Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PSF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘psica’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/nnet/libs/nnet.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/nnet/libs/nnet.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘psidR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PSLM2015’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PSM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pspearman’:
 .onLoad failed in loadNamespace() for ‘pspearman’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pspearman/libs/pspearman.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pspearman/libs/pspearman.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pspline’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pspline/libs/pspline.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pspline/libs/pspline.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PSPManalysis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/PSPManalysis/libs/PSPManalysis.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/PSPManalysis/libs/PSPManalysis.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ps’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/ps/libs/ps.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/ps/libs/ps.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pssmooth’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pssm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pstest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PSTR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PSW’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘psychmeta’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: multilevel
Loading required package: nlme
Error: package or namespace load failed for ‘nlme’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘nlme’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: flexmix
Loading required package: lattice
Error: package or namespace load failed for ‘lattice’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘lattice’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘psycho’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘psychotools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/psychotools/libs/psychotools.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/psychotools/libs/psychotools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘psych’:
 .onLoad failed in loadNamespace() for ‘mnormt’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mnormt/libs/mnormt.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mnormt/libs/mnormt.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘psychReport’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PsyControl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘illustrationBONDS.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘psyosphere-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: about common mistakes
> ### Title: Tips to prevent common mistakes
> ### Aliases: about_common_mistakes
> 
> ### ** Examples
> 
> # Example forgetting to use weighted statistics --------------------------------
> data(psyo)
> tracks <- t_speed(psyo)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: t_speed ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Running examples in ‘psyphy-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: SS.RGBcalib
> ### Title: Self-Start Functions for Fitting Luminance vs Grey Level
> ###   Relation on CRT displays
> ### Aliases: SS.RGBcalib SS.calib
> ### Keywords: models nonlinear
> 
> ### ** Examples
> 
> 
> data(RGB)
> 
> #Fitting a single gun
> W.nls <- nls(Lum ~ SS.calib(Blev, k, gamm, GL), data = RGB,
+ 				subset = (Gun == "W"))
> summary(W.nls)

Formula: Lum ~ SS.calib(Blev, k, gamm, GL)

Parameters:
      Estimate Std. Error t value Pr(>|t|)    
Blev   2.64749    0.62011   4.269 0.000461 ***
k    501.51865    1.01610 493.573  < 2e-16 ***
gamm   2.29796    0.01109 207.289  < 2e-16 ***
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1

Residual standard error: 1.43 on 18 degrees of freedom

Number of iterations to convergence: 3 
Achieved convergence tolerance: 5.47e-06

> 
> #curvature (parameter effect) is greater when GL is 0:255
> Wc.nls <- nls(Lum ~ SS.calib(Blev, k, gamm, GL*255), data = RGB,
+ 				subset = (Gun == "W"))
> MASS::rms.curv(W.nls)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: :: ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PTE’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pterrace’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ptest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: misc3d
Error: package or namespace load failed for ‘ptinpoly’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/ptinpoly/libs/ptinpoly.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/ptinpoly/libs/ptinpoly.so: failed to map segment from shared object
Execution halted
Running examples in ‘ptstem-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ptstem_words
> ### Title: Stem Words
> ### Aliases: ptstem ptstem_words
> 
> ### ** Examples
> 
> words <- c("balões", "aviões", "avião", "gostou", "gosto", "gostaram")
> ptstem_words(words, "hunspell")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: ptstem_words ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘ptstem.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ptw’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/nloptr/libs/nloptr.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/nloptr/libs/nloptr.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PTXQC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ptycho’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘pubchunks-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: pub_chunks
> ### Title: Extract chunks of data from articles
> ### Aliases: pub_chunks
> 
> ### ** Examples
> 
> # a file path to an XML file
> x <- system.file("examples/elsevier_1.xml", package = "pubchunks")
> pub_chunks(x, "title")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: pub_chunks ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pubmed.mineR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PubMedWordcloud’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PUlasso’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pulsar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘puniform’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running ‘purged.filesizes.R’ [0s/0s]
  Running ‘testthat.R’ [0s/0s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘purrrlyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘purrr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: dcmle
Loading required package: dclone
Loading required package: coda
Error: package or namespace load failed for ‘coda’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘coda’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pvar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pvclass’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PVR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pvsR’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PWD’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PWEALL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pwrFDR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pwrFDR/libs/pwrFDR.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pwrFDR/libs/pwrFDR.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘pwr-vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: httr
Loading required package: rjstat
Error: package or namespace load failed for ‘rjstat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/checkmate/libs/checkmate.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/checkmate/libs/checkmate.so: failed to map segment from shared object
Error: package ‘rjstat’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pxweb’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RJSONIO/libs/RJSONIO.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RJSONIO/libs/RJSONIO.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pyinit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/robustbase/libs/robustbase.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/robustbase/libs/robustbase.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘pysd2r.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PythonInR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/PythonInR/libs/PythonInR.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/PythonInR/libs/PythonInR.so: failed to map segment from shared object
Execution halted
Running examples in ‘pzfx-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: pzfx_tables
> ### Title: List all tables in a 'GraphPad Prism' '.pzfx' file.
> ### Aliases: pzfx_tables
> 
> ### ** Examples
> 
> pzfx_file <- system.file("extdata/exponential_decay.pzfx", package = "pzfx", mustWork = TRUE)
> pzfx_tables(pzfx_file)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: pzfx_tables ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘pzfx.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/qap/libs/qap.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/qap/libs/qap.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/ncdf4/libs/ncdf4.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/ncdf4/libs/ncdf4.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘QCApro’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lpSolve/libs/lpSolve.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lpSolve/libs/lpSolve.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘QCA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘QCAtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qcc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qccrs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qcQpcr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: qcc
Error: package or namespace load failed for ‘qcc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘qcc’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘QCSimulator’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: qdapDictionaries
Loading required package: qdapRegex
Loading required package: qdapTools
Error: package or namespace load failed for ‘qdapTools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Error: package ‘qdapTools’ could not be loaded
Execution halted
Running examples in ‘qdapRegex-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: S
> ### Title: Use C-style String Formatting Commands
> ### Aliases: S
> 
> ### ** Examples
> 
> S("@after_", "the", "the")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: S ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qdapTools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Running examples in ‘QFASA-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: p.QFASA
> ### Title: Computes the diet estimate for each predator in seal.mat using
> ###   either the Kullback-Leibler Distance (KL), the Aitchison Distance
> ###   (AIT) or the Chi-Square Distance (CS).
> ### Aliases: p.QFASA
> 
> ### ** Examples
> 
>  ## Fatty Acids
>  data(FAset)
>  fa.set = as.vector(unlist(FAset))
>  
>  ## Predators
>  data(predatorFAs)
>  tombstone.info = predatorFAs[,1:4]
>  predator.matrix = predatorFAs[,5:(ncol(predatorFAs))]
>  npredators = nrow(predator.matrix)
> 
>  ## Prey
>  data(preyFAs)
>  prey.sub=(preyFAs[,4:(ncol(preyFAs))])[fa.set]
>  prey.sub=prey.sub/apply(prey.sub,1,sum) 
>  group=as.vector(preyFAs$Species)
>  prey.matrix=cbind(group,prey.sub)
>  prey.matrix=MEANmeth(prey.matrix) 
> 
>  FC = preyFAs[,c(2,3)] 
>  FC = as.vector(tapply(FC$lipid,FC$Species,mean,na.rm=TRUE))
> 
>  ## Calibration Coefficients
>  data(CC)
>  cal.vec = CC[,2]
>  cal.mat = replicate(npredators, cal.vec)
> 
>  # Run QFASA
>  Q = p.QFASA(predator.matrix,
+              prey.matrix,
+              cal.mat,
+              dist.meas=1, 
+              gamma=1,
+              FC,
+              start.val = rep(1,nrow(prey.matrix)),
+              fa.set)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/truncnorm/libs/truncnorm.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/truncnorm/libs/truncnorm.so: failed to map segment from shared object
Calls: p.QFASA ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Running examples in ‘qfasar-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: cc_aug
> ### Title: Calibration coefficient for an augmented signature proportion
> ### Aliases: cc_aug
> 
> ### ** Examples
> 
> cc_aug(sig_rep = matrix(c(0.05, 0.10, 0.30, 0.55,
+                           0.04, 0.11, 0.29, 0.56,
+                           0.10, 0.05, 0.35, 0.50), ncol = 3),
+        sig_scale = matrix(c(0.40, 0.50, 0.10,
+                             0.45, 0.49, 0.06,
+                             0.35, 0.45, 0.20), ncol = 3),
+        cc_all = c(0.75, 1.05, 1.86, 0.80),
+        use_fa = c(FALSE, FALSE, TRUE, TRUE))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/truncnorm/libs/truncnorm.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/truncnorm/libs/truncnorm.so: failed to map segment from shared object
Calls: cc_aug ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘qfasar.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qGaussian’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘QGglmm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qgraph’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘QICD’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/QICD/libs/QICD.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/QICD/libs/QICD.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qicharts2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qicharts’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qiimer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘qiitr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: qiita_util
> ### Title: Generate Payload And Tag For Qiita API
> ### Aliases: qiita_util qiita_util_payload qiita_util_tag
> 
> ### ** Examples
> 
> qiita_util_tag(name = "R", versions = ">3.1")
$name
[1] "R"

$versions
[1] ">3.1"

attr(,"class")
[1] "qiita_tag" "list"     
> 
> qiita_util_payload(body = "foo",
+                    title = "test",
+                    tags = list(
+                      qiita_util_tag(name = "R", versions = ">3.1"),
+                      qiita_util_tag(name = "dplyr")
+                    ),
+                    private = TRUE)
Warning in structure(x, class = unique(c("AsIs", oldClass(x)))) :
  Calling 'structure(NULL, *)' is deprecated, as NULL cannot have attributes.
  Consider 'structure(list(), *)' instead.
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Calls: qiita_util_payload ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qkerntool’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/class/libs/class.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/class/libs/class.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qlcData’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qlcVisualize’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: parallel
Error: package or namespace load failed for ‘qle’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qmethod’:
 .onLoad failed in loadNamespace() for ‘mnormt’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mnormt/libs/mnormt.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mnormt/libs/mnormt.so: failed to map segment from shared object
Execution halted
Running examples in ‘qoma.smuggler-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: List-class
> ### Title: Mutable list
> ### Aliases: List-class List
> 
> ### ** Examples
> 
> # set FAME monthly date range January 2018 to December 2018
> rng <- to_fame_range(rhli::HMONTH,"18m1","18m12")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rhli/libs/rhli.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rhli/libs/rhli.so: failed to map segment from shared object
Calls: to_fame_range ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: quantspec
Loading required package: stats4
Error: package or namespace load failed for ‘quantspec’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘quantspec’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘QPot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/QPot/libs/QPot.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/QPot/libs/QPot.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘qqman.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Running examples in ‘qqtest-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: qkay
> ### Title: 'qkay' The K distribution quantile function
> ### Aliases: qkay
> 
> ### ** Examples
> 
> 
> p <- ppoints(30)
> # Get the quantiles for these points
> q5 <- qkay(p, 5)
> plot(p, q5, main="Quantile plot of K(20)", ylim=c(0,max(q5)))
> # Add quantiles from another K
> points(p, qkay(p, 20), pch=19)
> 
> # 
> # Do these EXACT quantiles from a K(5) look like they might  
> # have been generated from K(20)?
> qqtest(q5, dist="kay",df=20)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: qqtest ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘QRAGadget’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qrage’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘QRank’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘qrcode-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: qrcode_gen
> ### Title: QRcode generator
> ### Aliases: qrcode_gen
> 
> ### ** Examples
> 
> qrcode_gen('www.r-project.org')
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: qrcode_gen ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qrLMM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qrmdata’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qrmix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qrmtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qrng’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/qrng/libs/qrng.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/qrng/libs/qrng.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qrNLMM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qrsvm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qsort’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qsub’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qtbase’:
 .onLoad failed in loadNamespace() for ‘qtbase’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/qtbase/libs/qtbase.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/qtbase/libs/qtbase.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qte’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qtlcharts’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/qtl/libs/qtl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/qtl/libs/qtl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tiff
Error: package or namespace load failed for ‘tiff’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/tiff/libs/tiff.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/tiff/libs/tiff.so: failed to map segment from shared object
Error: package ‘tiff’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qtlmt’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/qtlmt/libs/qtlmt.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/qtlmt/libs/qtlmt.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qtl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/qtl/libs/qtl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/qtl/libs/qtl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘QTLRel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Qtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: qtbase
Error: package or namespace load failed for ‘qtbase’:
 .onLoad failed in loadNamespace() for ‘qtbase’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/qtbase/libs/qtbase.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/qtbase/libs/qtbase.so: failed to map segment from shared object
Error: package ‘qtbase’ could not be loaded
Execution halted
Running examples in ‘quadmatrix-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: quadmatrix
> ### Title: Solving Quadratic Matrix Equations
> ### Aliases: quadmatrix
> 
> ### ** Examples
> 
> B = matrix(c(1,3,3,1),nrow = 2,ncol = 2)
> A = matrix(c(1.5,2,2,1.5),nrow = 2,ncol = 2)
> C = matrix(c(1.5,1,1,1.5),nrow = 2,ncol = 2)
> quadmatrix(A,B,C)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/geigen/libs/geigen.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/geigen/libs/geigen.so: failed to map segment from shared object
Calls: quadmatrix ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘quadmesh’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/png/libs/png.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/png/libs/png.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘quadprog’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Execution halted
Running examples in ‘quadprogXT-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: solveQPXT
> ### Title: Solve a quadratic program with absolute values in constraints &
> ###   objective
> ### Aliases: solveQPXT buildQP
> 
> ### ** Examples
> 
> ##quadprog example"
> Dmat       <- matrix(0,3,3)
> diag(Dmat) <- 1
> dvec       <- c(0,5,0)
> Amat       <- matrix(c(-4,-3,0,2,1,0,0,-2,1),3,3)
> bvec       <- c(-8,2,0)
> qp <- quadprog::solve.QP(Dmat,dvec,Amat,bvec=bvec)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Calls: :: ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘quad’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/PearsonDS/libs/PearsonDS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/PearsonDS/libs/PearsonDS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qualmap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qualpalr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘quantable’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/class/libs/class.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/class/libs/class.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘quanteda’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: units
Error: package or namespace load failed for ‘units’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘units’ could not be loaded
Execution halted
Running examples in ‘QuantNorm-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: QuantNorm
> ### Title: Adjust the distance matrix by quantile normalization for data
> ###   with batch effect
> ### Aliases: QuantNorm
> 
> ### ** Examples
> 
> 
> library(pheatmap) #drawing heatmap
Error: package or namespace load failed for ‘pheatmap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘quantoptr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘quantregRanger’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: stats4
Error: package or namespace load failed for ‘quantspec’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: compiler
Loading required package: foreach
Error: package or namespace load failed for ‘QuantumClone’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/DEoptim/libs/DEoptim.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/DEoptim/libs/DEoptim.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘QuasiSeq’:
 .onLoad failed in loadNamespace() for ‘limma’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/limma/libs/limma.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/limma/libs/limma.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘questionr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘queuecomputer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘quhomology-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: degenerate_homology
> ### Title: Calculates the degenerate Homology for a rack/birack.
> ### Aliases: degenerate_homology
> 
> ### ** Examples
> 
> degenerate_homology(3,3)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: degenerate_homology ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: distances
Error: package or namespace load failed for ‘distances’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/distances/libs/distances.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/distances/libs/distances.so: failed to map segment from shared object
Error: package ‘distances’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘quickmapr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘quickPlot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘quickReg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘QUIC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/QUIC/libs/QUIC.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/QUIC/libs/QUIC.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘quokar’:
 .onLoad failed in loadNamespace() for ‘mnormt’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mnormt/libs/mnormt.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mnormt/libs/mnormt.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘quotedargs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quotedargs/libs/quotedargs.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quotedargs/libs/quotedargs.so: failed to map segment from shared object
Execution halted
Running examples in ‘qvcalc-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot.qv
> ### Title: Plot method for objects of class qv
> ### Aliases: plot.qv
> ### Keywords: models hplot
> 
> ### ** Examples
> 
> ##  Overdispersed Poisson loglinear model for ship damage data
> ##  from McCullagh and Nelder (1989), Sec 6.3.2 
> library(MASS)
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qwraps2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘R2admb’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: BayesXsrc
Loading required package: colorspace
Error: package or namespace load failed for ‘colorspace’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/colorspace/libs/colorspace.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/colorspace/libs/colorspace.so: failed to map segment from shared object
Error: package ‘colorspace’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘r2d2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/KernSmooth/libs/KernSmooth.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/KernSmooth/libs/KernSmooth.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘r2d3’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘R2DGC.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘R2DT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Running examples in ‘r2glmm-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: calc_sgv
> ### Title: Compute the standardized generalized variance (SGV) of a blocked
> ###   diagonal matrix.
> ### Aliases: calc_sgv
> 
> ### ** Examples
> 
> library(Matrix)
Error: package or namespace load failed for ‘Matrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘R2OpenBUGS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: proto
Loading required package: Matrix
Error: package or namespace load failed for ‘Matrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘Matrix’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘R2SWF’:
 .onLoad failed in loadNamespace() for ‘sysfonts’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sysfonts/libs/sysfonts.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sysfonts/libs/sysfonts.so: failed to map segment from shared object
Execution halted
Running examples in ‘R2ucare-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: marray
> ### Title: m-array: table of first recaptures
> ### Aliases: marray
> ### Keywords: package
> 
> ### ** Examples
> 
> # read in the classical dipper dataset
> dipper = system.file("extdata", "ed.inp", package = "R2ucare")
> dipper = read_inp(dipper,group.df=data.frame(sex=c('Male','Female')))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Calls: read_inp ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘vignette_R2ucare.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: s20x
Loading required package: leaps
Error: package or namespace load failed for ‘leaps’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/leaps/libs/leaps.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/leaps/libs/leaps.so: failed to map segment from shared object
Error: package ‘leaps’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘R3port’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  R4dfp-object.c:253:3: warning: ‘strncpy’ output truncated before terminating nul copying 9 bytes from a string of the same length [-Wstringop-truncation]
  R4dfp-object.c:260:3: warning: ‘strncpy’ output truncated before terminating nul copying 9 bytes from a string of the same length [-Wstringop-truncation]
See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/R4dfp.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘R4dfp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/R4dfp/libs/R4dfp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/R4dfp/libs/R4dfp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘r4lineups’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘r4ss’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘r511’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Running examples in ‘r6extended-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: r6extended
> ### Title: extended R6 class
> ### Aliases: r6extended
> ### Keywords: data
> 
> ### ** Examples
> 
> 
> # make new
> ext <- r6extended$new()
> 
> # what is there?
> ext$ls()
       name   where    class
1      hash private function
2    hashed private function
3    hashes private     list
4     clone    self function
5     debug    self function
6       get    self function
7   hash_do    self function
8  hash_get    self function
9        ls    self function
10  message    self function
12  warning    self function
11  options    self     list
> 
> # getting things (wherever they are, also private stuff)
> ext$get("options")
$verbose
[1] TRUE

