characters:
     GSE.Test.Main(gExprs.obj, gsets, gNET, check.exprs = TRUE, msp.groups, size.min = 15, size.max = 500, permN = 1000, randN = 30, permFDR ... [TRUNCATED]
  \examples lines wider than 100 characters:
     # GSE.Test.Main(gExprs.obj=gExprs.p53, gsets=gsets.msigdb.pnas, gNET=gNET, check.exprs=TRUE, msp.groups=msp.groups, size.min=15, size.m ... [TRUNCATED]

These lines will be truncated in the PDF manual.
Running examples in ‘GAparsimony-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ga_parsimony
> ### Title: GA-PARSIMONY
> ### Aliases: ga_parsimony show,ga_parsimony-method
> ###   print,ga_parsimony-method print,ga_parsimony-method numericOrNA
> ### Keywords: optimize
> 
> ### ** Examples
> 
> 
> #################################
> ### Example 1: Classification ###
> #################################
> 
> # This a toy example that shows how to search, for the *iris* database, 
> # a parsimony classification NNET model with 'GAparsimony' 
> # and 'caret' packages. Validation errors and iterations have been
> # reduced to speedup the process
> 
> library(GAparsimony)
> # Training and testing Datasets
> library(caret)
Loading required package: lattice
Loading required package: ggplot2
Error: package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘ggplot2’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gapminder’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gap/libs/gap.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gap/libs/gap.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: foreach
Loading required package: iterators
Error: package or namespace load failed for ‘GA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: httr
Loading required package: jsonlite
Error: package or namespace load failed for ‘jsonlite’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Error: package ‘jsonlite’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gaselect’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gasfluxes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GAS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gastempt’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘gatepoints.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GauPro’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
'library' or 'require' call to ‘orthopolynom’ which was already attached by Depends.
  Please remove these calls from your code.
Packages in Depends field not imported from:
  ‘orthopolynom’ ‘polynom’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gazepath’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GB2group’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GB2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gbfs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GBJ’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SKAT/libs/SKAT.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SKAT/libs/SKAT.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gbm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: magrittr
Loading required package: data.table
Error: package or namespace load failed for ‘data.table’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Error: package ‘data.table’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: boot
Loading required package: KernSmooth
Error: package or namespace load failed for ‘KernSmooth’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KernSmooth/libs/KernSmooth.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KernSmooth/libs/KernSmooth.so: failed to map segment from shared object
Error: package ‘KernSmooth’ could not be loaded
Execution halted
Package in Depends field not imported from: ‘tools’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Unexported objects imported by ':::' calls:
  ‘tools:::.Rd_get_argument_names’ ‘tools:::RdTags’ ‘tools:::fetchRdDB’
  See the note in ?`:::` about the use of this operator.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gbts’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/earth/libs/earth.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/earth/libs/earth.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gbutils’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
coeplot: no visible global function definition for ‘plot’
coeplot: no visible global function definition for ‘axis’
coeplot: no visible global function definition for ‘lines’
coeplot: no visible global function definition for ‘title’
coeplot: no visible global function definition for ‘legend’
corplot: no visible global function definition for ‘par’
corplot: no visible global function definition for ‘pairs’
corplot: no visible global function definition for ‘strwidth’
lm.estimate: no visible global function definition for ‘as.formula’
lm.estimate: no visible global function definition for ‘glm’
panel.cor: no visible global function definition for ‘par’
panel.cor: no visible global function definition for ‘cor’
panel.cor: no visible global function definition for ‘strwidth’
panel.cor: no visible global function definition for ‘text’
panel.smooth.r: no visible global function definition for ‘par’
panel.smooth.r: no visible global function definition for ‘points’
panel.smooth.r: no visible global function definition for ‘lines’
posplot: no visible global function definition for ‘par’
posplot: no visible global function definition for ‘barplot’
posplot: no visible global function definition for ‘plot’
posplot: no visible global function definition for ‘points’
Undefined global functions or variables:
  as.formula axis barplot cor glm legend lines pairs par plot points
  strwidth text title
Consider adding
  importFrom("graphics", "axis", "barplot", "legend", "lines", "pairs",
             "par", "plot", "points", "strwidth", "text", "title")
  importFrom("stats", "as.formula", "cor", "glm")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GCalignR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gCat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gCat/libs/gCat.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gCat/libs/gCat.so: failed to map segment from shared object
Execution halted
Package suggested but not available for checking: ‘gputools’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gcbd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gcForest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gcite’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gcKrig’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gcmr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gconcord’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gconcord/libs/gconcord.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gconcord/libs/gconcord.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GCPM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gdalUtils’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Found the following calls to attach():
File ‘g.data/R/g.data.attach.R’:
  attach(NULL, pos, basename(dir))
See section ‘Good practice’ in ‘?attach’.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gdata’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tools
Error: package or namespace load failed for ‘GDELTtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GDINA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  cGetHCS.c:9:33: warning: using floating point absolute value function 'fabs' when argument is of integer type [-Wabsolute-value]
  cIdentical.c:9:34: warning: using floating point absolute value function 'fabs' when argument is of integer type [-Wabsolute-value]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/gdmp.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gdmp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gdmp/libs/gdmp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gdmp/libs/gdmp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gdns’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gdpc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GD’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gdtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gear’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gee4’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geepack’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geepack/libs/geepack.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geepack/libs/geepack.so: failed to map segment from shared object
Execution halted
Non-standard files/directories found at top level:
  ‘README.too’ ‘blurb’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gee’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gee/libs/gee.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gee/libs/gee.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geesmv’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Warning: namespace ‘rootSolve’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rootSolve’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rootSolve’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘rootSolve’ is not available and has been replaced
by .GlobalEnv when processing object ‘’

A namespace must be able to be loaded with just the base namespace
loaded: otherwise if the namespace gets loaded by a saved object, the
session will be unable to start.

Probably some imports need to be declared in the NAMESPACE file.
Running examples in ‘geex-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: coef,geex-method
> ### Title: Gets the parameter estimates from a geex object
> ### Aliases: coef,geex-method coef,geex,geex-method
> ###   coef,geex_summary-method
> 
> ### ** Examples
> 
> ex_eeFUN <- function(data){
+  function(theta){
+    with(data,
+     c(Y1 - theta[1],
+      (Y1 - theta[1])^2 - theta[2] ))
+ }}
> 
> results <- m_estimate(
+  estFUN = ex_eeFUN,
+  data  = geexex,
+  root_control = setup_root_control(start = c(1,1)))
Error in is.compiled(f) : could not find function "is.compiled"
Calls: m_estimate -> estimate_GFUN_roots -> do.call -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘v00_geex_intro.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geigen’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geigen/libs/geigen.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geigen/libs/geigen.so: failed to map segment from shared object
Execution halted
Running examples in ‘GEint-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: GE_BICS
> ### Title: GE_BICS.R
> ### Aliases: GE_BICS
> 
> ### ** Examples
> 
> E <- rnorm(n=500)
> G <- rbinom(n=500, size=2, prob=0.3)
> design_mat <- cbind(1, G, E, G*E)
> outcome <- rnorm(500)
> GE_BICS(outcome=outcome, design_mat=design_mat, desired_coef=4, outcome_type='C')
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geepack/libs/geepack.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geepack/libs/geepack.so: failed to map segment from shared object
Calls: GE_BICS ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘GEint_example.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gelnet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gelnet/libs/gelnet.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gelnet/libs/gelnet.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: signal
Error: package or namespace load failed for ‘signal’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘signal’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gems’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GenAlgo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mclust/libs/mclust.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mclust/libs/mclust.so: failed to map segment from shared object
Execution halted
plot.rbga: no visible global function definition for ‘par’
plot.rbga: no visible global function definition for ‘hist’
plot.rbga: no visible global function definition for ‘plot’
plot.rbga: no visible global function definition for ‘lines’
rbga: no visible global function definition for ‘runif’
rbga: no visible global function definition for ‘dnorm’
rbga.bin: no visible global function definition for ‘dnorm’
rbga.bin: no visible global function definition for ‘runif’
Undefined global functions or variables:
  dnorm hist lines par plot runif
Consider adding
  importFrom("graphics", "hist", "lines", "par", "plot")
  importFrom("stats", "dnorm", "runif")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: Kendall
Error: package or namespace load failed for ‘Kendall’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Kendall/libs/Kendall.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Kendall/libs/Kendall.so: failed to map segment from shared object
Error: package ‘Kendall’ could not be loaded
Execution halted
Running examples in ‘genBaRcode-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: errorCorrection
> ### Title: Error Correction
> ### Aliases: errorCorrection
> 
> ### ** Examples
> 
> errorCorrection(BC_dat, maxDist = 8, save_it = FALSE, m = "hamming")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringdist/libs/stringdist.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringdist/libs/stringdist.so: failed to map segment from shared object
Calls: errorCorrection ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘genBart’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
clopper.pearson.ci: no visible global function definition for ‘qbeta’
cm.clopper.pearson.ci: no visible global function definition for
  ‘uniroot’
cm.clopper.pearson.ci : <anonymous>: no visible global function
  definition for ‘pbeta’
cm.n.clopper.pearson: no visible global function definition for
  ‘uniroot’
cm.n.clopper.pearson : <anonymous>: no visible global function
  definition for ‘pbeta’
n.clopper.pearson: no visible global function definition for ‘uniroot’
n.clopper.pearson : <anonymous>: no visible global function definition
  for ‘pbeta’
rgbinom: no visible global function definition for ‘runif’
Undefined global functions or variables:
  pbeta qbeta runif uniroot
Consider adding
  importFrom("stats", "pbeta", "qbeta", "runif", "uniroot")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gencve’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lars/libs/lars.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lars/libs/lars.so: failed to map segment from shared object
Execution halted
genmvnorm: no visible global function definition for ‘rnorm’
Undefined global functions or variables:
  rnorm
Consider adding
  importFrom("stats", "rnorm")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘genderBR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘genderizeR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Package suggested but not available for checking: ‘genderdata’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gender’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GeneClusterNet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
t1p1: no visible global function definition for ‘var’
t1p1: no visible global function definition for ‘pt’
t1p2: no visible global function definition for ‘pt’
Undefined global functions or variables:
  pt var
Consider adding
  importFrom("stats", "pt", "var")
to your NAMESPACE file.
Rd file 'flexorhtest.Rd':
  \examples lines wider than 100 characters:
          plot(x,y, main="Location and Strong Order Restrictions",cex.axis=1.5, cex.lab=1.5, cex.main=1.5, cex=1.5)

These lines will be truncated in the PDF manual.
load.genelist: no visible global function definition for ‘read.delim’
Undefined global functions or variables:
  read.delim
Consider adding
  importFrom("utils", "read.delim")
to your NAMESPACE file.
Rd file 'geneListPie-package.Rd':
  \examples lines wider than 100 characters:
     glist<-c("ABCB7","ABCF1","ABHD2","ACAD9","ACIN1","AMOTL1","ANLN","ANXA4","APBA2","APBA3","BAI3","BCLAF1","BEST1")

Rd file 'geneListProfile.Rd':
  \examples lines wider than 100 characters:
     glist<-c("ABCB7","ABCF1","ABHD2","ACAD9","ACIN1","AMOTL1","ANLN","ANXA4","APBA2","APBA3","BAI3","BCLAF1","BEST1")

These lines will be truncated in the PDF manual.
Running examples in ‘genemodel-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: genemodel.plot
> ### Title: genemodel.plot
> ### Aliases: genemodel.plot
> 
> ### ** Examples
> 
> data(AT5G62640)
> genemodel.plot(AT5G62640, 25149433, 25152541, "reverse", xaxis=TRUE)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: genemodel.plot ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Package suggested but not available for checking: ‘RHugin’
Loading this package had a fatal error status code 1
Loading log:
Loading required package: Rgraphviz
Loading required package: graph
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: ‘BiocGenerics’

The following objects are masked from ‘package:parallel’:

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from ‘package:stats’:

    IQR, mad, sd, var, xtabs

The following objects are masked from ‘package:base’:

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, basename, cbind, colMeans, colSums, colnames,
    dirname, do.call, duplicated, eval, evalq, get, grep, grepl,
    intersect, is.unsorted, lapply, mapply, match, mget, order, paste,
    pmax, pmax.int, pmin, pmin.int, rank, rbind, rowMeans, rowSums,
    rownames, sapply, setdiff, sort, table, tapply, union, unique,
    unsplit, which, which.max, which.min

Error: package or namespace load failed for ‘graph’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/graph/libs/BioC_graph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/graph/libs/BioC_graph.so: failed to map segment from shared object
Error: package ‘graph’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: corpcor
Loading required package: longitudinal
Loading required package: fdrtool
Error: package or namespace load failed for ‘fdrtool’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fdrtool/libs/fdrtool.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fdrtool/libs/fdrtool.so: failed to map segment from shared object
Error: package ‘fdrtool’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘genepi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/genepi/libs/genepi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/genepi/libs/genepi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘genepop’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: np
Error: package or namespace load failed for ‘np’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘np’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GeneralizedHyperbolic’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GeneralizedUmatrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: splines
Loading required package: igraph
Error: package or namespace load failed for ‘igraph’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Error: package ‘igraph’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GenEst’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘tutorial.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: combinat

Attaching package: ‘combinat’

The following object is masked from ‘package:utils’:

    combn

Loading required package: gdata
Error: package or namespace load failed for ‘gdata’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Error: package ‘gdata’ could not be loaded
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘GeneticSubsetterUsersGuide.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GeNetIt’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘genie’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geniusr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘genMOSSplus’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/genMOSSplus/libs/genMOSSplus.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/genMOSSplus/libs/genMOSSplus.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geno2proteo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/S4Vectors/libs/S4Vectors.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/S4Vectors/libs/S4Vectors.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘genogeographer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘genomic.autocorr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GenomicMating’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: gMWT
Loading required package: clinfun
Error: package or namespace load failed for ‘clinfun’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Error: package ‘clinfun’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘genotypeR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: diagram
Loading required package: shape
Loading required package: mice
Loading required package: lattice
Error: package or namespace load failed for ‘lattice’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘lattice’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GenSA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/GenSA/libs/GenSA.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/GenSA/libs/GenSA.so: failed to map segment from shared object
Execution halted
Found the following apparent S3 methods exported but not registered:
  predict.gensemble print.gensemble
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
ab.create: no visible global function definition for ‘new’
ab.predict: no visible binding for global variable ‘predict’
gensemble: no visible global function definition for ‘new’
perturb: no visible global function definition for ‘rnorm’
pred_error: no visible global function definition for ‘na.omit’
reg_iter_summary: no visible global function definition for ‘var’
reg_iter_summary: no visible global function definition for ‘cor’
Undefined global functions or variables:
  cor na.omit new predict rnorm var
Consider adding
  importFrom("methods", "new")
  importFrom("stats", "cor", "na.omit", "predict", "rnorm", "var")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Rd file 'AbstractModel-class.Rd':
  \examples lines wider than 100 characters:
     abm <- ab.create(model.call="ksvm", model.args=ksvm_model_args, predict.args=list(type="probabilities"), xtrans=as.matrix)
     abm <- ab.create(model.call="rpart", model.args=list(control=rpart.control(minsplit=0)), predict.args=list(type='prob'))
     abm <- ab.create(model.call="nnet", model.args=list(size=3, linout=TRUE, maxit=400, rang=0.001, decay=0.0001), xtrans=as.matrix)
     abm <- ab.create(model.call="rpart", model.args=list(method='anova', control=rpart.control(minsplit=2, cp=1e-03)))

Rd file 'predict.gensemble.Rd':
  \usage lines wider than 90 characters:
     predict(object, X, type = c("prob", "class"), method = c("prob", "vote"), return.all = F, ...)

These lines will be truncated in the PDF manual.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: mvmesh
Loading required package: rcdd
Error: package or namespace load failed for ‘rcdd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rcdd/libs/rcdd.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rcdd/libs/rcdd.so: failed to map segment from shared object
Error: package ‘rcdd’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘genSurv’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/genSurv/libs/genSurv.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/genSurv/libs/genSurv.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gensvm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gensvm/libs/gensvm_wrapper.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gensvm/libs/gensvm_wrapper.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GenWin’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/pspline/libs/pspline.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/pspline/libs/pspline.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geoaxe’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geoBayes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geoCount’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geodetector’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geodist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geodist/libs/geodist.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geodist/libs/geodist.so: failed to map segment from shared object
Execution halted
Files named as vignettes but with no recognized vignette engine:
   ‘inst/doc/docs.Rmd’
   ‘inst/doc/rd.Rmd’
(Is a VignetteBuilder field missing?)
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geofacet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geoGAM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: RandomFields
Loading required package: sp
Error: package or namespace load failed for ‘sp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘sp’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geogrid’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geojsonio’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geojsonlint’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geojson’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lazyeval/libs/lazyeval.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lazyeval/libs/lazyeval.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geojsonR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geojsonsf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geoknife’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Rd file 'fujitopo.Rd':
  \examples lines wider than 100 characters:
     PLOC=list(LON=range(fujitopo$lon), x=range(fujitopo$lon), LAT=range(fujitopo$lat), y=range(fujitopo$lat))

These lines will be truncated in the PDF manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GEOmap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GeomComb’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geomerge’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geometa’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: magic
Loading required package: abind
Error: package or namespace load failed for ‘geometry’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geometry/libs/geometry.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geometry/libs/geometry.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GeoMongo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
getJson: no visible global function definition for ‘URLencode’
Undefined global functions or variables:
  URLencode
Consider adding
  importFrom("utils", "URLencode")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: geometa
Error: package or namespace load failed for ‘geometa’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Error: package ‘geometa’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geoops’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geoparser’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geophys’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rwave/libs/Rwave.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rwave/libs/Rwave.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GeoRange’:
 .onLoad failed in loadNamespace() for ‘proj4’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/proj4/libs/proj4.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/proj4/libs/proj4.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: parallel
Loading required package: snowfall
Loading required package: snow

Attaching package: ‘snow’

The following objects are masked from ‘package:parallel’:

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, clusterSplit, makeCluster, parApply,
    parCapply, parLapply, parRapply, parSapply, splitIndices,
    stopCluster