$warning
[1] TRUE

> ext$get("hashes")
list()
> 
> # messages
> ext$message("Please note ...")
r6extended : Please note ...
> ext$options$verbose <- FALSE
> ext$message("Please note ...")
> 
> # warning
> ext$warning("Beware! ...")
Warning in ext$warning("Beware! ...") : r6extended : Beware! ...
> 
> # build in hashing
> ext$hash_do()
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Calls: <Anonymous> ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rabi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringdist/libs/stringdist.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringdist/libs/stringdist.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RaceID’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RADanalysis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘radarchart’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: radiant.data
Loading required package: magrittr
Loading required package: ggplot2
Error: package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘ggplot2’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: magrittr
Loading required package: ggplot2
Error: package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘ggplot2’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘radiomics’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: hermite
Loading required package: maxLik
Loading required package: miscTools
Error: package or namespace load failed for ‘maxLik’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘maxLik’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘radix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘radmixture’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘radtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: ReacTran
Loading required package: rootSolve
Error: package or namespace load failed for ‘rootSolve’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rootSolve/libs/rootSolve.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rootSolve/libs/rootSolve.so: failed to map segment from shared object
Error: package ‘rootSolve’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Radviz’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RagGrid’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rags2ridges’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: pracma
Loading required package: RSpincalc
Error: package or namespace load failed for ‘RAHRS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RAHRS/libs/RAHRS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RAHRS/libs/RAHRS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘railtrails’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘raincpc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SDMTools/libs/SDMTools.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SDMTools/libs/SDMTools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rainfreq’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Running examples in ‘rakeR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: integerise
> ### Title: integerise
> ### Aliases: integerise integerize
> 
> ### ** Examples
> 
> cons <- data.frame(
+   "zone"      = letters[1:3],
+   "age_0_49"  = c(8, 2, 7),
+   "age_gt_50" = c(4, 8, 4),
+   "sex_f"     = c(6, 6, 8),
+   "sex_m"     = c(6, 4, 3),
+   stringsAsFactors = FALSE
+ )
> 
> inds <- data.frame(
+   "id"     = LETTERS[1:5],
+   "age"    = c("age_gt_50", "age_gt_50", "age_0_49", "age_gt_50", "age_0_49"),
+   "sex"    = c("sex_m", "sex_m", "sex_m", "sex_f", "sex_f"),
+   "income" = c(2868, 2474, 2231, 3152, 2473),
+   stringsAsFactors = FALSE
+ )
> vars <- c("age", "sex")
> 
> weights     <- weight(cons = cons, inds = inds, vars = vars)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/ipfp/libs/ipfp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/ipfp/libs/ipfp.so: failed to map segment from shared object
Calls: weight ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘intro-to-altmetric.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Higher-Order_Functions_for_Parsing_in_R.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rAmCharts’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ramchoice’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ramcmc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘introduction.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RAMP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RAMP/libs/RAMP.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RAMP/libs/RAMP.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: foreach
Loading required package: doParallel
Loading required package: iterators
Loading required package: parallel
Error: package or namespace load failed for ‘ramsvm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/ramsvm/libs/ramsvm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/ramsvm/libs/ramsvm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘randaes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/randaes/libs/randaes.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/randaes/libs/randaes.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘randgeo_vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘randNames’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘randomcoloR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  kleinkram.cc:1018:18: warning: ‘ '’ directive writing 2 bytes into a region of size between 1 and 1000 [-Wformat-overflow=]
See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/RandomFieldsUtils.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RandomFieldsUtils’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RandomFieldsUtils/libs/RandomFieldsUtils.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RandomFieldsUtils/libs/RandomFieldsUtils.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘randomForestExplainer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘randomForest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/randomForest/libs/randomForest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/randomForest/libs/randomForest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘randomForestSRC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/randomForestSRC/libs/randomForestSRC.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/randomForestSRC/libs/randomForestSRC.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘randomizationInference’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/matrixStats/libs/matrixStats.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/matrixStats/libs/matrixStats.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘randomizr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/randomizr/libs/randomizr.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/randomizr/libs/randomizr.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘randomNames’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘random’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘randomUniformForest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘randquotes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘randstr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rngWELL
Error: package or namespace load failed for ‘rngWELL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rngWELL/libs/rngWELL.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rngWELL/libs/rngWELL.so: failed to map segment from shared object
Error: package ‘rngWELL’ could not be loaded
Execution halted
Running examples in ‘rangeModelMetadata-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: rmmToCSV
> ### Title: Create .csv File From rangeModelMetaData Object
> ### Aliases: rmmToCSV
> 
> ### ** Examples
> 
> rmm=rmmTemplate()
> rasterFiles=list.files(path=paste(system.file(package='dismo'), '/ex', sep=''),
+                        pattern='grd', full.names=TRUE)
> #make a stack of the rasters
> env=raster::stack(rasterFiles)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sp/libs/sp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sp/libs/sp.so: failed to map segment from shared object
Calls: :: ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘rmm_Multispecies.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ranger’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RanglaPunjab’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jpeg/libs/jpeg.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jpeg/libs/jpeg.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RankAggreg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rankcluster’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rankdist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rankFD’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rankhazard’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RANKS’:
 .onLoad failed in loadNamespace() for ‘limma’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/limma/libs/limma.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/limma/libs/limma.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RANN.L1’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RANN.L1/libs/RANN.L1.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RANN.L1/libs/RANN.L1.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RANN’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RANN/libs/RANN.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RANN/libs/RANN.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RApiDatetime’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RApiDatetime/libs/RApiDatetime.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RApiDatetime/libs/RApiDatetime.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rapidraker’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RAPIDR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/S4Vectors/libs/S4Vectors.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/S4Vectors/libs/S4Vectors.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RApiSerialize’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RApiSerialize/libs/RApiSerialize.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RApiSerialize/libs/RApiSerialize.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tools
Error: package or namespace load failed for ‘RAppArmor’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RAppArmor/libs/RAppArmor.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RAppArmor/libs/RAppArmor.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rappdirs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rappdirs/libs/rappdirs.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rappdirs/libs/rappdirs.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rapport’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RAPTOR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  avc_binwr.c:166:9: warning: ‘strncpy’ output truncated before terminating nul copying 3 bytes from a string of the same length [-Wstringop-truncation]
  avc_binwr.c:173:9: warning: ‘strncpy’ output truncated before terminating nul copying 3 bytes from a string of the same length [-Wstringop-truncation]
  avc_binwr.c:180:9: warning: ‘strncpy’ output truncated before terminating nul copying 3 bytes from a string of the same length [-Wstringop-truncation]
  avc_binwr.c:187:9: warning: ‘strncpy’ output truncated before terminating nul copying 3 bytes from a string of the same length [-Wstringop-truncation]
  avc_binwr.c:1453:29: warning: ‘%4.4d’ directive writing between 4 and 10 bytes into a region of size 5 [-Wformat-overflow=]
  avc_binwr.c:1553:28: warning: ‘%s’ directive writing up to 39 bytes into a region of size between 38 and 77 [-Wformat-overflow=]
  avc_e00write.c:386:30: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=]
  avc_e00write.c:387:30: warning: ‘-ID’ directive writing 3 bytes into a region of size between 1 and 40 [-Wformat-overflow=]
  avc_e00write.c:401:61: warning: ‘%s’ directive writing up to 39 bytes into a region of size 17 [-Wformat-overflow=]
  avc_e00write.c:397:61: warning: ‘%s’ directive writing up to 39 bytes into a region of size 17 [-Wformat-overflow=]
  avc_e00write.c:409:39: warning: ‘%s’ directive writing up to 39 bytes into a region of size 33 [-Wformat-overflow=]
See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/RArcInfo.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: RColorBrewer
Error: package or namespace load failed for ‘RArcInfo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RArcInfo/libs/RArcInfo.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RArcInfo/libs/RArcInfo.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rareGE’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rare’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rarhsmm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rARPACK’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RaschSampler’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RaschSampler/libs/RaschSampler.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RaschSampler/libs/RaschSampler.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rasclass’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rasterKernelEstimates’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ratematrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ratios’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rattle’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tcltk
Error: package or namespace load failed for ‘rAverage’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rAverage/libs/rAverage.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rAverage/libs/rAverage.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rAvis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘raw.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rayshader’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rbacon’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  samtools/bam.c:118:2: warning: ‘strncpy’ output truncated before terminating nul copying 4 bytes from a string of the same length [-Wstringop-truncation]
  samtools/razf.c:178:2: warning: ‘strncpy’ output truncated before terminating nul copying 4 bytes from a string of the same length [-Wstringop-truncation]
  rbamtools.cpp:126:10: warning: ‘char* strncat(char*, const char*, size_t)’ specified bound depends on the length of the source argument [-Wstringop-overflow=]
See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/rbamtools.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: refGenome
Loading required package: doBy
Error: package or namespace load failed for ‘doBy’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘doBy’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rBayesianOptimization’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rbefdata’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rBeta2009’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rBeta2009/libs/rBeta2009.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rBeta2009/libs/rBeta2009.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rbgs’:
 .onLoad failed in loadNamespace() for ‘Rbgs’, details:
  call: NULL
  error: .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rbhl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rbi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rbison’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/maps/libs/maps.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/maps/libs/maps.so: failed to map segment from shared object
Execution halted
Running examples in ‘RBitmoji-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: get_comic
> ### Title: Get Bitmoji comic
> ### Aliases: get_comic
> 
> ### ** Examples
> 
> # ID obtained using get_id()
> my_id <- "1551b314-5e8a-4477-aca2-088c05963111-v1"
> get_comic(my_id, tag = "edvard")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/png/libs/png.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/png/libs/png.so: failed to map segment from shared object
Calls: get_comic ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘RBitmoji.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rblpapi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RBMRB’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rbokeh’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rbraries’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rbtc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gmp/libs/gmp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gmp/libs/gmp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rbtt’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: devtools
Error: package or namespace load failed for ‘devtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Error: package ‘devtools’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rbvs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rbvs/libs/rbvs.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rbvs/libs/rbvs.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘R.cache’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘rcane.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rcan’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcarbon’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘RCarb-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: model_DoseRate
> ### Title: Model dose rate evolution in carbonate-rich samples
> ### Aliases: model_DoseRate
> ### Keywords: dplot manip
> 
> ### ** Examples
> 
> ##load example data
> data("Example_Data", envir = environment())
> 
> ##run the function for one sample from
> ##the dataset
> model_DoseRate(
+ data = Example_Data[14,],
+ n.MC = 2,
+ txtProgressBar = FALSE
+ )
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: model_DoseRate ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcartocolor’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: RColorBrewer
Loading required package: maptools
Loading required package: sp
Error: package or namespace load failed for ‘sp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘sp’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RCassandra’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RCassandra/libs/RCassandra.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RCassandra/libs/RCassandra.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rCAT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘rccdates.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcdd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rcdd/libs/rcdd.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rcdd/libs/rcdd.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rcdklibs
Loading required package: rJava
Error: package or namespace load failed for ‘rJava’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Error: package ‘rJava’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcextTools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rchallenge’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rchess’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rchie’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RchivalTag’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RChronoModel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/hdrcde/libs/hdrcde.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/hdrcde/libs/hdrcde.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcicr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘bulk_analysis.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rclean’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RClickhouse’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rclimateca’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: climdex.pcic
Loading required package: PCICt
Error: package or namespace load failed for ‘PCICt’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/PCICt/libs/PCICt.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/PCICt/libs/PCICt.so: failed to map segment from shared object
Error: package ‘PCICt’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rClinicalCodes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rclipboard’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘RClone_qmsevpops.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Running examples in ‘rCMA-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: cmaCalcFitness
> ### Title: Calculate the fitness of a population.
> ### Aliases: cmaCalcFitness
> 
> ### ** Examples
> 
> cma <- cmaNew();
Error: .onLoad failed in loadNamespace() for 'rJava', details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcmdcheck’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/processx/libs/processx.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/processx/libs/processx.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcmdrPlugin.aRnova’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Depends: includes the non-default packages:
  ‘biclust’ ‘fabia’ ‘iBBiG’ ‘superbiclust’ ‘BcDiag’ ‘rqubic’ ‘BicARE’
  ‘s4vd’ ‘BiBitR’
Adding so many packages to the search path is excessive and importing
selectively is preferable.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: biclust
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: Rcmdr
Loading required package: splines
Loading required package: RcmdrMisc
Loading required package: car
Loading required package: carData
Error: package or namespace load failed for ‘car’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Error: package ‘car’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: R2HTML
Loading required package: abind
Loading required package: ez
Error: package or namespace load failed for ‘ez’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘ez’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcmdrPlugin.EZR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcmdrPlugin.FuzzyClust’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: GWRM
Loading required package: RcmdrMisc
Loading required package: car
Loading required package: carData
Error: package or namespace load failed for ‘car’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Error: package ‘car’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: HH
Loading required package: lattice
Error: package or namespace load failed for ‘lattice’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘lattice’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcmdrPlugin.IPSUR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: grid
Loading required package: Rcmdr
Loading required package: splines
Loading required package: RcmdrMisc
Loading required package: car
Loading required package: carData
Error: package or namespace load failed for ‘car’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Error: package ‘car’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: lfstat
Loading required package: xts
Loading required package: zoo
Error: package or namespace load failed for ‘zoo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘zoo’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcmdrPlugin.MA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: ENmisc
Loading required package: Hmisc
Loading required package: lattice
Error: package or namespace load failed for ‘lattice’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘lattice’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: mixlm
Error: package or namespace load failed for ‘mixlm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Error: package ‘mixlm’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcmdrPlugin.PcaRobust’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tcltk
Loading required package: Rcmdr
Loading required package: splines
Loading required package: RcmdrMisc
Loading required package: car
Loading required package: carData
Error: package or namespace load failed for ‘car’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Error: package ‘car’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcmdrPlugin.qual’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcmdrPlugin.RMTCJags’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: SCVA
Loading required package: SCRT
Loading required package: SCMA
Error: package or namespace load failed for ‘RcmdrPlugin.SCDA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: SLC
Error: package or namespace load failed for ‘RcmdrPlugin.SLC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: sos
Loading required package: brew

Attaching package: ‘sos’

The following object is masked from ‘package:utils’:

    ?

Error: package or namespace load failed for ‘RcmdrPlugin.sos’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: randtests
Loading required package: TeachingDemos
Loading required package: tseries
Error: package or namespace load failed for ‘tseries’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Error: package ‘tseries’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: splines
Loading required package: RcmdrMisc
Loading required package: car
Loading required package: carData
Error: package or namespace load failed for ‘car’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Error: package ‘car’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RCMIP5’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘Rcolombos-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: listOrganisms
> ### Title: Returns a character vector corresponding to the currently
> ###   available organisms.
> ### Aliases: listOrganisms
> 
> ### ** Examples
> 
> library('Rcolombos')
> listOrganisms()
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Calls: listOrganisms ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcompanion’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcoreoa’:
 .onLoad failed in loadNamespace() for ‘rcoreoa’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rappdirs/libs/rappdirs.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rappdirs/libs/rappdirs.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcorpora’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcosmo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RCPmod’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppAlgos’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppAnnoy’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppAPT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppArmadillo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppBDT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppBlaze’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppCCTZ’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppClassicExamples’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppClassic’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppCNPy’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppCWB’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppDE’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppDist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppDL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppEigenAD’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppEigen’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppEnsmallen’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppExamples’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppFaddeeva’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppGetconf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppGreedySetCover’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppGSL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppHMM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppHoney’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppMeCab’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppMLPACK’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppMsgPack’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppNLoptExample’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/nloptr/libs/nloptr.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/nloptr/libs/nloptr.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppNumerical’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppParallel’:
 .onLoad failed in loadNamespace() for ‘RcppParallel’, details:
  call: dyn.load(tbb, local = FALSE, now = TRUE)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppParallel/lib/libtbb.so.2’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppParallel/lib/libtbb.so.2: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppQuantuccia’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rcpp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppRedis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppRoll’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppSMC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppStreams’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppTN’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppTOML’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running ‘testthat.R’ [0s/0s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > Sys.setenv("R_TESTS" = "")
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppZiggurat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rcrawler’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘rcreds.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rCRM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcrossref’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcrtan’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Running examples in ‘RCrypto-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: CoinMarketCap_All
> ### Title: 'Coinamrketcap' All Currencies
> ### Aliases: CoinMarketCap_All
> 
> ### ** Examples
> 
> MyData <- CoinMarketCap_All(currency = "CAD")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Calls: CoinMarketCap_All ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rcsdp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcsdp/libs/Rcsdp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcsdp/libs/Rcsdp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RCSF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Rcssplot.Rnw’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcss’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcure’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcv’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RCzechia’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Rd2roxygen.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rdatacite’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rdbnomics’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rddapp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rddensity’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rDEA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rdefra’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘rde_tutorial.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘R.devices’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rdflib’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rdfp’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rdian’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rdice’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Running examples in ‘RDIDQ-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: sumry_categorical
> ### Title: Summary of categorical variable
> ### Aliases: sumry_categorical
> 
> ### ** Examples
> 
> library(descr)
Error: package or namespace load failed for ‘descr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/descr/libs/descr.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/descr/libs/descr.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RDieHarder’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RDieHarder/libs/RDieHarder.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RDieHarder/libs/RDieHarder.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rdimtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rdi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Rdistance_BeginnerLineTransectCovar.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rdist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rdiversity’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RDML’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/checkmate/libs/checkmate.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/checkmate/libs/checkmate.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rdnb’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RDocumentation’:
 .onLoad failed in loadNamespace() for ‘rjson’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rjson/libs/rjson.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rjson/libs/rjson.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘RDota2.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rDotNet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rdoxygen’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rdoxygen/libs/rdoxygen.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rdoxygen/libs/rdoxygen.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rdpack’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rdpla’:
 .onLoad failed in loadNamespace() for ‘rdpla’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rappdirs/libs/rappdirs.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rappdirs/libs/rappdirs.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rdryad’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  Rreadsdpa.c:608:15: warning: ‘strncpy’ output may be truncated copying 3999 bytes from a string of length 3999 [-Wstringop-truncation]
  Rreadsdpa.c:1041:13: warning: ‘strncpy’ output may be truncated copying 39 bytes from a string of length 39 [-Wstringop-truncation]
  Rreadsdpa.c:1042:13: warning: ‘strncpy’ output may be truncated copying 39 bytes from a string of length 39 [-Wstringop-truncation]
  dsdpsetoptions.c:164:4: warning: ‘strncpy’ output may be truncated copying 39 bytes from a string of length 39 [-Wstringop-truncation]
  dsdpsetoptions.c:165:4: warning: ‘strncpy’ output may be truncated copying 39 bytes from a string of length 39 [-Wstringop-truncation]
See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/Rdsdp.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rdsdp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rdsdp/libs/Rdsdp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rdsdp/libs/Rdsdp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rdsm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RDS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rdtq’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  compile.cc:292:69: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class re2::Prog::Inst’; use assignment or value-initialization instead [-Wclass-memaccess]
  regexp.cc:343:33: warning: ‘void* memmove(void*, const void*, size_t)’ writing to an object of type ‘class re2::Regexp’ with no trivial copy-assignment [-Wclass-memaccess]
  regexp.cc:344:32: warning: ‘void* memmove(void*, const void*, size_t)’ writing to an object of type ‘class re2::Regexp’ with no trivial copy-assignment [-Wclass-memaccess]
See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/re2r.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘re2r’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reactR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘readbitmap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jpeg/libs/jpeg.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jpeg/libs/jpeg.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘read.dbc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/read.dbc/libs/read.dbc.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/read.dbc/libs/read.dbc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘readit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘readJDX’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘readMLData’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘readMzXmlData’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘readobj’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘readODS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Running examples in ‘readOffice-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: read_docx
> ### Title: Read data from a Modern Word File
> ### Aliases: read_docx
> 
> ### ** Examples
> 
> read_docx(docx = system.file('extdata','example.docx',package='readOffice'))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: read_docx ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Running examples in ‘readroper-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: read_rpr
> ### Title: Reads Roper Center datasets
> ### Aliases: read_rpr
> 
> ### ** Examples
> 
> fwf_sample <- readroper_example('testMultiCard.txt')
> cat(readr::read_lines(fwf_sample))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: cat ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘readroper.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘readr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘readstata13’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘readtext’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘readxl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘realestateDK-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: BM010
> ### Title: Property prices in housing market
> ### Aliases: BM010
> 
> ### ** Examples
> 
> realestateDK::BM010(EJKAT20 = "1", OMR20 = "00", PRIS20 = "UDBUD", Tid = "1992K1")
Error in is.url(url) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Calls: <Anonymous> ... suppressMessages -> withCallingHandlers -> retrieve_metadata
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘realestateDK.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rebird’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rebmix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Running examples in ‘rebus.base-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: Anchors
> ### Title: The start or end of a string.
> ### Aliases: Anchors START END exactly
> ### Keywords: datasets
> 
> ### ** Examples
> 
> START
<regex> ^
> END
<regex> $
> 
> # Usage
> x <- c("catfish", "tomcat", "cat")
> (rx_start <- START %R% "cat")
<regex> ^cat
> (rx_end <- "cat" %R% END)
<regex> cat$
> (rx_exact <- exactly("cat"))
<regex> ^cat$
> stringi::stri_detect_regex(x, rx_start)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: :: ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Running examples in ‘RECA-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: rca
> ### Title: Relevant Component Analysis
> ### Aliases: rca
> 
> ### ** Examples
> 
> library("MASS") # generate synthetic multivariate normal data
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: kriging
Error: package or namespace load failed for ‘kriging’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/kriging/libs/kriging.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/kriging/libs/kriging.so: failed to map segment from shared object
Error: package ‘kriging’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rechonest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: recommenderlab
Loading required package: Matrix
Error: package or namespace load failed for ‘Matrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘Matrix’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reconstructr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  phonet.c:1207:34: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=]
  phonet.c:1208:34: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=]
See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/RecordLinkage.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: DBI
Loading required package: RSQLite
Error: package or namespace load failed for ‘RSQLite’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘RSQLite’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘recosystem’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘recurse’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reda’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘redcapAPI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/chron/libs/chron.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/chron/libs/chron.so: failed to map segment from shared object
Execution halted
Running examples in ‘REDCapR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: redcap_version
> ### Title: Determine version of REDCap instance
> ### Aliases: redcap_version
> 
> ### ** Examples
> 
> library(REDCapR) #Load the package into the current R session.
> uri      <- "https://bbmc.ouhsc.edu/redcap/api/"
> token    <- "9A81268476645C4E5F03428B8AC3AA7B"
> redcap_version(redcap_uri=uri, token=token)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Calls: redcap_version ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘BasicREDCapROperations.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RedditExtractoR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: snowfall
Loading required package: snow
Loading required package: fields
Loading required package: spam
Loading required package: dotCall64
Error: package or namespace load failed for ‘dotCall64’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/dotCall64/libs/dotCall64.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/dotCall64/libs/dotCall64.so: failed to map segment from shared object
Error: package ‘dotCall64’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: REddyProc
Error: package or namespace load failed for ‘REddyProc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Error: package ‘REddyProc’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘REddyProc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘redist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘redland’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rEDM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘red’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘redux’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redux/libs/redux.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/redux/libs/redux.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘referenceIntervals’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: doBy
Error: package or namespace load failed for ‘doBy’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘doBy’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ref.ICAR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘refimpact.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘refinr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringdist/libs/stringdist.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringdist/libs/stringdist.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RefManageR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘refset.rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘refuge’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘refund’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘refund.shiny’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: bestglm
Loading required package: leaps
Error: package or namespace load failed for ‘leaps’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/leaps/libs/leaps.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/leaps/libs/leaps.so: failed to map segment from shared object
Error: package ‘leaps’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘regexSelect’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘reghelper-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: graph_model
> ### Title: Graph interactions for fitted models.
> ### Aliases: graph_model graph_model.lm graph_model.aov graph_model.glm
> ###   graph_model.lme graph_model.merMod
> 
> ### ** Examples
> 
> # iris data
> model <- lm(Sepal.Width ~ Sepal.Length * Species, data=iris)
> graph_model_q(model, y='Sepal.Width', x='Sepal.Length', lines='Species')
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: graph_model_q ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘regnet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘regplot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: denpro
Error: package or namespace load failed for ‘denpro’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/denpro/libs/denpro.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/denpro/libs/denpro.so: failed to map segment from shared object
Error: package ‘denpro’ could not be loaded
Execution halted
Error in re-building vignettes:
  ...
RegressionFactory 0.7.2
Heart and Lung Institute, Imperial College London &
Scientific Computing Group, Sentrana Inc.