Loading required package: sp
Error: package or namespace load failed for ‘sp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘sp’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geoR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geosapi’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
geoscaleBox: no visible global function definition for ‘boxplot’
geoscaleBox: no visible global function definition for ‘par’
geoscaleBox: no visible global function definition for ‘plot’
geoscaleBox: no visible global function definition for ‘text’
geoscaleBox: no visible global function definition for ‘segments’
geoscaleBox: no visible global function definition for ‘rect’
geoscaleBox: no visible global function definition for ‘rgb’
geoscaleBox: no visible global function definition for ‘polygon’
geoscaleBox: no visible global function definition for ‘points’
geoscaleBox: no visible global function definition for ‘axis’
geoscalePlot: no visible global function definition for ‘par’
geoscalePlot: no visible global function definition for ‘plot’
geoscalePlot: no visible global function definition for ‘text’
geoscalePlot: no visible global function definition for ‘segments’
geoscalePlot: no visible global function definition for ‘rect’
geoscalePlot: no visible global function definition for ‘rgb’
geoscalePlot: no visible global function definition for ‘points’
geoscalePlot: no visible global function definition for ‘axis’
Undefined global functions or variables:
  axis boxplot par plot points polygon rect rgb segments text
Consider adding
  importFrom("grDevices", "rgb")
  importFrom("graphics", "axis", "boxplot", "par", "plot", "points",
             "polygon", "rect", "segments", "text")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geoSpectral’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/maps/libs/maps.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/maps/libs/maps.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geosphere’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: FD
Loading required package: ade4
Error: package or namespace load failed for ‘ade4’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘ade4’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: gstat
Error: package or namespace load failed for ‘gstat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘gstat’ could not be loaded
Execution halted
Found the following calls to data() loading into the global environment:
File ‘geotools/R/zzz.R’:
  data(fr_geo_rad)
See section ‘Good practice’ in ‘?data’.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geozoning’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘geozoo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Running examples in ‘gepaf-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: decodePolyline
> ### Title: Decode a Google Polyline to a Data Frame
> ### Aliases: decodePolyline
> 
> ### ** Examples
> 
> coords <- decodePolyline(enc_polyline = "_p~iF~ps|U_ulLnnqC_mqNvxq`@")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Calls: decodePolyline ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GERGM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GerminaR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘germinationmetrics’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gesis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gestalt’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘getCRUCLdata’:
 .onLoad failed in loadNamespace() for ‘getCRUCLdata’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rappdirs/libs/rappdirs.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rappdirs/libs/rappdirs.so: failed to map segment from shared object
Execution halted
Running examples in ‘GetDFPData-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: gdfpd.convert.to.wide
> ### Title: Converts a dataframe from gdfpd_GetDFPData to the wide format
> ### Aliases: gdfpd.convert.to.wide
> 
> ### ** Examples
> 
> 
> # get example data from RData file
> my.f <- system.file('extdata/Example_DFP_Report_Petrobras.RData', package = 'GetDFPData')
> load(my.f)
> 
> df.assets <- df.reports$fr.assets[[1]]
> df.assets.wide <- gdfpd.convert.to.wide(df.assets)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: gdfpd.convert.to.wide ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘gdfpd-vignette-introduction.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘GetHFData-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ghfd_get_available_tickers_from_file
> ### Title: Function to get available tickers from downloaded zip file
> ### Aliases: ghfd_get_available_tickers_from_file
> 
> ### ** Examples
> 
> 
> ## get file from package (usually this would be been downloaded from the ftp)
> out.file <- system.file("extdata", 'NEG_OPCOES_20151126.zip', package = "GetHFData")
> 
> df.tickers <- ghfd_get_available_tickers_from_file(out.file)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: ghfd_get_available_tickers_from_file
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘ghfd-vignette-LOB.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘GetITRData-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: gitrd.convert.to.wide
> ### Title: Converts a dataframe from gitr_GetITRData to the wide format
> ### Aliases: gitrd.convert.to.wide
> 
> ### ** Examples
> 
> 
> # get example data from RData file
> my.f <- system.file('extdata/ExampleReport_Petrobras.RData', package = 'GetITRData')
> load(my.f)
> 
> df.assets <- df.reports$fr.assets[[1]]
> df.assets.wide <- gitrd.convert.to.wide(df.assets)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: gitrd.convert.to.wide ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘getlandsat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Running examples in ‘GetLattesData-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: gld_get_SJR
> ### Title: Reads SJR table
> ### Aliases: gld_get_SJR
> 
> ### ** Examples
> 
> df.SJR <- gld_get_SJR()
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: gld_get_SJR ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘gld_vignette-ReadLattes.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘getMet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/topmodel/libs/topmodel.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/topmodel/libs/topmodel.so: failed to map segment from shared object
Execution halted
Running examples in ‘getmstatistic-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: getmstatistic
> ### Title: Quantifying Systematic Heterogeneity in Meta-Analysis.
> ### Aliases: Rgetmstatistic getm getmstat getmstatistic
> ###   getmstatistic.default
> 
> ### ** Examples
> 
> library(getmstatistic)
> library(gridExtra)
> 
> 
> # Basic M analysis using the heartgenes214 dataset.
> # heartgenes214 is a multi-ethnic GWAS meta-analysis dataset for coronary artery disease.
> # To learn more about the heartgenes214 dataset ?heartgenes214
> 
> # Running an M analysis on 20 GWAS significant variants (p < 5e-08) in the first 10 studies
> 
> heartgenes44_10studies <- subset(heartgenes214, studies <= 10 & fdr214_gwas46 == 2) 
> heartgenes20_10studies <- subset(heartgenes44_10studies, 
+     variants %in% unique(heartgenes44_10studies$variants)[1:20])
> 
> getmstatistic_results <- getmstatistic(heartgenes20_10studies$beta_flipped, 
+                                         heartgenes20_10studies$gcse, 
+                                         heartgenes20_10studies$variants, 
+                                         heartgenes20_10studies$studies)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: getmstatistic ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Running ‘testthat.R’ [0s/0s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > ### to also run skip_on_cran() tests, uncomment:
  > Sys.setenv(NOT_CRAN="true")
  > 
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘getmstatistic-tutorial.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GetoptLong’:
 .onLoad failed in loadNamespace() for ‘rjson’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rjson/libs/rjson.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rjson/libs/rjson.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘getPass’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/getPass/libs/getPass.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/getPass/libs/getPass.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘getProxy’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: party
Loading required package: grid
Loading required package: mvtnorm
Error: package or namespace load failed for ‘mvtnorm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Error: package ‘mvtnorm’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘getTBinR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘GetTDData-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: get.yield.curve
> ### Title: Gets the current yield curve
> ### Aliases: get.yield.curve
> 
> ### ** Examples
> 
> df.yield <- get.yield.curve()
Error: .onLoad failed in loadNamespace() for 'XML', details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘gtdd-vignette_GetTDData.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gettz’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gettz/libs/gettz.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gettz/libs/gettz.so: failed to map segment from shared object
Execution halted
Malformed Title field: should not end in a period.
Malformed Description field: should contain one or more complete sentences.
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RGtk2/libs/RGtk2.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RGtk2/libs/RGtk2.so: failed to map segment from shared object
Running examples in ‘GFD-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: GFD
> ### Title: Tests for General Factorial Designs
> ### Aliases: GFD
> 
> ### ** Examples
> 
> GFD(weightgain ~ source * type, data = HSAUR::weightgain, nperm = 1000)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: GFD ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GFE’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gfer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/colorspace/libs/colorspace.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/colorspace/libs/colorspace.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: parallel
Loading required package: nnet
Error: package or namespace load failed for ‘nnet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nnet/libs/nnet.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nnet/libs/nnet.so: failed to map segment from shared object
Error: package ‘nnet’ could not be loaded
Execution halted
Found the following significant warnings:
  FORCE_certify.c:116:15: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/GFORCE.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GFORCE’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/GFORCE/libs/GFORCE.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/GFORCE/libs/GFORCE.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggChernoff’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggconf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggdendro’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggdistribute’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggdmc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GGEBiplots’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggeffects’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Running examples in ‘ggenealogy-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: buildAncDesTotalDF
> ### Title: Returns data frame with plot coordinates of all ancestors and
> ###   descendants of a variety.
> ### Aliases: buildAncDesTotalDF
> 
> ### ** Examples
> 
> data(sbGeneal)
> v1 <- "Essex"
> buildAncDesTotalDF(v1, sbGeneal)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: buildAncDesTotalDF ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
dfToIG               package:ggenealogy                R Documentation

_P_r_o_c_e_s_s _t_h_e _g_e_n_e_a_l_o_g_y _g_r_a_p_h

_D_e_s_c_r_i_p_t_i_o_n:

     Processes the genealogy into an igraph object with appropriate
     vertex information, graph type, and edge weights.

_U_s_a_g_e:

     dfToIG(geneal, vertexinfo = NULL, edgeweights = 1, isDirected = FALSE)
     
_A_r_g_u_m_e_n_t_s:

  geneal: the full genealogy (in data frame format)

vertexinfo: (default NULL) either names of columns in the genealogy
          which should be added to the database as vertex information
          or a data frame with information for all vertices such that
          the first column contains vertex names.

edgeweights: (default 1) name of a column which contains edge weights

isDirected: (default FALSE) should the graph be a directed graph?

_S_e_e _A_l_s_o:

     <URL: https://www.r-project.org> for iGraph information



Error: processing vignette ‘ggenealogy.Rnw’ failed with diagnostics:
 chunk 9 
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gge’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggExtra’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
See chapter ‘System and foreign language interfaces’ in the ‘Writing R
Extensions’ manual.
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Running examples in ‘ggfan-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: calc_quantiles
> ### Title: Calculate quantiles of a tidy dataframe
> ### Aliases: calc_quantiles
> 
> ### ** Examples
> 
> 
> head(fake_df)
  x Sim           y
1 1  X1  1.05953360
2 2  X1 -1.00586200
3 3  X1 -0.02297916
4 4  X1  1.09988604
5 5  X1  2.15035110
6 6  X1  1.51674379
> 
> fake_q <- calc_quantiles(fake_df, intervals=c(0,0.5,0.8))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: calc_quantiles ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘geom_fan.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘ggfittext-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: geom_fit_text
> ### Title: A 'ggplot2' geom to fit text inside a box
> ### Aliases: geom_fit_text
> 
> ### ** Examples
> 
> 
> ggplot2::ggplot(ggplot2::presidential, ggplot2::aes(ymin = start, ymax = end,
+     label = name, fill = party, xmin = 0, xmax = 1)) +
+   ggplot2::geom_rect(colour = 'black') +
+   geom_fit_text(grow = TRUE)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: :: ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘introduction-to-ggfittext.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggfocus’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
See chapter ‘System and foreign language interfaces’ in the ‘Writing R
Extensions’ manual.
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Running examples in ‘gggenes-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: geom_gene_arrow
> ### Title: A 'ggplot2' geom to draw genes as arrows
> ### Aliases: geom_gene_arrow
> 
> ### ** Examples
> 
> 
> ggplot2::ggplot(example_genes, ggplot2::aes(xmin = start, xmax = end,
+                                             y = molecule, fill = gene)) +
+ geom_gene_arrow() +
+ ggplot2::facet_wrap(~ molecule, scales = "free")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: :: ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘introduction-to-gggenes.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘ggguitar-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: select_chords
> ### Title: Select chords by criteria
> ### Aliases: select_chords
> 
> ### ** Examples
> 
> select_chords(chord_name = 'Major', string_5_fret = 3)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: select_chords ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Running ‘test_tablature.R’ [0s/0s]
  Running ‘testthat.R’ [0s/0s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gghalfnorm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gginference’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggiraphExtra’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggiraph’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GGIR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: ggridges
Error: package or namespace load failed for ‘ggridges’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘ggridges’ could not be loaded
Execution halted
Found the following significant warnings:
  Warning: ‘__var_41_mma.offset’ is used uninitialized in this function [-Wuninitialized]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/gglasso.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gglasso’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gglasso/libs/gglasso.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gglasso/libs/gglasso.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gglogo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘ggloop-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ggloop
> ### Title: Create ggplot plots in a loop.
> ### Aliases: ggloop
> 
> ### ** Examples
> 
> # 1. Return all possible x-y combinations.
> plots <- ggloop(data = mtcars,
+                 mappings = aes_loop(x = mpg:carb, y = mpg:carb))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lazyeval/libs/lazyeval.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lazyeval/libs/lazyeval.so: failed to map segment from shared object
Calls: ggloop ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘intro.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GGMM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggmuller’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘ggnormalviolin-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: geom_normalviolin
> ### Title: Creates normal violins with specified means and standard
> ###   deviations
> ### Aliases: geom_normalviolin
> 
> ### ** Examples
> 
> library(ggplot2)
Error: package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘ggpage-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: break_help
> ### Title: Repeating of indexes
> ### Aliases: break_help
> 
> ### ** Examples
> 
> break_help(c(1, 2, 3))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: break_help ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘different-features.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggparliament’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggperiodic’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggplotAssist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggplotgui’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggplotify’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggpval’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
See chapter ‘System and foreign language interfaces’ in the ‘Writing R
Extensions’ manual.
Error in re-building vignettes:
  ...
Error: processing vignette ‘XbarR_HOTTO.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘ggplot2’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
See chapter ‘System and foreign language interfaces’ in the ‘Writing R
Extensions’ manual.
Running examples in ‘ggQQunif-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: geom_QQ_unif
> ### Title: geom_QQ_unif
> ### Aliases: geom_QQ_unif
> 
> ### ** Examples
> 
> library(ggplot2)
Error: package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggquickeda’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: randomForestSRC
Error: package or namespace load failed for ‘randomForestSRC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForestSRC/libs/randomForestSRC.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForestSRC/libs/randomForestSRC.so: failed to map segment from shared object
Error: package ‘randomForestSRC’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggrasp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggridges’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Malformed Description field: should contain one or more complete sentences.
Package listed in more than one of Depends, Imports, Suggests, Enhances:
  ‘ggplot2’
A package should be listed in only one of these fields.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggsci’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggseqlogo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggsolvencyii’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggsom’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggspectra’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggstance’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggstatsplot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggThemeAssist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggthemes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GGUM’:
 .onLoad failed in loadNamespace() for ‘mnormt’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ggvis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘ghibli-guide.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Namespace with empty importFrom: ‘statmod’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gh’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: numDeriv
Loading required package: gplots
Error: package or namespace load failed for ‘gplots’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Error: package ‘gplots’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gibble’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
NB: .First.lib is obsolete and will not be used in R >= 3.0.0
File ‘gibbs.met/R/firstlib.R’:
  .First.lib calls:
    cat("Naive Gibbs Sampling with Metropolis steps(gibbs.met) loaded\n",     "COPYRIGHT 2008 (c) Longhai Li (http://math.usask.ca/~longhai)\n",     "Type ?begin.gibbs.met for help to this package\n", sep = "")

Package startup functions should use ‘packageStartupMessage’ to
  generate messages.
See section ‘Good practice’ in '?.onAttach'.

met_gaussian : one_transition: no visible global function definition
  for ‘rnorm’
met_gaussian : one_transition: no visible global function definition
  for ‘runif’
Undefined global functions or variables:
  rnorm runif
Consider adding
  importFrom("stats", "rnorm", "runif")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Gifi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/colorspace/libs/colorspace.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/colorspace/libs/colorspace.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gifski’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gifski/libs/gifski.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gifski/libs/gifski.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gifti’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GIGrvg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/GIGrvg/libs/GIGrvg.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/GIGrvg/libs/GIGrvg.so: failed to map segment from shared object
Execution halted
ssa.btl: no visible global function definition for ‘rbinom’
ssa.btl: no visible global function definition for ‘rpois’
ssa.btl.diag: no visible global function definition for ‘rbinom’
ssa.btl.diag: no visible global function definition for ‘rpois’
ssa.d: no visible global function definition for ‘runif’
ssa.d.diag: no visible global function definition for ‘runif’
ssa.etl: no visible global function definition for ‘rpois’
ssa.etl.diag: no visible global function definition for ‘rpois’
ssa.otl: no visible global function definition for ‘runif’
ssa.otl: no visible global function definition for ‘rpois’
ssa.otl.diag: no visible global function definition for ‘runif’
ssa.otl.diag: no visible global function definition for ‘rpois’
ssa.plot: no visible global function definition for ‘rainbow’
ssa.plot: no visible global function definition for ‘matplot’
ssa.plot: no visible global function definition for ‘title’
ssa.plot: no visible global function definition for ‘legend’
ssa.plot: no visible global function definition for ‘mtext’
ssa.run: no visible global function definition for ‘flush.console’
ssa.terminate: no visible global function definition for ‘sd’
Undefined global functions or variables:
  flush.console legend matplot mtext rainbow rbinom rpois runif sd
  title
Consider adding
  importFrom("grDevices", "rainbow")
  importFrom("graphics", "legend", "matplot", "mtext", "title")
  importFrom("stats", "rbinom", "rpois", "runif", "sd")
  importFrom("utils", "flush.console")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gimme’:
 .onLoad failed in loadNamespace() for ‘mnormt’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gimmeTools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: EBImage
Error: package or namespace load failed for ‘EBImage’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘EBImage’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘giphyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GiRaF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gistr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘git2r’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/git2r/libs/git2r.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/git2r/libs/git2r.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gitgadget’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘githubinstall’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: magrittr
Error: package or namespace load failed for ‘gitlabr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gitter’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘givitiR.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Package listed in more than one of Depends, Imports, Suggests, Enhances:
  ‘lattice’
A package should be listed in only one of these fields.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gjam’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gkmSVM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘gk-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: fdsa
> ### Title: Finite difference stochastic approximation inference
> ### Aliases: fdsa
> 
> ### ** Examples
> 
> set.seed(1)
> x = rgk(10, A=3, B=1, g=2, k=0.5) ##An unusually small dataset for fast execution of this example
> out = fdsa(x, N=100, theta0=c(mean(x),sd(x),0,0), theta_min=c(-5,1E-5,-5,0), theta_max=c(5,5,5,5))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: fdsa ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘glamlasso’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘glarma’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Running examples in ‘glassdoor-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: get_ip
> ### Title: Get IP Address
> ### Aliases: get_ip
> 
> ### ** Examples
> 
> get_ip()
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Calls: get_ip ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘running-glassdoor.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘glassoFast’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/glassoFast/libs/glassoFast.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/glassoFast/libs/glassoFast.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘glasso’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/glasso/libs/glasso.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/glasso/libs/glasso.so: failed to map segment from shared object
Execution halted
fptcdf: no visible global function definition for ‘dnorm’
fptcdf: no visible global function definition for ‘pnorm’
fptpdf: no visible global function definition for ‘pnorm’
fptpdf: no visible global function definition for ‘dnorm’
lba: no visible global function definition for ‘as.formula’
lba: no visible global function definition for ‘model.frame’
lba : logl: no visible global function definition for ‘head’
lba: no visible global function definition for ‘optim’
pmod: no visible global function definition for ‘model.frame’
pmod: no visible global function definition for ‘model.matrix’
rlba: no visible global function definition for ‘pnorm’
rlba: no visible global function definition for ‘rnorm’
rlba: no visible global function definition for ‘runif’
tablba: no visible global function definition for ‘pnorm’
Undefined global functions or variables:
  as.formula dnorm head model.frame model.matrix optim pnorm rnorm
  runif
Consider adding
  importFrom("stats", "as.formula", "dnorm", "model.frame",
             "model.matrix", "optim", "pnorm", "rnorm", "runif")
  importFrom("utils", "head")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘glcm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gld’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lmom/libs/lmom.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lmom/libs/lmom.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: GLDEX
Loading required package: cluster
Error: package or namespace load failed for ‘cluster’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so: failed to map segment from shared object
Error: package ‘cluster’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GLIDE’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘glinternet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/glinternet/libs/glinternet.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/glinternet/libs/glinternet.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gllm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gllm/libs/gllm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gllm/libs/gllm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: TMB
Error: package or namespace load failed for ‘TMB’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘TMB’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘glmbb’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘glmBfp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘glmc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘glm.deploy’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘glmlep’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/glmlep/libs/glmlep.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/glmlep/libs/glmlep.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GLMMadaptive’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘quick_use.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘glmmBUGS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘glmmEP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘glmmLasso’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘glmmML’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/glmmML/libs/glmmML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/glmmML/libs/glmmML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: trust
Loading required package: mvtnorm
Error: package or namespace load failed for ‘mvtnorm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Error: package ‘mvtnorm’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘glmmsr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  glmmTMB.cpp:845:10: warning: explicitly assigning value of variable of type 'vector<Type>' to itself [-Wself-assign-overloaded]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/glmmTMB.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘glmmTMB’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘glmnetUtils’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: glmpath
Loading required package: survival
Error: package or namespace load failed for ‘survival’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘survival’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘glmx’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
.nPerms: no visible global function definition for ‘terms’
expr.dev.test: no visible global function definition for ‘terms’
expr.dev.test: no visible global function definition for ‘model.matrix’
expr.dev.test: no visible global function definition for ‘pchisq’
lancaster: no visible global function definition for ‘pgamma’
liptak: no visible global function definition for ‘pnorm’
summary.dev.test : ci: no visible global function definition for
  ‘qnorm’
varwiselogLik : <anonymous>: no visible global function definition for
  ‘deviance’
varwiselogLik.regression: no visible global function definition for
  ‘glm.fit’
Undefined global functions or variables:
  deviance glm.fit model.matrix pchisq pgamma pnorm qnorm terms
Consider adding
  importFrom("stats", "deviance", "glm.fit", "model.matrix", "pchisq",
             "pgamma", "pnorm", "qnorm", "terms")
to your NAMESPACE file.
CreateFormula: no visible global function definition for ‘as.formula’
GeneratePvalues: no visible binding for global variable ‘binomial’
globalARTP: no visible binding for global variable ‘binomial’
globalFisher: no visible binding for global variable ‘binomial’
globalFisher: no visible global function definition for ‘pchisq’
globalSimes: no visible binding for global variable ‘binomial’
pvalFmla: no visible binding for global variable ‘binomial’
pvalFmla: no visible global function definition for ‘glm’
pvalFmla: no visible global function definition for ‘anova’
runPermut: no visible binding for global variable ‘binomial’
runPvalues: no visible binding for global variable ‘binomial’
Undefined global functions or variables:
  anova as.formula binomial glm pchisq
Consider adding
  importFrom("stats", "anova", "as.formula", "binomial", "glm", "pchisq")
to your NAMESPACE file.
Error in re-building vignettes:
  ...
Error: processing vignette ‘GlobalOptions.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘globalOptTests’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/globalOptTests/libs/globalOptTests.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/globalOptTests/libs/globalOptTests.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘glpkAPI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/glpkAPI/libs/glpkAPI.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/glpkAPI/libs/glpkAPI.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GLSE’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘glue’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/glue/libs/glue.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/glue/libs/glue.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘glycanr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gmailr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gmapsdistance’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gmat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gmat/libs/gmat.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gmat/libs/gmat.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GMCM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gMCP’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: DBI
Loading required package: RMySQL
Error: package or namespace load failed for ‘RMySQL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RMySQL/libs/RMySQL.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RMySQL/libs/RMySQL.so: failed to map segment from shared object
Error: package ‘RMySQL’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GMDH2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GMDH’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Gmedian’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gmediation’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘kmeans_vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GMMBoost’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gmodels’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gmp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gmp/libs/gmp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gmp/libs/gmp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GMSE’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘gmvarkit-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: GMVAR
> ### Title: Create object of class 'gmvar' defining a GMVAR model
> ### Aliases: GMVAR logLik.gmvar residuals.gmvar summary.gmvar plot.gmvar
> ###   print.gmvar
> 
> ### ** Examples
> 
> # These examples use the data 'eurusd' which comes with the
> # package, but in a scaled form.
> data <- cbind(10*eurusd[,1], 100*eurusd[,2])
> colnames(data) <- colnames(eurusd)
> 
> # GMVAR(1,2), d=2 model:
> params122 <- c(0.623, -0.129, 0.959, 0.089, -0.006, 1.006, 1.746,
+  0.804, 5.804, 3.245, 7.913, 0.952, -0.037, -0.019, 0.943, 6.926,
+  3.982, 12.135, 0.789)
> mod122 <- GMVAR(data, p=1, M=2, params=params122)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: GMVAR ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘intro-to-gmvarkit.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: alabama
Loading required package: numDeriv
Loading required package: nleqslv
Error: package or namespace load failed for ‘nleqslv’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nleqslv/libs/nleqslv.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nleqslv/libs/nleqslv.so: failed to map segment from shared object
Error: package ‘nleqslv’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gnFit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  Evaluation.cpp:173:9: warning: reference cannot be bound to dereferenced null pointer in well-defined C++ code; comparison may be assumed to always evaluate to true [-Wtautological-undefined-compare]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/gnmf.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gnmf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gnmf/libs/gnmf.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gnmf/libs/gnmf.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gnm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nnet/libs/nnet.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nnet/libs/nnet.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘gnormUse.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘goeveg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gofastr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GofKmt’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/truncnorm/libs/truncnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/truncnorm/libs/truncnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gof’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gof/libs/gof.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gof/libs/gof.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘goftest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/goftest/libs/goftest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/goftest/libs/goftest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: fitdistrplus
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Packages listed in more than one of Depends, Imports, Suggests, Enhances:
  ‘GANPA’ ‘WGCNA’
A package should be listed in only one of these fields.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: GANPA
Loading required package: GANPAdata
Loading required package: WGCNA
Loading required package: dynamicTreeCut
Loading required package: fastcluster
Error: package or namespace load failed for ‘fastcluster’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fastcluster/libs/fastcluster.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fastcluster/libs/fastcluster.so: failed to map segment from shared object
Error: package ‘fastcluster’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: fGarch
Loading required package: timeDate
Loading required package: timeSeries
Loading required package: fBasics
Error: package or namespace load failed for ‘fBasics’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatial/libs/spatial.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatial/libs/spatial.so: failed to map segment from shared object
Error: package ‘fBasics’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘goldi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SnowballC/libs/SnowballC.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SnowballC/libs/SnowballC.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘GoodmanKruskal.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘goodpractice’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/covr/libs/covr.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/covr/libs/covr.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘googleAnalyticsR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘googleAuthR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘googleCloudStorageR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘googleComputeEngineR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘googledrive’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/glue/libs/glue.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/glue/libs/glue.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘googleLanguageR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘googlenlp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘googlePolylines’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘googlePrintr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘googlePublicData’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘googlesheets’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘googleVis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘googleway’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gower’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gower/libs/gower.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gower/libs/gower.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gpairs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Random.Start: no visible global function definition for ‘rnorm’
Undefined global functions or variables:
  rnorm
Consider adding
  importFrom("stats", "rnorm")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GPB’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/GPB/libs/GPB.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/GPB/libs/GPB.so: failed to map segment from shared object
Execution halted
CumulativeVarPlot: no visible global function definition for ‘plot’
CumulativeVarPlot: no visible global function definition for ‘axis’
PCplot: no visible global function definition for ‘par’
PCplot: no visible global function definition for ‘plot’
PCplot: no visible global function definition for ‘rainbow’
PCplot: no visible global function definition for ‘density’
gDist: no visible global function definition for ‘plot’
gDist: no visible global function definition for ‘density’
gDist: no visible global function definition for ‘abline’
gPCA.batchdetect: no visible global function definition for ‘var’
Undefined global functions or variables:
  abline axis density par plot rainbow var
Consider adding
  importFrom("grDevices", "rainbow")
  importFrom("graphics", "abline", "axis", "par", "plot")
  importFrom("stats", "density", "var")
to your NAMESPACE file.
The following files are already in R: ‘Sweave.sty’
Please remove them from your package.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gpclib’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpclib/libs/gpclib.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpclib/libs/gpclib.so: failed to map segment from shared object
Execution halted
Namespaces with empty importFrom:
  ‘scatterplot3d’ ‘sqldf’
Loading this package had a fatal error status code 1
Loading log:
Loading required package: scatterplot3d
Loading required package: sqldf
Loading required package: gsubfn
Loading required package: proto
Loading required package: RSQLite
Error: package or namespace load failed for ‘RSQLite’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘RSQLite’ could not be loaded
Execution halted
.r1: no visible global function definition for ‘cor’
.r2: no visible global function definition for ‘cor’
rgp: no visible global function definition for ‘runif’
rgp: no visible global function definition for ‘rexp’
Undefined global functions or variables:
  cor rexp runif
Consider adding
  importFrom("stats", "cor", "rexp", "runif")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: fda.usc
Loading required package: fda
Loading required package: splines
Loading required package: Matrix
Error: package or namespace load failed for ‘Matrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘Matrix’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GPfit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lhs/libs/lhs.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lhs/libs/lhs.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GPGame’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/DiceDesign/libs/DiceDesign.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/DiceDesign/libs/DiceDesign.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GpGp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gpg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpg/libs/gpg.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpg/libs/gpg.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gplots’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Malformed Description field: should contain one or more complete sentences.
Checking should be performed on sources prepared by ‘R CMD build’.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: isotone
Error: package or namespace load failed for ‘isotone’:
 .onLoad failed in loadNamespace() for ‘nnls’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nnls/libs/nnls.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nnls/libs/nnls.so: failed to map segment from shared object
Error: package ‘isotone’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GPM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GPrank’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gpuR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gqlr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gquad’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gradientPickerD3’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: gRbase
Error: package or namespace load failed for ‘gRbase’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘gRbase’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RGtk2/libs/RGtk2.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RGtk2/libs/RGtk2.so: failed to map segment from shared object
Error: package or namespace load failed for ‘GrammR’:
 .onLoad failed in loadNamespace() for ‘RGtk2’, details:
  call: install_all()
  error: This platform is not yet supported by the automatic installer. Please install GTK+ manually, if necessary. See: http://www.gtk.org
In addition: Warning message:
Failed to load RGtk2 dynamic library, attempting to install it. 
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: GRANCore
Loading required package: switchr
Warning: namespace ‘RCurl’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘RCurl’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘RCurl’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘RCurl’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘RCurl’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘RCurl’ is not available and has been replaced
by .GlobalEnv when processing object ‘’