Error: processing vignette ‘RegressionFactory.Rnw’ failed with diagnostics:
 chunk 9 
Error : package or namespace load failed for 'sns' in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Running examples in ‘regress-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: regress
> ### Title: Fit a Gaussian Linear Model with Linear Covariance Structure
> ### Aliases: regress print.regress summary.regress BLUP
> ### Keywords: regression models multivariate
> 
> ### ** Examples
> 
> 
>   ######################
>   ## Comparison with lme
>   ######################
> 
>   ## Example of Random Effects model from Venables and Ripley, page 205
>   library(nlme)
Error: package or namespace load failed for ‘nlme’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘regRSM’:
 .onLoad failed in loadNamespace() for ‘Rmpi’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rmpi/libs/Rmpi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rmpi/libs/Rmpi.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘RSCA-vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rehh.data
Loading required package: gplots
Error: package or namespace load failed for ‘gplots’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Error: package ‘gplots’ could not be loaded
Execution halted
Running examples in ‘reinforcedPred-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: modelFit
> ### Title: Model fit for the training set
> ### Aliases: modelFit
> 
> ### ** Examples
> 
> library(reinforcedPred)
> 
> # take the example training data (univariate Z) from the reinforcedPred package
> # see documentation for details about the data set train_data_uniZ
> Y <- as.numeric(train_data_uniZ$Y)
> tildeX.missing <- as.matrix(train_data_uniZ[,2:62])
> Z <- as.numeric(train_data_uniZ$Z)
> 
> # analysis starts
> startT <- 55
> link <- "probit"
> weight <- rep(1, length(Y))
> 
> result <- modelFit(Y, tildeX.missing, Z, startT, link, pve = 0.99, nbasis = 10, weight)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: modelFit ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Running examples in ‘reinforcelearn-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: CliffWalking
> ### Title: Cliff Walking
> ### Aliases: CliffWalking cliff.walking
> 
> ### ** Examples
> 
> env = makeEnvironment("cliff.walking")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/checkmate/libs/checkmate.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/checkmate/libs/checkmate.so: failed to map segment from shared object
Calls: makeEnvironment ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘agents.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘ReinforcementLearning-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ReinforcementLearning
> ### Title: Performs reinforcement learning
> ### Aliases: ReinforcementLearning rl
> 
> ### ** Examples
> 
> # Sampling data (1000 grid sequences)
> data <- sampleGridSequence(1000)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Calls: sampleGridSequence ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘ReinforcementLearning.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ReIns’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘restrictions.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Relatedness’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Relatedness/libs/Relatedness.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Relatedness/libs/Relatedness.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘relations’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sets/libs/sets.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sets/libs/sets.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reldist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: trust
Loading required package: sna
Loading required package: statnet.common
Error: package or namespace load failed for ‘statnet.common’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘statnet.common’ could not be loaded
Execution halted
Running ‘testthat.R’ [0s/0s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > require(testthat)
  Loading required package: testthat
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  > require(RelimpPCR)
  Loading required package: RelimpPCR
  > test_check("RelimpPCR")
  Error in test_check("RelimpPCR") : could not find function "test_check"
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘relSim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rematch2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘remedy’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘remindR_vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘remMap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/remMap/libs/remMap.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/remMap/libs/remMap.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘remoter’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/argon2/libs/argon2.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/argon2/libs/argon2.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘dependencies.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rem’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rENA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘REndo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: gWidgets
Loading required package: gWidgetstcltk
Loading required package: tcltk
Loading required package: digest
Error: package or namespace load failed for ‘digest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Error: package ‘digest’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rentrez’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Running examples in ‘Renvlp-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: boot.senv
> ### Title: Bootstrap for senv
> ### Aliases: boot.senv
> 
> ### ** Examples
> 
> data(sales)
> X <- sales[, 1:3]
> Y <- sales[, 4:7]
> 
> u <- u.senv(X, Y)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/truncnorm/libs/truncnorm.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/truncnorm/libs/truncnorm.so: failed to map segment from shared object
Calls: u.senv ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Renvlp.Rnw’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘repfdr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘repijson’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/network/libs/network.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/network/libs/network.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘REPLesentR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: spatstat.utils
Error: package or namespace load failed for ‘spatstat.utils’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so: failed to map segment from shared object
Error: package ‘spatstat.utils’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Replicate’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘replicationInterval’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: wrapr
Error: package or namespace load failed for ‘replyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘repmis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘repolr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘repo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reportReg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reportROC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reportr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/ore/libs/ore.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/ore/libs/ore.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘represtools.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reprex’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘reproducer-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ExtractMAStatistics
> ### Title: ExtractMAStatistics
> ### Aliases: ExtractMAStatistics
> 
> ### ** Examples
> 
> ExpData=reproducer::KitchenhamMadeyskiBrereton.ExpData
> #Extract the experiment basic statics
> S1data=subset(ExpData,ExpData=="S1")
> #Use the descriptive data to construct effect size
> S1EffectSizes = reproducer::PrepareForMetaAnalysisGtoR(S1data$Mc,
+ S1data$Mt,S1data$SDc,S1data$SDt,S1data$Nc,S1data$Nt)
> # Do a random effect meta-analysis of the transformed r_pbs effect size
> S1MA = metafor::rma(S1EffectSizes$zr, S1EffectSizes$vi)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: :: ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reproducible’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘repr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Running examples in ‘REPTILE-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: REPTILE-package
> ### Title: Regulatory Element Prediction
> ### Aliases: REPTILE-package REPTILE
> 
> ### ** Examples
> 
> library("REPTILE")
> data("rsd")
> 
> ## Training (needs a few minutes and ~1.8 Gb memory)
> reptile.model <- reptile_train(rsd$training_data$region_epimark,
+                                rsd$training_data$region_label,
+                                rsd$training_data$DMR_epimark,
+                                rsd$training_data$DMR_label,
+                                ntree=50)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/randomForest/libs/randomForest.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/randomForest/libs/randomForest.so: failed to map segment from shared object
Calls: reptile_train ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘repurrrsive’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reqres’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/brotli/libs/brotli.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/brotli/libs/brotli.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: httr
Error: package or namespace load failed for ‘request’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘requireR.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rerddap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reReg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rerf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rERR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running ‘runTests.R’ [0s/0s]
Running the tests in ‘tests/runTests.R’ failed.
Complete output:
  > # Copyright 2014 Google Inc. All rights reserved.
  > #
  > # Use of this source code is governed by a BSD-style
  > # license that can be found in the LICENSE file or at
  > # http://opensource.org/licenses/BSD-3-Clause
  > 
  > # Run all .t tests in tests/
  > 
  > require("splus2R")
  Loading required package: splus2R
  Error: package or namespace load failed for 'splus2R' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/splus2R/libs/splus2R.so':
    /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/splus2R/libs/splus2R.so: failed to map segment from shared object
  > 
  > files <- list.files(pattern = "\\.t$")
  > 
  > for(file in files)
  +   do.test(file)
  Error in do.test(file) : could not find function "do.test"
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘resemble’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reshape2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: reshape2
Error: package or namespace load failed for ‘reshape2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘reshape2’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reshape’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ResourceSelection’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘respirometry-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: RQ
> ### Title: Calculate respiratory quotient
> ### Aliases: RQ
> 
> ### ** Examples
> 
> o2_observations <- c(21, 18, 14.5, 7)
> pH_observations <- c(8.05, 7.98, 7.86, 7.65)
> TA_observations <- c(2222, 2219, 2208, 2214)
> 
> RQ(o2 = o2_observations, o2_unit = 'kPa', pH = pH_observations,
+ TA = TA_observations, temp = 20, sal = 33)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: RQ ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Running examples in ‘restez-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: count_db_ids
> ### Title: Return the number of ids
> ### Aliases: count_db_ids
> 
> ### ** Examples
> 
> library(restez)
> restez_path_set(filepath = tempdir())
... Creating '/tmp/Rtmp86xJfT/restez'
... Creating '/tmp/Rtmp86xJfT/restez/downloads'
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Calls: restez_path_set ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘restfulr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘restlos’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/som/libs/som.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/som/libs/som.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘REST’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘restrictedMVN’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘restriktor’:
 .onLoad failed in loadNamespace() for ‘mnormt’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mnormt/libs/mnormt.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mnormt/libs/mnormt.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘resumer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reticulate’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘retimes’:
 .onLoad failed in loadNamespace() for ‘retimes’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/retimes/libs/retimes.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/retimes/libs/retimes.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘retistruct’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/geometry/libs/geometry.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/geometry/libs/geometry.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reutils’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘quickstart.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘revdbayes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘revealjs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RevEcoR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘revengc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘revgeo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘revtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Running examples in ‘Rexperigen-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: server.version
> ### Title: Returns the version of an Experigen server
> ### Aliases: server.version
> 
> ### ** Examples
> 
> server.version("db.phonologist.org")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Calls: server.version ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rexpokit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘rex-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: capture
> ### Title: Create a capture group
> ### Aliases: capture . capture_group
> 
> ### ** Examples
> 
> 
> # Match paired quotation marks
> re <- rex(
+   # first quotation mark
+   capture(quotes),
+ 
+   # match all non-matching quotation marks
+   zero_or_more(except(capture_group(1))),
+ 
+   # end quotation mark (matches first)
+   capture_group(1)
+ )
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lazyeval/libs/lazyeval.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lazyeval/libs/lazyeval.so: failed to map segment from shared object
Calls: rex ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘log_parsing.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: httr
Loading required package: rjson
Error: package or namespace load failed for ‘rjson’:
 .onLoad failed in loadNamespace() for ‘rjson’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rjson/libs/rjson.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rjson/libs/rjson.so: failed to map segment from shared object
Error: package ‘rjson’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rfacebookstat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rFerns’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rFerns/libs/rFerns.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rFerns/libs/rFerns.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: bdsmatrix
Error: package or namespace load failed for ‘bdsmatrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bdsmatrix/libs/bdsmatrix.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bdsmatrix/libs/bdsmatrix.so: failed to map segment from shared object
Error: package ‘bdsmatrix’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rfigshare’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RJSONIO/libs/RJSONIO.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RJSONIO/libs/RJSONIO.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: R.oo
Loading required package: R.methodsS3
R.methodsS3 v1.7.1 (2016-02-15) successfully loaded. See ?R.methodsS3 for help.
R.oo v1.22.0 (2018-04-21) successfully loaded. See ?R.oo for help.

Attaching package: ‘R.oo’

The following objects are masked from ‘package:methods’:

    getClasses, getMethods

The following objects are masked from ‘package:base’:

    attach, detach, gc, load, save

Error: package or namespace load failed for ‘R.filesets’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rfishbase’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Running examples in ‘RFishBC-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: aStandard
> ### Title: Finds standard intercept (a) for Fraser-Lee back-calculation
> ###   model for a particular species.
> ### Aliases: aStandard
> ### Keywords: manip
> 
> ### ** Examples
> 
> aStandard("Bluegill")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: aStandard ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rfisheries’:
 .onLoad failed in loadNamespace() for ‘rjson’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rjson/libs/rjson.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rjson/libs/rjson.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rfit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rfit/libs/Rfit.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rfit/libs/Rfit.so: failed to map segment from shared object
Execution halted
Running examples in ‘RFLPtools-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: RFLPtools-package
> ### Title: Tools to analyse RFLP-data
> ### Aliases: RFLPtools-package RFLPtools
> ### Keywords: package multivariate cluster
> 
> ### ** Examples
> 
> data(RFLPdata)
> res <- RFLPdist(RFLPdata)
> plot(hclust(res[[1]]), main = "Euclidean distance")
> 
> par(mfrow = c(1,2))
> plot(hclust(RFLPdist(RFLPdata, nrBands = 3)), cex = 0.7)
> RFLPplot(RFLPdata, nrBands = 3, mar.bottom = 6, cex.axis = 0.8)
> 
> data(RFLPref)
> RFLPrefplot(RFLPdata, RFLPref, nrBands = 6, cex.axis = 0.8)
> 
> 
> library(MKmisc)
Error: package or namespace load failed for ‘MKmisc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Loading required package: RColorBrewer

Error: processing vignette ‘RFLPtools.Rnw’ failed with diagnostics:
 chunk 5 (label = cor) 
Error : package or namespace load failed for ‘MKmisc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: AUCRF
Loading required package: randomForest
Error: package or namespace load failed for ‘randomForest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/randomForest/libs/randomForest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/randomForest/libs/randomForest.so: failed to map segment from shared object
Error: package ‘randomForest’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rfml’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rfm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rfmtool’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rfmtool/libs/Rfmtool.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rfmtool/libs/Rfmtool.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RFOC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/dotCall64/libs/dotCall64.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/dotCall64/libs/dotCall64.so: failed to map segment from shared object
Execution halted
Running examples in ‘Rfolding-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: folding.statistics
> ### Title: Computes the folding statistics of the input data
> ### Aliases: folding.statistics
> 
> ### ** Examples
> 
> library(MASS)
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘internals.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RForcecom’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rforensicbatwing’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RFreak’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rFSA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rFTRLProximal’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘rfUtilities-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: bivariate.partialDependence
> ### Title: Bivariate partial-dependency plot
> ### Aliases: bivariate.partialDependence
> 
> ### ** Examples
> 
>  library(randomForest)
Error: package or namespace load failed for ‘randomForest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/randomForest/libs/randomForest.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/randomForest/libs/randomForest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: httr
Error: package or namespace load failed for ‘Rga4gh’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rgam’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RGA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rgbif’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: foreach
Loading required package: plyr
Error: package or namespace load failed for ‘plyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘plyr’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rgbp’:
 .onLoad failed in loadNamespace() for ‘mnormt’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mnormt/libs/mnormt.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mnormt/libs/mnormt.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rgb’:
 .onLoad failed in loadNamespace() for ‘Rgb’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rgb/libs/Rgb.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rgb/libs/Rgb.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RGCCA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rgcvpack’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rgcvpack/libs/rgcvpack.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rgcvpack/libs/rgcvpack.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: RMAWGEN
Loading required package: chron
Error: package or namespace load failed for ‘chron’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/chron/libs/chron.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/chron/libs/chron.so: failed to map segment from shared object
Error: package ‘chron’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rgenoud’:
 .onLoad failed in loadNamespace() for ‘rgenoud’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rgenoud/libs/rgenoud.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rgenoud/libs/rgenoud.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘using-samplers.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rgeoapi’:
 .onLoad failed in loadNamespace() for ‘rjson’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rjson/libs/rjson.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rjson/libs/rjson.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rgeolocate’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rgeopat2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rgeos’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RGF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RGtk2/libs/RGtk2.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RGtk2/libs/RGtk2.so: failed to map segment from shared object
Error: package or namespace load failed for ‘rggobi’:
 .onLoad failed in loadNamespace() for ‘RGtk2’, details:
  call: install_all()
  error: This platform is not yet supported by the automatic installer. Please install GTK+ manually, if necessary. See: http://www.gtk.org
In addition: Warning message:
Failed to load RGtk2 dynamic library, attempting to install it. 
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rgho’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rglobi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rgl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rglwidget’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rgnuplot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rgnuplot/libs/Rgnuplot.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rgnuplot/libs/Rgnuplot.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rGoodData’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: httr
Loading required package: lubridate
Error: package or namespace load failed for ‘lubridate’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Error: package ‘lubridate’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RgoogleMaps’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/png/libs/png.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/png/libs/png.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rgoogleslides’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: grid
Error: package or namespace load failed for ‘RGraphics’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RGreenplum’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rgretl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rgsp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RGtk2/libs/RGtk2.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RGtk2/libs/RGtk2.so: failed to map segment from shared object
Error: package or namespace load failed for ‘RGtk2’:
 .onLoad failed in loadNamespace() for ‘RGtk2’, details:
  call: install_all()
  error: This platform is not yet supported by the automatic installer. Please install GTK+ manually, if necessary. See: http://www.gtk.org
In addition: Warning message:
Failed to load RGtk2 dynamic library, attempting to install it. 
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rhandsontable’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: bit64
Loading required package: bit
Error: package or namespace load failed for ‘bit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bit/libs/bit.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bit/libs/bit.so: failed to map segment from shared object
Error: package ‘bit’ could not be loaded
Execution halted
Running examples in ‘rhierbaps-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: hierBAPS
> ### Title: hierBAPS
> ### Aliases: hierBAPS
> 
> ### ** Examples
> 
> snp.matrix <- load_fasta(system.file("extdata", "small_seqs.fa", package = "rhierbaps"))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: load_fasta ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rhli’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rhli/libs/rhli.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rhli/libs/rhli.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rhmmer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: pso
Loading required package: Hmisc
Loading required package: lattice
Error: package or namespace load failed for ‘lattice’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘lattice’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RhpcBLASctl’:
 .onLoad failed in loadNamespace() for ‘RhpcBLASctl’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RhpcBLASctl/libs/RhpcBLASctl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RhpcBLASctl/libs/RhpcBLASctl.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  RhpcMPI.c:301:5: warning: ‘strncpy’ specified bound 4096 equals destination size [-Wstringop-truncation]
See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/Rhpc.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rhpc’:
 .onLoad failed in loadNamespace() for ‘Rhpc’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rhpc/libs/Rhpc.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rhpc/libs/Rhpc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tcltk
Loading required package: tkrplot
Loading required package: waveslim
Error: package or namespace load failed for ‘waveslim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/waveslim/libs/waveslim.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/waveslim/libs/waveslim.so: failed to map segment from shared object
Error: package ‘waveslim’ could not be loaded
In addition: Warning message:
loading Rplot failed 
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rhub’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/processx/libs/processx.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/processx/libs/processx.so: failed to map segment from shared object
Execution halted
Running examples in ‘rhymer-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: datamuse_api
> ### Title: Call Datamuse API and return data.
> ### Aliases: datamuse_api
> 
> ### ** Examples
> 
> datamuse_api("/words?rel_rhy=test")
Error in is.url(url) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Calls: datamuse_api ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘intro-to-rhymer.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RI2by2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘RIA.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Ricetl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rich’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ridge’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/ridge/libs/ridge.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/ridge/libs/ridge.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RiemBase’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘riem_package.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘rif_vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Running examples in ‘rijkspalette-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: rijksPalette
> ### Title: Rijkspalette function
> ### Aliases: rijksPalette
> 
> ### ** Examples
> 
> pal <- rijksPalette("Vermeer Letter")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Calls: rijksPalette ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rilostat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RImageJROI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RImagePalette’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rinat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: regtest
package rindex is under development and still may change considerably
Error: package or namespace load failed for ‘rindex’:
 .onLoad failed in loadNamespace() for ‘rindex’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rindex/libs/rindex.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rindex/libs/rindex.so: failed to map segment from shared object
In addition: Warning message:
In fun(libname, pkgname) :
  package regtest is under development and still may change considerably
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ring’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/ring/libs/ring.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/ring/libs/ring.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RInside’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RInSp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RInSp/libs/RInSp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RInSp/libs/RInSp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rintrojs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  cornellout.cpp:99:20: warning: ‘%2d’ directive writing between 2 and 11 bytes into a region of size between 0 and 931 [-Wformat-overflow=]
  cornellout.cpp:137:26: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=]
  cornellout.cpp:129:26: warning: ‘%s’ directive writing up to 999 bytes into a region of size between 988 and 995 [-Wformat-overflow=]
  mat.cpp:315:4: warning: ‘*<unknown>.dataMat::p’ is used uninitialized in this function [-Wuninitialized]
  tilia.cpp:179:14: warning: ‘char* strncpy(char*, const char*, size_t)’ output may be truncated copying 61 bytes from a string of length 199 [-Wstringop-truncation]
  tilia.cpp:180:10: warning: ‘char* strncpy(char*, const char*, size_t)’ output may be truncated copying 19 bytes from a string of length 19 [-Wstringop-truncation]
  tilia.cpp:225:14: warning: ‘char* strncpy(char*, const char*, size_t)’ output may be truncated copying 8 bytes from a string of length 199 [-Wstringop-truncation]
  tilia.cpp:228:17: warning: ‘char* strncpy(char*, const char*, size_t)’ output may be truncated copying 8 bytes from a string of length 29 [-Wstringop-truncation]
See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/rioja.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rioja’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rio’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rip46’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tcltk
Loading required package: parallel
Error: package or namespace load failed for ‘ripa’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘rIP-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: getIPinfo
> ### Title: Passes an array of IP addresses to iphub.info and returns a
> ###   dataframe with details of IP
> ### Aliases: getIPinfo
> 
> ### ** Examples
> 
> id <- c(1,2,3,4) # fake respondent id's
> ips <- c(123.232, 213.435, 234.764, 543.765) # fake ips
> data <- data.frame(id,ips)
> getIPinfo(data, "ips", "MzI3NDpJcVJKSTdIdXpQSUJLQVhZY1RvRxaXFsFW3jS3xcQ")
* Consider storing the ipDF as an object to write as an external df, e.g., write.csv(ipDF, 'ipDF.csv')

  |                                                                            
  |                                                                      |   0%Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Calls: getIPinfo ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rIsing’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘riskPredictClustData’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: Runuran
Error: package or namespace load failed for ‘Runuran’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Runuran/libs/Runuran.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Runuran/libs/Runuran.so: failed to map segment from shared object
Error: package ‘Runuran’ could not be loaded
Execution halted
Running examples in ‘riskyr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot.riskyr
> ### Title: Plot information of a riskyr object.
> ### Aliases: plot.riskyr
> 
> ### ** Examples
> 
> # Select a scenario from list of scenarios:
> s25 <- scenarios$n25  # select scenario 25 from scenarios
> 
> # Plot different types:
> plot(s25)  # => default plot (fnet)
> plot(s25, plot.type = "fnet")  # => network diagram (same as default)
> plot(s25, plot.type = "tree", area = "vr") # => tree diagram (with vertical rectangles)
> plot(s25, plot.type = "curve", what = "all")
> plot(s25, plot.type = "icons")
> plot(s25, plot.type = "icons", type = "mosaic")  # passing on additional parameter to create.
> plot(s25, plot.type = "mosaic")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: plot ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘A_user_guide.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ritis’:
 .onLoad failed in loadNamespace() for ‘ritis’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘riverdist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rivr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RJaCGH’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RJaCGH/libs/RJaCGH.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RJaCGH/libs/RJaCGH.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rjade’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RJafroc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rJava’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rjazz’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: DBI
Loading required package: rJava
Error: package or namespace load failed for ‘rJava’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Error: package ‘rJava’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rje’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rje/libs/rje.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rje/libs/rje.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘r.jive’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: madness
Error: package or namespace load failed for ‘madness’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘madness’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rjsonapi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RJSONIO’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RJSONIO/libs/RJSONIO.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RJSONIO/libs/RJSONIO.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rjson’:
 .onLoad failed in loadNamespace() for ‘rjson’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rjson/libs/rjson.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rjson/libs/rjson.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rjstat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/checkmate/libs/checkmate.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/checkmate/libs/checkmate.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rJST’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJST/libs/rJST.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJST/libs/rJST.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RKEAjars’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RKEA’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RKEELjars’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RKEEL’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Running examples in ‘RKlout-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: RKlout
> ### Title: RKlout
> ### Aliases: RKlout urlGetScore urlNetId
> ### Keywords: package
> 
> ### ** Examples
> 
> ## The inputs which are required for the function to work
>   apiKey <- "ujj8**************wfjw"  ## Api Key received from Klout Developer portal
>   twUser <- "BarackObama" ## The Twitter Username/handle which the 'Klout' score is intended for
> ## Get Klout Score 
>     kloutScore <- RKlout(apiKey,twUser)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Calls: RKlout ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rkvo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘data.handling.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rLandsat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rlang’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rlas’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rld’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rleafmap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  RngStream.c:347:4: warning: ‘strncpy’ specified bound depends on the length of the source argument [-Wstringop-overflow=]
See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/rlecuyer.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rlecuyer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlecuyer/libs/rlecuyer.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlecuyer/libs/rlecuyer.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: foreach
Loading required package: doParallel
Loading required package: iterators
Loading required package: parallel
Error: package or namespace load failed for ‘rlfsm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rlibeemd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rLiDAR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: httr
Loading required package: XML
Error: package or namespace load failed for ‘XML’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Error: package ‘XML’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rlist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rlmDataDriven’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rlme’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rlm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlm/libs/rlm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlm/libs/rlm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: doParallel
Loading required package: foreach
Loading required package: iterators
Loading required package: parallel
Error: package or namespace load failed for ‘Rlof’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rlof/libs/Rlof.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rlof/libs/Rlof.so: failed to map segment from shared object
Execution halted
Running examples in ‘RLogicalOps-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: processLogiOper
> ### Title: Processing Logical Operations
> ### Aliases: processLogiOper
> 
> ### ** Examples
> 
> logicalOperation <- "AND(Cake,OR(Birthday,Anniversary))"
> stringList <- c("The cake at the birthday was awesome."
+                 ,"Their anniversary was last week.")
> 
> processLogiOper(logicalOperation, stringList)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: processLogiOper ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: PythonInR
Error: package or namespace load failed for ‘PythonInR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/PythonInR/libs/PythonInR.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/PythonInR/libs/PythonInR.so: failed to map segment from shared object
Error: package ‘PythonInR’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RLRsim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RLT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RLT/libs/RLT.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RLT/libs/RLT.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: Luminescence
Loading required package: magrittr
Error: package or namespace load failed for ‘Luminescence’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Error: package ‘Luminescence’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RLumShiny’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rly’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rly/libs/rly.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rly/libs/rly.so: failed to map segment from shared object
Execution halted
Running examples in ‘rma.exact-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: rma.exact
> ### Title: Compute an exact confidence interval for the grand mean in a
> ###   normal-normal random effects meta-analysis.
> ### Aliases: rma.exact
> 
> ### ** Examples
> 
> set.seed(1)
> 
> K <- 5
> c0 <- 1
> mu0 <- 0
> tau2 <- 12.5
> vi <- (seq(1, 5, length=K))^2
> yi <- rnorm(K)*sqrt(vi+tau2)+mu0
> rma.exact(yi=yi,vi=vi)
Warning in yi - mu.fixed.obs :
  Recycling array of length 1 in vector-array arithmetic is deprecated.
  Use c() or as.vector() instead.

      lower    upper
1 -5.387786 5.443314
> 
> ## plotting a conifdence region and printing CIs with an RMA.Exact object
> rma0 <- rma.exact(yi=yi,vi=vi,level=NULL)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: rma.exact ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmake’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  origcmaes.cc:2852:13: warning: ‘char* strncat(char*, const char*, size_t)’ specified bound depends on the length of the source argument [-Wstringop-overflow=]
  origcmaes.cc:2855:12: warning: ‘char* strncat(char*, const char*, size_t)’ specified bound depends on the length of the source argument [-Wstringop-overflow=]
  origcmaes.cc:2858:12: warning: ‘char* strncat(char*, const char*, size_t)’ specified bound depends on the length of the source argument [-Wstringop-overflow=]
See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/Rmalschains.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmapshaper’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘rmapzen-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: costing_models
> ### Title: Costing model constructors and helpers
> ### Aliases: costing_models mz_costing mz_costing_options
> ### Keywords: datasets
> 
> ### ** Examples
> 
> ## creates a pedestrian costing model with walking speed of 2 km/hr
> ## that also avoids alleys.
> ## non-multimodal costing models will accept 0 or more options from the
> ## appropriate list.
> mz_costing$pedestrian(
+     mz_costing_options$pedestrian$walking_speed(2.0),
+     mz_costing_options$pedestrian$alley_factor(0)
+ )
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Calls: <Anonymous> ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘rmapzen-introduction.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RMariaDB’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RmarineHeatWaves’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmarkdown’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RMark’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmatio’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘rmcorr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot.rmc
> ### Title: Plot the repeated measures correlation coefficient.
> ### Aliases: plot.rmc
> 
> ### ** Examples
> 
> ## Bland Altman 1995 data
> my.rmc <- rmcorr(participant = Subject, measure1 = PacO2, measure2 = pH, dataset = bland1995)
Warning in rmcorr(participant = Subject, measure1 = PacO2, measure2 = pH,  :
  'Subject' coerced into a factor
Error: .onLoad failed in loadNamespace() for 'mnormt', details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mnormt/libs/mnormt.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mnormt/libs/mnormt.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Combined_paper_figures.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RMCriteria’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmda’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmdformats’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: knitr
Loading required package: dplyr
Error: package or namespace load failed for ‘dplyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Error: package ‘dplyr’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmdshower’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RmecabKo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmetalog’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmetasim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rugarch
Loading required package: parallel
Error: package or namespace load failed for ‘rugarch’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/truncnorm/libs/truncnorm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/truncnorm/libs/truncnorm.so: failed to map segment from shared object
Error: package ‘rugarch’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rminer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: Rmixmod
Loading required package: Rcpp
Error: package or namespace load failed for ‘Rcpp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘Rcpp’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RMKdiscrete’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RMKdiscrete/libs/RMKdiscrete.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RMKdiscrete/libs/RMKdiscrete.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RMOAjars’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: RMOAjars
Error: package or namespace load failed for ‘RMOAjars’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Error: package ‘RMOAjars’ could not be loaded
Execution halted
Running examples in ‘rmonad-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: clear_cache
> ### Title: Clear cached values and delete temporary files
> ### Aliases: clear_cache
> 
> ### ** Examples
> 
> 256 %v>% sqrt %>>% sqrt %>>% sqrt  -> m
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Calls: %>>% ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘cheatsheet.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rMouse’:
 .onLoad failed in loadNamespace() for ‘rMouse’, details:
  call: NULL
  error: .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rmpi’:
 .onLoad failed in loadNamespace() for ‘Rmpi’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rmpi/libs/Rmpi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rmpi/libs/Rmpi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmsfuns’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmumps’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmutil’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rmutil/libs/rmutil.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rmutil/libs/rmutil.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmweather’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: psychotools
Error: package or namespace load failed for ‘psychotools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/psychotools/libs/psychotools.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/psychotools/libs/psychotools.so: failed to map segment from shared object
Error: package ‘psychotools’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: DBI
Error: package or namespace load failed for ‘RMySQL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RMySQL/libs/RMySQL.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RMySQL/libs/RMySQL.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmytarget’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: ecodist
Error: package or namespace load failed for ‘ecodist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/ecodist/libs/ecodist.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/ecodist/libs/ecodist.so: failed to map segment from shared object
Error: package ‘ecodist’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rnaturalearthdata’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rnaturalearth’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rncl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘RndTexExams-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: engine.analyze.class.exam
> ### Title: Function that breaks latex file of exam class exam into a
> ###   dataframe (internal use)
> ### Aliases: engine.analyze.class.exam
> 
> ### ** Examples
> 
> f.in <- system.file("extdata", "MyRandomTest_exam.tex", package = "RndTexExams")
> my.text <- stringi::stri_read_lines(f.in)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: :: ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘rte-vignette_creating_exams.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rnetcarto’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rnetcarto/libs/rnetcarto.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rnetcarto/libs/rnetcarto.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RNetCDF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RNetCDF/libs/RNetCDF.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RNetCDF/libs/RNetCDF.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RNGforGPD’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/VGAM/libs/VGAM.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/VGAM/libs/VGAM.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rngSetSeed’:
 .onLoad failed in loadNamespace() for ‘rngSetSeed’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rngSetSeed/libs/rngSetSeed.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rngSetSeed/libs/rngSetSeed.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rngwell19937’:
 .onLoad failed in loadNamespace() for ‘rngwell19937’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rngwell19937/libs/rngwell19937.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rngwell19937/libs/rngwell19937.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rngWELL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rngWELL/libs/rngWELL.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rngWELL/libs/rngWELL.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RNHANES’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RNifti’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RNiftyReg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rnightlights’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rNMF’:
 .onLoad failed in loadNamespace() for ‘nnls’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/nnls/libs/nnls.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/nnls/libs/nnls.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rnmr1D’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rnn’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rnoaa’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RNOmni’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rnpn’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Running examples in ‘RNRCS-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: grabNRCS.elements
> ### Title: grabNRCS.elements
> ### Aliases: grabNRCS.elements
> ### Keywords: atmopsheric atmosphere, climate, data, environment,
> ###   environmental in-situ, weather
> 
> ### ** Examples
> 
> grabNRCS.elements(site_id='SCAN:2221')
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: grabNRCS.elements ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rnrfa’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘rnr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: sensitize.data.frame
> ### Title: Compute the sensitivity-adjusted estimates of predicted outcome
> ###   given treatment/control
> ### Aliases: sensitize.data.frame
> 
> ### ** Examples
> 
> obj <- data.frame(treat = 0, resp_ctl = .2, resp_trt = .3, p_trt = .5)
> sensitize(obj, q = .5, dp = log(2), d0 = log(2), d1 = log(2))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: sensitize ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rnumerai’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘roadoi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘roahd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROAuth’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘robcbi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/robeth/libs/robeth.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/robeth/libs/robeth.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘robeth’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/robeth/libs/robeth.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/robeth/libs/robeth.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘robets’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: distrMod
Loading required package: distr
Loading required package: startupmsg
:startupmsg>  Utilities for Start-Up Messages (version 0.9.5)
:startupmsg> 
:startupmsg>  For more information see ?"startupmsg",
:startupmsg>  NEWS("startupmsg")

Loading required package: sfsmisc
Error: package or namespace load failed for ‘distr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘distr’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘robis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘robmixglm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Robocoap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘using_robotstxt.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: GSE
Loading required package: Rcpp
Error: package or namespace load failed for ‘Rcpp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘Rcpp’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: ROptRegTS
Loading required package: ROptEstOld
Loading required package: distr
Loading required package: startupmsg
:startupmsg>  Utilities for Start-Up Messages (version 0.9.5)
:startupmsg> 
:startupmsg>  For more information see ?"startupmsg",
:startupmsg>  NEWS("startupmsg")

Loading required package: sfsmisc
Error: package or namespace load failed for ‘distr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘distr’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘robustarima’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/splusTimeDate/libs/splusTimeDate.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/splusTimeDate/libs/splusTimeDate.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘robustbase’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/robustbase/libs/robustbase.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/robustbase/libs/robustbase.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RobustCalibration’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘robustETM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/robustETM/libs/robustETM.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/robustETM/libs/robustETM.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RobustGaSP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘robustloggamma’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/robustbase/libs/robustbase.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/robustbase/libs/robustbase.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘robustrao’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gmp/libs/gmp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gmp/libs/gmp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: fit.models
Error: package or namespace load failed for ‘fit.models’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘fit.models’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘robustreg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘robustvarComp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/robustbase/libs/robustbase.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/robustbase/libs/robustbase.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘robustX’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/robustbase/libs/robustbase.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/robustbase/libs/robustbase.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rockchalk’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RockFab’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rococo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rocsvm.path’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: splines
Loading required package: date
Error: package or namespace load failed for ‘date’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/date/libs/date.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/date/libs/date.so: failed to map segment from shared object
Error: package ‘date’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RODBCDBI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RODBC/libs/RODBC.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RODBC/libs/RODBC.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RODBC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RODBC/libs/RODBC.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RODBC/libs/RODBC.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rodd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rodeo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/deSolve/libs/deSolve.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/deSolve/libs/deSolve.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Comparison.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘how-to.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.models.globalOptTests’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.models.miplib’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.models.netlib’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.alabama’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.clp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.cplex’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.deoptim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.ecos’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.glpk’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.ipop’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.lpsolve’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.msbinlp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.neos’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.nloptr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.optimx’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.qpoases’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.quadprog’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.scs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.symphony’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rollmatch’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rollply’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘roll’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rollRegres’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: roloc
Error: package or namespace load failed for ‘roloc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/colorspace/libs/colorspace.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/colorspace/libs/colorspace.so: failed to map segment from shared object
Error: package ‘roloc’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘roloc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/colorspace/libs/colorspace.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/colorspace/libs/colorspace.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROlogit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘rolr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: rhier
> ### Title: Finding Optimal Cutpoints Using a Hierarchical Method
> ### Aliases: rhier
> 
> ### ** Examples
> 
> library(rolr)
> 
> #simulate data with true underlying cutpoints and hazard goes up as covariate goes up
> d=simdata(nn = 150, hr = c(1, 2, 3), hazard.func = "step",
+           props=c(1/3, 1/3, 1/3), censoring.rate = 0)
> 
> #finding optimal cutpoints using alt = 'decrease' option
> res=rhier(times=d$times, status=d$status, x=d$x, ns=15, alt='decrease')
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: rhier ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rolypoly’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: MortalitySmooth
Loading required package: svcm
Loading required package: Matrix
Error: package or namespace load failed for ‘Matrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘Matrix’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RonFHIR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rook’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rook/libs/Rook.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rook/libs/Rook.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rootSolve’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rootSolve/libs/rootSolve.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rootSolve/libs/rootSolve.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘roots’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rootWishart’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ropenaq’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROpenDota’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROpenFIGI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROpenWeatherMap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘nicer_roperators_v1_1_0.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ropercenter’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running ‘tests.R’ [27s/27s]
Running the tests in ‘tests/tests.R’ failed.
Complete output:
  > library(rope)
  > 
  > testres <- function(res) {
  +   if (dim(res$selection)[1] != 2) {
  +     stop('nrow of selection should be equal to number of fdr targets')
  +   }
  +   if (dim(res$selection)[2] != 1128) {
  +     stop('width of selection should be equal to width of input')
  +   }
  +   if (length(res$q) != 1128) {
  +     stop('length of q should be equal to width of input')
  +   }
  +   if (min(res$selection) != 0 || max(res$selection) != 1 ||
  +       sum(res$selection[1, ]) <= 0 || sum(res$selection[1, ]) >= 1128 ||
  +       any(!is.logical(res$selection))) {
  +     stop('selection does not make sense')
  +   }
  +   if (min(res$q) < 0 || max(res$q) > 1 || sum(res$q) <= 0 || sum(res$q) >= 1128) {
  +     stop('q does not make sense')
  +   }
  +   if (any(res$q[1001:1128] > 0.1) || sum(res$q[1:1000] < 0.15) > 10) {
  +     stop('q is too bad')
  +   }
  + }
  > 
  > # test basic use
  > set.seed(1)
  > x <- t(sapply(c(0.01, 0.05, 0.1),
  +   function(p) c(rbinom(1000, 50, p), rbinom(128, 50, 0.99))))
  > res <- rope(x, 50, c(0.1, 0.2), mc.cores=1)
  > testres(res)
  > 
  > # test with sparse input
  > y <- Matrix::Matrix(x, sparse=TRUE)
  Error in dyn.load(file, DLLpath = DLLpath, ...) : 
    unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so':
    /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
  Calls: :: ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: fastdigest
Error: package or namespace load failed for ‘fastdigest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/fastdigest/libs/fastdigest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/fastdigest/libs/fastdigest.so: failed to map segment from shared object
Error: package ‘fastdigest’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROptimizely’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘roptim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: ROptEstOld
Loading required package: distr
Loading required package: startupmsg
:startupmsg>  Utilities for Start-Up Messages (version 0.9.5)
:startupmsg> 
:startupmsg>  For more information see ?"startupmsg",
:startupmsg>  NEWS("startupmsg")

Loading required package: sfsmisc
Error: package or namespace load failed for ‘distr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘distr’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROptSpace’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rorcid’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rospca’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/geometry/libs/geometry.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/geometry/libs/geometry.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rosqp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rotationForest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rpart/libs/rpart.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rpart/libs/rpart.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rotl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘routr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘roxygen2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rPackedBar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpact’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rpact/libs/rpact.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rpact/libs/rpact.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: picante
Loading required package: ape
Error: package or namespace load failed for ‘ape’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘ape’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: hash
hash-2.2.6 provided by Decision Patterns

Error: package or namespace load failed for ‘rpartitions’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rpartitions/libs/rpartitions.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rpartitions/libs/rpartitions.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpart’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rpart/libs/rpart.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rpart/libs/rpart.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpatrec’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpcdsearch’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Running examples in ‘rpdo-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: pdo
> ### Title: Pacific Decadal Oscillation Index
> ### Aliases: pdo
> ### Keywords: datasets
> 
> ### ** Examples
> 
> library(rpdo)
> library(ggplot2)
Error: package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘RPEXE.RPEXT.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: parallel
Error: package or namespace load failed for ‘rpf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rpf/libs/rpf.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rpf/libs/rpf.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpgm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rpgm/libs/rpgm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rpgm/libs/rpgm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RApiSerialize/libs/RApiSerialize.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RApiSerialize/libs/RApiSerialize.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  bgc_hmm.c:241:31: warning: ‘, ’ directive writing 2 bytes into a region of size between 1 and 10000 [-Wformat-overflow=]
  rph_tfbs.c:371:11: warning: ‘strncpy’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation]
  rph_tfbs.c:351:11: warning: ‘strncpy’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation]
  rph_tfbs.c:819:5: warning: ‘strncpy’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation]
See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/rphast.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rphast’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rphast/libs/rphast.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rphast/libs/rphast.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rphylopic’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpicosat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rpicosat/libs/rpicosat.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rpicosat/libs/rpicosat.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpinterest’:
 .onLoad failed in loadNamespace() for ‘rjson’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rjson/libs/rjson.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rjson/libs/rjson.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpivotTable’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rplos’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpms’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running ‘test-all.R’ [0s/0s]
Running the tests in ‘tests/test-all.R’ failed.
Complete output:
  > #' @import testthat
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Rpoet_Introduction.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rpolyhedra’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rpoppler’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rpoppler/libs/Rpoppler.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rpoppler/libs/Rpoppler.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: truncdist
Loading required package: stats4
Loading required package: evd
Error: package or namespace load failed for ‘evd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/evd/libs/evd.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/evd/libs/evd.so: failed to map segment from shared object
Error: package ‘evd’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: DBI
Loading required package: RPostgreSQL
Error: package or namespace load failed for ‘RPostgreSQL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RPostgreSQL/libs/RPostgreSQL.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RPostgreSQL/libs/RPostgreSQL.so: failed to map segment from shared object
Error: package ‘RPostgreSQL’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: DBI
Error: package or namespace load failed for ‘RPostgreSQL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RPostgreSQL/libs/RPostgreSQL.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RPostgreSQL/libs/RPostgreSQL.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RPostgres’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RPPanalyzer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rppo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpql’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Running examples in ‘rPraat-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: it.sample
> ### Title: it.sample
> ### Aliases: it.sample
> 
> ### ** Examples
> 
> it <- it.sample()
> it.plot(it)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Calls: it.plot ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rPref’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RPresto’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rprime’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rprintf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rprofet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rprojroot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/backports/libs/backports.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/backports/libs/backports.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RProtoBuf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpsftm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RPS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpst’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RPtests’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘rptR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: rpt
> ### Title: Repeatability Estimation for Gaussian and Non-Gaussian Data
> ### Aliases: rpt
> ### Keywords: models
> 
> ### ** Examples
> 
> # load data
> data(BeetlesBody)
> data(BeetlesMale)
> data(BeetlesFemale)
> 
> #  prepare proportion data
> BeetlesMale$Dark <- BeetlesMale$Colour
> BeetlesMale$Reddish <- (BeetlesMale$Colour-1)*-1
> BeetlesColour <- aggregate(cbind(Dark, Reddish) ~ Treatment + Population + Container, 
+      data=BeetlesMale, FUN=sum)
> 
> # Note: nboot and npermut are set to 0 for speed reasons. Use larger numbers
> # for the real analysis.
> 
> # gaussian data (example with a single random effect)
> rpt(BodyL ~ (1|Population), grname="Population", data=BeetlesBody, 
+      nboot=0, npermut=0, datatype = "Gaussian")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: rpt ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘rptR.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpubchem’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RPublica’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RPushbullet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘RPyGeo.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rquery
Error: package or namespace load failed for ‘rqdatatable’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘CoupledHarmonics.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: reticulate
Error: package or namespace load failed for ‘reticulate’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘reticulate’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rquake’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rwave/libs/Rwave.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rwave/libs/Rwave.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RQuantLib’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘AssigmentPartitioner.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rr2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rraven’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: ThreeWay
Loading required package: rrcov
Loading required package: robustbase
Error: package or namespace load failed for ‘robustbase’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/robustbase/libs/robustbase.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/robustbase/libs/robustbase.so: failed to map segment from shared object
Error: package ‘robustbase’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rrdrand’:
 .onLoad failed in loadNamespace() for ‘Rrdrand’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rrdrand/libs/Rrdrand.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rrdrand/libs/Rrdrand.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rrd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: registry
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rredis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rredis/libs/rredis.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rredis/libs/rredis.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rredlist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘rrefine-vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rreg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rres’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RRF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RRF/libs/RRF.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RRF/libs/RRF.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rriskDistributions’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: pcaPP
Error: package or namespace load failed for ‘pcaPP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Error: package ‘pcaPP’ could not be loaded
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘RoadFeatures.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rrpack’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RRphylo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Collyer.Adams.2018.MEE.Appendix.S2.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RRreg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rrr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘R.rsp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rrtable’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/devEMF/libs/devEMF.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/devEMF/libs/devEMF.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RRTCS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsae’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rsae/libs/rsae.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rsae/libs/rsae.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSAlgaeR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tidyr
Error: package or namespace load failed for ‘tidyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Error: package ‘tidyr’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rsampletrees’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘RRR.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘rsatscan.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RGtk2/libs/RGtk2.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RGtk2/libs/RGtk2.so: failed to map segment from shared object
Error: package or namespace load failed for ‘RSCABS’:
 .onLoad failed in loadNamespace() for ‘RGtk2’, details:
  call: install_all()
  error: This platform is not yet supported by the automatic installer. Please install GTK+ manually, if necessary. See: http://www.gtk.org
In addition: Warning message:
Failed to load RGtk2 dynamic library, attempting to install it. 
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rscimark’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/checkmate/libs/checkmate.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/checkmate/libs/checkmate.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSclient’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RSclient/libs/RSclient.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RSclient/libs/RSclient.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rscopus’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rscorecard’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSDA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/leaps/libs/leaps.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/leaps/libs/leaps.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsdepth’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rsdepth/libs/rsdepth.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rsdepth/libs/rsdepth.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsdmx’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: hommel
Error: package or namespace load failed for ‘hommel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘hommel’ could not be loaded
Execution halted
Running examples in ‘rsed-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: as.stream
> ### Title: Converts a character vector to an object of class "stream"
> ### Aliases: as.stream print.stream
> 
> ### ** Examples
> 
> aStream <- c("string1", "string2", "string3")
> aStream
[1] "string1" "string2" "string3"
> 
> # Note how it prints after we convert it to a stream object:
> as.stream(aStream)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Smisc/libs/Smisc.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Smisc/libs/Smisc.so: failed to map segment from shared object
Calls: as.stream ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Running ‘testthat.R’ [0s/0s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # setting R_TESTS to empty string because of
  > # https://github.com/hadley/testthat/issues/144
  > # https://github.com/hadley/testthat/issues/86
  > # revert this when that issue in R is fixed.
  > Sys.setenv("R_TESTS" = "")
  > 
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSEIS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rwave/libs/Rwave.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rwave/libs/Rwave.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSelenium’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Running examples in ‘RSentiment-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: calculate_custom_score
> ### Title: Calculate the score of sentences
> ### Aliases: calculate_custom_score
> 
> ### ** Examples
> 
> calculate_custom_score("This is good",c("good"),c("bad"),1)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: calculate_custom_score ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rserve’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rserve/libs/Rserve.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rserve/libs/Rserve.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rSFA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Depends: includes the non-default packages:
  ‘biwt’ ‘cairoDevice’ ‘fBasics’ ‘gplots’ ‘gWidgets’ ‘gWidgetsRGtk2’
  ‘minerva’ ‘parmigene’ ‘stringr’ ‘snowfall’
Adding so many packages to the search path is excessive and importing
selectively is preferable.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: biwt
Loading required package: rrcov
Loading required package: robustbase
Error: package or namespace load failed for ‘robustbase’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/robustbase/libs/robustbase.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/robustbase/libs/robustbase.so: failed to map segment from shared object
Error: package ‘robustbase’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSiena’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘RsimMosaic-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: RsimMosaic-package
> ### Title: R Simple IMage Mosaic creation library
> ### Aliases: RsimMosaic-package RsimMosaic
> ### Keywords: package
> 
> ### ** Examples
> 
> # This example will transform an image of the Moon into a mosaic
> # composed by objects from the Messier catalogue. The tiles were
> # created from the images of the 2MASS catalogue.
> # 
> # Set the filename of the original image
> #origImgFileN <- system.file("extdata", "verySmallMoon.jpg", package="RsimMosaic") 
> origImgFileN <- system.file("extdata", "reallyVerySmallMoon.jpg", package="RsimMosaic") 
> 
> # Set the folder where the tiles library is located
> pathToTileLib <- system.file("extdata/2Massier", package="RsimMosaic")
> 
> # Set the filename of the output image (the mosaic!)
> outImgFileN <- file.path(tempdir(), "verySmallMoon-2MASS-Mosaic.jpg")
> 
> # Create the mosaic
> composeMosaicFromImageRandom(origImgFileN, outImgFileN, pathToTileLib, removeTiles=FALSE)

 ------------------------------------------------ 
    R Simple Mosaic composer - random version   
 ------------------------------------------------ 

    Creating the library... 
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jpeg/libs/jpeg.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jpeg/libs/jpeg.so: failed to map segment from shared object
Calls: composeMosaicFromImageRandom ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsimsum’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/checkmate/libs/checkmate.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/checkmate/libs/checkmate.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsinaica’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSiteCatalyst’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Running examples in ‘rslp-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: apply_rules
> ### Title: Apply rules
> ### Aliases: apply_rules
> 
> ### ** Examples
> 
> steprules <- readRDS(system.file("steprules.rds", package = "rslp"))
> rslp:::apply_rules("balões", name = "Plural", steprules)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: <Anonymous> ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘rslurm.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rsmlx’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsMove’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSNPset’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/fastmatch/libs/fastmatch.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/fastmatch/libs/fastmatch.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsnps’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSocrata’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Running ‘testthat.R’ [0s/1s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rsolnp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/truncnorm/libs/truncnorm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/truncnorm/libs/truncnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: ‘BiocGenerics’

The following objects are masked from ‘package:parallel’:

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from ‘package:stats’:

    IQR, mad, sd, var, xtabs

The following objects are masked from ‘package:base’:

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, basename, cbind, colMeans, colSums, colnames,
    dirname, do.call, duplicated, eval, evalq, get, grep, grepl,
    intersect, is.unsorted, lapply, lengths, mapply, match, mget,
    order, paste, pmax, pmax.int, pmin, pmin.int, rank, rbind,
    rowMeans, rowSums, rownames, sapply, setdiff, sort, table, tapply,
    union, unique, unsplit, which, which.max, which.min

Error: package or namespace load failed for ‘rsolr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rspa’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lintools/libs/lintools.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lintools/libs/lintools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rSPARCS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/foreign/libs/foreign.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/foreign/libs/foreign.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsparkling’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Rspc.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSpectra’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsppfp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSPS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSQLite’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rSQM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsq’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: svd
Error: package or namespace load failed for ‘svd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/svd/libs/svd.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/svd/libs/svd.so: failed to map segment from shared object
Error: package ‘svd’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSSL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘developer-guidelines.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RStata’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/foreign/libs/foreign.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/foreign/libs/foreign.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rstatscn’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rstiefel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rstiefel/libs/rstiefel.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rstiefel/libs/rstiefel.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RStoolbox’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  RngStreams.c:332:4: warning: ‘strncpy’ specified bound depends on the length of the source argument [-Wstringop-overflow=]
See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/rstream.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rstream’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rstream/libs/rstream.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rstream/libs/rstream.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RStripe’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘dialogs.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSuite’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsunlight’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rsurrogate’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘RSurveillance-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: adj.risk.sim
> ### Title: Adjusted risk for simulation models
> ### Aliases: adj.risk.sim
> ### Keywords: methods
> 
> ### ** Examples
> 
> # examples for adj.risk.sim
> its<- 10
> risk.cat<- 3
> rr<- matrix(0, nrow=its, ncol=risk.cat)
> rr[,1]<- mc2d::rpert(its, 5,10,20)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Calls: :: ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
The RSurvey GUI is launched only in interactive sessions.
Error: package or namespace load failed for ‘RSurvey’:
 .onAttach failed in attachNamespace() for ‘RSurvey’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsvd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSvgDevice’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RSvgDevice/libs/RSvgDevice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RSvgDevice/libs/RSvgDevice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsvg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rsvg/libs/rsvg.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rsvg/libs/rsvg.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSVGTipsDevice’:
 .onLoad failed in loadNamespace() for ‘RSVGTipsDevice’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RSVGTipsDevice/libs/RSVGTipsDevice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RSVGTipsDevice/libs/RSVGTipsDevice.so: failed to map segment from shared object
Execution halted
Running examples in ‘RSwissMaps-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: can.plot
> ### Title: Plotting canton-level maps of Switzerland
> ### Aliases: can.plot
> 
> ### ** Examples
> 
>  # Generating sample data:
>  dt <- can.template(2016)
>  for(i in 1:nrow(dt)){dt$values[i] <- sample(c(300:700), 1)/1000}
> 
>  # Plotting sample data:
>  can.plot(dt$bfs_nr, dt$values, 2016)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: can.plot ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rsymphony’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rsymphony/libs/Rsymphony.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rsymphony/libs/Rsymphony.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rJython
Loading required package: rJava
Error: package or namespace load failed for ‘rJava’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Error: package ‘rJava’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsyslog’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rsyslog/libs/rsyslog.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rsyslog/libs/rsyslog.so: failed to map segment from shared object
Execution halted
Running ‘test-EPD.R’ [1s/1s]
  Running ‘test-EUstockmarket.R’ [0s/0s]
  Running ‘test-FGM.R’ [1s/1s]
  Running ‘test-MDPD.R’ [0s/0s]
  Running ‘test-RTDE.R’ [1s/1s]
  Running ‘test-dataRTDE.R’ [0s/0s]
  Running ‘test-fitRTDE.R’ [2s/2s]
  Running ‘test-frank.R’ [0s/0s]
  Running ‘test-frechet.R’ [0s/0s]
  Running ‘test-multRTDE.R’ [4s/5s]
  Running ‘test-zvalue.R’ [0s/0s]
Running the tests in ‘tests/test-EUstockmarket.R’ failed.
Complete output:
  > data(EuStockMarkets)
  > 
  > 
  > library(RTDE)
  Loading required package: parallel
  > library(tseries)
  Error: package or namespace load failed for 'tseries' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so':
    /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rtdists’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rtematres’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: KoNLP
Error: package or namespace load failed for ‘KoNLP’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Error: package ‘KoNLP’ could not be loaded
Execution halted
Found the following significant warnings:
  bgc_hmm.c:241:31: warning: ‘, ’ directive writing 2 bytes into a region of size between 1 and 10000 [-Wformat-overflow=]
  rph_tfbs.c:371:11: warning: ‘strncpy’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation]
  rph_tfbs.c:351:11: warning: ‘strncpy’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation]
  rph_tfbs.c:819:5: warning: ‘strncpy’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation]
See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/rtfbs.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rtfbs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtfbs/libs/rtfbs.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtfbs/libs/rtfbs.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...