Attaching package: ‘GRANCore’

The following object is masked from ‘package:utils’:

    available.packages

Error: package or namespace load failed for ‘GRANBase’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘grapes.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘grapherator’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GraphFactor’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘graphframes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘graphicalVAR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘graphicsQC’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘graphon’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GraphPCA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘graphql’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: snowfall
Loading required package: snow
Error: package or namespace load failed for ‘graphscan’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘graphTweets’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Packages suggested but not available for checking:
  'taxstats', 'taxstats1516'
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘grattan’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gravity’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gRbase’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: imagine
Error: package or namespace load failed for ‘imagine’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘imagine’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GreedyEPL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GreedySBTM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gren’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GREP2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Biobase/libs/Biobase.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Biobase/libs/Biobase.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘greta’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘grex.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘greybox’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: stats4
Loading required package: survival
Error: package or namespace load failed for ‘survival’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘survival’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘grf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...

Error: processing vignette ‘gridBase.Rnw’ failed with diagnostics:
 chunk 13 
Error : package or namespace load failed for ‘lattice’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gridDebug’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/graph/libs/BioC_graph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/graph/libs/BioC_graph.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘arrangeGrob.rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: grid
Loading required package: graph
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: ‘BiocGenerics’

The following objects are masked from ‘package:parallel’:

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from ‘package:stats’:

    IQR, mad, sd, var, xtabs

The following objects are masked from ‘package:base’:

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, basename, cbind, colMeans, colSums, colnames,
    dirname, do.call, duplicated, eval, evalq, get, grep, grepl,
    intersect, is.unsorted, lapply, mapply, match, mget, order, paste,
    pmax, pmax.int, pmin, pmin.int, rank, rbind, rowMeans, rowSums,
    rownames, sapply, setdiff, sort, table, tapply, union, unique,
    unsplit, which, which.max, which.min

Error: package or namespace load failed for ‘graph’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/graph/libs/BioC_graph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/graph/libs/BioC_graph.so: failed to map segment from shared object
Error: package ‘graph’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gridsample’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gridsampler’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gridSVG’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Non-standard file/directory found at top level:
  ‘R.css’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘grImport2’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: grid
Loading required package: XML
Error: package or namespace load failed for ‘XML’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Error: package ‘XML’ could not be loaded
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘GROAN.vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gromovlab’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/glpkAPI/libs/glpkAPI.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/glpkAPI/libs/glpkAPI.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘groupdata2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘groupedstats’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘groupedSurv’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘groupICA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘groupRemMap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/groupRemMap/libs/groupRemMap.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/groupRemMap/libs/groupRemMap.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘groupsubsetselection’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/groupsubsetselection/libs/groupsubsetselection.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/groupsubsetselection/libs/groupsubsetselection.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘grove’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘Growthcurver-vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘grpreg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘grpSLOPE’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘grpss’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Running examples in ‘GrpString-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: CommonPattern
> ### Title: Discovers common patterns in a group of strings - full version
> ### Aliases: CommonPattern
> ### Keywords: programming
> 
> ### ** Examples
> 
> # simple strings
> strs.vec <- c("ABCDdefABCDa", "def123DC", "123aABCD", "ACD13", "AC1ABC", "3123fe")
> CommonPattern(strs.vec, low = 30, high = 50, interval = 20)
      Files with different percentages of common patterns are exported.
      Patterns occur at least twice are exported in a separate file.
[1] "Number of original strings: 6; Total number of substrings (patterns): 113."
> 
> # None-default cutoff values, with conversion back
> data(eventChar.df)
> data(str1)
> s0 <- str1[5:15]
> CommonPattern(s0, low = 20, high = 30, interval = 10, eveChar.df = eventChar.df)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: CommonPattern ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘grr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/grr/libs/grr.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/grr/libs/grr.so: failed to map segment from shared object
Execution halted
Running examples in ‘GRTo-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: bvmed
> ### Title: Repeated medians regression for the determination of the
> ###   Gutenberg-Richter b-value
> ### Aliases: bvmed
> ### Keywords: robust
> 
> ### ** Examples
> 
> bvmed(file=system.file("extdata","IDYLLdeep.data.txt",package="GRTo"), colid = 15, nrep = 150, 
+ tm = NULL, findtm = TRUE, title = "IDYLLWILD")

The R bootstrap package is necessary

...You just have to wait...
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bootstrap/libs/bootstrap.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bootstrap/libs/bootstrap.so: failed to map segment from shared object
Calls: bvmed ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
.gsa.assignGATKTableToEnvironment: no visible global function
  definition for ‘type.convert’
Undefined global functions or variables:
  type.convert
Consider adding
  importFrom("utils", "type.convert")
to your NAMESPACE file.
'library' or 'require' call to ‘impute’ in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Found the following apparent S3 methods exported but not registered:
  print.GSA print.GSA.func summary.GSA.genesets
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
GSA: no visible global function definition for ‘impute.knn’
GSA.correlate: no visible global function definition for ‘quantile’
GSA.func: no visible global function definition for ‘quantile’
GSA.func: no visible global function definition for ‘var’
GSA.func: no visible global function definition for ‘qnorm’
GSA.func: no visible global function definition for ‘pt’
GSA.plot: no visible global function definition for ‘plot’
GSA.plot: no visible global function definition for ‘points’
GSA.plot: no visible global function definition for ‘legend’
GSA.xl.correlate: no visible global function definition for ‘quantile’
GSA.xl.plot: no visible global function definition for ‘runif’
GSA.xl.summary.genesets: no visible global function definition for
  ‘quantile’
est.s0: no visible global function definition for ‘quantile’
est.s0: no visible global function definition for ‘mad’
est.s0: no visible global function definition for ‘var’
paired.perm: no visible global function definition for ‘runif’
paired.ttest.func: no visible global function definition for ‘var’
tCorr.func: no visible global function definition for ‘cor’
taCorr.func: no visible global function definition for ‘cor’
Undefined global functions or variables:
  cor impute.knn legend mad plot points pt qnorm quantile runif var
Consider adding
  importFrom("graphics", "legend", "plot", "points")
  importFrom("stats", "cor", "mad", "pt", "qnorm", "quantile", "runif",
             "var")
to your NAMESPACE file.
Rd file 'GSA.Rd':
  \usage lines wider than 90 characters:
     method=c("maxmean","mean","absmean"), resp.type=c("Quantitative","Two class unpaired","Survival","Multiclass", "Two class paired", "tCo ... [TRUNCATED]
  \examples lines wider than 100 characters:
     GSA.obj<-GSA(x,y, genenames=genenames, genesets=genesets,  resp.type="Two class unpaired", nperms=100)
     #   GSA.obj<-GSA(x,y, genenames=genenames, genesets=geneset.obj$genesets,  resp.type="Two class unpaired", nperms=100)

Rd file 'GSA.func.Rd':
  \usage lines wider than 90 characters:
     s0 = NULL, s0.perc = NULL, minsize = 15, maxsize= 500, restand = TRUE, restand.basis=c("catalog","data")) 
  \examples lines wider than 100 characters:
     #   GSA.func.obj<-GSA.func(x,y, genenames=genenames, genesets=geneset.obj$genesets,  resp.type="Two class unpaired")

Rd file 'GSA.genescores.Rd':
  \examples lines wider than 100 characters:
     GSA.obj<-GSA(x,y, genenames=genenames, genesets=genesets,  resp.type="Two class unpaired", nperms=100)

Rd file 'GSA.listsets.Rd':
  \examples lines wider than 100 characters:
     GSA.obj<-GSA(x,y, genenames=genenames, genesets=genesets,  resp.type="Two class unpaired", nperms=100)

Rd file 'GSA.plot.Rd':
  \examples lines wider than 100 characters:
     GSA.obj<-GSA(x,y, genenames=genenames, genesets=genesets,  resp.type="Two class unpaired", nperms=100)

These lines will be truncated in the PDF manual.
S3 methods shown with full name in documentation object 'GSA-internal':
  ‘print.GSA.func’ ‘print.GSA’ ‘summary.GSA.genesets’

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gsarima’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gscounts’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: xtable
Loading required package: ggplot2
Error: package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘ggplot2’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gsEasy’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: memoise
Error: package or namespace load failed for ‘memoise’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Error: package ‘memoise’ could not be loaded
Execution halted
Running examples in ‘gSeg-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: gSeg
> ### Title: Graph-Based Change-Point Detection
> ### Aliases: gSeg
> 
> ### ** Examples
> 
> 
> data(Example)
> # Five examples, each example is a n-length sequence.
> # Ei (i=1,...,5): an edge matrix representing a similarity graph constructed on the
> # observations in the ith sequence.  
> # The following code shows how the Ei's were constructed.
> 
> require(ade4) 
Loading required package: ade4
Error: package or namespace load failed for ‘ade4’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
> # For illustration, we use 'mstree' in this package to construct the similarity graph.
> # You can use other ways to construct the graph.
> 
> ## Sequence 1: change in mean in the middle of the sequence.
> d = 50
> mu = 2
> tau = 100
> n = 200
> set.seed(500)
> y = rbind(matrix(rnorm(d*tau),tau), matrix(rnorm(d*(n-tau),mu/sqrt(d)), n-tau))
> y.dist = dist(y)
> E1 = mstree(y.dist)
Error in mstree(y.dist) : could not find function "mstree"
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gSEM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gsg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘gsheet-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: gsheet2tbl
> ### Title: Download Google sheet as a table
> ### Aliases: gsheet2tbl
> 
> ### ** Examples
> 
> 
> # Download a sheet
> url <- 'docs.google.com/spreadsheets/d/1I9mJsS5QnXF2TNNntTy-HrcdHmIF9wJ8ONYvEJTXSNo'
> a <- gsheet2tbl(url)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: gsheet2tbl ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GSIF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Namespaces with empty importFrom:
  ‘gee’ ‘geepack’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gsl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gsl/libs/gsl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gsl/libs/gsl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gsmoothr’:
 .onLoad failed in loadNamespace() for ‘gsmoothr’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gsmoothr/libs/gsmoothr.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gsmoothr/libs/gsmoothr.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GSMX’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GSODR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GSparO’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gsrsb’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: gss
Error: package or namespace load failed for ‘gss’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gss/libs/gss.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gss/libs/gss.so: failed to map segment from shared object
Error: package ‘gss’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GSSE’:
 .onLoad failed in loadNamespace() for ‘Iso’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Iso/libs/Iso.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Iso/libs/Iso.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gss’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gss/libs/gss.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gss/libs/gss.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gstat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘gsubfn-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: list
> ### Title: Multiple value assignment.
> ### Aliases: list [<-.result
> ### Keywords: misc
> 
> ### ** Examples
> 
> # swap a and b without explicitly creating a temporary
> a <- 1; b <- 2
> list[a,b] <- list(b,a)
> 
> # get eigenvectors and eigenvalues
> list[eval, evec] <- eigen(cbind(1,1:3,3:1))
> 
> # get today's month, day, year
> require(chron)
Loading required package: chron
Error: package or namespace load failed for ‘chron’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/chron/libs/chron.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/chron/libs/chron.so: failed to map segment from shared object
> list[Month, Day, Year] <- month.day.year(unclass(Sys.Date()))
Error in month.day.year(unclass(Sys.Date())) : 
  could not find function "month.day.year"
Execution halted
Error in re-building vignettes:
  ...
Loading required package: proto
Loading required package: SparseM
Error: package or namespace load failed for ‘SparseM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SparseM/libs/SparseM.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SparseM/libs/SparseM.so: failed to map segment from shared object

Error: processing vignette ‘gsubfn.Rnw’ failed with diagnostics:
 chunk 19 (label = gsubfn-fn-quantreg-load) 
Error : package ‘SparseM’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: testthat
Error: package or namespace load failed for ‘testthat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Error: package ‘testthat’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: truncnorm
Error: package or namespace load failed for ‘truncnorm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/truncnorm/libs/truncnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/truncnorm/libs/truncnorm.so: failed to map segment from shared object
Error: package ‘truncnorm’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gsynth’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘gt4ireval.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Rd file 'gtcorr.matrix.Rd':
  \usage lines wider than 90 characters:
     gtcorr.matrix(r, c, m = 1, p, sigma = 0, se = 1, sp = 1, r.prime, c.prime, arrangement = c("rectangular", "diagonal", "random"), model  ... [TRUNCATED]

Rd file 'gtcorr.matrix.user.Rd':
  \usage lines wider than 90 characters:
     gtcorr.matrix.user(clusters, p, sigma=0, se=1, sp=1, model = c("beta-binomial", "Madsen", "Morel-Neerchal"))

These lines will be truncated in the PDF manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gTests’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: hts
Loading required package: forecast
Error: package or namespace load failed for ‘forecast’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘forecast’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gtrendsR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GuardianR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Running examples in ‘Guerry-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: gfrance
> ### Title: Map of France in 1830 with the Guerry data
> ### Aliases: gfrance
> ### Keywords: datasets spatial
> 
> ### ** Examples
> 
> data(gfrance)
> names(gfrance)  ## list @data variables
Loading required package: sp
Error: package or namespace load failed for ‘sp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sp/libs/sp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sp/libs/sp.so: failed to map segment from shared object
Error in .requirePackage(package) : unable to find required package ‘sp’
Calls: names ... .extendsForS3 -> extends -> getClassDef -> .requirePackage
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘guess’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/truncnorm/libs/truncnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/truncnorm/libs/truncnorm.so: failed to map segment from shared object
Execution halted
Warning: namespace ‘Matrix’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘colorspace’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘Matrix’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘colorspace’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘Matrix’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘Matrix’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘colorspace’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘colorspace’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘Matrix’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘Matrix’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘Matrix’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘Matrix’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘Matrix’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘Matrix’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘Matrix’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘Matrix’ is not available and has been replaced
by .GlobalEnv when processing object ‘’

A namespace must be able to be loaded with just the base namespace
loaded: otherwise if the namespace gets loaded by a saved object, the
session will be unable to start.