Error: processing vignette ‘rtf.Rnw’ failed with diagnostics:
 chunk 29 
Error : package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rticles’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘rtide-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: tide_datetimes
> ### Title: Tide Date Times
> ### Aliases: tide_datetimes
> 
> ### ** Examples
> 
> tide_datetimes()
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: tide_datetimes ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: pixmap
Error: package or namespace load failed for ‘rtiff’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtiff/libs/rtiff.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtiff/libs/rtiff.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Could not find Java.
Type ?tika for Java installation tips.
Error: package or namespace load failed for ‘rtika’:
 .onAttach failed in attachNamespace() for ‘rtika’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rappdirs/libs/rappdirs.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rappdirs/libs/rappdirs.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rtimes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rtimicropem’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rtk’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RTOMO’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/dotCall64/libs/dotCall64.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/dotCall64/libs/dotCall64.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RTransferEntropy’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RTransProb’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘rtrek-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: st_book_series
> ### Title: Go to Wikipedia entry for a specific book series
> ### Aliases: st_book_series
> 
> ### ** Examples
> 
> st_book_series()
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: st_book_series ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘rr.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RTriangle’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RTriangle/libs/RTriangle.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RTriangle/libs/RTriangle.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rtsne’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘rtsplot-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: rtsplot
> ### Title: 'rtsplot' - Time series plot with base R Graphics.
> ### Aliases: rtsplot rtsplot-package
> 
> ### ** Examples
> 
> # generate time series data
> y = rtsplot.fake.stock.data(1000)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: rtsplot.fake.stock.data ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RtutoR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/randomForest/libs/randomForest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/randomForest/libs/randomForest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rtweet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rtypeform’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rubias’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Ruchardet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: KFAS
Error: package or namespace load failed for ‘KFAS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/KFAS/libs/KFAS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/KFAS/libs/KFAS.so: failed to map segment from shared object
Error: package ‘KFAS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rucrdtw’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: parallel
Error: package or namespace load failed for ‘rugarch’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/truncnorm/libs/truncnorm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/truncnorm/libs/truncnorm.so: failed to map segment from shared object
Execution halted
Running examples in ‘ruin-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot_path
> ### Title: Plot a path of the simulated ruin process
> ### Aliases: plot_path
> 
> ### ** Examples
> 
> model <- CramerLundberg(initial_capital = 10,
+                         premium_rate = 1,
+                         claim_poisson_arrival_rate = 1,
+                         claim_size_generator = rexp,
+                         claim_size_parameters = list(rate = 1))
> 
> path <- simulate_path(model = model, max_time_horizon = 10)
> 
> plot_path(path)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: plot_path ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘ruin-intro.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ruler’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rUnemploymentData’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘runittotestthat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘runjags’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘runner’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Runuran’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Runuran/libs/Runuran.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Runuran/libs/Runuran.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rusda’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rusk’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rust’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ruta’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Running examples in ‘R.utils-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: touchFile
> ### Title: Updates the timestamp of a file
> ### Aliases: touchFile.default touchFile
> ### Keywords: programming IO file
> 
> ### ** Examples
> 
> # 1. Create a file
> pathname <- tempfile()
> cat(file=pathname, "Hello world!")
> md5a <- digest::digest(pathname, file=TRUE)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Calls: :: ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ruv’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘RVAideMemoire-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: CDA.test
> ### Title: Significance test for CDA
> ### Aliases: CDA.test
> 
> ### ** Examples
> 
> require(ade4)
Loading required package: ade4
Error: package or namespace load failed for ‘ade4’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
> data(perthi02)
Warning in data(perthi02) : data set ‘perthi02’ not found
> 
> CDA.test(perthi02$tab,perthi02$cla)
Error in is.data.frame(X) : object 'perthi02' not found
Calls: CDA.test -> is.data.frame
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rvalues’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rvalues/libs/rvalues.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rvalues/libs/rvalues.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rvcg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rvcheck’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rversions’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rvertnet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/maps/libs/maps.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/maps/libs/maps.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RVFam’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bdsmatrix/libs/bdsmatrix.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bdsmatrix/libs/bdsmatrix.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rvg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rvgtest’:
 .onLoad failed in loadNamespace() for ‘rvgtest’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rvgtest/libs/rvgtest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rvgtest/libs/rvgtest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rvinecopulib’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Rvmmin.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rvoterdistance’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RVowpalWabbit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘rwars-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: get_all_planets
> ### Title: Retrieve Data about Every DB Entry in a Class
> ### Aliases: all_entries get_all_films get_all_people get_all_planets
> ###   get_all_species get_all_starships get_all_vehicles
> 
> ### ** Examples
> 
> #Retrieve all planets, parsing
> planets <- get_all_planets(parse_result = TRUE)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Calls: get_all_planets ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘rwars.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘rwavelet-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: DownDyadHi
> ### Title: Hi-Pass Downsampling operator (periodized)
> ### Aliases: DownDyadHi
> 
> ### ** Examples
> 
> qmf <- MakeONFilter('Haar')
> x <- MakeSignal('HeaviSine',2^3)
> DownDyadHi(x, qmf)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: DownDyadHi ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘rwaveletvignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rwave’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rwave/libs/Rwave.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rwave/libs/Rwave.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rWBclimate’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RWDataPlyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: fpc
Error: package or namespace load failed for ‘fpc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘fpc’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RWekajars’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RWeka’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rwfec’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rwhois’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RWiener’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RWiener/libs/RWiener.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RWiener/libs/RWiener.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rWind’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rWishart’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rwt’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rwt/libs/rwt.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rwt/libs/rwt.so: failed to map segment from shared object
Execution halted
Running examples in ‘rwunderground-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: set_location
> ### Title: Specifies location of request
> ### Aliases: set_location
> 
> ### ** Examples
> 
> set_location(zip_code = "90210")
[1] "90210"
> set_location(territory = "Hawaii", city = "Honolulu")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: set_location ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RXKCD’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RJSONIO/libs/RJSONIO.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RJSONIO/libs/RJSONIO.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RxnSim’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RxODE’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/PreciseSums/libs/PreciseSums.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/PreciseSums/libs/PreciseSums.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rxylib’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Ryacas’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RYandexTranslate’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rym’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ryouready’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rYoutheria’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: soiltexture
Error: package or namespace load failed for ‘soiltexture’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘soiltexture’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RZabbix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rzeit2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RZigZag’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rzmq’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rzmq/libs/rzmq.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rzmq/libs/rzmq.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RZooRoH’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  geometry/s2loop.cc:85:73: warning: ‘void* memcpy(void*, const void*, size_t)’ writing to an object of type ‘S2Point’ {aka ‘class Vector3<double>’} with no trivial copy-assignment; use copy-assignment or copy-initialization instead [-Wclass-memaccess]
  geometry/s2loop.cc:247:73: warning: ‘void* memcpy(void*, const void*, size_t)’ writing to an object of type ‘S2Point’ {aka ‘class Vector3<double>’} with no trivial copy-assignment; use copy-assignment or copy-initialization instead [-Wclass-memaccess]
  geometry/s2polyline.cc:52:73: warning: ‘void* memcpy(void*, const void*, size_t)’ writing to an object of type ‘S2Point’ {aka ‘class Vector3<double>’} with no trivial copy-assignment; use copy-assignment or copy-initialization instead [-Wclass-memaccess]
  geometry/s2polyline.cc:94:73: warning: ‘void* memcpy(void*, const void*, size_t)’ writing to an object of type ‘S2Point’ {aka ‘class Vector3<double>’} with no trivial copy-assignment; use copy-assignment or copy-initialization instead [-Wclass-memaccess]
  geometry/s2regioncoverer.cc:119:28: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct S2RegionCoverer::Candidate’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess]
See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/s2.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘s2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sabre’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SACCR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Running examples in ‘SACOBRA-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: multiCOBRA
> ### Title: Perform multiple COBRA runs
> ### Aliases: multiCOBRA
> 
> ### ** Examples
> 
> ## solve G11 problem nrun times  and plot the results of all nrun runs
> nrun=4
> feval=30
> 
> ## Defining the constraint problem: G11
> fn <- function(x) {
+   y<-x[1]*x[1]+((x[2]-1)^2)
+   y<-as.numeric(y)
+ 
+   g1 <- as.numeric(+(x[2] - x[1]^2))
+ 
+   return(c(objective=y, g1=g1))
+ }
> funcName="G11"
> d=2
> nConstraints<-1
> lower<-c(-1,-1)
> upper<-c(+1,+1)
> 
> ## Initializing and running cobra
> cobra <- cobraInit(xStart=c(0,0), fn=fn, fName=funcName, lower=lower, upper=upper,
+                    nConstraints=nConstraints,  feval=feval,
+                    initDesPoints=3*d, DOSAC=1,cobraSeed=1)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: cobraInit ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Running examples in ‘SADISA-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: SADISA_ML
> ### Title: Performs maximum likelihood parameter estimation for requested
> ###   model
> ### Aliases: SADISA_ML
> ### Keywords: model species-abundance-distribution
> 
> ### ** Examples
> 
> utils::data(datasets);
> utils::data(fitresults);
> result <- SADISA_ML(
+    abund = datasets$dset1.abunvec[[1]],
+    initpars = fitresults$fit1a.parsopt[[1]],
+    labelpars = c(1,1),
+    model = c('pm','dl'),
+    tol = c(1E-1, 1E-1, 1E-1)
+    );
The loglikelihood for the initial parameter values is -317.7003.
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/deSolve/libs/deSolve.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/deSolve/libs/deSolve.so: failed to map segment from shared object
Calls: SADISA_ML ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sadists’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: bbmle
Loading required package: stats4
Error: package or namespace load failed for ‘bbmle’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘bbmle’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: aoos
Error: package or namespace load failed for ‘saeRobust’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘saeSim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SafeBayes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SafeBayes/libs/SafeBayes.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SafeBayes/libs/SafeBayes.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SafeQuant’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Biobase/libs/Biobase.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Biobase/libs/Biobase.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘safer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Running examples in ‘sAIC-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: sAIC
> ### Title: Compute the Akaike information criterion for the lasso in
> ###   generalized linear models
> ### Aliases: sAIC
> ### Keywords: models regression
> 
> ### ** Examples
> 
> library(MASS)
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘salesforcer’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Running examples in ‘salty-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: salt_delete
> ### Title: Delete some characters from some values
> ### Aliases: salt_delete
> 
> ### ** Examples
> 
> x <- c("Lorem ipsum dolor sit amet, consectetur adipiscing elit.",
+        "Nunc finibus tortor a elit eleifend interdum.",
+        "Maecenas aliquam augue sit amet ultricies placerat.")
> 
> salt_delete(x, p = 0.5, n = 5)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: salt_delete ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sambia’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/FNN/libs/FNN.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/FNN/libs/FNN.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SAMCpack’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SAMM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘samon’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/samon/libs/samon.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/samon/libs/samon.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SamplerCompare’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sampler’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘Power-and-sample-size.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘samplesizeCMH-introduction.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SamplingBigData’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SamplingBigData/libs/SamplingBigData.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SamplingBigData/libs/SamplingBigData.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: pps
Loading required package: sampling
Error: package or namespace load failed for ‘sampling’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘sampling’ could not be loaded
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘my-vignette.Rnw’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: samplingVarEst
Error: package or namespace load failed for ‘samplingVarEst’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/samplingVarEst/libs/samplingVarEst.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/samplingVarEst/libs/samplingVarEst.so: failed to map segment from shared object
Error: package ‘samplingVarEst’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sampling’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘samplingVarEst’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/samplingVarEst/libs/samplingVarEst.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/samplingVarEst/libs/samplingVarEst.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: splines
Error: package or namespace load failed for ‘SAM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SAM/libs/SAM.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SAM/libs/SAM.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘samr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SAMUR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sandwich’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SanFranBeachWater’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sanitizers’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sanitizers/libs/sanitizers.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sanitizers/libs/sanitizers.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘santaR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SanzCircos’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sapa’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/splus2R/libs/splus2R.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/splus2R/libs/splus2R.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SAPP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SAPP/libs/SAPP.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SAPP/libs/SAPP.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sars’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sasMap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Loading required package: Matrix
Error: package or namespace load failed for ‘Matrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Matrix/libs/Matrix.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Matrix/libs/Matrix.so: failed to map segment from shared object

Error: processing vignette ‘Usinglmer.Rnw’ failed with diagnostics:
 chunk 1 (label = preliminaries) 
Error : package ‘Matrix’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SASxport’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘satscanMapper’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘saturnin’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SAVE’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘saver-tutorial.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sazedR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sbart’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sBIC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sbioPN’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sbioPN/libs/sbioPN.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sbioPN/libs/sbioPN.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘sbl.tutorial.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sbmSDP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sboost’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sbpiper’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sbrl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SBSA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sbtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scaleboot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scales’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scalpel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scan’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scanstatistics’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scape’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/scar/libs/scar.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/scar/libs/scar.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SCAT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SCAT/libs/SCAT.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SCAT/libs/SCAT.so: failed to map segment from shared object
Execution halted
Running examples in ‘scatr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: scat
> ### Title: Scatterplot
> ### Aliases: scat
> 
> ### ** Examples
> 
> set.seed(1337)
> 
> X <- rnorm(100)
> Y <- 0.5*X + rnorm(100)
> dat <- data.frame(X = X, Y = Y)
> 
> scat(dat, x = 'X', y = 'Y', line = 'linear', se = TRUE, marg = 'dens')
Loading required namespace: jmvcore
Failed with error:  ‘.onLoad failed in loadNamespace() for 'rjson', details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rjson/libs/rjson.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rjson/libs/rjson.so: failed to map segment from shared object’
Error in scat(dat, x = "X", y = "Y", line = "linear", se = TRUE, marg = "dens") : 
  scat requires jmvcore to be installed (restart may be required)
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scatterD3’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘scBio-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: CPM
> ### Title: The Cellular Population Mapping (CPM) algorithm.
> ### Aliases: CPM
> 
> ### ** Examples
> 
> data(SCLabels)
> data(SCFlu)
> data(BulkFlu)
> data(SCCellSpace)
> 
> # Creating relative bulk data (Infleunza infection compared to PBS):
> BulkFluReduced = BulkFlu - rowMeans(BulkFlu[,grep("pbs",colnames(BulkFlu))])
> BulkFluReduced = BulkFluReduced[,grep("flu",colnames(BulkFluReduced))]
> 
> # Running CPM using only a single cell-type:
> oneCellTypeIndexes = which(SCLabels == "MPS")
> res = CPM(SCData = SCFlu[,oneCellTypeIndexes], SCLabels = SCLabels[oneCellTypeIndexes],
+           BulkData = BulkFluReduced, cellSpace = SCCellSpace[oneCellTypeIndexes,], no_cores = 2)
[1] "Selecting cells for each iteration"
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: CPM ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SCBmeanfd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/KernSmooth/libs/KernSmooth.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/KernSmooth/libs/KernSmooth.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SCCS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘scdensity-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot.scdensity
> ### Title: Plot method for class 'scdensity'.
> ### Aliases: plot.scdensity
> 
> ### ** Examples
> 
> # Basic usage:
> x <- rlnorm(30)
> scKDE <- scdensity(x)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lpSolve/libs/lpSolve.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lpSolve/libs/lpSolve.so: failed to map segment from shared object
Calls: scdensity ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘buildtree.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SCGLR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SchemaOnRead’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jpeg/libs/jpeg.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jpeg/libs/jpeg.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scholar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘schumaker.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scientoText’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Visualizing_Scientific_Replication.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  Warning: ‘__var_1_mmb.offset’ is used uninitialized in this function [-Wuninitialized]
See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/scio.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scio’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/scio/libs/scio.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/scio/libs/scio.so: failed to map segment from shared object
Execution halted
Running examples in ‘SciViews-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: panels
> ### Title: More panel plots.
> ### Aliases: panels panel_reg panel.reg panel_ellipse panel.ellipse
> ###   panel_cor panel.cor panel_smooth
> ### Keywords: aplot
> 
> ### ** Examples
> 
> # Smooth lines in lower graphs and straight lines in upper graphs
> pairs(trees, lower.panel = panel_smooth, upper.panel = panel_reg)
> # Robust regression lines
> library(MASS)  # For rlm()
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: RImageJROI
Error: package or namespace load failed for ‘RImageJROI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so: failed to map segment from shared object
Error: package ‘RImageJROI’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scmamp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scorecardModelUtils’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scorecard’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scorer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scoringRules’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SCORPIUS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scout’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/scout/libs/scout.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/scout/libs/scout.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scPDSI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running ‘impossible.points-test.R’ [0s/0s]
  Running ‘is.twl06.word-tests.R’ [0s/0s]
  Running ‘sls-tests.R’ [0s/0s]
  Running ‘sws-tests.R’ [0s/0s]
Running the tests in ‘tests/impossible.points-test.R’ failed.
Complete output:
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Running the tests in ‘tests/is.twl06.word-tests.R’ failed.
Complete output:
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Running the tests in ‘tests/sls-tests.R’ failed.
Complete output:
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Running the tests in ‘tests/sws-tests.R’ failed.
Complete output:
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scraEP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ScreenClean’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘scriptexec-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: execute
> ### Title: Executes a script and returns the output. The stdout and stderr
> ###   are captured and returned. In case of errors, the exit code will
> ###   return in the status field.
> ### Aliases: execute
> 
> ### ** Examples
> 
> library('scriptexec')
> library('testthat')
Error: package or namespace load failed for ‘testthat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘scriptexec.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scriptName’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scrm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: foreach
Error: package or namespace load failed for ‘scRNAtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scrubr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sctransform’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scuba’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/scuba/libs/scuba.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/scuba/libs/scuba.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Loading required package: grid
Loading required package: Matrix
Loading required package: survival
Error: package or namespace load failed for ‘survival’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/survival/libs/survival.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/survival/libs/survival.so: failed to map segment from shared object

Error: processing vignette ‘SDaA_using_survey.Rnw’ failed with diagnostics:
 chunk 2 (label = loadPkg) 
Error : package ‘survival’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SDALGCP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: entropy
Loading required package: corpcor
Loading required package: fdrtool
Error: package or namespace load failed for ‘fdrtool’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/fdrtool/libs/fdrtool.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/fdrtool/libs/fdrtool.so: failed to map segment from shared object
Error: package ‘fdrtool’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sdat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sdat/libs/sdat.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sdat/libs/sdat.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sdcMicro’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SDD’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘SDEFSR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plotRules
> ### Title: Plot a rule set generated by a SDEFSR algorithm
> ### Aliases: plotRules
> 
> ### ** Examples
> 
> plotRules(habermanRules)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: plotRules ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘SDEFSRpackage.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Running examples in ‘SDMPlay-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: SDMtab
> ### Title: Compile species distribution dataset for modelling
> ### Aliases: SDMtab
> 
> ### ** Examples
> 
> #Open occurrence data
> data('ctenocidaris.nutrix')
> occ <- ctenocidaris.nutrix
> 
> #Open environmental descriptors RasterStack
> r <- raster:: stack(system.file('extdata', 'pred.grd',package='SDMPlay'))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sp/libs/sp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sp/libs/sp.so: failed to map segment from shared object
Calls: :: ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SDMTools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SDMTools/libs/SDMTools.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SDMTools/libs/SDMTools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sdmvspecies’:
 .onLoad failed in loadNamespace() for ‘mnormt’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mnormt/libs/mnormt.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mnormt/libs/mnormt.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  catnet_rexport.cpp:221:17: warning: ‘, ’ directive writing 2 bytes into a region of size between 1 and 1024 [-Wformat-overflow=]
  catnet_rexport.cpp:229:15: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=]
  catnet_rexport.cpp:237:16: warning: ‘%d’ directive writing between 1 and 10 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
  catnet_rexport.cpp:240:18: warning: ‘%d’ directive writing between 1 and 11 bytes into a region of size between 1 and 1024 [-Wformat-overflow=]
  catnet_rexport.cpp:241:17: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=]
  catnet_rexport.cpp:258:17: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=]
  catnet_rexport.cpp:257:18: warning: ‘, ’ directive writing 2 bytes into a region of size between 1 and 1024 [-Wformat-overflow=]
See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/sdnet.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sdnet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sdnet/libs/sdnet.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sdnet/libs/sdnet.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sdPrior’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sdprisk’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/PolynomF/libs/PolynomF.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/PolynomF/libs/PolynomF.so: failed to map segment from shared object
Execution halted
Running examples in ‘SDT-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: internalization
> ### Title: Motivation Internalization or Externalization Shares
> ### Aliases: internalization
> ### Keywords: attribute classes models regression
> 
> ### ** Examples
> 
> ## attach dataset to search path (to use variable names)
> attach(learning_motivation)
> 
> ## internal share and external share of identified regulation
> (idr <- internalization(identified, intrinsic, external))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Calls: internalization ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Found the following significant warnings:
  Warning: ‘__var_1_mma.offset’ is used uninitialized in this function [-Wuninitialized]
See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/sdwd.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘seaaroundus’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: oce
Loading required package: testthat
Error: package or namespace load failed for ‘testthat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Error: package ‘testthat’ could not be loaded
Execution halted
Running examples in ‘sealr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: design
> ### Title: Print an R object test result
> ### Aliases: design design_length design_range design_dim design_unique
> ###   design_missings design_levels design_nlevels design_nrow design_ncol
> ###   design_names design_dimnames design_varclass design_class
> 
> ### ** Examples
> 
> design_length(letters)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: design_length ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘sealr1.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘searchable’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘searchConsoleR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SearchTrees’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SearchTrees/libs/SearchTrees.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SearchTrees/libs/SearchTrees.so: failed to map segment from shared object
Execution halted
sh: 1: /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/x13binary/bin/x13ashtml: Permission denied
Warning in system(paste(x13.bin, file.path(tdir, "Testairline")), intern = TRUE) :
  running command ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/x13binary/bin/x13ashtml /tmp/RtmpNwdvBv/Testairline’ had status 126

A namespace must be able to be loaded with just the base namespace
loaded: otherwise if the namespace gets loaded by a saved object, the
session will be unable to start.

Probably some imports need to be declared in the NAMESPACE file.
sh: 1: /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/x13binary/bin/x13ashtml: Permission denied
See section ‘Generic functions and methods’ in the ‘Writing R
Extensions’ manual.
sh: 1: /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/x13binary/bin/x13ashtml: Permission denied
The argument of a replacement function which corresponds to the right
hand side must be named ‘value’.
sh: 1: /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/x13binary/bin/x13ashtml: Permission denied
See chapter ‘System and foreign language interfaces’ in the ‘Writing R
Extensions’ manual.
sh: 1: /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/x13binary/bin/x13ashtml: Permission denied
sh: 1: /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/x13binary/bin/x13ashtml: Permission denied
sh: 1: /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/x13binary/bin/x13ashtml: Permission denied
All user-level objects in a package should have documentation entries.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
sh: 1: /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/x13binary/bin/x13ashtml: Permission denied
sh: 1: /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/x13binary/bin/x13ashtml: Permission denied
sh: 1: /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/x13binary/bin/x13ashtml: Permission denied
sh: 1: /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/x13binary/bin/x13ashtml: Permission denied
The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: seasonal
sh: 1: /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/x13binary/bin/x13ashtml: Permission denied
The binaries provided by 'x13binary' do not work on this
machine. To get more information, run:
  x13binary::checkX13binary()

You can set 'X13_PATH' manually if you intend to use your own
binaries. See ?seasonal for details.

Error: package or namespace load failed for ‘seasonalview’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
In addition: Warning message:
In system(paste(x13.bin, file.path(tdir, "Testairline")), intern = TRUE) :
  running command ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/x13binary/bin/x13ashtml /tmp/RtmpmK9o5q/Testairline’ had status 126
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: JM
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SecKW’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/fdrtool/libs/fdrtool.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/fdrtool/libs/fdrtool.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: SPSL
Error: package or namespace load failed for ‘SPSL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SPSL/libs/SPSL.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SPSL/libs/SPSL.so: failed to map segment from shared object
Error: package ‘SPSL’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘secret’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘secr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘secure’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘securitytxt’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘seeclickfixr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: list_places
> ### Title: Query sub-city neighborhoods in which issues can be reported.
> ### Aliases: list_places
> 
> ### ** Examples
> 
> list_places("Boston, MA",limit = 5)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Calls: list_places ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘seedCCA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SeerMapper2010East’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SeerMapper2010Regs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SeerMapper2010West’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SeerMapperEast’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SeerMapper’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SeerMapperRegs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SeerMapperWest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘seewave’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘segclust2d’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: jointseg
Error: package or namespace load failed for ‘jointseg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/matrixStats/libs/matrixStats.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/matrixStats/libs/matrixStats.so: failed to map segment from shared object
Error: package ‘jointseg’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘segmag’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Segmentor3IsBack’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Segmentor3IsBack/libs/Segmentor3IsBack.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Segmentor3IsBack/libs/Segmentor3IsBack.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘segregation’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘seismicRoll’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sejmRP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RPostgreSQL/libs/RPostgreSQL.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RPostgreSQL/libs/RPostgreSQL.so: failed to map segment from shared object
Execution halted
Running examples in ‘Select-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plotProbs
> ### Title: Plots results from the selectSpecies function
> ### Aliases: plotProbs
> 
> ### ** Examples
> 
> ### 1 trait constraint with maximum functional diversity and entropy
> Spp <- 5 #S = number of species
> trait <- as.matrix(data.frame(trait=c(1:Spp)))
> rownames(trait) <- c(letters[1:nrow(trait)])
> result1 <- selectSpecies(t2c=trait, constraints=c(3.5), t2d=trait, obj="QH", capd=FALSE)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: selectSpecies ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘selectSpecies.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘selectr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SeleMix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: pwr
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SELF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: splines
Loading required package: quadprog
Error: package or namespace load failed for ‘quadprog’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Error: package ‘quadprog’ could not be loaded
Execution halted
Running examples in ‘semantic.dashboard-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: box
> ### Title: Create a box.
> ### Aliases: box
> 
> ### ** Examples
> 
> box(title = "Sample box", color = "blue", width = 11,
+     "This is a box content"
+ )
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Calls: box ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Semblance’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/dotCall64/libs/dotCall64.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/dotCall64/libs/dotCall64.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘semds’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/minpack.lm/libs/minpack.lm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/minpack.lm/libs/minpack.lm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘semiArtificial’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SEMID’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: numDeriv
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘SEMinR.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SemiPar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cluster/libs/cluster.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cluster/libs/cluster.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘semPlot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘semPower.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sem’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘introduction-to-package-SEMrushR-.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘semver’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sendmailR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rtiff
Loading required package: pixmap
Error: package or namespace load failed for ‘rtiff’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtiff/libs/rtiff.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtiff/libs/rtiff.so: failed to map segment from shared object
Error: package ‘rtiff’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sensitivity2x2xk’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BiasedUrn/libs/BiasedUrn.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BiasedUrn/libs/BiasedUrn.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sensitivityPStrat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sensitivity’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sensitivity/libs/sensitivity.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sensitivity/libs/sensitivity.so: failed to map segment from shared object
Execution halted
Running examples in ‘sensmediation-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: coefs.sensmed
> ### Title: ML estimation of regression parameters for calculation of direct
> ###   and indirect effects under unobserved confounding
> ### Aliases: coefs.sensmed
> 
> ### ** Examples
> 
> 
> require(mvtnorm)
Loading required package: mvtnorm
Error: package or namespace load failed for ‘mvtnorm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
> 
> n <- 1000
> set.seed(102677)
> x <- rnorm(n)
> z.star <- -0.5 + 0.1*x + rnorm(n)
> z <- ifelse(z.star > 0, 1, 0)
> 
> #Generating correlated error terms for the mediator and outcome models:
> R <- 0.5
> Sigma <- cbind(c(1,R), c(R,1))
> epsilon <- rmvnorm(n, sigma = Sigma)
Error in rmvnorm(n, sigma = Sigma) : could not find function "rmvnorm"
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SensMixed’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sensR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘senstrat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BiasedUrn/libs/BiasedUrn.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BiasedUrn/libs/BiasedUrn.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SensusR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/openssl/libs/openssl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/openssl/libs/openssl.so: failed to map segment from shared object
Execution halted
Running examples in ‘SentimentAnalysis-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: countWords
> ### Title: Count words
> ### Aliases: countWords countWords.Corpus countWords.character
> ###   countWords.data.frame countWords.TermDocumentMatrix
> ###   countWords.DocumentTermMatrix
> 
> ### ** Examples
> 
> documents <- c("This is a test", "an one more")
> 
> # count words (without stopwords)
> countWords(documents)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: countWords ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘SentimentAnalysis.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sentimentr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: wrapr
Error: package or namespace load failed for ‘seplyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: clue
Error: package or namespace load failed for ‘clue’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cluster/libs/cluster.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cluster/libs/cluster.so: failed to map segment from shared object
Error: package ‘clue’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tcltk
Loading required package: tcltk2
Loading required package: Biostrings
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: ‘BiocGenerics’

The following objects are masked from ‘package:parallel’:

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from ‘package:stats’:

    IQR, mad, sd, var, xtabs

The following objects are masked from ‘package:base’:

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, basename, cbind, colMeans, colSums, colnames,
    dirname, do.call, duplicated, eval, evalq, get, grep, grepl,
    intersect, is.unsorted, lapply, lengths, mapply, match, mget,
    order, paste, pmax, pmax.int, pmin, pmin.int, rank, rbind,
    rowMeans, rowSums, rownames, sapply, setdiff, sort, table, tapply,
    union, unique, unsplit, which, which.max, which.min

Loading required package: S4Vectors
Loading required package: stats4
Error: package or namespace load failed for ‘S4Vectors’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/S4Vectors/libs/S4Vectors.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/S4Vectors/libs/S4Vectors.so: failed to map segment from shared object
Error: package ‘S4Vectors’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SeqGrapheR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/S4Vectors/libs/S4Vectors.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/S4Vectors/libs/S4Vectors.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘seqHMM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Running examples in ‘seqICP-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: seqICPnl
> ### Title: Non-linear Invariant Causal Prediction
> ### Aliases: seqICPnl
> 
> ### ** Examples
> 
> set.seed(2)
> 
> # environment 1
> na <- 120
> X1a <- 0.3*rnorm(na)
> X3a <- X1a + 0.2*rnorm(na)
> Ya <- 2*X1a^2 + 0.6*sin(X3a) + 0.1*rnorm(na)
> X2a <- -0.5*Ya + 0.5*X3a + 0.1*rnorm(na)
> 
> # environment 2
> nb <- 80
> X1b <- 2*rnorm(nb)
> X3b <- rnorm(nb)
> Yb <- 2*X1b^2 + 0.6*sin(X3b) + 0.1*rnorm(nb)
> X2b <- -0.5*Yb + 0.8*rnorm(nb)
> 
> # combine environments
> X1 <- c(X1a,X1b)
> X2 <- c(X2a,X2b)
> X3 <- c(X3a,X3b)
> Y <- c(Ya,Yb)
> Xmatrix <- cbind(X1, X2, X3)
> 
> # use GAM as regression function
> GAM <- function(X,Y){
+   d <- ncol(X)
+   if(d>1){
+     formula <- "Y~1"
+     names <- c("Y")
+     for(i in 1:(d-1)){
+       formula <- paste(formula,"+s(X",toString(i),")",sep="")
+       names <- c(names,paste("X",toString(i),sep=""))
+     }
+     data <- data.frame(cbind(Y,X[,-1,drop=FALSE]))
+       colnames(data) <- names
+     fit <- fitted.values(mgcv::gam(as.formula(formula),data=data))
+   } else{
+     fit <- rep(mean(Y),nrow(X))
+   }
+   return(fit)
+ }
> 
> # Y follows the same structural assignment in both environments
> # a and b (cf. the lines Ya <- ... and Yb <- ...).
> # The direct causes of Y are X1 and X3.
> # A GAM model fit considers X1, X2 and X3 as significant.
> # All these variables are helpful for the prediction of Y.
> summary(mgcv::gam(Y~s(X1)+s(X2)+s(X3)))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: summary ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘seqinr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: foreach
Loading required package: doParallel
Loading required package: iterators
Loading required package: parallel
Error: package or namespace load failed for ‘SeqKat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘seqminer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/seqminer/libs/seqminer.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/seqminer/libs/seqminer.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: copynumber
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: ‘BiocGenerics’

The following objects are masked from ‘package:parallel’:

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from ‘package:stats’:

    IQR, mad, sd, var, xtabs

The following objects are masked from ‘package:base’:

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, basename, cbind, colMeans, colSums, colnames,
    dirname, do.call, duplicated, eval, evalq, get, grep, grepl,
    intersect, is.unsorted, lapply, lengths, mapply, match, mget,
    order, paste, pmax, pmax.int, pmin, pmin.int, rank, rbind,
    rowMeans, rowSums, rownames, sapply, setdiff, sort, table, tapply,
    union, unique, unsplit, which, which.max, which.min

Error: package or namespace load failed for ‘copynumber’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/S4Vectors/libs/S4Vectors.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/S4Vectors/libs/S4Vectors.so: failed to map segment from shared object
Error: package ‘copynumber’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sequoia’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sequoia/libs/sequoia.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sequoia/libs/sequoia.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘seriation’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/TSP/libs/TSP.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/TSP/libs/TSP.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘cover.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘servr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sesem’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: QCA
Error: package or namespace load failed for ‘QCA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Error: package ‘QCA’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SetRank’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sets’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sets/libs/sets.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sets/libs/sets.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘settings.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sfadv’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sfdct’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘sfinx-vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘sfsmisc-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: diagDA
> ### Title: Diagonal Discriminant Analysis
> ### Aliases: diagDA dDA print.dDA predict.dDA
> ### Keywords: naive Bayes classifier models classif
> 
> ### ** Examples
> 
> ## two artificial examples by Andreas Greutert:
> d1 <- data.frame(x = c(1, 5, 5, 5, 10, 25, 25, 25, 25, 29),
+                  y = c(4, 1, 2, 4,  4,  4,     6:8,     7))
> n.plot(d1)
> library(cluster)
Error: package or namespace load failed for ‘cluster’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cluster/libs/cluster.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cluster/libs/cluster.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SFS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SFtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bit/libs/bit.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bit/libs/bit.so: failed to map segment from shared object
Execution halted
Running examples in ‘sgee-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: bisee
> ### Title: Bi-Level Stagewise Estimating Equations Implementation
> ### Aliases: bisee bisee bisee.formula bisee.default bisee.fit gsee
> 
> ### ** Examples
> 
> 
> 
> #####################
> ## Generate test data
> #####################
> 
> ## Initialize covariate values
> p <- 50 
> beta <- c(rep(2,5),
+           c(1, 0, 1.5, 0, .5),
+           rep(0.5,5),
+           rep(0,p-15))
> groupSize <- 5
> numGroups <- length(beta)/groupSize
> 
> 
> generatedData <- genData(numClusters = 50,
+                          clusterSize = 4,
+                          clusterRho = 0.6,
+                          clusterCorstr = "exchangeable",
+                          yVariance = 1,
+                          xVariance = 1,
+                          numGroups = numGroups,
+                          groupSize = groupSize,
+                          groupRho = 0.3,
+                          beta = beta,
+                          family = gaussian(),
+                          intercept = 1)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Calls: genData ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sgeostat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sgeostat/libs/sgeostat.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sgeostat/libs/sgeostat.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sglg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/robustbase/libs/robustbase.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/robustbase/libs/robustbase.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tensorflow
Error: package or namespace load failed for ‘tensorflow’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘tensorflow’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sgmodel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sGMRFmix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: poibin
Error: package or namespace load failed for ‘poibin’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/poibin/libs/poibin.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/poibin/libs/poibin.so: failed to map segment from shared object
Error: package ‘poibin’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SGPdata’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SGP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shadowtext’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shapeR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shapes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/minpack.lm/libs/minpack.lm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/minpack.lm/libs/minpack.lm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: ghyp
Loading required package: numDeriv
Loading required package: gplots
Error: package or namespace load failed for ‘gplots’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Error: package ‘gplots’ could not be loaded
Execution halted
Running examples in ‘SharpeR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: predint
> ### Title: prediction interval for Sharpe ratio
> ### Aliases: predint
> 
> ### ** Examples
> 
> 
> # should reject null
> etc <- predint(rnorm(1000,mean=0.5,sd=0.1),oosdf=127,ope=1)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: predint ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Running ‘testthat.R’ [0s/0s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # Copyright 2013 Steven E. Pav. All Rights Reserved.
  > # Author: Steven E. Pav
  > 
  > # This file is part of SharpeR.
  > #
  > # SharpeR is free software: you can redistribute it and/or modify
  > # it under the terms of the GNU Lesser General Public License as published by
  > # the Free Software Foundation, either version 3 of the License, or
  > # (at your option) any later version.
  > #
  > # SharpeR is distributed in the hope that it will be useful,
  > # but WITHOUT ANY WARRANTY; without even the implied warranty of
  > # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  > # GNU Lesser General Public License for more details.
  > #
  > # You should have received a copy of the GNU Lesser General Public License
  > # along with SharpeR.  If not, see <http://www.gnu.org/licenses/>.
  > 
  > # env var:
  > # nb: 
  > # see also:
  > # todo:
  > # changelog: 
  > #
  > # Created: 2013.03.14
  > # Copyright: Steven E. Pav, 2012-2013
  > # Author: Steven E. Pav
  > # Comments: Steven E. Pav
  > # SVN: $Id: blankheader.txt 25454 2012-02-14 23:35:25Z steven $
  > 
  > # because Hadley says it should be like this.
  > # see https://github.com/hadley/devtools/wiki/Testing
  > 
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘AsymptoticMarkowitz.Rnw’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sharpr2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sharpshootR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: stats4
Loading required package: Formula
Loading required package: dcmle
Loading required package: dclone
Loading required package: coda
Error: package or namespace load failed for ‘coda’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘coda’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SHELF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shiftR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/shiftR/libs/shiftR.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/shiftR/libs/shiftR.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinyAce’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘shinyaframe-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: aDataScene
> ### Title: A-Frame Scene with R data
> ### Aliases: aDataScene
> 
> ### ** Examples
> 
> library(dplyr)
Error: package or namespace load failed for ‘dplyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘scatterplot3d.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘shinyalert.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinyanimate’:
 .onLoad failed in loadNamespace() for ‘shinyanimate’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinybootstrap2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinyBS’:
 .onAttach failed in attachNamespace() for ‘shinyBS’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinycssloaders’:
 .onLoad failed in loadNamespace() for ‘shinycssloaders’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinycustomloader’:
 .onLoad failed in loadNamespace() for ‘shinycustomloader’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinydashboardPlus’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinydashboard’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinyDND’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘css_effects.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinyFeedback’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinyFiles’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: heatmaply
Loading required package: plotly
Loading required package: ggplot2
Error: package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘ggplot2’ could not be loaded
Execution halted
Running examples in ‘shinyhelper-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: helper
> ### Title: Augment a shiny.tag with a question mark helper button
> ### Aliases: helper
> 
> ### ** Examples
> 
> helper(shiny::actionButton("go", "click me!"),
+        icon = "exclamation",
+        colour = "red",
+        type = "markdown",
+        content = "ClickHelp")  # looks for 'helpfiles/ClickHelp.md'
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Calls: helper ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shiny.i18n’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ShinyItemAnalysis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinyjqui’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘shinyjs-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: disabled
> ### Title: Initialize a Shiny input as disabled
> ### Aliases: disabled
> 
> ### ** Examples
> 
> if (interactive()) {
+   library(shiny)
+   shinyApp(
+     ui = fluidPage(
+       useShinyjs(),  # Set up shinyjs
+       actionButton("btn", "Click me"),
+       disabled(
+         textInput("element", NULL, "I was born disabled")
+       )
+     ),
+     server = function(input, output) {
+       observeEvent(input$btn, {
+         enable("element")
+       })
+     }
+   )
+ }
> 
> library(shiny)
Error: package or namespace load failed for ‘shiny’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘shinyjs-example.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: pracma
Loading required package: pspline
Error: package or namespace load failed for ‘pspline’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pspline/libs/pspline.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pspline/libs/pspline.so: failed to map segment from shared object
Error: package ‘pspline’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinyLP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘shinymaterial-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: material_button
> ### Title: Create a shinymaterial button
> ### Aliases: material_button
> 
> ### ** Examples
> 
> material_button(
+   input_id = "example_button",
+   label = "Button",
+   icon = "cloud",
+   depth = 5,
+   color = "blue lighten-2"
+ )
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Calls: material_button ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shiny’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinyRGL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shiny.router’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shiny.semantic’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ShinyTester’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinytest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinythemes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinyTime’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinytoastr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinyTree’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinyWidgets’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shock’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/glasso/libs/glasso.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/glasso/libs/glasso.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ShortForm’:
 .onLoad failed in loadNamespace() for ‘mnormt’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mnormt/libs/mnormt.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mnormt/libs/mnormt.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shotGroups’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘showimage’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/png/libs/png.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/png/libs/png.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘showtextdb’:
 .onLoad failed in loadNamespace() for ‘sysfonts’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sysfonts/libs/sysfonts.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sysfonts/libs/sysfonts.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: sysfonts
Error: package or namespace load failed for ‘sysfonts’:
 .onLoad failed in loadNamespace() for ‘sysfonts’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sysfonts/libs/sysfonts.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sysfonts/libs/sysfonts.so: failed to map segment from shared object
Error: package ‘sysfonts’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shrink’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Depends: includes the non-default packages:
  ‘hdrcde’ ‘coda’ ‘MASS’ ‘bayesm’ ‘mnormt’ ‘spatstat’
Adding so many packages to the search path is excessive and importing
selectively is preferable.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: hdrcde
Error: package or namespace load failed for ‘hdrcde’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/hdrcde/libs/hdrcde.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/hdrcde/libs/hdrcde.so: failed to map segment from shared object
Error: package ‘hdrcde’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SIBERG’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mclust/libs/mclust.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mclust/libs/mclust.so: failed to map segment from shared object
Execution halted
Running examples in ‘SIBER-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: fitEllipse
> ### Title: Fit a multivariate normal distribution to x and y data using
> ###   jags
> ### Aliases: fitEllipse
> 
> ### ** Examples
> 
> x <- stats::rnorm(50)
> y <- stats::rnorm(50)
> parms <- list()
> parms$n.iter <- 2 * 10^3
> parms$n.burnin <- 500
> parms$n.thin <- 2     
> parms$n.chains <- 2    
> priors <- list()
> priors$R <- 1 * diag(2)
> priors$k <- 2
> priors$tau.mu <- 1.0E-3
> fitEllipse(x, y, parms, priors)
Error: .onLoad failed in loadNamespace() for 'rjags', details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rjags/libs/rjags.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rjags/libs/rjags.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘Centroid-Vectors.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Running examples in ‘sicegar-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: categorize
> ### Title: Categorize input data by comparing the AIC values of the three
> ###   fitted models.
> ### Aliases: categorize
> 
> ### ** Examples
> 
> # Example 1 with double sigmoidal data
> time=seq(3, 24, 0.1)
> 
> #simulate intensity data and add noise
> noise_parameter <- 0.2
> intensity_noise <- runif(n = length(time), min = 0, max = 1) * noise_parameter
> intensity <- sicegar::doublesigmoidalFitFormula(time,
+                                                finalAsymptoteIntensityRatio = .3,
+                                                maximum = 4,
+                                                slope1Param = 1,
+                                                midPoint1Param = 7,
+                                                slope2Param = 1,
+                                                midPointDistanceParam = 8)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spatial/libs/spatial.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spatial/libs/spatial.so: failed to map segment from shared object
Calls: <Anonymous> ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘additional_parameters.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SIDES’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/nnet/libs/nnet.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/nnet/libs/nnet.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sidier’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘Introduction_to_sidrar.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SID’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/graph/libs/BioC_graph.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/graph/libs/BioC_graph.so: failed to map segment from shared object
Execution halted
Running examples in ‘SiER-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: cv.SiER
> ### Title: Cross-validation for high-dimensional multivariate regression
> ### Aliases: cv.SiER
> 
> ### ** Examples
> 
> # q=1
> library(MASS)
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SIfEK’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sigmajs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sigmaNet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘sigmoid.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘signalHsmm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘signal’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Running examples in ‘sigora-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: makeGPS
> ### Title: Create your own Signature Object.
> ### Aliases: makeGPS
> ### Keywords: functions
> 
> ### ** Examples
> 
> data(nciTable)
> ## what the input looks like:
> head(nciTable)
          pathwayId                                           pathwayName
1 pi3kplctrkpathway Trk receptor signaling mediated by PI3K and PLC-gamma
2 pi3kplctrkpathway Trk receptor signaling mediated by PI3K and PLC-gamma
3 pi3kplctrkpathway Trk receptor signaling mediated by PI3K and PLC-gamma
4 pi3kplctrkpathway Trk receptor signaling mediated by PI3K and PLC-gamma
5 pi3kplctrkpathway Trk receptor signaling mediated by PI3K and PLC-gamma
6 pi3kplctrkpathway Trk receptor signaling mediated by PI3K and PLC-gamma
             gene
1 ENSG00000140992
2 ENSG00000196689
3 ENSG00000142208
4 ENSG00000145675
5 ENSG00000138741
6 ENSG00000152495
> ## create a SigObject. use the saveFile parameter for reuse.  
> nciH<-makeGPS(pathwayTable=nciTable)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Calls: makeGPS ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sigQC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mclust/libs/mclust.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mclust/libs/mclust.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘lmExample.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SigTree’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: hapsim
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: boot
Loading required package: mvtnorm
Error: package or namespace load failed for ‘mvtnorm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Error: package ‘mvtnorm’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SimComp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Running examples in ‘SimCop-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: SplineFitDepFct
> ### Title: Fit a dependence function by spline smoothing
> ### Aliases: SplineFitDepFct
> ### Keywords: smooth
> 
> ### ** Examples
> 
> ## Data from Hall and Tajvidi (2004, ANZJS)
> EstDF2 <- NonparEstDepFct(MaxTemp, convex = FALSE)
> 
> ## Plot modified Pickands Function and area in which
> ## dependence function must lie
> plot(EstDF2, ylim = c(0.5,1), xlab = "w", ylab = "A(w)", type="l", lty="longdash")
> polygon(c(0, 0.5, 1, 0), c(1, 0.5, 1, 1))
> 
> ## Fit spline to Pickands function and add to plot
> splfit <- SplineFitDepFct(EstDF2)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Calls: SplineFitDepFct ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SimCorMultRes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/evd/libs/evd.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/evd/libs/evd.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: SimMultiCorrData
Error: package or namespace load failed for ‘SimMultiCorrData’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Error: package ‘SimMultiCorrData’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘simctest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/simctest/libs/simctest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/simctest/libs/simctest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SimDesign’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Sim.DiffProc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rstream
Error: package or namespace load failed for ‘rstream’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rstream/libs/rstream.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rstream/libs/rstream.so: failed to map segment from shared object
Error: package ‘rstream’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SimEUCartelLaw’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘simexaft’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘simglm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SimHaz’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: stringi
Error: package or namespace load failed for ‘stringi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Error: package ‘stringi’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘similr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SimInf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘simIReff-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: eff
> ### Title: Effectiveness Distributions
> ### Aliases: eff deff peff qeff reff
> 
> ### ** Examples
> 
> # sample distribution from AP scores
> e <- effCont_beta(web2010ap[,1])
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: effCont_beta ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘simLife’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: simmer
Error: package or namespace load failed for ‘simmer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘simmer’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘simmer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SimMultiCorrData’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘simode’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/deSolve/libs/deSolve.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/deSolve/libs/deSolve.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘simPATHy.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘SimPhe.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘simPH’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘clusterCaches.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘simpleRCache’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: Formula
Loading required package: plotrix
Error: package or namespace load failed for ‘simplexreg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/simplexreg/libs/simplexreg.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/simplexreg/libs/simplexreg.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SimplifyStats’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘simputation’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SimReg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/graph/libs/BioC_graph.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/graph/libs/BioC_graph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SimRVPedigree’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘simsalapar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/colorspace/libs/colorspace.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/colorspace/libs/colorspace.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SimSeq’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/fdrtool/libs/fdrtool.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/fdrtool/libs/fdrtool.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘simstandard’:
 .onLoad failed in loadNamespace() for ‘mnormt’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mnormt/libs/mnormt.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mnormt/libs/mnormt.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: abind
Loading required package: svUnit
Error: package or namespace load failed for ‘simSummary’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘simsurv_technical.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Running examples in ‘simtimer-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: as.datetime
> ### Title: Back-transformation from a sim_datetime to a datetime
> ### Aliases: as.datetime
> 
> ### ** Examples
> 
> origin_date <- lubridate::ymd_hms("2016-01-01 00:00:00")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: :: ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘simtimer.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SimTimeVar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘simTool’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rcdk
Loading required package: rcdklibs
Loading required package: rJava
Error: package or namespace load failed for ‘rJava’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Error: package ‘rJava’ could not be loaded
Execution halted
Running examples in ‘simukde-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: find_best_fit
> ### Title: Find Best Fitting Distribution
> ### Aliases: find_best_fit
> 
> ### ** Examples
> 
> petal.length <- datasets::iris$Petal.Length[datasets::iris$Species == "setosa"]
> simukde::find_best_fit(x = petal.length, positive = TRUE)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: <Anonymous> ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Running ‘testthat.R’ [0s/0s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # Got this Sys.setenv line from https://github.com/luckyrandom/cmaker/blob/b85813ac2b7aef69932eca8fbb4fa0ec225e0af0/tests/testthat.R
  > # so that devtools:check() won't hang.
  > # setting R_TESTS to empty string because of
  > # https://github.com/hadley/testthat/issues/144
  > # revert this when that issue in R is fixed.
  > Sys.setenv("R_TESTS" = "")
  > 
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: pracma
Loading required package: arrangements
Error: package or namespace load failed for ‘arrangements’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gmp/libs/gmp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gmp/libs/gmp.so: failed to map segment from shared object
Error: package ‘arrangements’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sinew’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SingleCaseES’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SinIW’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/fdrtool/libs/fdrtool.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/fdrtool/libs/fdrtool.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sirad’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘SIRE-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: causal.decompose
> ### Title: Estimation and decomposition of simultaneous equation model
> ### Aliases: causal.decompose
> 
> ### ** Examples
> 
> data("macroIT")
> eq.system = list(
+                eq1 = C ~  CP  + I + CP_1,
+                eq2 = I ~ K + CP_1,
+                eq3 = WP ~ I + GDP + GDP_1,
+                eq4 = GDP ~ C + I + GDP_1,
+                eq5 = CP ~ WP + T,
+                eq6 = K ~ I + K_1)
> 
> instruments = ~ T + CP_1 + GDP_1 + K_1
> 
> causal.decompose(data = macroIT,
+                eq.system = eq.system,
+                resid.est = "noDfCor",
+                instruments = instruments,
+                p.adj = TRUE,
+                alpha = 0.05)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Calls: causal.decompose ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SIRItoGTFS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘siRSM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sirt’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sisal’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: foreach
Loading required package: doParallel
Loading required package: iterators
Loading required package: parallel
Error: package or namespace load failed for ‘SISIR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SIS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sisus’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sitmo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: sitree
Loading required package: data.table
Error: package or namespace load failed for ‘data.table’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Error: package ‘data.table’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sivipm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SixSigma’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SizeEstimation’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sizeMat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Running examples in ‘SiZer-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: Arkansas
> ### Title: Time Series of Macroinvertabrates Abundance in the Arkansas
> ###   River.
> ### Aliases: Arkansas
> ### Keywords: datasets
> 
> ### ** Examples
> 
> require(ggplot2)
Loading required package: ggplot2
Error: package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
> 
> data(Arkansas)
> ggplot(Arkansas, aes(x=year, y=sqrt.mayflies)) + 
+    geom_point()
Error in ggplot(Arkansas, aes(x = year, y = sqrt.mayflies)) : 
  could not find function "ggplot"
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sjlabelled’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sjmisc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sjPlot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sjstats’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SKAT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SKAT/libs/SKAT.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SKAT/libs/SKAT.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: parallel
Error: package or namespace load failed for ‘skda’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/skda/libs/skda.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/skda/libs/skda.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘skellam.rnw’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SkewHyperbolic’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/DistributionUtils/libs/DistributionUtils.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/DistributionUtils/libs/DistributionUtils.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Skillings.Mack’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘skimr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sklarsomega’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘skmeans’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cluster/libs/cluster.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cluster/libs/cluster.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SK’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/leaps/libs/leaps.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/leaps/libs/leaps.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘skynet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: astrolibR
Error: package or namespace load failed for ‘skyscapeR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: httr
Loading required package: htmlTable
Error: package or namespace load failed for ‘htmlTable’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/checkmate/libs/checkmate.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/checkmate/libs/checkmate.so: failed to map segment from shared object
Error: package ‘htmlTable’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘slackr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘slam’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘chapter01-HortonMosaic.Rnw’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘slfm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SLHD’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SLHD/libs/SLHD.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SLHD/libs/SLHD.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SLICER’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘slickR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘user_doc.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘slimrec’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sloop’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SLOPE’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘slouch-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: artiodactyla
> ### Title: Artiodactyla Phylogeny
> ### Aliases: artiodactyla
> ### Keywords: datasets
> 
> ### ** Examples
> 
> data(artiodactyla)
> library(ape)
Error: package or namespace load failed for ‘ape’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘slowraker-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: rbind_rakelist
> ### Title: rbind a rakelist
> ### Aliases: rbind_rakelist
> 
> ### ** Examples
> 
> rakelist <- slowrake(txt = dog_pubs$abstract[1:2])