Probably some imports need to be declared in the NAMESPACE file.
Running examples in ‘GUIgems-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: graphHf
> ### Title: graphHf
> ### Aliases: graphHf
> ### Keywords: graph, graphHF, paths progression
> 
> ### ** Examples
> 
> 
> hfNames <- array(rep("Exponential", 36), dim = c(6,6))
> hfNames[col(hfNames)<=row(hfNames)]<-"NULL"
> hfNames[3,4:5] <-  rep("impossible",2)
> graphHf(hfNames)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Calls: graphHf ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GUILDS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: Nozzle.R1
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gunsales’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gustave’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gutenbergr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘gvc.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gvcR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Found the following apparent S3 methods exported but not registered:
  plot.gvlma plot.gvlmaDel print.gvlma print.gvlmaDel summary.gvlma
  summary.gvlmaDel update.gvlma
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: geepack
Error: package or namespace load failed for ‘geepack’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geepack/libs/geepack.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geepack/libs/geepack.so: failed to map segment from shared object
Error: package ‘geepack’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GWASExactHW’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/GWASExactHW/libs/GWASExactHW.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/GWASExactHW/libs/GWASExactHW.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: mombf
Loading required package: mvtnorm
Error: package or namespace load failed for ‘mvtnorm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Error: package ‘mvtnorm’ could not be loaded
Execution halted
Non-standard file/directory found at top level:
  ‘TITEL’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gwfa’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
normalweight: no visible binding for global variable ‘NW_above’
normalweight: no visible binding for global variable ‘NW_below’
obese: no visible global function definition for ‘data’
obese: no visible binding for global variable ‘OB_above’
obese: no visible binding for global variable ‘OB_below’
overweight: no visible global function definition for ‘data’
overweight: no visible binding for global variable ‘OW_above’
overweight: no visible binding for global variable ‘OW_below’
Undefined global functions or variables:
  NW_above NW_below OB_above OB_below OW_above OW_below data
Consider adding
  importFrom("utils", "data")
to your NAMESPACE file.

Found the following calls to data() loading into the global environment:
File ‘GWG/R/obese.R’:
  data(OB_above)
  data(OB_below)
File ‘GWG/R/overweight.R’:
  data(OW_above)
  data(OW_below)
See section ‘Good practice’ in ‘?data’.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: digest
Error: package or namespace load failed for ‘digest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Error: package ‘digest’ could not be loaded
Execution halted
Found the following apparent S3 methods exported but not registered:
  $.guiWidget [[.guiWidget [[<-.guiWidget
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
Error in re-building vignettes:
  ...
Loading required package: gWidgets
Loading required package: gWidgetstcltk
Loading required package: tcltk
Loading required package: digest
Error: package or namespace load failed for ‘digest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Failed with error:  ‘package ‘digest’ could not be loaded’
Loading required package: gWidgetstcltk
Loading required package: digest
Error: package or namespace load failed for ‘digest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Failed with error:  ‘package ‘digest’ could not be loaded’

Error: processing vignette ‘gWidgets.Rnw’ failed with diagnostics:
 chunk 3 
Error in (function (classes, fdef, mtable)  : 
  unable to find an inherited method for function ‘.gbutton’ for signature ‘"guiWidgetsToolkittcltk"’
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: RGtk2
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RGtk2/libs/RGtk2.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RGtk2/libs/RGtk2.so: failed to map segment from shared object
Error: package or namespace load failed for ‘RGtk2’:
 .onLoad failed in loadNamespace() for ‘RGtk2’, details:
  call: install_all()
  error: This platform is not yet supported by the automatic installer. Please install GTK+ manually, if necessary. See: http://www.gtk.org
Error: package ‘RGtk2’ could not be loaded
In addition: Warning message:
Failed to load RGtk2 dynamic library, attempting to install it. 
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: gWidgets
Loading required package: tcltk
Loading required package: digest
Error: package or namespace load failed for ‘digest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Error: package ‘digest’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GWLelast’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Non-standard files/directories found at top level:
  ‘Summary_results.html’ ‘Weights_table.html’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gWQS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/truncnorm/libs/truncnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/truncnorm/libs/truncnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GWSDAT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘GxM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘gyriq’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/CompQuadForm/libs/CompQuadForm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/CompQuadForm/libs/CompQuadForm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘h2o4gpu’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘h2o’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘h5’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hablar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
hsTableReader: no visible global function definition for ‘object.size’
hsWriteTable: no visible global function definition for ‘write.table’
Undefined global functions or variables:
  object.size write.table
Consider adding
  importFrom("utils", "object.size", "write.table")
to your NAMESPACE file.
Rd file 'hsKeyValReader.Rd':
  \usage lines wider than 90 characters:
     hsKeyValReader(file = "", chunkSize = -1, skip = 0, sep = "\t",FUN = function(k, v) cat(paste(k, v, sep = ": "), sep = "\n"))

Rd file 'hsLineReader.Rd':
  \examples lines wider than 100 characters:
       str <- "Hello here are some\nlines of text\nto read in, chunkSize\nlines at a time.\nHow interesting.\nhuh?"

Rd file 'hsTableReader.Rd':
  \examples lines wider than 100 characters:
       str <- "key1\t3.9\nkey1\t8.9\nkey1\t1.2\nkey1\t3.9\nkey1\t8.9\nkey1\t1.2\nkey2\t9.9\nkey2\t10.1\nkey3\t1.0\nkey3\t3.4\nkey4\t9.4\n"
       hsTableReader(con,cols,chunkSize=5,FUN=reducerFullKeys,ignoreKey=FALSE,singleKey=FALSE,PFUN=reducerPartialKey)
       hsTableReader(con,cols,chunkSize=6,FUN=reducerKeyAtOnce,ignoreKey=FALSE,singleKey=TRUE,PFUN=reducerPartialKey)
       hsTableReader(con,cols,chunkSize=6,FUN=reducerManyCompleteKeys,ignoreKey=FALSE,singleKey=FALSE,PFUN=reducerPartialKey)

These lines will be truncated in the PDF manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘halfcircle’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...

Error: processing vignette ‘consensus_auc.Rnw’ failed with diagnostics:
 chunk 3 
Error : package or namespace load failed for ‘rpart’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rpart/libs/rpart.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rpart/libs/rpart.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Hankel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Hankel/libs/Hankel.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Hankel/libs/Hankel.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hansard’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hapassoc’:
 .onLoad failed in loadNamespace() for ‘hapassoc’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hapassoc/libs/hapassoc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hapassoc/libs/hapassoc.so: failed to map segment from shared object
Execution halted
allele.marq: no visible global function definition for ‘na.omit’
depart.LDL: no visible global function definition for ‘aov’
freq.all: no visible global function definition for ‘na.omit’
hapim.LD.add: no visible global function definition for ‘optim’
hapim.LDL.add: no visible global function definition for ‘optim’
obj.haplomax.HS.add: no visible global function definition for ‘aov’
obj.haplomax.add: no visible global function definition for ‘aov’
vrais.LD.add: no visible global function definition for ‘dnorm’
vrais.LDL.add.pere: no visible global function definition for ‘dnorm’
Undefined global functions or variables:
  aov dnorm na.omit optim
Consider adding
  importFrom("stats", "aov", "dnorm", "na.omit", "optim")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Hapi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Haplin’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bit/libs/bit.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bit/libs/bit.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘haploR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
AssignQTL : <anonymous>: no visible global function definition for
  ‘rgamma’
AssignSingleQTL: no visible global function definition for ‘rgamma’
ListQTL : <anonymous>: no visible global function definition for
  ‘rgamma’
SampleBaseHaplotype: no visible global function definition for ‘runif’
SampleHaplotype: no visible global function definition for ‘rpois’
SampleHaplotype: no visible global function definition for ‘runif’
SampleHaplotype: no visible global function definition for ‘rbinom’
Undefined global functions or variables:
  rbinom rgamma rpois runif
Consider adding
  importFrom("stats", "rbinom", "rgamma", "rpois", "runif")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘haplo.stats’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘haplotyper_vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘happybiRthday’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: hash
hash-2.2.6 provided by Decision Patterns

Loading required package: ape
Error: package or namespace load failed for ‘ape’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘ape’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HARModel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: FMStable
Error: package or namespace load failed for ‘FMStable’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FMStable/libs/FMStable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FMStable/libs/FMStable.so: failed to map segment from shared object
Error: package ‘FMStable’ could not be loaded
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘vignette.Rnw’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘harrietr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘harrypotter’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HARtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘harvestr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Harvest.Tree’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rpart/libs/rpart.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rpart/libs/rpart.so: failed to map segment from shared object
Execution halted
Namespace with empty importFrom: ‘utils’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hashFunction’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hashFunction/libs/hashFunction.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hashFunction/libs/hashFunction.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hashmap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
File
  LICENSE
is not mentioned in the DESCRIPTION file.
Non-standard file/directory found at top level:
  ‘dev’
Found the following apparent S3 methods exported but not registered:
  as.list.hash names.hash
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
hash: no visible global function definition for ‘new’
is.hash: no visible global function definition for ‘is’
Undefined global functions or variables:
  is new
Consider adding
  importFrom("methods", "is", "new")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Running ‘accessors.R’ [0s/0s]
  Running ‘clear.R’ [0s/0s]
  Running ‘has.key.R’ [0s/0s]
  Running ‘set.R’ [0s/0s]
Running the tests in ‘tests/accessors.R’ failed.
Complete output:
  > library(hash)
  hash-2.2.6 provided by Decision Patterns
  
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Running the tests in ‘tests/clear.R’ failed.
Complete output:
  > 
  > library(hash)
  hash-2.2.6 provided by Decision Patterns
  
  > library( testthat )
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hashr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hashr/libs/hashr.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hashr/libs/hashr.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘haven’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hawkes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘hazer-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: getBrightness
> ### Title: The brighness map of an image (0 to 1).
> ### Aliases: getBrightness
> 
> ### ** Examples
> 
> library(jpeg)
Error: package or namespace load failed for ‘jpeg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jpeg/libs/jpeg.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jpeg/libs/jpeg.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘detecting-hazy-images.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hazus’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hBayesDM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HBglm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ars/libs/ars.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ars/libs/ars.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hbmem’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hbmem/libs/hbmem.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hbmem/libs/hbmem.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hbm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hbsae’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
PoincarePlot: no visible global function definition for ‘plot’
PoincarePlot: no visible global function definition for ‘lines’
PoincarePlot: no visible global function definition for ‘lowess’
hctest: no visible global function definition for ‘cor.test’
rdplot: no visible global function definition for ‘plot’
rdplot: no visible global function definition for ‘lines’
rdplot: no visible global function definition for ‘lowess’
rdplot: no visible global function definition for ‘rgb’
simer: no visible global function definition for ‘runif’
simer: no visible global function definition for ‘rnorm’
Undefined global functions or variables:
  cor.test lines lowess plot rgb rnorm runif
Consider adding
  importFrom("grDevices", "rgb")
  importFrom("graphics", "lines", "plot")
  importFrom("stats", "cor.test", "lowess", "rnorm", "runif")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HCR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hda’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hdbinseg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HDCI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HDclust’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HDcpDetect’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/HDcpDetect/libs/HDcpDetect.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/HDcpDetect/libs/HDcpDetect.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hddplot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hdf5r’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bit/libs/bit.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bit/libs/bit.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HDGLM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/HDGLM/libs/HDGLM.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/HDGLM/libs/HDGLM.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: scalreg
Loading required package: lars
Error: package or namespace load failed for ‘lars’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lars/libs/lars.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lars/libs/lars.so: failed to map segment from shared object
Error: package ‘lars’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hdme’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘hdm-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: rlasso
> ### Title: rlasso: Function for Lasso estimation under homoscedastic and
> ###   heteroscedastic non-Gaussian disturbances
> ### Aliases: rlasso rlasso.character rlasso.default rlasso.formula
> 
> ### ** Examples
> 
> set.seed(1)
> n = 100 #sample size
> p = 100 # number of variables
> s = 3 # nubmer of variables with non-zero coefficients
> X = Xnames = matrix(rnorm(n*p), ncol=p)
> colnames(Xnames) <- paste("V", 1:p, sep="")
> beta = c(rep(5,s), rep(0,p-s))
> Y = X%*%beta + rnorm(n)
> reg.lasso <- rlasso(Y~Xnames)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so: failed to map segment from shared object
Calls: rlasso ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘hdm_introduction.Rnw’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hdnom’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: FNN
Error: package or namespace load failed for ‘FNN’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FNN/libs/FNN.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FNN/libs/FNN.so: failed to map segment from shared object
Error: package ‘FNN’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hdrcde’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hdrcde/libs/hdrcde.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hdrcde/libs/hdrcde.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hds’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HDtest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HDtweedie’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/HDtweedie/libs/HDtweedie.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/HDtweedie/libs/HDtweedie.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘healthcareai’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘heatmap3’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fastcluster/libs/fastcluster.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fastcluster/libs/fastcluster.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: plotly
Loading required package: ggplot2
Error: package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘ggplot2’ could not be loaded
Execution halted
heatmap.plus: no visible binding for global variable ‘dist’
heatmap.plus: no visible binding for global variable ‘hclust’
heatmap.plus : <anonymous>: no visible global function definition for
  ‘reorder’
heatmap.plus: no visible global function definition for ‘as.dendrogram’
heatmap.plus: no visible global function definition for
  ‘order.dendrogram’
heatmap.plus: no visible binding for global variable ‘sd’
heatmap.plus: no visible global function definition for ‘par’
heatmap.plus: no visible global function definition for ‘layout’
heatmap.plus: no visible global function definition for ‘image’
heatmap.plus: no visible global function definition for ‘axis’
heatmap.plus: no visible global function definition for ‘mtext’
heatmap.plus: no visible global function definition for ‘plot’
heatmap.plus: no visible global function definition for ‘frame’
heatmap.plus: no visible global function definition for ‘title’
Undefined global functions or variables:
  as.dendrogram axis dist frame hclust image layout mtext
  order.dendrogram par plot reorder sd title
Consider adding
  importFrom("graphics", "axis", "frame", "image", "layout", "mtext",
             "par", "plot", "title")
  importFrom("stats", "as.dendrogram", "dist", "hclust",
             "order.dendrogram", "reorder", "sd")
to your NAMESPACE file.
prepare_Rd: heatmap.plus.package.Rd:69: Dropping empty section \details
prepare_Rd: heatmap.plus.package.Rd:70: Dropping empty section \value
prepare_Rd: heatmap.plus.package.Rd:73: Dropping empty section \note
prepare_Rd: heatmap.plus.package.Rd:71: Dropping empty section \references
Rd file 'heatmap.plus.package.Rd':
  \usage lines wider than 90 characters:
     heatmap.plus(x, Rowv = NULL, Colv = if (symm) "Rowv" else NULL, distfun = dist, hclustfun = hclust, reorderfun = function(d, w) reorder ... [TRUNCATED]

These lines will be truncated in the PDF manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘heavy’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/heavy/libs/heavy.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/heavy/libs/heavy.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘heemod’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘helixvis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: energy
Error: package or namespace load failed for ‘energy’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘energy’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘helminthR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/png/libs/png.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/png/libs/png.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HEMDAG’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/graph/libs/BioC_graph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/graph/libs/BioC_graph.so: failed to map segment from shared object
Execution halted
Package suggested but not available for checking: ‘FRB’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘here’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/backports/libs/backports.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/backports/libs/backports.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HeritSeq’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Biobase/libs/Biobase.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Biobase/libs/Biobase.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hesim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hetGP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/DiceDesign/libs/DiceDesign.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/DiceDesign/libs/DiceDesign.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: metafor
Loading required package: Matrix
Error: package or namespace load failed for ‘Matrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘Matrix’ could not be loaded
Execution halted
Running examples in ‘heuristica-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: cueAccuracy
> ### Title: Calculate the accuracy of using a cue to predict a criterion.
> ### Aliases: cueAccuracy
> 
> ### ** Examples
> 
> cueValidity(c(5,1), c(1,0))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Matrix/libs/Matrix.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Matrix/libs/Matrix.so: failed to map segment from shared object
Calls: cueValidity ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘README.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hexbin’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hexSticker’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HextractoR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hextri’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: grplasso
Loading required package: splines
Loading required package: lattice
Error: package or namespace load failed for ‘lattice’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘lattice’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: glasso
Error: package or namespace load failed for ‘glasso’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/glasso/libs/glasso.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/glasso/libs/glasso.so: failed to map segment from shared object
Error: package ‘glasso’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hgutils’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lpSolve/libs/lpSolve.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lpSolve/libs/lpSolve.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HHG’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: surveillance
Loading required package: sp
Error: package or namespace load failed for ‘sp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘sp’ could not be loaded
Execution halted
Running examples in ‘hhi-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot_hhi
> ### Title: Plots a Herfindahl-Hirschman Index Time Series
> ### Aliases: plot_hhi
> 
> ### ** Examples
> 
> hhi <- c(45,60,50,100,94,15,88,200,215,68,
+ 47,62,52,102,96,17,90,202,217,70)
> year <- c(1990,1991,1992,1993,1994,1995,1996,1997,1998,1999,
+ 2000,2001,2002,2003,2004,2005,2006,2007,2008,2009)
> data <- data.frame(hhi, year)
> plot_hhi(data, "year", "hhi")
Error: Package "ggplot2" needed for this function to work. Please install it.
Execution halted
Running examples in ‘hht-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: HHSpectrum
> ### Title: Generate Hilbert spectrum
> ### Aliases: HHSpectrum
> ### Keywords: ts
> 
> ### ** Examples
> 
> data(PortFosterEvent)
> 
> emd.result <- Sig2IMF(sig, tt)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so: failed to map segment from shared object
Calls: Sig2IMF ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Warning: namespace ‘memoise’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘memoise’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
See chapter ‘System and foreign language interfaces’ in the ‘Writing R
Extensions’ manual.
Warning: namespace ‘memoise’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘memoise’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Running examples in ‘HIBPwned-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: account_breaches
> ### Title: Search for data breaches associated with one or more accounts.
> ### Aliases: account_breaches
> 
> ### ** Examples
> 
> account_breaches(c("steff.sullivan@gmail.com","stephanie.g.locke@gmail.com"))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: account_breaches ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘HIBP.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HiCblock’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/S4Vectors/libs/S4Vectors.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/S4Vectors/libs/S4Vectors.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: GenomicRanges
Loading required package: stats4
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: ‘BiocGenerics’

The following objects are masked from ‘package:parallel’:

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from ‘package:stats’:

    IQR, mad, sd, var, xtabs

The following objects are masked from ‘package:base’:

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, basename, cbind, colMeans, colSums, colnames,
    dirname, do.call, duplicated, eval, evalq, get, grep, grepl,
    intersect, is.unsorted, lapply, mapply, match, mget, order, paste,
    pmax, pmax.int, pmin, pmin.int, rank, rbind, rowMeans, rowSums,
    rownames, sapply, setdiff, sort, table, tapply, union, unique,
    unsplit, which, which.max, which.min