  |                                                                            
  |                                                                      |   0%Error: .onLoad failed in loadNamespace() for 'rJava', details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘faqs.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘slp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘smaa’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/smaa/libs/smaa.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/smaa/libs/smaa.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: plotrix
Error: package or namespace load failed for ‘smacof’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘smacpod’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘smac’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/smac/libs/smac.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/smac/libs/smac.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: SSBtools
Loading required package: Matrix
Error: package or namespace load failed for ‘Matrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘Matrix’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘smam’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘smapr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rappdirs/libs/rappdirs.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rappdirs/libs/rappdirs.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SmartEDA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘smart’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: R6
Loading required package: rjags
Loading required package: coda
Error: package or namespace load failed for ‘coda’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘coda’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SmartSifter’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Running examples in ‘smcfcs-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: smcfcs
> ### Title: Substantive model compatible fully conditional specification
> ###   imputation of covariates.
> ### Aliases: smcfcs
> 
> ### ** Examples
> 
> #set random number seed to make results reproducible
> set.seed(123)
> 
> #linear substantive model with quadratic covariate effect
> imps <- smcfcs(ex_linquad, smtype="lm", smformula="y~z+x+xsq",
+                method=c("","","norm","x^2",""))
[1] "Outcome variable(s): y"
[1] "Passive variables: xsq"
[1] "Partially obs. variables: x"
[1] "Fully obs. substantive model variables: z"
[1] "Imputation  1"
[1] "Imputing:  x  using  z  plus outcome"
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: smcfcs ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘smcfcs-vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SMCP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SMCP/libs/SMCP.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SMCP/libs/SMCP.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SMC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SMC/libs/SMC.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SMC/libs/SMC.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘smcUtils’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/smcUtils/libs/smcUtils.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/smcUtils/libs/smcUtils.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: splines
Loading required package: lattice
Error: package or namespace load failed for ‘lattice’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘lattice’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘smerc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/maps/libs/maps.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/maps/libs/maps.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘readme.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: abind
Loading required package: parallel
Error: package or namespace load failed for ‘smfsb’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/smfsb/libs/smfsb.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/smfsb/libs/smfsb.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘smicd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Smisc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Smisc/libs/Smisc.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Smisc/libs/Smisc.so: failed to map segment from shared object
Execution halted
Running ‘testall.R’ [0s/0s]
Running the tests in ‘tests/testall.R’ failed.
Complete output:
  > library( "testthat" )
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SMMA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SMNCensReg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: SSN
Loading required package: RSQLite
Error: package or namespace load failed for ‘RSQLite’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘RSQLite’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘smoothAPC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SparseM/libs/SparseM.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SparseM/libs/SparseM.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: greybox
Error: package or namespace load failed for ‘greybox’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘greybox’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘smoothROCtime’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/KernSmooth/libs/KernSmooth.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/KernSmooth/libs/KernSmooth.so: failed to map segment from shared object
Execution halted
Running examples in ‘smoothr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: densify
> ### Title: Densify spatial lines or polygons
> ### Aliases: densify
> 
> ### ** Examples
> 
> library(sf)
Error: package or namespace load failed for ‘sf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘smoothr.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘SmoothWin-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: SmoothWin
> ### Title: Implementation of the soft windowing on the linear models
> ### Aliases: SmoothWin
> ### Keywords: "Windowing", "SmoothWin"
> 
> ### ** Examples
> 
> # All examples use the Orthodont dataset in the nlme package
> library(nlme)
Error: package or namespace load failed for ‘nlme’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘smovie-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: FPearson
> ### Title: Fisher's transformation of the Pearson product moment
> ###   correlation coefficient
> ### Aliases: FPearson dFPearson pFPearson qFPearson rFPearson
> 
> ### ** Examples
> 
> dFPearson(-1:1, N = 10)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SuppDists/libs/SuppDists.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SuppDists/libs/SuppDists.so: failed to map segment from shared object
Calls: dFPearson ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘smovie-vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘smpic-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: smpic_save
> ### Title: Save a social media sized ggplot
> ### Aliases: smpic_save
> 
> ### ** Examples
> 
> library(dplyr)
Error: package or namespace load failed for ‘dplyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘make_a_social_media_plot.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘SMPracticals-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: blalock
> ### Title: Blalock-Taussig Shunt Data
> ### Aliases: blalock
> ### Keywords: datasets
> 
> ### ** Examples
> 
> data(blalock)
> library(survival)
Error: package or namespace load failed for ‘survival’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Matrix/libs/Matrix.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Matrix/libs/Matrix.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sm/libs/sm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sm/libs/sm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘smurf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SMUT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘snakecase-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: caseconverter
> ### Title: Specific case converter shortcuts
> ### Aliases: caseconverter to_snake_case to_lower_camel_case
> ###   to_upper_camel_case to_screaming_snake_case to_parsed_case
> ###   to_mixed_case to_lower_upper_case to_upper_lower_case to_swap_case
> ###   to_sentence_case
> ### Keywords: utilities
> 
> ### ** Examples
> 
> strings <- c("this Is a Strange_string", "AND THIS ANOTHER_One", NA)
> 
> to_snake_case(strings)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: to_snake_case ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘caseconverters.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SnakeCharmR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘snappier’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/snappier/libs/snappier.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/snappier/libs/snappier.so: failed to map segment from shared object
Execution halted
Running examples in ‘snfa-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: allocative.efficiency
> ### Title: Allocative efficiency estimation
> ### Aliases: allocative.efficiency
> 
> ### ** Examples
> 
> data(USMacro)
> 
> USMacro <- USMacro[complete.cases(USMacro),]
> 
> #Extract data
> X <- as.matrix(USMacro[,c("K", "L")])
> y <- USMacro$Y
> 
> X.price <- as.matrix(USMacro[,c("K.price", "L.price")])
> y.price <- rep(1e9, nrow(USMacro)) #Price of $1 billion of output is $1 billion
> 
> #Run model
> efficiency.model <- allocative.efficiency(X, y,
+                                          X.price, y.price,
+                                          X.constrained = X,
+                                          model = "br",
+                                          method = "mc")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: allocative.efficiency ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘snht’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘snnR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/snnR/libs/snnR.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/snnR/libs/snnR.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SnowballC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SnowballC/libs/SnowballC.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SnowballC/libs/SnowballC.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘snowboot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘snowflakes.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: haplo.stats
Error: package or namespace load failed for ‘haplo.stats’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘haplo.stats’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘snpEnrichment’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SNPknock’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘sNPLS-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: sNPLS
> ### Title: Fit a sNPLS model
> ### Aliases: sNPLS
> 
> ### ** Examples
> 
> X_npls<-array(rpois(7500, 10), dim=c(50, 50, 3))
> 
> Y_npls<-matrix(2+0.4*X_npls[,5,1]+0.7*X_npls[,10,1]-0.9*X_npls[,15,1]+
+ 0.6*X_npls[,20,1]- 0.5*X_npls[,25,1]+rnorm(50), ncol=1)
> 
> fit<-sNPLS(X_npls, Y_npls, ncomp=3, keepJ = rep(2,3) , keepK = rep(1,3))
Component number  1 
Number of iterations:  1 
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: sNPLS ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: grid
Error: package or namespace load failed for ‘snp.plotter’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘snpRF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/snpRF/libs/snpRF.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/snpRF/libs/snpRF.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: snpStats
Loading required package: survival
Error: package or namespace load failed for ‘survival’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘survival’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: stats4
Error: package or namespace load failed for ‘sn’:
 .onLoad failed in loadNamespace() for ‘mnormt’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mnormt/libs/mnormt.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mnormt/libs/mnormt.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SNscan’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sns’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SobolSequence’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘socialmixr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SocialNetworks’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘social’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SoDA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SoDA/libs/SoDA.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SoDA/libs/SoDA.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: magic
Loading required package: abind
Loading required package: ppls
Loading required package: splines
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sodium’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sodium/libs/sodium.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sodium/libs/sodium.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sofa’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SOFIA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/png/libs/png.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/png/libs/png.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘exporting-xml.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘soilcarbon’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: aqp
Error: package or namespace load failed for ‘aqp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘aqp’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rpanel
Loading required package: tcltk
Package `rpanel', version 1.1-4: type help(rpanel) for summary information
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SOIL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘soil.spec’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/KernSmooth/libs/KernSmooth.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/KernSmooth/libs/KernSmooth.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘soiltexture’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘solarius’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘solartime’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘solitude’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘solrium’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘SolveRationalMatrixEquation.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘soma’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/ore/libs/ore.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/ore/libs/ore.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘som.nn’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘som’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/som/libs/som.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/som/libs/som.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘soobench’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/soobench/libs/soobench.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/soobench/libs/soobench.so: failed to map segment from shared object
Execution halted
Running examples in ‘sophisthse-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: get_stat_hse_info_vector
> ### Title: Obtain additional information for specific time series
> ### Aliases: get_stat_hse_info_vector
> 
> ### ** Examples
> 
> info <- sophisthse:::get_stat_hse_info_vector('IP_EA_Q', 1, 'methodology')
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Calls: <Anonymous> ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘sophisthse_intro.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sortinghat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sorvi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Running examples in ‘sos-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: findFn
> ### Title: Search Help Pages
> ### Aliases: findFn ? ???
> ### Keywords: misc
> 
> ### ** Examples
> 
> # Skip these tests on CRAN,
> # because they take more than 5 seconds
> if(!fda::CRAN()){
+ 
+ z <- findFn("spline", maxPages = 2)
+ # alternative
+ zq <- ???spline(2)
+ 
+ ## Don't show: 
+ stopifnot(
+ ## End(Don't show)
+ all.equal(z, zq)
+ ## Don't show: 
+ )
+ ## End(Don't show)
+ 
+ # To search for 2 terms, not necessarily together:
+ RSS <- findFn('RSiteSearch function', 1)
+ matches(RSS)
+ 
+ # To search for an exact string, use braces:
+ RSS. <- findFn('{RSiteSearch function}', 1)
+ matches(RSS.) # list(nrow = 0, matches = 0)
+ 
+ # example in which resulting page has some unicode characters
+ Lambert <- findFn("Lambert")
+ Lambert
+ ##
+ ## Too many matches
+ ##
+ fa <- findFn('factor analysis')
+ # Finds too many matches to process;
+ # reports Inf matches but returns none.
+ # When this happens, use a more restrictive search
+ 
+ # check
+ fa0 <- RSS.[seq(1, length=0),]
+ attr(fa0, 'matches') <- Inf
+ attr(fa0, 'PackageSummary') <- PackageSummary(fa0)
+ attr(fa0, 'string') <- 'factor+analysis'
+ attr(fa0, 'call') <- call('findFn', string = "factor analysis")
+ 
+ ## Don't show: 
+ stopifnot(
+ ## End(Don't show)
+ all.equal(fa, fa0)
+ ## Don't show: 
+ )
+ ## End(Don't show)
+ }
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: :: ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...