Loading required package: S4Vectors
Error: package or namespace load failed for ‘S4Vectors’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/S4Vectors/libs/S4Vectors.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/S4Vectors/libs/S4Vectors.so: failed to map segment from shared object
Error: package ‘S4Vectors’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HiCglmi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/S4Vectors/libs/S4Vectors.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/S4Vectors/libs/S4Vectors.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HiClimR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/HiClimR/libs/HiClimR.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/HiClimR/libs/HiClimR.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HiCseg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/HiCseg/libs/HiCseg.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/HiCseg/libs/HiCseg.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HiddenMarkov’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/HiddenMarkov/libs/HiddenMarkov.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/HiddenMarkov/libs/HiddenMarkov.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HiDimDA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/HiDimDA/libs/HiDimDA.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/HiDimDA/libs/HiDimDA.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hierarchicalDS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hierarchicalSets’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hierband’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hierband/libs/hierband.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hierband/libs/hierband.so: failed to map segment from shared object
Execution halted
booties: no visible binding for global variable ‘sd’
booties: no visible binding for global variable ‘quantile’
hierDiversity: no visible global function definition for
  ‘txtProgressBar’
hierDiversity: no visible global function definition for
  ‘setTxtProgressBar’
Undefined global functions or variables:
  quantile sd setTxtProgressBar txtProgressBar
Consider adding
  importFrom("stats", "quantile", "sd")
  importFrom("utils", "setTxtProgressBar", "txtProgressBar")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HierDpart’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hierfstat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hierNet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hierNet/libs/hierNet.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hierNet/libs/hierNet.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rneos
Loading required package: RCurl
Loading required package: bitops
Error: package or namespace load failed for ‘bitops’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Error: package ‘bitops’ could not be loaded
Execution halted
compute.contrasts: no visible binding for global variable ‘sd’
compute.contrasts: no visible global function definition for ‘cor’
compute.contrasts: no visible global function definition for ‘sd’
plot.estfdr: no visible global function definition for ‘plot’
plot.hiertest: no visible global function definition for ‘plot’
plot.hiertest: no visible global function definition for ‘legend’
Undefined global functions or variables:
  cor legend plot sd
Consider adding
  importFrom("graphics", "legend", "plot")
  importFrom("stats", "cor", "sd")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘highcharter’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: fastclime
Loading required package: lattice
Error: package or namespace load failed for ‘lattice’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘lattice’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HighDimOut’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘highlightHTML-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: table_id_inject
> ### Title: Table hash addition for markup
> ### Aliases: table_id_inject
> 
> ### ** Examples
> 
> library(dplyr)
Error: package or namespace load failed for ‘dplyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘the_basics.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘highlight’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/highlight/libs/highlight.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/highlight/libs/highlight.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘highr-custom.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
BenjaminiHochberg: no visible global function definition for ‘p.adjust’
CaoKosorok : CKfunc: no visible global function definition for ‘pnorm’
CaoKosorok : <anonymous>: no visible global function definition for
  ‘pnorm’
StoreyTibshirani: no visible global function definition for
  ‘smooth.spline’
plotI_Lines: no visible global function definition for ‘par’
plotI_Lines: no visible global function definition for ‘lines’
plotI_Lines: no visible global function definition for ‘legend’
plotI_Points: no visible global function definition for ‘points’
plotI_Points: no visible global function definition for ‘legend’
tStatistic : <anonymous>: no visible global function definition for
  ‘t.test’
venn2: no visible global function definition for ‘plot.new’
venn3: no visible global function definition for ‘plot.new’
Undefined global functions or variables:
  legend lines p.adjust par plot.new pnorm points smooth.spline t.test
Consider adding
  importFrom("graphics", "legend", "lines", "par", "plot.new", "points")
  importFrom("stats", "p.adjust", "pnorm", "smooth.spline", "t.test")
to your NAMESPACE file.
Running examples in ‘higrad-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: higrad
> ### Title: Fitting HiGrad
> ### Aliases: higrad
> 
> ### ** Examples
> 
> # fitting linear regression on a simulated dataset
> n <- 1e3
> d <- 10
> sigma <- 0.1
> theta <- rep(1, d)
> x <- matrix(rnorm(n * d), n, d)
> y <- as.numeric(x %*% theta + rnorm(n, 0, sigma))
> fit <- higrad(x, y, model = "lm")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: higrad ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hillmakeR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hillmakeR/libs/hillmakeR.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hillmakeR/libs/hillmakeR.so: failed to map segment from shared object
Execution halted
Running examples in ‘hillR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: hill_func
> ### Title: Functional diversity through Hill Numbers
> ### Aliases: hill_func
> 
> ### ** Examples
> 
> dummy = FD::dummy
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: :: ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
data_simu: no visible global function definition for ‘runif’
data_simu: no visible global function definition for ‘rbinom’
data_simu: no visible global function definition for ‘rnorm’
Undefined global functions or variables:
  rbinom rnorm runif
Consider adding
  importFrom("stats", "rbinom", "rnorm", "runif")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: ncvreg
Error: package or namespace load failed for ‘ncvreg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ncvreg/libs/ncvreg.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ncvreg/libs/ncvreg.so: failed to map segment from shared object
Error: package ‘ncvreg’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hint’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hint/libs/hint.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hint/libs/hint.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hipread’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/HI/libs/HI.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/HI/libs/HI.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HiResTEC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Biobase/libs/Biobase.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Biobase/libs/Biobase.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hIRT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘HistData-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: Bowley
> ### Title: Bowley's data on values of British and Irish trade, 1855-1899
> ### Aliases: Bowley
> ### Keywords: datasets
> 
> ### ** Examples
> 
> data(Bowley)
> 
> # plot the data 
> with(Bowley,plot(Year, Value, type='b', 
+ 	ylab="Value of British and Irish Exports",
+ 	main="Bowley's example of the method of smoothing curves"))
> 
> # find moving averages-- use center alignment (requires width=ODD)
> require(gtools, warn.conflicts=FALSE)
Loading required package: gtools
Error: package or namespace load failed for ‘gtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
> mav3<-running(Bowley$Value, width=3, align="center")
Error in running(Bowley$Value, width = 3, align = "center") : 
  could not find function "running"
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Snow_deaths-duplicates.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HistDAWass’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘histmdl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/histmdl/libs/histmdl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/histmdl/libs/histmdl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HistogramTools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ash/libs/ash.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ash/libs/ash.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘histry’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/graph/libs/BioC_graph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/graph/libs/BioC_graph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hitandrun’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hitandrun/libs/hitandrun.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hitandrun/libs/hitandrun.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hive’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HiveR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jpeg/libs/jpeg.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jpeg/libs/jpeg.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hkclustering’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so: failed to map segment from shared object
Execution halted
Package suggested but not available for checking: ‘FGN’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HKprocess’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HLMdiag’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HLSM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HMB’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HMDHFDplus’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Found the following apparent S3 methods exported but not registered:
  summary.hmeasure
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
HMeasure: no visible global function definition for ‘complete.cases’
HMeasure : HMeasure.single: no visible global function definition for
  ‘chull’
HMeasure : HMeasure.single: no visible global function definition for
  ‘pbeta’
plotROC: no visible global function definition for ‘plot’
plotROC: no visible global function definition for ‘lines’
plotROC: no visible global function definition for ‘legend’
plotROC: no visible global function definition for ‘dbeta’
plotROC: no visible global function definition for ‘density’
Undefined global functions or variables:
  chull complete.cases dbeta density legend lines pbeta plot
Consider adding
  importFrom("grDevices", "chull")
  importFrom("graphics", "legend", "lines", "plot")
  importFrom("stats", "complete.cases", "dbeta", "density", "pbeta")
to your NAMESPACE file.
The following files look like leftovers/mistakes:
  ‘hmeasure.dvi’
Please remove them from your package.
Running examples in ‘hmeasure-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: HMeasure
> ### Title: Computes the H-measure, AUC, and several other scalar
> ###   classification performance metrics.
> ### Aliases: HMeasure
> ### Keywords: ~classif
> 
> ### ** Examples
> 
> 
> 
> # load the data
> library(MASS) 
> library(class) 
Error: package or namespace load failed for ‘class’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...

Error: processing vignette ‘hmeasure.Rnw’ failed with diagnostics:
 chunk 1 
Error : package or namespace load failed for ‘class’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘myvignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
baumwelchcont: no visible global function definition for ‘dnorm’
hmmcontSimul: no visible global function definition for ‘rnorm’
hmmcontSimul: no visible global function definition for ‘rbinom’
plot.ContObservHMM: no visible global function definition for ‘plot’
plot.ContObservHMM: no visible global function definition for ‘lines’
statesDistributionsPlot: no visible global function definition for
  ‘dnorm’
statesDistributionsPlot: no visible global function definition for ‘sd’
statesDistributionsPlot: no visible global function definition for
  ‘plot’
statesDistributionsPlot: no visible global function definition for
  ‘lines’
statesDistributionsPlot: no visible global function definition for
  ‘legend’
summary.ContObservHMM: no visible global function definition for ‘sd’
Undefined global functions or variables:
  dnorm legend lines plot rbinom rnorm sd
Consider adding
  importFrom("graphics", "legend", "lines", "plot")
  importFrom("stats", "dnorm", "rbinom", "rnorm", "sd")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: matrixcalc
Loading required package: mvtnorm
Error: package or namespace load failed for ‘mvtnorm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Error: package ‘mvtnorm’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hmm.discnp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nnet/libs/nnet.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nnet/libs/nnet.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HMMEsolver’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HMMextra0s’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hmmm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HMMoce’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
dishonestCasino: no visible global function definition for ‘plot’
dishonestCasino: no visible global function definition for ‘axis’
dishonestCasino: no visible global function definition for ‘text’
dishonestCasino: no visible global function definition for ‘rect’
dishonestCasino: no visible global function definition for ‘rgb’
dishonestCasino: no visible global function definition for ‘points’
Undefined global functions or variables:
  axis plot points rect rgb text
Consider adding
  importFrom("grDevices", "rgb")
  importFrom("graphics", "axis", "plot", "points", "rect", "text")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: dirmult
Error: package or namespace load failed for ‘HMP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HMPTrees’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hms’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hNMF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hoa’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/statmod/libs/statmod.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/statmod/libs/statmod.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hoardeR’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hoardr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rappdirs/libs/rappdirs.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rappdirs/libs/rappdirs.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hogsvdR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘homals’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hommel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘homologene-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: homologene
> ### Title: Get homologues of given genes
> ### Aliases: homologene
> 
> ### ** Examples
> 
> homologene(c('Eno2','17441'), inTax = 10090, outTax = 9606)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: homologene ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘homomorpheR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gmp/libs/gmp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gmp/libs/gmp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HoRM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
hornpa: no visible global function definition for ‘rnorm’
hornpa: no visible global function definition for ‘cor’
hornpa: no visible global function definition for ‘quantile’
Undefined global functions or variables:
  cor quantile rnorm
Consider adding
  importFrom("stats", "cor", "quantile", "rnorm")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘horserule’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘horseshoe-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: HS.normal.means
> ### Title: The horseshoe prior for the sparse normal means problem
> ### Aliases: HS.normal.means
> 
> ### ** Examples
> 
> #Empirical Bayes example with 20 signals, rest is noise
> #Posterior mean for the signals is plotted
> #And variable selection is performed using the credible intervals
> #And the credible intervals are plotted
> truth <- c(rep(0, 80), rep(8, 20))
> data <-  truth + rnorm(100, 1)
> tau.hat <- HS.MMLE(data, Sigma2 = 1)
> res.HS1 <- HS.normal.means(data, method.tau = "fixed", tau = tau.hat,
+ method.sigma = "fixed", Sigma2 = 1)
[1] 1000
[1] 2000
[1] 3000
[1] 4000
[1] 5000
[1] 6000
> #Plot the posterior mean against the data (signals in blue)
> plot(data, res.HS1$BetaHat, col = c(rep("black", 80), rep("blue", 20)))
> #Find the selected betas (ideally, the last 20 are equal to 1)
> HS.var.select(res.HS1, data, method = "intervals")
  [1] 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
 [38] 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0
 [75] 0 0 0 0 0 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
> #Plot the credible intervals
> library(Hmisc)
Loading required package: lattice
Loading required package: survival
Error: package or namespace load failed for ‘survival’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/survival/libs/survival.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/survival/libs/survival.so: failed to map segment from shared object
Error: package ‘survival’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HotDeckImputation’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: multicool
Loading required package: Rcpp
Error: package or namespace load failed for ‘Rcpp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘Rcpp’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hpiR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hpoPlot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/graph/libs/BioC_graph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/graph/libs/BioC_graph.so: failed to map segment from shared object
Execution halted
bracket: no visible global function definition for ‘segments’
Undefined global functions or variables:
  segments
Consider adding
  importFrom("graphics", "segments")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hqreg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hqreg/libs/hqreg.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hqreg/libs/hqreg.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hrbrthemes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hrIPW’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HRQoL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  sar.cpp:210:32: warning: explicitly assigning value of variable of type 'arma::sp_mat' (aka 'SpMat<double>') to itself [-Wself-assign-overloaded]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/HSAR.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HSAR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘HSAUR2-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: BCG
> ### Title: BCG Vaccine Data
> ### Aliases: BCG
> ### Keywords: datasets
> 
> ### ** Examples
> 
> 
>   data("BCG", package = "HSAUR2")
> 
>   ### sort studies w.r.t. sample size
>   BCG <- BCG[order(rowSums(BCG[,2:5])),]
> 
>   ### to long format
>   BCGlong <- with(BCG, data.frame(Freq = c(BCGTB, BCGVacc - BCGTB, 
+                                            NoVaccTB, NoVacc - NoVaccTB),
+                   infected = rep(rep(factor(c("yes", "no")), 
+                                  rep(nrow(BCG), 2)), 2),
+                   vaccined = rep(factor(c("yes", "no")), 
+                                  rep(nrow(BCG) * 2, 2)),
+                   study = rep(factor(Study, levels = as.character(Study)), 
+                               4)))
> 
>   ### doubledecker plot
>   library("vcd")
Loading required package: grid
Error: package or namespace load failed for ‘vcd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Loading required package: HSAUR2
Loading required package: tools

Error: processing vignette 'Ch_analysing_longitudinal_dataI.Rnw' failed with diagnostics:
 chunk 3 (label = ALDI-setup) 
Error : package or namespace load failed for 'lme4' in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Running examples in ‘HSAUR3-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: BCG
> ### Title: BCG Vaccine Data
> ### Aliases: BCG
> ### Keywords: datasets
> 
> ### ** Examples
> 
> 
>   data("BCG", package = "HSAUR3")
> 
>   ### sort studies w.r.t. sample size
>   BCG <- BCG[order(rowSums(BCG[,2:5])),]
> 
>   ### to long format
>   BCGlong <- with(BCG, data.frame(Freq = c(BCGTB, BCGVacc - BCGTB, 
+                                            NoVaccTB, NoVacc - NoVaccTB),
+                   infected = rep(rep(factor(c("yes", "no")), 
+                                  rep(nrow(BCG), 2)), 2),
+                   vaccined = rep(factor(c("yes", "no")), 
+                                  rep(nrow(BCG) * 2, 2)),
+                   study = rep(factor(Study, levels = as.character(Study)), 
+                               4)))
> 
>   ### doubledecker plot
>   library("vcd")
Loading required package: grid
Error: package or namespace load failed for ‘vcd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Loading required package: HSAUR3
Loading required package: tools
Loading required package: Matrix
Error: package or namespace load failed for 'Matrix' in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Matrix/libs/Matrix.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Matrix/libs/Matrix.so: failed to map segment from shared object

Error: processing vignette 'Ch_analysing_longitudinal_dataI.Rnw' failed with diagnostics:
 chunk 3 (label = ALDI-setup) 
Error : package 'Matrix' could not be loaded
Execution halted
Running examples in ‘HSAUR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: voting
> ### Title: House of Representatives Voting Data
> ### Aliases: voting
> ### Keywords: datasets
> 
> ### ** Examples
> 
> 
>   data("voting", package = "HSAUR")
>   require("MASS")
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
>   voting_mds <- isoMDS(voting)
Error in isoMDS(voting) : could not find function "isoMDS"
Execution halted
Error in re-building vignettes:
  ...
Loading required package: HSAUR
Loading required package: tools

Error: processing vignette 'Ch_analysing_longitudinal_dataI.Rnw' failed with diagnostics:
 chunk 2 (label = ALDI-setup) 
Error : package or namespace load failed for 'Matrix' in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Matrix/libs/Matrix.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Matrix/libs/Matrix.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hSDM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
hsicCCA: no visible global function definition for ‘median’
hsicCCA: no visible global function definition for ‘dist’
hsicCCAfunc: no visible global function definition for ‘rnorm’
hsicCCAfunc: no visible global function definition for ‘runif’
hsicCCAfunc: no visible global function definition for ‘optim’
ktaCCA: no visible global function definition for ‘median’
ktaCCA: no visible global function definition for ‘dist’
ktaCCAfunc: no visible global function definition for ‘rnorm’
ktaCCAfunc: no visible global function definition for ‘runif’
ktaCCAfunc: no visible global function definition for ‘optim’
Undefined global functions or variables:
  dist median optim rnorm runif
Consider adding
  importFrom("stats", "dist", "median", "optim", "rnorm", "runif")
to your NAMESPACE file.
Rd file 'hsicCCA.Rd':
  \usage lines wider than 90 characters:
     hsicCCA(x, y, M, sigmax = NULL, sigmay = NULL, numrepeat = 5, numiter = 100, reltolstop = 1e-04)

Rd file 'ktaCCA.Rd':
  \usage lines wider than 90 characters:
     ktaCCA(x, y, M, sigmax = NULL, sigmay = NULL, numrepeat = 5, numiter = 100, reltolstop = 1e-04)

These lines will be truncated in the PDF manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hsm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hsm/libs/hsm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hsm/libs/hsm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: snowfall
Loading required package: snow
Error: package or namespace load failed for ‘hsphase’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: bcv
Error: package or namespace load failed for ‘bcv’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bcv/libs/bcv.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bcv/libs/bcv.so: failed to map segment from shared object
Error: package ‘bcv’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘htdp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘htmlTable’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘htmltab.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  language.c:41:5: warning: flexible array initialization is a GNU extension [-Wgnu-flexible-array-initializer]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/htmltidy.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘htmltidy’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘htmltools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
BasicHTML: no visible global function definition for ‘png’
BasicHTML: no visible global function definition for ‘dev.list’
BasicHTML: no visible global function definition for ‘dev.off’
FramedHTML: no visible global function definition for ‘graphics.off’
Undefined global functions or variables:
  dev.list dev.off graphics.off png
Consider adding
  importFrom("grDevices", "dev.list", "dev.off", "graphics.off", "png")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘htmlwidgets’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: parallel
Error: package or namespace load failed for ‘htree’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/htree/libs/htree.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/htree/libs/htree.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HTSCluster’:
 .onLoad failed in loadNamespace() for ‘limma’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/limma/libs/limma.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/limma/libs/limma.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘httk’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘httpcache’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: httr
Error: package or namespace load failed for ‘httping’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
getToHost: no visible global function definition for ‘make.socket’
getToHost: no visible global function definition for ‘write.socket’
getToHost: no visible global function definition for ‘read.socket’
getToHost: no visible global function definition for ‘close.socket’
postToHost: no visible global function definition for ‘runif’
simplePostToHost: no visible global function definition for
  ‘make.socket’
simplePostToHost: no visible global function definition for
  ‘write.socket’
simplePostToHost: no visible global function definition for
  ‘read.socket’
simplePostToHost: no visible global function definition for
  ‘close.socket’
Undefined global functions or variables:
  close.socket make.socket read.socket runif write.socket
Consider adding
  importFrom("stats", "runif")
  importFrom("utils", "close.socket", "make.socket", "read.socket",
             "write.socket")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘httpuv’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘httr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: BROWSE
> ### Title: Open specified url in browser.
> ### Aliases: BROWSE
> 
> ### ** Examples
> 
> BROWSE("http://google.com")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Calls: BROWSE ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘api-packages.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hues’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/colorspace/libs/colorspace.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/colorspace/libs/colorspace.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘humaniformat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘humanize’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘humanleague’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘humidity-measures.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hunspell’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘hurdat.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Package suggested but not available for checking: ‘hurricaneexposuredata’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hurricaneexposure’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hutils’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘huxtable’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HWEBayes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
HW.plain: no visible global function definition for ‘runif’
Undefined global functions or variables:
  runif
Consider adding
  importFrom("stats", "runif")
to your NAMESPACE file.
getHwriterVersion: no visible global function definition for
  ‘sessionInfo’
hmapRowCol: no visible global function definition for ‘na.omit’
hwriteImage: no visible global function definition for ‘dev.print’
hwriteImage: no visible binding for global variable ‘png’
showExample: no visible global function definition for ‘browseURL’
Undefined global functions or variables:
  browseURL dev.print na.omit png sessionInfo
Consider adding
  importFrom("grDevices", "dev.print", "png")
  importFrom("stats", "na.omit")
  importFrom("utils", "browseURL", "sessionInfo")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hwwntest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HWxtest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/HWxtest/libs/HWxtest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/HWxtest/libs/HWxtest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hybridEnsemble’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForest/libs/randomForest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForest/libs/randomForest.so: failed to map segment from shared object
Execution halted
Running examples in ‘HybridFS-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: HybridFS
> ### Title: A Hybrid Feature Selection Function
> ### Aliases: HybridFS
> 
> ### ** Examples
> 
> FS=HybridFS(input.df=validation,target.var.name="Survived")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForest/libs/randomForest.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForest/libs/randomForest.so: failed to map segment from shared object
Calls: HybridFS ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hybridHclust’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: nsRFA
Error: package or namespace load failed for ‘nsRFA’:
 .onLoad failed in loadNamespace() for ‘nsRFA’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nsRFA/libs/nsRFA.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nsRFA/libs/nsRFA.so: failed to map segment from shared object
Error: package ‘nsRFA’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hydrolinks’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hydroPSO’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘hydroscoper-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: find_stations
> ### Title: Find nearest stations using a point's coordinates
> ### Aliases: find_stations
> 
> ### ** Examples
> 
> 
> # find the five nearest stations to a point near Thessaloniki,
> # (lon, lat) = (22.97, 40.60)
> head(find_stations(22.97, 40.60), 5)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: head ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘intro_hydroscoper.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hyfo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: magrittr
Error: package or namespace load failed for ‘hyper2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hypercube’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: magicaxis
Error: package or namespace load failed for ‘magicaxis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘magicaxis’ could not be loaded
Execution halted
Error in .requirePackage(package) : 
    unable to find required package 'flowCore'
  Calls: <Anonymous> ... .extendsForS3 -> extends -> getClassDef -> .requirePackage
  Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Hypergate.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hypergea’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hypergea/libs/hypergea.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hypergea/libs/hypergea.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hypergeo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hyperSMURF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RANN/libs/RANN.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RANN/libs/RANN.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘hyphenatr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
conint: no visible global function definition for ‘sd’
findroot: no visible global function definition for ‘integrate’
hypothesis: no visible global function definition for ‘sd’
hypothesis: no visible global function definition for ‘integrate’
Undefined global functions or variables:
  integrate sd
Consider adding
  importFrom("stats", "integrate", "sd")
to your NAMESPACE file.
Rd file 'conint.Rd':
  \usage lines wider than 90 characters:
     conint(TrnX = NULL, TrnY = NULL, m, n1, n2, s1, s2, side = "both", alpha = 0.95, method = "n")

Rd file 'hypothesis-package.Rd':
  \examples lines wider than 100 characters:
     hypothesis(TrnX=c(3,4,5),TrnY=c(4,5,6),m,u0=4,3,3,s1=NULL,s2=NULL,sigma1=NULL,sigma2=NULL,alpha=0.05,method="n",H0="u=u0",p)

Rd file 'hypothesis.Rd':
  \usage lines wider than 90 characters:
     hypothesis(TrnX = NULL, TrnY = NULL, m, u0, n1, n2, s1 = NULL, s2 = NULL, sigma1 = NULL, sigma2 = NULL, alpha = 0.05, method = "n", H0  ... [TRUNCATED]
  \examples lines wider than 100 characters:
      hypothesis(TrnX=c(3,4,5),TrnY=c(4,5,6),m,u0=4,3,3,s1=NULL,s2=NULL,sigma1=NULL,sigma2=NULL,alpha=0.05,method="n",H0="u=u0",p)

These lines will be truncated in the PDF manual.
Running examples in ‘hypothesisr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: hs_read
> ### Title: Retrieve a single annotation by ID
> ### Aliases: hs_read
> 
> ### ** Examples
> 
> hs_read("WFMnSC3FEeaNvLeGkQeJbg")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Calls: hs_read ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘HYRISK’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sets/libs/sets.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sets/libs/sets.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘vignette-IAbin.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘iadf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IAPWS95’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/IAPWS95/libs/IAPWS95.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/IAPWS95/libs/IAPWS95.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IAT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IATscores’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘iBATCGH’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IBCF.MTME’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
ibdhap.barplot: no visible global function definition for ‘plot’
ibdhap.barplot: no visible global function definition for ‘rect’
ibdhap.compare.loci: no visible global function definition for ‘hist’
ibdhap.compare.segs: no visible global function definition for ‘tail’
ibdhap.make.calls: no visible global function definition for
  ‘count.fields’
ibdhap.make.calls: no visible global function definition for
  ‘read.table’
ibdhap.make.true: no visible global function definition for
  ‘read.table’
ibdhap.names: no visible global function definition for ‘count.fields’
ibdhap.names: no visible global function definition for ‘read.table’
ibdhap.reduce.states: no visible global function definition for
  ‘read.table’
ibdhap.reduce.states: no visible global function definition for
  ‘write.table’
Undefined global functions or variables:
  count.fields hist plot read.table rect tail write.table
Consider adding
  importFrom("graphics", "hist", "plot", "rect")
  importFrom("utils", "count.fields", "read.table", "tail",
             "write.table")
to your NAMESPACE file.
Non-standard file/directory found at top level:
  ‘perl’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ibdreg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ibdreg/libs/ibdreg.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ibdreg/libs/ibdreg.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  IBDsim.c:27:10: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  IBDsim.c:39:20: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  IBDsim.c:54:10: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  IBDsim.c:61:10: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/IBDsim.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: paramlink
Error: package or namespace load failed for ‘paramlink’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘paramlink’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ibmcraftr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Package suggested but not available for checking: ‘SparkR’
Loading this package had a fatal error status code 1
Loading log:
Loading required package: RODBC
Error: package or namespace load failed for ‘RODBC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RODBC/libs/RODBC.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RODBC/libs/RODBC.so: failed to map segment from shared object
Error: package ‘RODBC’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ibm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ibmsunburst’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Iboot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Iboot/libs/Iboot.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Iboot/libs/Iboot.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ibs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: pamr
Loading required package: cluster
Error: package or namespace load failed for ‘cluster’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so: failed to map segment from shared object
Error: package ‘cluster’ could not be loaded
Execution halted
Rd file 'curveConcent.Rd':
  \examples lines wider than 100 characters:
     curveConcent(x=hhbudgets[, "transporte"], y=hhbudgets[,"ingreso"], w=hhbudgets[,"factor"], col="red", xlab="Ranking by income")
     curveConcent(x=hhbudgets[, "mantenimiento"], y=hhbudgets[,"ingreso"], w=hhbudgets[,"factor"], col="blue", add=TRUE)
     curveConcent(x=hhbudgets[, "publico"], y=hhbudgets[,"ingreso"], w=hhbudgets[,"factor"], col="green", add=TRUE)
     legend("topleft", legend = c("All transport", "Private: Maintenance and repair", "Public transport"), col=c("red", "blue", "green"), lt ... [TRUNCATED]

Rd file 'decompAtkinson.Rd':
  \examples lines wider than 100 characters:
     summary(decompAtkinson(x=hhbudgets[,"transporte"], z=hhbudgets[,"tenencia"], w=hhbudgets[,"factor"], decomp="DP", ELMO=FALSE))
     summary(decompAtkinson(x=hhbudgets[,"transporte"], z=hhbudgets[,"tenencia"], w=hhbudgets[,"factor"], decomp="DP", epsilon=0.25))

Rd file 'decompGEI.Rd':
  \examples lines wider than 100 characters:
     summary(decompGEI(x=hhbudgets[,"transporte"], z=hhbudgets[,"tenencia"], w=hhbudgets[,"factor"], alpha=1.5))

Rd file 'decompSGini.Rd':
  \examples lines wider than 100 characters:
     decompSGini(x=hhbudgets[,"transporte"], z=hhbudgets[,"estructura"], w=hhbudgets[,"factor"], decomp="YL", ELMO=FALSE)
     summary(decompSGini(x=hhbudgets[,"transporte"], z=hhbudgets[,"tenencia"], w=hhbudgets[,"factor"], param=1.5))

These lines will be truncated in the PDF manual.
'library' or 'require' call to ‘tcltk’ which was already attached by Depends.
  Please remove these calls from your code.
Package in Depends field not imported from: ‘tcltk’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Rd file 'hts.Rd':
  \examples lines wider than 100 characters:
                   measure="mpi384_measure.txt",control="mpi384_control.txt",dilution="mpi384_dilution.txt",

Rd file 'ic50.Rd':
  \examples lines wider than 100 characters:
                    measure="mpi384_measure.txt",control="mpi384_control.txt",dilution="mpi384_dilution.txt",

These lines will be truncated in the PDF manual.
ICA: no visible global function definition for ‘runif’
plot.ICA: no visible global function definition for ‘plot’
Undefined global functions or variables:
  plot runif
Consider adding
  importFrom("graphics", "plot")
  importFrom("stats", "runif")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ical’:
 .onLoad failed in loadNamespace() for ‘ical’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘icamix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ICAOD’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘icapca’:
 .onLoad failed in loadNamespace() for ‘icapca’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/icapca/libs/icapca.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/icapca/libs/icapca.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ICcalib’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘iccbeta’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘ICCbin-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: iccbin
> ### Title: Estimates Intracluster Correlation coefficients (ICC) and it's
> ###   confidence intervals (CI)
> ### Aliases: iccbin
> 
> ### ** Examples
> 
> bccdata <- rcbin(prop = .4, prvar = .2, noc = 30, csize = 20, csvar = .2, rho = .2)
> iccbin(cid = cid, y = y, data = bccdata)
Warning in iccbin(cid = cid, y = y, data = bccdata) :
  One or Both of 'Zou and Donner's Modified Wald' Confidence Limits Fell Outside of [0, 1]
Error: Package 'lme4' is needed for methods 'lin' and 'sim'. Please install it.
Execution halted
ICCbare: no visible global function definition for ‘na.omit’
ICCbare: no visible global function definition for ‘formula’
ICCbare: no visible global function definition for ‘replications’
ICCbare: no visible global function definition for ‘aggregate’
ICCbare: no visible global function definition for ‘anova’
ICCbare: no visible global function definition for ‘aov’
ICCbareF: no visible global function definition for ‘aggregate’
ICCest: no visible global function definition for ‘na.omit’
ICCest: no visible global function definition for ‘anova’
ICCest: no visible global function definition for ‘aov’
ICCest: no visible global function definition for ‘aggregate’
ICCest: no visible global function definition for ‘qf’
ICCest: no visible global function definition for ‘qnorm’
Nest: no visible global function definition for ‘qnorm’
effort : CIW: no visible global function definition for ‘qf’
effort: no visible global function definition for ‘plot’
effort: no visible global function definition for ‘axis’
effort: no visible global function definition for ‘lines’
effort: no visible global function definition for ‘legend’
Undefined global functions or variables:
  aggregate anova aov axis formula legend lines na.omit plot qf qnorm
  replications
Consider adding
  importFrom("graphics", "axis", "legend", "lines", "plot")
  importFrom("stats", "aggregate", "anova", "aov", "formula", "na.omit",
             "qf", "qnorm", "replications")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘icdGLM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: icd.data
Error: package or namespace load failed for ‘icd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘icensmis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running ‘testthat.R’ [0s/0s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > ## load dependencies
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Running examples in ‘icesSAG-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: findAssessmentKey
> ### Title: Find a Key
> ### Aliases: findAssessmentKey findAssessmentKey findKey
> 
> ### ** Examples
> 
> findAssessmentKey("cod-347d", 2015, full = TRUE)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Calls: findAssessmentKey ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘icesVocab’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ic.infer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Execution halted
Depends: includes the non-default packages:
  'lattice', 'caTools', 'gdata', 'gtools', 'gplots', 'parallel'
Adding so many packages to the search path is excessive and importing
selectively is preferable.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘icmm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  RccpSource_.cpp:978:54: warning: explicitly assigning value of variable of type 'Rcpp::NumericVector' (aka 'Vector<14>') to itself [-Wself-assign-overloaded]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/icosa.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘icpsrdata’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ICRanks’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘icr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘icRSF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: ICS
Loading required package: mvtnorm
Error: package or namespace load failed for ‘mvtnorm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Error: package ‘mvtnorm’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ICsurv’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Running examples in ‘icsw-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: compliance.score
> ### Title: Estimate compliance scores using covariates.
> ### Aliases: compliance.score
> ### Keywords: ~kwd1 ~kwd2
> 
> ### ** Examples
> 
> 
> # Load example dataset, see help(FoxDebate) for details
> data(FoxDebate)
> 
> # Matrix of covariates
> covmat <- with(FoxDebate, cbind(partyid, pnintst, watchnat, educad, readnews, 
+                                 gender, income, white))
> 
> # Estimate compliance scores with covariates, assuming (default) 
> #   case of two-sided non-compliance
> cscoreout <- with(FoxDebate, compliance.score(D = watchpro, Z = conditn,
+                                               W = covmat))
Error in compliance.score(D = watchpro, Z = conditn, W = covmat) : 
  rgenoud package required to use genoud = TRUE option.
Calls: with -> with.default -> eval -> eval -> compliance.score
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: JADE
Error: package or namespace load failed for ‘JADE’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so: failed to map segment from shared object
Error: package ‘JADE’ could not be loaded
Execution halted
NB: .First.lib is obsolete and will not be used in R >= 3.0.0

idbg.interact: no visible global function definition for
  ‘capture.output’
idbg.interact: no visible global function definition for ‘timestamp’
idbg.print_breakpoints: no visible global function definition for
  ‘capture.output’
Undefined global functions or variables:
  capture.output timestamp
Consider adding
  importFrom("utils", "capture.output", "timestamp")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘idbr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IDCard’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Non-standard file/directory found at top level:
  ‘README.Idcoefs2b1.txt’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘identity’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/identity/libs/identity.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/identity/libs/identity.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IDE’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘ider-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: gendata
> ### Title: Data generator for intrinsic dimension estimation.
> ### Aliases: gendata
> 
> ### ** Examples
> 
> ## global intrinsic dimension estimate
> x <- gendata(DataName='SwissRoll')
> estmle <- lbmle(x=x,k1=3,k2=5)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FNN/libs/FNN.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FNN/libs/FNN.so: failed to map segment from shared object
Calls: lbmle ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: stats4
Loading required package: evd
Error: package or namespace load failed for ‘evd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/evd/libs/evd.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/evd/libs/evd.so: failed to map segment from shared object
Error: package ‘evd’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IDmining’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IDPmisc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
comp.uri: no visible global function definition for ‘quantile’
est.IDR: no visible global function definition for ‘ecdf’
get.pseudo.mix: no visible global function definition for ‘pnorm’
get.uri.2d: no visible global function definition for ‘smooth.spline’
get.uri.2d: no visible global function definition for ‘predict’
Undefined global functions or variables:
  ecdf pnorm predict quantile smooth.spline
Consider adding
  importFrom("stats", "ecdf", "pnorm", "predict", "quantile",
             "smooth.spline")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: doParallel
Loading required package: foreach
Loading required package: iterators
Loading required package: parallel
Error: package or namespace load failed for ‘IDSpatialStats’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ids’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/uuid/libs/uuid.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/uuid/libs/uuid.so: failed to map segment from shared object
Execution halted
Package suggested but not available for checking: ‘ie2miscdata’
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tcltk
Loading required package: data.table
Error: package or namespace load failed for ‘data.table’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Error: package ‘data.table’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘iECAT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MetaSKAT/libs/MetaSKAT.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MetaSKAT/libs/MetaSKAT.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ieeeround’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ieeeround/libs/ieeeround.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ieeeround/libs/ieeeround.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Mannings-n-examples-vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Package suggested but not available for checking: ‘financial’
Error in re-building vignettes:
  ...
Error: processing vignette ‘Analysis-using-tm-vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ifa’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ifctools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ifctools/libs/ifctools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ifctools/libs/ifctools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IFP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ifs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ifs/libs/ifs.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ifs/libs/ifs.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ifultools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/splus2R/libs/splus2R.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/splus2R/libs/splus2R.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IgorR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IGP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/PythonInR/libs/PythonInR.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/PythonInR/libs/PythonInR.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘igraphinshiny’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘igraph’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘iheatmapr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/S4Vectors/libs/S4Vectors.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/S4Vectors/libs/S4Vectors.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IHSEP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘iilasso’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IIS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ijtiff’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘iki.dataclim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: demography
Loading required package: forecast
Error: package or namespace load failed for ‘forecast’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘forecast’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘imageData’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: imager
Loading required package: magrittr
Error: package or namespace load failed for ‘imager’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘imager’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: magrittr
Error: package or namespace load failed for ‘imager’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘imaginator’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘imagine’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘imbalance’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘imdbapi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘iMediate’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IMFData’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘imfr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘imguR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/png/libs/png.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/png/libs/png.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IMIFA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘iml’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘immer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  IM4ECpp.cpp:24:54: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
  IM4ECpp.cpp:24:65: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
  IM4ECpp.cpp:33:54: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
  IM4ECpp.cpp:33:65: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
  ImmigrateCpp.cpp:25:62: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
  ImmigrateCpp.cpp:25:73: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
  ImmigrateCpp.cpp:35:62: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
  ImmigrateCpp.cpp:35:73: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
  imIM4ECpp.cpp:24:59: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
  imIM4ECpp.cpp:24:67: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
  imIM4ECpp.cpp:24:78: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
  imIM4ECpp.cpp:33:59: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
  imIM4ECpp.cpp:33:67: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
  imIM4ECpp.cpp:33:78: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/Immigrate.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Immigrate’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: Iso
Error: package or namespace load failed for ‘Iso’:
 .onLoad failed in loadNamespace() for ‘Iso’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Iso/libs/Iso.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Iso/libs/Iso.so: failed to map segment from shared object
Error: package ‘Iso’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: DBI
Loading required package: dplyr
Error: package or namespace load failed for ‘dplyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Error: package ‘dplyr’ could not be loaded
Execution halted
Running examples in ‘importar-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: import
> ### Title: This function imports/loads packages as in 'Python', i.e.,
> ###   "import package as alias"
> ### Aliases: import
> 
> ### ** Examples
> 
> import(dplyr, d)
Error: package or namespace load failed for ‘dplyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: xlsx
Error: package or namespace load failed for ‘xlsx’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Error: package ‘xlsx’ could not be loaded
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘import.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IMP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: inline
Loading required package: lpSolve
Error: package or namespace load failed for ‘lpSolve’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lpSolve/libs/lpSolve.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lpSolve/libs/lpSolve.so: failed to map segment from shared object
Error: package ‘lpSolve’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘imptree’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tmvtnorm
Loading required package: mvtnorm
Error: package or namespace load failed for ‘mvtnorm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Error: package ‘mvtnorm’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘imputeMDR’:
 .onLoad failed in loadNamespace() for ‘imputeMDR’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/imputeMDR/libs/imputeMDR.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/imputeMDR/libs/imputeMDR.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘imputeMissings’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForest/libs/randomForest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForest/libs/randomForest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘imputeMulti’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘imputePSF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘imputeR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘imputeTestbench’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘imputeTS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: png
Error: package or namespace load failed for ‘png’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/png/libs/png.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/png/libs/png.so: failed to map segment from shared object
Error: package ‘png’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘imsig’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tcltk
Loading required package: extRemes
Loading required package: Lmoments
Loading required package: distillery
Loading required package: car
Loading required package: carData
Error: package or namespace load failed for ‘car’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Error: package ‘car’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘inaparc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lhs/libs/lhs.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lhs/libs/lhs.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘inbreedR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘incadata’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/backports/libs/backports.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/backports/libs/backports.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘INCATome’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/S4Vectors/libs/S4Vectors.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/S4Vectors/libs/S4Vectors.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IncDTW’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘incgraph’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘incidence-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: as.data.frame.incidence
> ### Title: Conversion of incidence objects
> ### Aliases: as.data.frame.incidence as.incidence as.incidence.matrix
> ###   as.incidence.data.frame as.incidence.numeric
> 
> ### ** Examples
> 
> ## create fake data
> data <- c(0,1,1,2,1,3,4,5,5,5,5,4,4,26,6,7,9)
> sex <- sample(c("m","f"), length(data), replace=TRUE)
> 
> ## get incidence per group (sex)
> i <- incidence(data, groups = sex)
> i
<incidence object>
[17 cases from days 0 to 26]
[2 groups: f, m]

$counts: matrix with 27 rows and 2 columns
$n: 17 cases in total
$dates: 27 dates marking the left-side of bins
$interval: 1 day
$timespan: 27 days
$cumulative: FALSE

> plot(i)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: plot ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘conversions.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘incR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: incRplot
> ### Title: Quick visualisation of incubation temperatures, on-bouts and
> ###   off-bouts
> ### Aliases: incRplot
> 
> ### ** Examples
> 
> # loading example data
> data(incR_procdata)
> my_plot <- incRplot(data = incR_procdata[complete.cases(incR_procdata$temperature),], 
+                     time.var = "dec_time", 
+                     day.var = "date", 
+                     inc.temperature.var = "temperature", 
+                     env.temperature.var = "env_temp",
+                     vector.incubation = "incR_score")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: incRplot ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘incR_pipeline.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘inctools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IncucyteDRC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘indelmiss’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Package suggested but not available for checking: ‘rsprng’
Loading this package had a fatal error status code 1
Loading log:
Loading required package: xtable
Error: package or namespace load failed for ‘IndependenceTests’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/IndependenceTests/libs/IndependenceTests.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/IndependenceTests/libs/IndependenceTests.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘indexnumr.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘indirect-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: pdist
> ### Title: Helper function that gives the probability distribution function
> ###   for design point.
> ### Aliases: pdist
> 
> ### ** Examples
> 
> # design matrix: two scenarios
> X <- matrix(c(1, 1, 0, 1), nrow = 2) 
> rownames(X) <- c("scenario1", "scenario2")
> colnames(X) <- c("covariate1", "covariate2")
> #' # logit link
> # central credible intervals with probability = 1/2
> Z <- designLink(design = X, link = "logit", CI.prob = 0.5)
> #' # lower and upper quartiles and median
> Z <- indirect::elicitPt(Z, design.pt = 1, 
+   lower.CI.bound = 0.2,
+   median = 0.4,
+   upper.CI.bound = 0.6,
+   comment = "Completed.")
> indirect::plotDesignPoint(Z, design.pt = 1,   
+   elicited.fractiles = TRUE, theta.bounds = c(0, 1),
+   fitted.fractiles = TRUE, fitted.curve = TRUE)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: <Anonymous> ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...