Error: processing vignette ‘sos.Rnw’ failed with diagnostics:
 chunk 3 (label = PL.RSiteSearch) 
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sotkanet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘soundecology’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SoundexBR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SoundexBR/libs/SoundexBR.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SoundexBR/libs/SoundexBR.so: failed to map segment from shared object
Execution halted
Running examples in ‘soundgen-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: addFormants
> ### Title: Add formants
> ### Aliases: addFormants
> 
> ### ** Examples
> 
> sound = c(rep(0, 1000), runif(16000), rep(0, 1000))  # white noise
> # NB: pad with silence to avoid artefacts if removing formants
> # playme(sound)
> # spectrogram(sound, samplingRate = 16000)
> 
> # add F1 = 900, F2 = 1300 Hz
> sound_filtered = addFormants(sound, formants = c(900, 1300))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: addFormants ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘acoustic_analysis.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘SourceSet-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: easyLookSource
> ### Title: Easy look results
> ### Aliases: easyLookSource
> 
> ### ** Examples
> 
> ## Load the SourceSetObj obtained from the source set analysis of ALL dataset
> 
> # see vignette for more details
> print(load(file=system.file("extdata","ALLsourceresult.RData",package = "SourceSet")))
[1] "results.all"
> class(results.all)
[1] "sourceSetList"
> n.primary<-length(lapply(results.all,function(x) x$primarySet))
> 
> # show only genes that appear in at least one of the source sets of the investigated pathways
> easyLookSource(sourceObj=results.all, maxnum.variable = n.primary,
+                label.variable = "Genes",label.graph = "Pathways")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: easyLookSource ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘SourceSet.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sourcetools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sourcetools/libs/sourcetools.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sourcetools/libs/sourcetools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SoyNAM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpaCCr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tcltk
Loading required package: coda
Error: package or namespace load failed for ‘coda’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘coda’ could not be loaded
Execution halted
Running examples in ‘spaceNet-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: multiNet
> ### Title: Latent Space Models for Multivariate Networks
> ### Aliases: multiNet print.multiNet
> 
> ### ** Examples
> 
> data(vickers)
> alphaR <- alphaRef(vickers, D = 2)  # compute alpha reference value
> 
> it <- 10     # small number of iterations just for example
> 
> # 2-dimensional latent space model, no covariates
> mod <- multiNet(vickers, niter = it, D = 2,
+                 alphaRef = alphaR)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/statnet.common/libs/statnet.common.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/statnet.common/libs/statnet.common.so: failed to map segment from shared object
Calls: multiNet ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘space’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/space/libs/space.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/space/libs/space.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘isotherms.rnw’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spacetime’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spacom’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spacyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: mapproj
Loading required package: maps
Error: package or namespace load failed for ‘maps’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/maps/libs/maps.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/maps/libs/maps.so: failed to map segment from shared object
Error: package ‘maps’ could not be loaded
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘v1_workflow.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpaDES.addins’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: quickPlot
Error: package or namespace load failed for ‘quickPlot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Error: package ‘quickPlot’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpaDES’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpaDES.tools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘spaero-introduction.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spam64’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spam64/libs/spam64.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spam64/libs/spam64.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spaMM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: dotCall64
Error: package or namespace load failed for ‘dotCall64’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/dotCall64/libs/dotCall64.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/dotCall64/libs/dotCall64.so: failed to map segment from shared object
Error: package ‘dotCall64’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: magrittr
Loading required package: xml2
Error: package or namespace load failed for ‘xml2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘xml2’ could not be loaded
Execution halted
Running examples in ‘spant-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: fit_mrs
> ### Title: Perform a fit based analysis of MRS data.
> ### Aliases: fit_mrs
> 
> ### ** Examples
> 
> fname <- system.file("extdata","philips_spar_sdat_WS.SDAT",package="spant")
> svs <- read_mrs(fname, format="spar_sdat")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: read_mrs ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘spant-intro.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparcl’:
 .onLoad failed in loadNamespace() for ‘sparcl’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sparcl/libs/sparcl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sparcl/libs/sparcl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sparc/libs/sparc.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sparc/libs/sparc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spareserver’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pingr/libs/pingr.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pingr/libs/pingr.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparkavro’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparkbq’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparkline’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparklyr.nested’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparklyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spark.sas7bdat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: Cairo
Error: package or namespace load failed for ‘Cairo’:
 .onLoad failed in loadNamespace() for ‘Cairo’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Cairo/libs/Cairo.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Cairo/libs/Cairo.so: failed to map segment from shared object
Error: package ‘Cairo’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparkwarc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: sparsebnUtils
Loading required package: ccdrAlgorithm
Error: package or namespace load failed for ‘ccdrAlgorithm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘ccdrAlgorithm’ could not be loaded
Execution halted
Running examples in ‘sparsebnUtils-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: fit_multinom_dag
> ### Title: Inference in discrete Bayesian networks
> ### Aliases: fit_multinom_dag
> 
> ### ** Examples
> 
> 
> ### construct a random data set
> x <- c(0,1,0,1,0)
> y <- c(1,0,1,0,1)
> z <- c(0,1,2,1,0)
> a <- c(1,1,1,0,0)
> b <- c(0,0,1,1,1)
> dat <- data.frame(x, y, z, a, b)
> 
> ### randomly construct an edgelist of a graph
> nnode <- ncol(dat)
> li <- vector("list", length = nnode)
> li[[1]] <- c(2L,4L)
> li[[2]] <- c(3L,4L,5L)
> li[[3]] <- integer(0)
> li[[4]] <- integer(0)
> li[[5]] <- integer(0)
> edgeL <- edgeList(li)
> 
> ### run fit_multinom_dag
> fit.multinom <- fit_multinom_dag(edgeL, dat)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/nnet/libs/nnet.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/nnet/libs/nnet.so: failed to map segment from shared object
Calls: fit_multinom_dag ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘SparseDC.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘sparseEigen-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: spEigen
> ### Title: Sparse Spectral Decomposition of a Matrix
> ### Aliases: spEigen
> 
> ### ** Examples
> 
> library(sparseEigen)
> n <- 100  # samples
> m <- 500  # dimension
> q <- 3  # number of sparse eigenvectors to be estimated
> sp_card <- 0.1*m  # sparsity of each eigenvector
> 
> # generate covariance matrix with sparse eigenvectors
> V <- matrix(0, m, q)
> V[cbind(seq(1, q*sp_card), rep(1:q, each = sp_card))] <- 1/sqrt(sp_card)
> V <- cbind(V, matrix(rnorm(m*(m-q)), m, m-q))
> V <- qr.Q(qr(V))  # orthogonalize eigenvectors
> lmd <- c(100*seq(from = q, to = 1), rep(1, m-q))  # generate eigenvalues
> R <- V %*% diag(lmd) %*% t(V)  # covariance matrix
> 
> # generate data
> X <- MASS::mvrnorm(n, rep(0, m), R)  # random data with underlying sparse structure
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: :: ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘SparseEigenvectors.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparseHessianFD’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘sparseIndexTracking-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: spIndexTrack
> ### Title: Sparse Index Tracking
> ### Aliases: spIndexTrack
> 
> ### ** Examples
> 
> library(sparseIndexTracking)
> library(xts)
Loading required package: zoo
Error: package or namespace load failed for ‘zoo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘zoo’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparseinv’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparseLDA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/class/libs/class.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/class/libs/class.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SparseLPM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: robustHD
Loading required package: ggplot2
Error: package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘ggplot2’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: doRNG
Loading required package: foreach
Loading required package: rngtools
Loading required package: pkgmaker
Loading required package: registry
Error: package or namespace load failed for ‘pkgmaker’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Error: package ‘pkgmaker’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SparseM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SparseM/libs/SparseM.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SparseM/libs/SparseM.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparseMVN’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparsepca’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparseSEM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sparseSEM/libs/sparseSEM.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sparseSEM/libs/sparseSEM.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparsesvd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparseSVM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sparseSVM/libs/sparseSVM.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sparseSVM/libs/sparseSVM.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SparseTSCGM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/glasso/libs/glasso.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/glasso/libs/glasso.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘using.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparsio’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spass’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spatgraphs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘SpatialAcc-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: GR.Hospitals
> ### Title: Greek Hospitals
> ### Aliases: GR.Hospitals
> ### Keywords: datasets Greek Public Hospitals
> 
> ### ** Examples
> 
> data(GR.Hospitals)
> hist(GR.Hospitals$Beds15)
Loading required package: sp
Error: package or namespace load failed for ‘sp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error in .requirePackage(package) : unable to find required package ‘sp’
Calls: hist ... getClass -> getClassDef -> .classEnv -> .requirePackage
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpatialBall’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spatialEco’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpatialExtremes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/maps/libs/maps.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/maps/libs/maps.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: abind
Loading required package: fields
Loading required package: spam
Loading required package: dotCall64
Error: package or namespace load failed for ‘dotCall64’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/dotCall64/libs/dotCall64.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/dotCall64/libs/dotCall64.so: failed to map segment from shared object
Error: package ‘dotCall64’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: SpatialExtremes
Error: package or namespace load failed for ‘SpatialExtremes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/maps/libs/maps.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/maps/libs/maps.so: failed to map segment from shared object
Error: package ‘SpatialExtremes’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpatialGraph’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spatialkernel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spatialkernel/libs/spatialkernel.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spatialkernel/libs/spatialkernel.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: SocialNetworks
Error: package or namespace load failed for ‘SocialNetworks’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘SocialNetworks’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpatialNP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SpatialNP/libs/SpatialNP.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SpatialNP/libs/SpatialNP.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpatialPack’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SpatialPack/libs/SpatialPack.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SpatialPack/libs/SpatialPack.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spatial’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spatial/libs/spatial.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spatial/libs/spatial.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spatialrisk’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: cubature
Error: package or namespace load failed for ‘cubature’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘cubature’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spatial.tools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mmap/libs/mmap.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mmap/libs/mmap.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpatialTools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpatialVS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spatialwarnings’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpaTimeClus’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpatMCA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/dotCall64/libs/dotCall64.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/dotCall64/libs/dotCall64.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpatPCA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spatsoc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpATS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/dotCall64/libs/dotCall64.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/dotCall64/libs/dotCall64.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spatstat.data’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: spatstat.data
Error: package or namespace load failed for ‘spatstat.data’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so: failed to map segment from shared object
Error: package ‘spatstat.data’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spatstat.utils’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spatsurv’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spbabel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spBayesSurv’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Spbsampling’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘CUSUM_LinearRegression.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: parallel
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spCP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spc/libs/spc.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spc/libs/spc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spcr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spcr/libs/spcr.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spcr/libs/spcr.so: failed to map segment from shared object
Execution halted
Running examples in ‘spData-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: afcon
> ### Title: Spatial patterns of conflict in Africa 1966-78
> ### Aliases: afcon africa.rook.nb afxy paper.nb
> ### Keywords: datasets spdep
> 
> ### ** Examples
> 
> data(afcon)
> if (!requireNamespace("spdep", quietly = TRUE)) {
+   library(spdep)
+   plot(africa.rook.nb, afxy)
+   plot(diffnb(paper.nb, africa.rook.nb), afxy, col="red", add=TRUE)
+   text(afxy, labels=attr(africa.rook.nb, "region.id"), pos=4, offset=0.4)
+   moran.test(afcon$totcon, nb2listw(africa.rook.nb))
+   moran.test(afcon$totcon, nb2listw(paper.nb))
+   geary.test(afcon$totcon, nb2listw(paper.nb))
+ }
Loading required package: sp
Error: package or namespace load failed for ‘sp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sp/libs/sp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sp/libs/sp.so: failed to map segment from shared object
Error: package ‘sp’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/KernSmooth/libs/KernSmooth.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/KernSmooth/libs/KernSmooth.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spduration’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘speaq’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spearmanCI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpecHelpers’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SPECIES’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SPECIES/libs/SPECIES.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SPECIES/libs/SPECIES.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘specklestar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘specmine’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpecsVerification’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spectacles’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spectralAnalysis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpectralMap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/dotCall64/libs/dotCall64.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/dotCall64/libs/dotCall64.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spectral.methods’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rasterImage
Loading required package: plotrix
Error: package or namespace load failed for ‘spectral’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spectrolab’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spef’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: lmomco
Error: package or namespace load failed for ‘lmomco’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/goftest/libs/goftest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/goftest/libs/goftest.so: failed to map segment from shared object
Error: package ‘lmomco’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spellcheckr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Running examples in ‘spelling-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: spell_check_files
> ### Title: Spell Check
> ### Aliases: spell_check_files spell_check_text
> 
> ### ** Examples
> 
> # Example files
> files <- list.files(system.file("examples", package = "knitr"),
+   pattern = "\\.(Rnw|Rmd|html)$", full.names = TRUE)
> spell_check_files(files)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: spell_check_files ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spemd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MBA/libs/MBA.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MBA/libs/MBA.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spe’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spe/libs/spe.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spe/libs/spe.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sperrorest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘spew-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot_pop_totals
> ### Title: Plot characteristic summary output from
> ###   summarize_top_spew_region as totals
> ### Aliases: plot_pop_totals
> 
> ### ** Examples
> 
> data(tartanville)
> 
> tartanville_syneco <- spew(tartanville$pop_table, tartanville$shapefile, 
+                            tartanville$pums_h, tartanville$pums_p)
Loading required package: sp
Error: package or namespace load failed for ‘sp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sp/libs/sp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sp/libs/sp.so: failed to map segment from shared object
Error in .requirePackage(package) : unable to find required package ‘sp’
Calls: spew ... getClass -> getClassDef -> .classEnv -> .requirePackage
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘spew-quickstart.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spex’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/png/libs/png.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/png/libs/png.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: moments
Loading required package: tmvtnorm
Loading required package: mvtnorm
Error: package or namespace load failed for ‘mvtnorm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Error: package ‘mvtnorm’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spGARCH’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spgs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spgs/libs/spgs.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spgs/libs/spgs.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sphet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spiderbar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spider’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spiders’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spikeSlabGAM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: emdbook
Error: package or namespace load failed for ‘emdbook’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘emdbook’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spind’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘splashr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘splines2-intro.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: compiler
Loading required package: corpcor
Loading required package: matrixStats
Error: package or namespace load failed for ‘matrixStats’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/matrixStats/libs/matrixStats.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/matrixStats/libs/matrixStats.so: failed to map segment from shared object
Error: package ‘matrixStats’ could not be loaded
Execution halted
Running examples in ‘splitfngr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: lbfgs_share
> ### Title: Use lbfgs packages's lbfgs function but pass in a single
> ###   function that returns both the function and gradient together in a
> ###   list. Useful when the function and gradient are expensive to
> ###   calculate and can be calculated faster together than separate.
> ### Aliases: lbfgs_share
> 
> ### ** Examples
> 
> quad_share <- function(x){list(sum(x^4), 4*x^3)}
> lbfgs_share(vars=c(3, -5), fngr=quad_share)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: lbfgs_share ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘splithalf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SplitSoftening’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SplitSoftening/libs/SplitSoftening.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SplitSoftening/libs/SplitSoftening.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘splitstackshape’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: spdep
Loading required package: sp
Error: package or namespace load failed for ‘sp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘sp’ could not be loaded
Execution halted
Running examples in ‘spls-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: cv.splsda
> ### Title: Compute and plot cross-validated error for SPLSDA classification
> ### Aliases: cv.splsda
> ### Keywords: models multivariate
> 
> ### ** Examples
> 
> data(prostate)
> set.seed(1)
> # misclassification rate plot. eta is searched between 0.1 and 0.9 and
> # number of hidden components is searched between 1 and 5
> ## Not run: 
> ##D  cv <- cv.splsda( prostate$x, prostate$y, K = c(1:5), eta = seq(0.1,0.9,0.1),
> ##D          scale.x=FALSE, fold=5 )
> ## End(Not run)
> ## Don't show: 
>  cv <- list(); cv$eta.opt <- 0.8; cv$K.opt <- 3; 
> ## End(Don't show)
> (splsda( prostate$x, prostate$y, eta=cv$eta.opt, K=cv$K.opt, scale.x=FALSE ))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: splsda ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘splus2R’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/splus2R/libs/splus2R.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/splus2R/libs/splus2R.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘splusTimeDate’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/splusTimeDate/libs/splusTimeDate.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/splusTimeDate/libs/splusTimeDate.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: splusTimeDate
Error: package or namespace load failed for ‘splusTimeDate’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/splusTimeDate/libs/splusTimeDate.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/splusTimeDate/libs/splusTimeDate.so: failed to map segment from shared object
Error: package ‘splusTimeDate’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spm12r’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/git2r/libs/git2r.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/git2r/libs/git2r.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spMC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spMC/libs/spMC.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spMC/libs/spMC.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spmoran’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/dotCall64/libs/dotCall64.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/dotCall64/libs/dotCall64.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘spm.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpNetPrep’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘SpNMF-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: chty
> ### Title: chty
> ### Aliases: chty
> 
> ### ** Examples
> 
> 
> ##we use the simulated data spdata here
> ##the spdata is simulated from feature matrix combined by 2
> #3types features from one group and 3 types from the other.
> ##choose number of types using our function
> ##2-folds cross validation is used here
> ##the upper bound of number of types for both classes is 2
> ##remove all zero variables from the data
> spdata.rm=spdata[c(1:4,41:44),colSums(spdata)!=0]
> y=c(rep(1,4),rep(0,4))
> types=chty(spdata.rm,y,2,2)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cluster/libs/cluster.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cluster/libs/cluster.so: failed to map segment from shared object
Calls: chty ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Running examples in ‘spnn-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: pnn.guess
> ### Title: pnn.guess
> ### Aliases: pnn.guess
> 
> ### ** Examples
> 
> library(spnn)
> data(norms)
> 
> pnn <- pnn.learn(norms)
> pnn.guess(nn = pnn, X = c(1,2))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: pnn.guess ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spocc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spongecake’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
prepare_Rd: H.Binv.Rd:48-50: Dropping empty section \note
prepare_Rd: V.theta.Rd:28-30: Dropping empty section \details
prepare_Rd: V.theta.Rd:43-45: Dropping empty section \note
prepare_Rd: V.theta.Rd:49-51: Dropping empty section \seealso
prepare_Rd: V.theta.Rd:52-53: Dropping empty section \examples
prepare_Rd: confid.int.theta.Rd:62-64: Dropping empty section \note
prepare_Rd: dd.est.Rd:39-41: Dropping empty section \note
prepare_Rd: dd.est.Rd:45-47: Dropping empty section \seealso
prepare_Rd: ell.theta.Rd:60-62: Dropping empty section \note
prepare_Rd: ell.theta.Rd:69-70: Dropping empty section \examples
prepare_Rd: grad.hessinv.Rd:47-49: Dropping empty section \note
prepare_Rd: ks.sporm.Rd:43-45: Dropping empty section \note
prepare_Rd: ks.stat.Rd:39-41: Dropping empty section \note
prepare_Rd: mrle.sporm.Rd:66-68: Dropping empty section \note
prepare_Rd: mrle.sporm.Rd:72-74: Dropping empty section \seealso
prepare_Rd: newton.theta.Rd:47-49: Dropping empty section \note
prepare_Rd: phi.Rd:32-38: Dropping empty section \value
prepare_Rd: phi.Rd:48-50: Dropping empty section \note
prepare_Rd: plotor.Rd:26-32: Dropping empty section \value
prepare_Rd: plotor.Rd:42-44: Dropping empty section \note
prepare_Rd: plotor.Rd:48-50: Dropping empty section \seealso
prepare_Rd: sporm-package.Rd:53-54: Dropping empty section \seealso
prepare_Rd: sporm-package.Rd:55-56: Dropping empty section \examples
prepare_Rd: test.theta.Rd:54-56: Dropping empty section \note
prepare_Rd: elltheta.rd:53-55: Dropping empty section \note
prepare_Rd: elltheta.rd:62-63: Dropping empty section \examples
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sport’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: shinyBS
Error: package or namespace load failed for ‘shinyBS’:
 .onAttach failed in attachNamespace() for ‘shinyBS’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Error: package ‘shinyBS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spotifyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SPOT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/DEoptim/libs/DEoptim.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/DEoptim/libs/DEoptim.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sppmix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spray’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SPreFuGED’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Biobase/libs/Biobase.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Biobase/libs/Biobase.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sprex’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/maps/libs/maps.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/maps/libs/maps.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: CoxBoost
Loading required package: survival
Error: package or namespace load failed for ‘survival’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘survival’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spsann’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SPSL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SPSL/libs/SPSL.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SPSL/libs/SPSL.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: spTimer
Error: package or namespace load failed for ‘spTimer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘spTimer’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sptemExp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spTest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spTimer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spt’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spt/libs/spt.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/spt/libs/spt.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spup’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SPUTNIK’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/class/libs/class.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/class/libs/class.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SQDA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/PDSCE/libs/PDSCE.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/PDSCE/libs/PDSCE.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: gsubfn
Loading required package: proto
Loading required package: RSQLite
Error: package or namespace load failed for ‘RSQLite’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘RSQLite’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sqliter’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SqlRender’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Running examples in ‘sqlscore-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: create_statement
> ### Title: Generate a CREATE TABLE statement from a model
> ### Aliases: create_statement
> 
> ### ** Examples
> 
> # Basic create statements
> mod <- glm(Sepal.Length ~ Sepal.Width + Petal.Length + Petal.Width + Species,
+            data=datasets::iris)
> create_statement(mod, src_table="tbl_name", dest_table="target_tbl")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: create_statement ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SQRL’:
 .onLoad failed in loadNamespace() for ‘SQRL’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RODBC/libs/RODBC.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RODBC/libs/RODBC.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘squid’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sROC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sROC/libs/sROC.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sROC/libs/sROC.so: failed to map segment from shared object
Execution halted
Running examples in ‘srp-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ncs
> ### Title: The natural cubic spline interpolation of a matrix
> ### Aliases: ncs
> 
> ### ** Examples
> 
> x <- matrix(rnorm(100), ncol=10)
> ncs(x)$cf0
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: ncs ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tcltk
Loading required package: tcltk2
Loading required package: gtools
Error: package or namespace load failed for ‘gtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Error: package ‘gtools’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘srvyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ss3sim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ssa’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/ssa/libs/ssa.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/ssa/libs/ssa.so: failed to map segment from shared object
Execution halted
Running examples in ‘ssc-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: coBC
> ### Title: CoBC method
> ### Aliases: coBC
> 
> ### ** Examples
> 
> 
> library(ssc)
> 
> ## Load Wine data set
> data(wine)
> 
> cls <- which(colnames(wine) == "Wine")
> x <- wine[, -cls] # instances without classes
> y <- wine[, cls] # the classes
> x <- scale(x) # scale the attributes
> 
> ## Prepare data
> set.seed(20)
> # Use 50% of instances for training
> tra.idx <- sample(x = length(y), size = ceiling(length(y) * 0.5))
> xtrain <- x[tra.idx,] # training instances
> ytrain <- y[tra.idx]  # classes of training instances
> # Use 70% of train instances as unlabeled set
> tra.na.idx <- sample(x = length(tra.idx), size = ceiling(length(tra.idx) * 0.7))
> ytrain[tra.na.idx] <- NA # remove class information of unlabeled instances
> 
> # Use the other 50% of instances for inductive testing
> tst.idx <- setdiff(1:length(y), tra.idx)
> xitest <- x[tst.idx,] # testing instances
> yitest <- y[tst.idx] # classes of testing instances
> 
> ## Example: Training from a set of instances with 1-NN as base classifier.
> set.seed(1)
> m1 <- coBC(x = xtrain, y = ytrain, 
+            learner = caret::knn3, 
+            learner.pars = list(k = 1),
+            pred = "predict")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: coBC ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SSDM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SDMTools/libs/SDMTools.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SDMTools/libs/SDMTools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ssdtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: BDgraph
Error: package or namespace load failed for ‘BDgraph’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Error: package ‘BDgraph’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ssh’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/ssh/libs/ssh.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/ssh/libs/ssh.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ssizeRNA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Biobase/libs/Biobase.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Biobase/libs/Biobase.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SSLASSO’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SSLASSO/libs/SSLASSO.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SSLASSO/libs/SSLASSO.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SSL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/class/libs/class.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/class/libs/class.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ssmn’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/evd/libs/evd.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/evd/libs/evd.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘SSM.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: sampleSelection
Loading required package: maxLik
Loading required package: miscTools
Error: package or namespace load failed for ‘maxLik’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘maxLik’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ssmsn’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  dbfopenSSN.c:1119:6: warning: ‘strncpy’ output may be truncated copying between 0 and 399 bytes from a string of length 399 [-Wstringop-truncation]
  dbfopenSSN.c:1100:6: warning: ‘strncpy’ output may be truncated copying between 0 and 399 bytes from a string of length 399 [-Wstringop-truncation]
  dbfopenSSN.c:663:2: warning: ‘strncpy’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation]
  dbfopenSSN.c:1511:2: warning: ‘strncpy’ output may be truncated copying 11 bytes from a string of length 11 [-Wstringop-truncation]
See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/SSN.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sspline’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sspline/libs/sspline.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sspline/libs/sspline.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: parallel
Error: package or namespace load failed for ‘sspse’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘SSRA-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: summary.seqtable
> ### Title: Sequential Relationship Table Summary
> ### Aliases: summary.seqtable
> 
> ### ** Examples
> 
> # Example data based on Takeya (1991)
> 
> # Sakai Sequential Relation Analysis
> # ordering assesed according to the correlation coefficient and mean difference
> exdat.ssra <- SSRA(exdat, output = FALSE)
> exdat.seqtab<- seqtable(exdat.ssra, output = FALSE)
> summary(exdat.seqtab)

 Sequential path: 4 variables (n = 1)
	 Item1 -> Item2 -> Item3 -> Item5 

 Sequential path: 3 variables (n = 3)
	 Item1 -> Item2 -> Item4 
	 Item1 -> Item2 -> Item5 
	 Item1 -> Item3 -> Item5 

 Sequential path: 2 variables (n = 2)
	 Item1 -> Item4 
	 Item1 -> Item5 

 Equal path: 2 variables (n = 2)
	 Item3 = Item4 
	 Item4 = Item5 

Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: summary ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Running examples in ‘ssrm.logmer-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ssrm.logmer
> ### Title: Sample Size Determination for Longitudinal Designs with Binary
> ###   Outcome
> ### Aliases: ssrm.logmer
> 
> ### ** Examples
> 
> ssrm.logmer(nt=4,Xd=c(0,1,2,3),betap=c(1,0,0.1,0.3),var.ri=0.5,
+             ratio=0.5,xi1=c(0,0,0,1),xi2=c(0.1,0.1,0.2,0.6))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/statmod/libs/statmod.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/statmod/libs/statmod.so: failed to map segment from shared object
Calls: ssrm.logmer ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SSRMST’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sssc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/class/libs/class.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/class/libs/class.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sss’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Sstack’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/randomForest/libs/randomForest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/randomForest/libs/randomForest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sstModel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: GIGrvg
Error: package or namespace load failed for ‘GIGrvg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/GIGrvg/libs/GIGrvg.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/GIGrvg/libs/GIGrvg.so: failed to map segment from shared object
Error: package ‘GIGrvg’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stability’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stablelearner’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stablespec’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/graph/libs/BioC_graph.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/graph/libs/BioC_graph.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Using_stabs.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Stack’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bit/libs/bit.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bit/libs/bit.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: stacomirtools
Loading required package: RODBC
Error: package or namespace load failed for ‘RODBC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RODBC/libs/RODBC.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RODBC/libs/RODBC.so: failed to map segment from shared object
Error: package ‘RODBC’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stagePop’:
 .onLoad failed in loadNamespace() for ‘PBSddesolve’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/PBSddesolve/libs/PBSddesolve.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/PBSddesolve/libs/PBSddesolve.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: pegas
Loading required package: ape
Error: package or namespace load failed for ‘ape’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘ape’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stampr’