Error: processing vignette ‘indirect.Rnw’ failed with diagnostics:
 chunk 4 (label = r) 
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Running examples in ‘INDperform-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: approx_deriv
> ### Title: Alternative method for confidence interval approximations of
> ###   derivatives
> ### Aliases: approx_deriv
> 
> ### ** Examples
> 
> # Using some models of the Baltic Sea demo data
> init_tbl <- ind_init_ex[ind_init_ex$id %in% c(5,9,75), ]
> mod_tbl <- merge_models_ex[merge_models_ex$id  %in% c(5,9,75), ]
> deriv_tbl <- approx_deriv(init_tbl, mod_tbl, ci_prop_se = 25)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: approx_deriv ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘inegiR’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘iNextPD’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘iNEXT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
IDM.bootCI: no visible global function definition for ‘cov’
IDM.bootCI: no visible global function definition for ‘cor’
IDM.bootCI: no visible global function definition for ‘quantile’
Undefined global functions or variables:
  cor cov quantile
Consider adding
  importFrom("stats", "cor", "cov", "quantile")
to your NAMESPACE file.
Rd file 'IDM.bootCI.Rd':
  \examples lines wider than 100 characters:
     #a built-in dataset fish is used. This data gives sizes of 53 female stickleback measured at the age of 17, 45, 80, and 115 days.
     #figure showing first two trajectories and percentages of variations accounted for by each trajectory.
     barplot(out$Percent.trajectory,ylim=c(0,105),las=1,names.arg=c("1","2","3","4"), ylab="Percentage of variation",cex.lab=1.35,cex.axis=1 ... [TRUNCATED]
     plot(age,out$Trajectories97.5CI[,1],type="l",lty=2,ylim=c(-1,1),las=1,ylab="Trajectory value",xlab="Age (days)",cex.lab=1.35,cex.axis=1 ... [TRUNCATED]
     plot(age,out$Trajectories97.5CI[,2],type="l",lty=2,ylim=c(-1,1),las=1,ylab="Trajectory value",xlab="Age (days)",cex.lab=1.35,cex.axis=1 ... [TRUNCATED]

Rd file 'p.function.Rd':
  \examples lines wider than 100 characters:
     temp2b=(-1)^i*factorial(j)/(factorial(i)*factorial(j-i))*factorial(2*j-2*i)/(factorial(j)*factorial(2*j-2*i-j))*x^(j-2*i)

These lines will be truncated in the PDF manual.
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘inferference_intro.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘infer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘inferr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
sh: 1: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/x13binary/bin/x13ashtml: Permission denied
Running examples in ‘Inflation-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: INFL.core_tf
> ### Title: Computes the triple filter core inflation
> ### Aliases: INFL.core_tf
> ### Keywords: core filter triple
> 
> ### ** Examples
> 
> ipca <- ipca_sub
> INFL.core_tf(subits.var=ipca$ipca_ts, weights = ipca$weights_ts)
sh: 1: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/x13binary/bin/x13ashtml: Permission denied
Warning in system(paste(x13.bin, file.path(tdir, "Testairline")), intern = TRUE) :
  running command '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/x13binary/bin/x13ashtml /tmp/RtmpxH8DrA/Testairline' had status 126
The binaries provided by 'x13binary' do not work on this
machine. To get more information, run:
  x13binary::checkX13binary()

You can set 'X13_PATH' manually if you intend to use your own
binaries. See ?seasonal for details.

No path to the binary executable of X-13 specified.

You can set 'X13_PATH' manually if you intend to use your own
binaries. See ?seasonal for details.

Error in checkX13(fail = TRUE, fullcheck = FALSE, htmlcheck = FALSE) : 
  Process terminated
Calls: INFL.core_tf -> <Anonymous> -> checkX13
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘influenceR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/influenceR/libs/influenceR.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/influenceR/libs/influenceR.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘influxdbr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘infoDecompuTE’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Information’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
BugReports field should be the URL of a single webpage
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘InformationValue’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: abind
Loading required package: relevent
Loading required package: trust
Loading required package: sna
Loading required package: statnet.common
Error: package or namespace load failed for ‘statnet.common’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘statnet.common’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘infotheo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/infotheo/libs/infotheo.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/infotheo/libs/infotheo.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘InfoTrad’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nloptr/libs/nloptr.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nloptr/libs/nloptr.so: failed to map segment from shared object
Execution halted
Running examples in ‘infraFDTD.assist-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: PrepFiles
> ### Title: Generate Input Files for infraFDTD
> ### Aliases: PrepFiles
> ### Keywords: IO file
> 
> ### ** Examples
> 
> ## generate the DEM
> data(volcano) # Maunga Whau (NZ) from built-in package "datasets"
> DEM = list(x = 10 * 1:87, y = 10 * 1:61, z = volcano)
> 
> ## choose the station locations
> sta = list(x = c(100, 500), y = c(100, 500))
> 
> ## show the topo map with stations
> image(DEM, col = terrain.colors(20))
> contour(DEM, add = TRUE)
> points(sta, pch = 25, bg = 1)
> 
> ## make the input files for infraFDTD, using the default homogeneous
> ## sound speed and density
> PrepFiles(X = DEM, sta = sta, dh = 10, fn_topo = 'topo.txt', fn_c =
+ 'c.txt', fn_rho = 'rho.txt', fn_sta = 'sta.txt')
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so: failed to map segment from shared object
Calls: PrepFiles ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
getInfra: no visible global function definition for ‘txtProgressBar’
getInfra: no visible global function definition for ‘download.file’
getInfra: no visible global function definition for ‘setTxtProgressBar’
getInfra : <anonymous>: no visible global function definition for
  ‘download.file’
Undefined global functions or variables:
  download.file setTxtProgressBar txtProgressBar
Consider adding
  importFrom("utils", "download.file", "setTxtProgressBar",
             "txtProgressBar")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Infusion’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geometry/libs/geometry.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geometry/libs/geometry.so: failed to map segment from shared object
Execution halted
Running ‘testthat.R’ [0s/0s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library (testthat);
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Running examples in ‘InjurySeverityScore-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: injury_score
> ### Title: Calculate injury severity score from ICD-9
> ### Aliases: injury_score
> 
> ### ** Examples
> 
> pat_id <- c(2,2,2,2,2,1,2,1,2,1,2,1,1,1,1,1,1,1,1,1,1,1,1,1)
> icd9 <- c('874.2', '874.8', '900.81', '900.82', '900.89', '805.06', 
+           'E966', '805.07', 'V14.0', '807.02', 'V70.4', '821.01', '823.20', 
+           '860.0', '861.01', '861.21', '861.22', '863.84', '864.04', '865.04', 
+           '865.09', '866.02', '868.04', '958.4')
> sample_data <- data.frame(subj = pat_id, code = icd9, stringsAsFactors = FALSE)
> injury_score(sample_data, subj, code)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: injury_score ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Found the following apparent S3 methods exported but not registered:
  combine.NULL print.allfun
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
Unavailable namespace imported from by a ':::' call: ‘Rcpp’
  See the note in ?`:::` about the use of this operator.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘inlmisc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘inpdfr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘inplace’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Packages in Depends field not imported from:
  ‘ExPosition’ ‘prettyGraphs’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Found the following apparent S3 methods exported but not registered:
  print.epCA.inference.battery print.epGPCA.inference.battery
  print.epMCA.inference.battery print.epPCA.inference.battery
  print.inpoBoot print.inpoBootTests print.inpoComponents
  print.inpoOmni print.inpoOutput
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘insect’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘insol’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/insol/libs/insol.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/insol/libs/insol.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘InspectChangepoint’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Running examples in ‘inspectr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: col_check
> ### Title: Check a single column for data fidelity.
> ### Aliases: col_check
> 
> ### ** Examples
> 
> col_check(colname = "ID_var", data = dataset, fun = numeric_check,
+ output = TRUE, stage = "1-Reasonableness")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: col_check ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘data-checks.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘INSPIRE’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/leaps/libs/leaps.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/leaps/libs/leaps.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: intamap
Loading required package: sp
Error: package or namespace load failed for ‘sp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘sp’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘intcensROC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IntClust’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Biobase/libs/Biobase.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Biobase/libs/Biobase.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: grid
Error: package or namespace load failed for ‘IntegratedJM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IntegratedMRF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Interact’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Interact/libs/Interact.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Interact/libs/Interact.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘interAdapt’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Interatrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Running examples in ‘intercure-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: inter_bch
> ### Title: Fits promotion time cure rate model for interval censored data
> ### Aliases: inter_bch
> 
> ### ** Examples
> 
> set.seed(3)
> sample_set <- sim_bch(80)
> 
> ## few iterations just to check how to use the function
> 
> inter_bch(sample_set, sample_set$L,
+ sample_set$R, c("xi1","xi2"), max_n = 5)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: inter_bch ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘intercure.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘interep’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘InterfaceqPCR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: compiler
Loading required package: gtools
Error: package or namespace load failed for ‘gtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Error: package ‘gtools’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘interflex’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: colorSpec
Error: package or namespace load failed for ‘colorSpec’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘colorSpec’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘intergraph’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/network/libs/network.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/network/libs/network.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘internetarchive’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Interpol: no visible global function definition for ‘splinefun’
Undefined global functions or variables:
  splinefun
Consider adding
  importFrom("stats", "splinefun")
to your NAMESPACE file.

Found the following calls to data() loading into the global environment:
File ‘Interpol/R/AAdescriptor.R’:
  data(AAindex)
See section ‘Good practice’ in ‘?data’.
prepare_Rd: AAdescriptor.Rd:25-27: Dropping empty section \details
prepare_Rd: AAdescriptor.Rd:39-41: Dropping empty section \note
prepare_Rd: AAdescriptor.Rd:45-47: Dropping empty section \seealso
prepare_Rd: AAindex.Rd:11-12: Dropping empty section \format
prepare_Rd: AAindex.Rd:1080-1081: Dropping empty section \source
prepare_Rd: AAindex.Rd:1085-1086: Dropping empty section \examples
prepare_Rd: Interpol.Rd:35-37: Dropping empty section \details
prepare_Rd: Interpol.Rd:47-49: Dropping empty section \note
prepare_Rd: Interpol.Rd:53-55: Dropping empty section \seealso
prepare_Rd: V3.Rd:11-12: Dropping empty section \format
prepare_Rd: V3.Rd:13-14: Dropping empty section \details
prepare_Rd: V3.Rd:15-16: Dropping empty section \source
prepare_Rd: V3.Rd:20-21: Dropping empty section \examples
Rd file 'Interpol.Rd':
  \examples lines wider than 100 characters:
             plot(unlist(b), type="l", col="darkgreen", ylim=c(-3,3), ylab="descriptor value", xlab="sequence position", lwd=2)
             lines(seq(1,length(unlist(b)),(length(unlist(b))/length(as.vector(c)))),as.vector(c), col="red", lwd=2)

These lines will be truncated in the PDF manual.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: date
Error: package or namespace load failed for ‘date’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/date/libs/date.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/date/libs/date.so: failed to map segment from shared object
Error: package ‘date’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘interp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘InterpretMSSpectrum’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rdisop/libs/Rdisop.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rdisop/libs/Rdisop.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘intervals’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/intervals/libs/intervals.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/intervals/libs/intervals.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IntervalSurgeon’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
interventionEffects: no visible binding for global variable ‘sd’
interventionEffects: no visible global function definition for ‘pt’
interventionEffects: no visible global function definition for ‘sd’
interventionalInference: no visible global function definition for ‘sd’
interventionalInferenceAdvanced: no visible global function definition
  for ‘sd’
linesROC: no visible global function definition for ‘segments’
plotMaxML: no visible global function definition for ‘plot’
plotMaxML: no visible global function definition for ‘segments’
Undefined global functions or variables:
  plot pt sd segments
Consider adding
  importFrom("graphics", "plot", "segments")
  importFrom("stats", "pt", "sd")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘inTrees’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: miscTools
Loading required package: maxLik
Error: package or namespace load failed for ‘maxLik’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘maxLik’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IntrinioStockAPI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: yaImpute
Error: package or namespace load failed for ‘yaImpute’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/yaImpute/libs/yaImpute.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/yaImpute/libs/yaImpute.so: failed to map segment from shared object
Error: package ‘yaImpute’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘intRvals’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘intsvy’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘intubate.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘inum’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘investr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘ionr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ind_excl
> ### Title: Wrapper and scripts for indicator exclusion procedure
> ### Aliases: ind_excl
> 
> ### ** Examples
> 
> ### Create a scale-outcome set that violates IOn_ Only 2 indicators out of 8
> ### relate to the outcome, the others just relate to the 2 indicators. This setting is
> ### similar to the N5: Impulsiveness - BMI association in Vainik et al (2015) EJP paper.
> set.seed(466)
> a<-scale_sim(n=2500, to_n=2, tn_n=6)
> # Last 2 indicators have considerably higher correlation with the outcome
> ind_excl(a[[1]], outcome=a[[2]], pcrit=0.0037)
Error: .onLoad failed in loadNamespace() for 'mnormt', details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so: failed to map segment from shared object
Execution halted
Running examples in ‘iopsych-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: paretoXY
> ### Title: Computes data needed for a XY Pareto plot.
> ### Aliases: paretoXY
> 
> ### ** Examples
> 
> data(dls2007)
> dat <- dls2007
> r_mat <- dat[1:6, 2:7]
> x_col <- 1:4 
> y_col <- 5:6
> d_vec <- dat[1:4, 1]
> 
> paretoXY(r_mat=r_mat, x_col=1:4, y_col=5, d_vec=d_vec, pred_lower=c(0,0,0,0))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mco/libs/mco.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mco/libs/mco.so: failed to map segment from shared object
Calls: paretoXY ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: filenamer
Error: package or namespace load failed for ‘io’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘iotables’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘iotools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/iotools/libs/iotools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/iotools/libs/iotools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IPCAPS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ipc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64url/libs/base64url.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64url/libs/base64url.so: failed to map segment from shared object
Execution halted
Non-standard file/directory found at top level:
  ‘beta’
Loading this package had a fatal error status code 1
Loading log:
Loading required package: gdistance
Loading required package: raster
Loading required package: sp
Error: package or namespace load failed for ‘sp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘sp’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IPEC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ipfp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ipfp/libs/ipfp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ipfp/libs/ipfp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ipft’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Non-standard file/directory found at top level:
  ‘version’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IPMRF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ipred’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘iprior’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘IPSUR.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IPtoCountry’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘iptools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ipumsr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ipwErrorY’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nleqslv/libs/nleqslv.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nleqslv/libs/nleqslv.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ipw’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: miscTools
Error: package or namespace load failed for ‘IQCC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Running ‘test-targetRunnerParallel.R’ [0s/0s]
  Running ‘testcapping.R’ [29s/16s]
  Running ‘testmisc.R’ [22s/11s]
  Running ‘testtargeval.R’ [1s/1s]
  Running ‘testthat.R’ [0s/0s]
  Running ‘testtime.R’ [2s/2s]
Running the tests in ‘tests/test-targetRunnerParallel.R’ failed.
Complete output:
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘irace-package.Rnw’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘iRafNet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IRATER’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IRdisplay’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘iRegression’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘iRF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: IRISSeismic
Error: package or namespace load failed for ‘IRISSeismic’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Error: package ‘IRISSeismic’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IRISSeismic’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IRkernel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IROmiss’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Running examples in ‘irrNA-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: iccNA
> ### Title: Intraclass correlation coefficients (ICCs) - generalized for
> ###   randomly incomplete datasets
> ### Aliases: iccNA
> 
> ### ** Examples
> 
> # Example 1:
> data(ConsistNA)
> # ConsistNA exhibits missing values, a perfect consistency, and 
> # a moderate agreement between raters:
> ConsistNA
        Rater1 Rater2 Rater3 Rater4 Rater5 Rater6
Object1      1      3      5     NA     NA     NA
Object2      2      4      6     NA     NA     NA
Object3      3      5      7     NA     NA     NA
Object4     NA     NA     NA      5      3      1
Object5     NA     NA     NA      6      4      2
Object6     NA     NA     NA      7      5      3
> # Common ICC-algorithms fail, since each row as well as each 
> # column of ConsistNA exhibits unfilled cells and these missing 
> # data are omitted column-wise or row-wise:
> library(irr)
Loading required package: lpSolve
Error: package or namespace load failed for ‘lpSolve’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lpSolve/libs/lpSolve.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lpSolve/libs/lpSolve.so: failed to map segment from shared object
Error: package ‘lpSolve’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘irtDemo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatial/libs/spatial.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatial/libs/spatial.so: failed to map segment from shared object
Execution halted
dendrify: no visible binding for global variable ‘item’
dendrify: no visible binding for global variable ‘node’
dendrify: no visible binding for global variable ‘value’
exogenize: no visible binding for global variable ‘item’
Undefined global functions or variables:
  item node value
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘irtreliability’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IRTShiny’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘isa2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ISAT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ISBF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ISBF/libs/ISBF.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ISBF/libs/ISBF.so: failed to map segment from shared object
Execution halted
residualplot: no visible global function definition for ‘predict’
residualplot: no visible global function definition for ‘rstandard’
residualplot: no visible global function definition for
  ‘complete.cases’
residualplot: no visible global function definition for ‘plot’
residualplot: no visible global function definition for ‘points’
residualplot: no visible global function definition for ‘lines’
residualplot: no visible global function definition for ‘smooth.spline’
residualplot: no visible global function definition for ‘sd’
residualplot: no visible global function definition for ‘rgb’
residualplot: no visible global function definition for ‘polygon’
Undefined global functions or variables:
  complete.cases lines plot points polygon predict rgb rstandard sd
  smooth.spline
Consider adding
  importFrom("grDevices", "rgb")
  importFrom("graphics", "lines", "plot", "points", "polygon")
  importFrom("stats", "complete.cases", "predict", "rstandard", "sd",
             "smooth.spline")
to your NAMESPACE file.
Running examples in ‘isdals-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: alligator
> ### Title: Alligator food preference
> ### Aliases: alligator
> ### Keywords: datasets
> 
> ### ** Examples
> 
> data(alligator)
> library(VGAM)
Loading required package: stats4
Loading required package: splines
Error: package or namespace load failed for ‘VGAM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/VGAM/libs/VGAM.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/VGAM/libs/VGAM.so: failed to map segment from shared object
Execution halted
'library' or 'require' call to ‘scatterplot3d’ which was already attached by Depends.
  Please remove these calls from your code.
Found the following apparent S3 methods exported but not registered:
  summary.interval
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
histInterval : buildHist: no visible global function definition for
  ‘hist’
intervalGraph3D: no visible global function definition for ‘par’
regInterval: no visible global function definition for ‘lm’
Undefined global functions or variables:
  hist lm par
Consider adding
  importFrom("graphics", "hist", "par")
  importFrom("stats", "lm")
to your NAMESPACE file.
Running examples in ‘isdparser-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: isd_parse
> ### Title: Parse NOAA ISD/ISH data files
> ### Aliases: isd_parse
> 
> ### ** Examples
> 
> path <- system.file('extdata/104270-99999-1928.gz', package = "isdparser")
> 
> (res <- isd_parse(path))
<path>/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/isdparser/extdata/104270-99999-1928.gz

Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Calls: isd_parse ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘isdparser_vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IsingFit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘isingLenzMC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/isingLenzMC/libs/isingLenzMC.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/isingLenzMC/libs/isingLenzMC.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘island’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/island/libs/island.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/island/libs/island.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘isni’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘isnullptr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/isnullptr/libs/isnullptr.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/isnullptr/libs/isnullptr.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: circular
Error: package or namespace load failed for ‘circular’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Error: package ‘circular’ could not be loaded
Execution halted
Running examples in ‘IsoplotR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: mds
> ### Title: Multidimensional Scaling
> ### Aliases: mds mds.default mds.detritals
> 
> ### ** Examples
> 
> data(examples)
> mds(examples$DZ,nnlines=TRUE,pch=21,cex=5)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: mds ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ISOpureR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Iso’:
 .onLoad failed in loadNamespace() for ‘Iso’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Iso/libs/Iso.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Iso/libs/Iso.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IsoriX’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘IsoSpecR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘isotone’:
 .onLoad failed in loadNamespace() for ‘nnls’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nnls/libs/nnls.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nnls/libs/nnls.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ISOweek’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘isqg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ISR3’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ISR3/libs/ISR3.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ISR3/libs/ISR3.so: failed to map segment from shared object
Execution halted
Running examples in ‘ISwR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: melanom
> ### Title: Survival after malignant melanoma
> ### Aliases: melanom
> ### Keywords: datasets
> 
> ### ** Examples
> 
> require(survival)
Loading required package: survival
Error: package or namespace load failed for ‘survival’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
> plot(survfit(Surv(days,status==1)~1,data=melanom))
Error in survfit(Surv(days, status == 1) ~ 1, data = melanom) : 
  could not find function "survfit"
Calls: plot
Execution halted
Depends: includes the non-default packages:
  'partitions', 'VGAM', 'MASS', 'ape', 'apTreeshape', 'geiger',
  'gtools'
Adding so many packages to the search path is excessive and importing
selectively is preferable.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘iterpc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gmp/libs/gmp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gmp/libs/gmp.so: failed to map segment from shared object
Execution halted
Non-standard file/directory found at top level:
  ‘Readme’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘itree’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/itree/libs/itree.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/itree/libs/itree.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ITRLearn’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/kernlab/libs/kernlab.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/kernlab/libs/kernlab.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ITRSelect’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Running examples in ‘itunesr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: getReviews
> ### Title: Extract Reviews from iTunes App Store
> ### Aliases: getReviews
> 
> ### ** Examples
> 
> getReviews(742044692,'in',1)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Calls: getReviews ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
ivFixed.formula: no visible global function definition for
  ‘model.matrix’
ivFixed.formula: no visible global function definition for
  ‘model.response’
summary.ivFixed: no visible global function definition for ‘coef’
summary.ivFixed: no visible global function definition for ‘pt’
Undefined global functions or variables:
  coef model.matrix model.response pt
Consider adding
  importFrom("stats", "coef", "model.matrix", "model.response", "pt")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: gmm
Loading required package: sandwich
Error: package or namespace load failed for ‘sandwich’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘sandwich’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ivmodel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
hausman: no visible global function definition for ‘pchisq’
ivbe: no visible global function definition for ‘cor’
ivbe: no visible global function definition for ‘pt’
ivfixed: no visible global function definition for ‘cor’
ivfixed: no visible global function definition for ‘pt’
ivpan.formula: no visible global function definition for ‘model.matrix’
ivpan.formula: no visible global function definition for
  ‘model.response’
ivrandom: no visible global function definition for ‘cor’
ivrandom: no visible global function definition for ‘pt’
summary.ivpan: no visible global function definition for ‘printCoefmat’
Undefined global functions or variables:
  cor model.matrix model.response pchisq printCoefmat pt
Consider adding
  importFrom("stats", "cor", "model.matrix", "model.response", "pchisq",
             "printCoefmat", "pt")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ivtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘iWISA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘jaatha-evolution.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jaccard’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jackstraw’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘JADE’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so: failed to map segment from shared object
Execution halted
boxplot.james: no visible global function definition for ‘mtext’
getBestSolutionValues.james : <anonymous>: no visible global function
  definition for ‘tail’
isMinimizing: no visible global function definition for ‘head’
isMinimizing: no visible global function definition for ‘tail’
mergeJAMES.james: no visible global function definition for ‘glob2rx’
plotConvergence.james : <anonymous> : <anonymous>: no visible global
  function definition for ‘tail’
plotConvergence.james: no visible global function definition for ‘tail’
plotConvergence.james: no visible global function definition for ‘head’
plotConvergence.james : <anonymous>: no visible global function
  definition for ‘tail’
plotConvergence.james: no visible global function definition for
  ‘matplot’
plotConvergence.james: no visible global function definition for
  ‘mtext’
summary.james: no visible global function definition for ‘sd’
summary.james: no visible global function definition for ‘median’
summary.james: no visible global function definition for ‘IQR’
Undefined global functions or variables:
  IQR glob2rx head matplot median mtext sd tail
Consider adding
  importFrom("graphics", "matplot", "mtext")
  importFrom("stats", "IQR", "median", "sd")
  importFrom("utils", "glob2rx", "head", "tail")
to your NAMESPACE file.
Running examples in ‘james.analysis-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: readJAMES
> ### Title: Read analysis results from JSON file
> ### Aliases: readJAMES
> 
> ### ** Examples
> 
> # get path to raw JSON file included in package distribution
> json.file <- system.file("extdata", "james.json", package = "james.analysis")
> 
> # read results from file
> james <- readJAMES(json.file)
Error: .onLoad failed in loadNamespace() for 'rjson', details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rjson/libs/rjson.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rjson/libs/rjson.so: failed to map segment from shared object
Execution halted
Running examples in ‘janeaustenr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: austen_books
> ### Title: Tidy data frame of Jane Austen's 6 completed, published novels
> ### Aliases: austen_books
> 
> ### ** Examples
> 
> 
> library(dplyr)
Error: package or namespace load failed for ‘dplyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Running examples in ‘janitor-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: adorn_ns
> ### Title: Add underlying Ns to a tabyl displaying percentages.
> ### Aliases: adorn_ns
> 
> ### ** Examples
> 
> 
> mtcars %>%
+   tabyl(am, cyl) %>%
+   adorn_percentages("col") %>%
+   adorn_pct_formatting() %>%
+   adorn_ns(position = "front")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: %>% ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘janitor.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jarbes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Non-standard files/directories found at top level:
  ‘getsp.class’ ‘getsp.java’ ‘version’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘JavaGD’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/JavaGD/libs/JavaGD.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/JavaGD/libs/JavaGD.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘JBTools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jcext’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jcolors’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Jdmbs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jdx’:
 .onLoad failed in loadNamespace() for ‘jdx’, details:
  call: NULL
  error: .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jetset’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: fPortfolio
Loading required package: timeDate
Loading required package: timeSeries
Loading required package: fBasics
Error: package or namespace load failed for ‘fBasics’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatial/libs/spatial.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatial/libs/spatial.so: failed to map segment from shared object
Error: package ‘fBasics’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: jiebaRD
Error: package or namespace load failed for ‘jiebaR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jipApprox’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘JMcmprsk’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jmcm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jmdem’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/VGAM/libs/VGAM.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/VGAM/libs/VGAM.so: failed to map segment from shared object
Execution halted
powerLongSurv: no visible global function definition for ‘qnorm’
powerLongSurv: no visible global function definition for ‘pnorm’
Undefined global functions or variables:
  pnorm qnorm
Consider adding
  importFrom("stats", "pnorm", "qnorm")
to your NAMESPACE file.
Running examples in ‘jmdl-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: getJMDL
> ### Title: Extract or Get Generalized Components from a Fitted Joint Mean
> ###   Correlation Model
> ### Aliases: getJMDL getJMDL.jmdlMod
> 
> ### ** Examples
> 
> 
> mydat <- toydata
> fit <- jmdl(Y|id|time ~ X, data = mydat, q = 2, family ='Bernoulli')
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: jmdl ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘JMI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
JBTest: no visible global function definition for ‘pchisq’
generateSignificance: no visible global function definition for ‘pnorm’
packages: no visible global function definition for ‘install.packages’
shift: no visible global function definition for ‘tail’
shift: no visible global function definition for ‘head’
splitBy: no visible global function definition for ‘head’
Undefined global functions or variables:
  head install.packages pchisq pnorm tail
Consider adding
  importFrom("stats", "pchisq", "pnorm")
  importFrom("utils", "head", "install.packages", "tail")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jmvconnect’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jmvcore’:
 .onLoad failed in loadNamespace() for ‘rjson’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rjson/libs/rjson.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rjson/libs/rjson.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jmv’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jocre’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KernSmooth/libs/KernSmooth.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KernSmooth/libs/KernSmooth.so: failed to map segment from shared object
Execution halted
RE.ADT: no visible global function definition for ‘sd’
RE.ADT: no visible global function definition for ‘pnorm’
RE.Johnson: no visible global function definition for ‘pnorm’
Undefined global functions or variables:
  pnorm sd
Consider adding
  importFrom("stats", "pnorm", "sd")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jointDiag’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jointDiag/libs/jointDiag.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jointDiag/libs/jointDiag.so: failed to map segment from shared object
Execution halted
binteg: no visible global function definition for ‘contourLines’
binteg: no visible global function definition for ‘approx’
binteg: no visible global function definition for ‘par’
plot1: no visible global function definition for ‘plot’
plot1: no visible global function definition for ‘par’
plot1: no visible global function definition for ‘rect’
plot1: no visible global function definition for ‘axis’
plot1: no visible global function definition for ‘contour’
plot1: no visible global function definition for ‘contourLines’
plot1: no visible binding for global variable ‘approx’
plot1: no visible global function definition for ‘lines’
plot1: no visible global function definition for ‘text’
plot2: no visible global function definition for ‘plot’
plot2: no visible global function definition for ‘abline’
plot2: no visible global function definition for ‘lines’
plot2: no visible global function definition for ‘legend’
Undefined global functions or variables:
  abline approx axis contour contourLines legend lines par plot rect
  text
Consider adding
  importFrom("grDevices", "contourLines")
  importFrom("graphics", "abline", "axis", "contour", "legend", "lines",
             "par", "plot", "rect", "text")
  importFrom("stats", "approx")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jointseg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/matrixStats/libs/matrixStats.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/matrixStats/libs/matrixStats.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘joinXL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  jomo1clmmC.c:105:3: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  jomo1clmmhrC.c:107:3: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  jomo2clmmC.c:128:3: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  jomo2clmmhrC.c:132:3: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  jomooprobitC.c:84:3: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/jomo.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jomo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: openssl
Error: package or namespace load failed for ‘openssl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/openssl/libs/openssl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/openssl/libs/openssl.so: failed to map segment from shared object
Error: package ‘openssl’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘JOUSBoost’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jpeg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jpeg/libs/jpeg.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jpeg/libs/jpeg.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jpmesh’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: jpmesh
Error: package or namespace load failed for ‘jpmesh’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Error: package ‘jpmesh’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jqr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lazyeval/libs/lazyeval.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lazyeval/libs/lazyeval.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘JRF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/JRF/libs/JRF.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/JRF/libs/JRF.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘jrvFinance-demo.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jsonify’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jsonld’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jsonlite’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jsonstat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jsonvalidate’:
 .onLoad failed in loadNamespace() for ‘jsonvalidate’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jsr223’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘js’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jstor’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jsTree’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jtGWAS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
qtls: no visible global function definition for ‘quantile’
qtls: no visible global function definition for ‘pnorm’
Undefined global functions or variables:
  pnorm quantile
Consider adding
  importFrom("stats", "pnorm", "quantile")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jubilee’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: magrittr
Error: package or namespace load failed for ‘jug’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘JuliaCall’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘junctions’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: pbdZMQ
Error: package or namespace load failed for ‘pbdZMQ’:
 .onLoad failed in loadNamespace() for ‘pbdZMQ’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/pbdZMQ/libs/pbdZMQ.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/pbdZMQ/libs/pbdZMQ.so: failed to map segment from shared object
Error: package ‘pbdZMQ’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘junr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘jwutil’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘kableExtra’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘kamila’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KernSmooth/libs/KernSmooth.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KernSmooth/libs/KernSmooth.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘kangar00’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/CompQuadForm/libs/CompQuadForm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/CompQuadForm/libs/CompQuadForm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘kantorovich’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: affy
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: ‘BiocGenerics’

The following objects are masked from ‘package:parallel’:

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from ‘package:stats’:

    IQR, mad, sd, var, xtabs

The following objects are masked from ‘package:base’:

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, basename, cbind, colMeans, colSums, colnames,
    dirname, do.call, duplicated, eval, evalq, get, grep, grepl,
    intersect, is.unsorted, lapply, mapply, match, mget, order, paste,
    pmax, pmax.int, pmin, pmin.int, rank, rbind, rowMeans, rowSums,
    rownames, sapply, setdiff, sort, table, tapply, union, unique,
    unsplit, which, which.max, which.min

Loading required package: Biobase
Error: package or namespace load failed for ‘Biobase’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Biobase/libs/Biobase.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Biobase/libs/Biobase.so: failed to map segment from shared object
Error: package ‘Biobase’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: PresenceAbsence
Loading required package: maptools
Loading required package: sp
Error: package or namespace load failed for ‘sp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘sp’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tuneR
Error: package or namespace load failed for ‘tuneR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘tuneR’ could not be loaded
Execution halted
Running examples in ‘KarsTS-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: myLinModel
> ### Title: myLinModel: performs a linear fit
> ### Aliases: myLinModel
> ### Keywords: ~kwd1 ~kwd2
> 
> ### ** Examples
> 
> 
> observed <- genTSExample(stationary = FALSE, InKTSEnv = FALSE)$value
> predicted <- observed + stats::rnorm(stats::rnorm(length(observed)))
> myLinModel(observed, predicted)
Warning: loading Rplot failed
Error in structure(.External(.C_dotTcl, ...), class = "tclObj") : 
  [tcl] image type "Rplot" doesn't exist.
Calls: myLinModel -> <Anonymous> -> .Tcl -> structure
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: pbdMPI
Error: package or namespace load failed for ‘pbdMPI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlecuyer/libs/rlecuyer.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlecuyer/libs/rlecuyer.so: failed to map segment from shared object
Error: package ‘pbdMPI’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘kde1d’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘kdecopula’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘kdensity-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: kdensity
> ### Title: Parametrically guided kernel density estimation
> ### Aliases: kdensity
> 
> ### ** Examples
> 
> ## Use gamma kernels to model positive data, the concentration of
> ## theophylline
> 
> concentration = Theoph$conc + 0.001
> plot(kdensity(concentration, start = "gamma", kernel = "gamma", adjust = 1/3),
+      ylim = c(0, 0.15), lwd = 2, main = "Concentration of theophylline")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: plot ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘kdetrees’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘kdevine’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KernSmooth/libs/KernSmooth.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KernSmooth/libs/KernSmooth.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘kdtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘kehra’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘kelvin’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Bessel/libs/Bessel.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Bessel/libs/Bessel.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘kendallRandomWalks’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Kendall’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Kendall/libs/Kendall.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Kendall/libs/Kendall.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: keras
Error: package or namespace load failed for ‘keras’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘keras’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘keras’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘kerasR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Malformed Title field: should not end in a period.
Checking should be performed on sources prepared by ‘R CMD build’.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘KERE’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KERE/libs/KERE.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KERE/libs/KERE.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘kernDeepStackNet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘kerndwd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/kerndwd/libs/kerndwd.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/kerndwd/libs/kerndwd.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘kernelboot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘kernelFactory’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForest/libs/randomForest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForest/libs/randomForest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘KernelKnn’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘kernlab’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/kernlab/libs/kernlab.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/kernlab/libs/kernlab.so: failed to map segment from shared object
Execution halted
Running examples in ‘kernplus-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: kp.pwcurv
> ### Title: Predict Wind Power Output by Using a Multivariate Power Curve
> ### Aliases: kp.pwcurv
> 
> ### ** Examples
> 
> head(windpw)
      V      D      rho          I         Sb      y
1  6.95 173.60 1.159438 0.14244604 0.08469058  40.42
2  5.60  24.72 1.258566 0.08571429 0.06847489  14.44
3  9.17 270.60 1.177190 0.10359869 0.40546263  64.02
4 10.41 171.50 1.141209 0.07780980 0.46597980  77.96
5 17.11  48.11 1.230691 0.08065459 0.14205708 101.41
6  9.85 294.10 1.242199 0.07817259 0.15405456  73.07
> 
> 
> ### Power curve estimation.
> 
> # By using a single input of wind speed.
> pwcurv.est <- kp.pwcurv(windpw$y, windpw$V)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KernSmooth/libs/KernSmooth.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KernSmooth/libs/KernSmooth.so: failed to map segment from shared object
Calls: kp.pwcurv ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘kernscr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  CV.cpp:67:8: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
  CV.cpp:73:8: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
  smoother3.cpp:108:4: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
  smoother3.cpp:120:4: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/KernSmoothIRT.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘KernSmoothIRT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘KernSmooth’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KernSmooth/libs/KernSmooth.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KernSmooth/libs/KernSmooth.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: SparseM
Error: package or namespace load failed for ‘SparseM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SparseM/libs/SparseM.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SparseM/libs/SparseM.so: failed to map segment from shared object
Error: package ‘SparseM’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘keyholder’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Running examples in ‘keyplayer-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: fragment
> ### Title: Compute the Fragmentation Centrality Score in a Netwrok
> ### Aliases: fragment
> 
> ### ** Examples
> 
> # Create a 5x5 weighted and directed adjacency matrix, where edge values
> # represent the strength of tie
> W <- matrix(
+   c(0,1,3,0,0,
+     0,0,0,4,0,
+     1,1,0,2,0,
+     0,0,0,0,3,
+     0,2,0,0,0),
+     nrow=5, ncol=5, byrow = TRUE)
> 
> # Transform the edge value to distance interpretaion
> A <- W
> A[W!=0] <- 1/W[W!=0]
> 
> # List the fragmentation centrality scores for every node
> fragment(A)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Calls: fragment ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘keypress’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/keypress/libs/keypress.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/keypress/libs/keypress.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘keyring’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/keyring/libs/keyring.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/keyring/libs/keyring.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Avoiding_plain_text_passwords_in_R_with_keyringr.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘KFAS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KFAS/libs/KFAS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KFAS/libs/KFAS.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘introduction.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘KFKSDS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KFKSDS/libs/KFKSDS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KFKSDS/libs/KFKSDS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘KGode’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘kgschart’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nnet/libs/nnet.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nnet/libs/nnet.so: failed to map segment from shared object
Execution halted
Running examples in ‘khroma-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: colour
> ### Title: Colour palette
> ### Aliases: colour color
> 
> ### ** Examples
> 
> library("scales")
Error: package or namespace load failed for ‘scales’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘ktx.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘kimisc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘kineticF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘kirby21.base’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/git2r/libs/git2r.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/git2r/libs/git2r.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘kirby21.fmri’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/git2r/libs/git2r.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/git2r/libs/git2r.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘kirby21.t1’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/git2r/libs/git2r.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/git2r/libs/git2r.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘kitagawa’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Bessel/libs/Bessel.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Bessel/libs/Bessel.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘kknn’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted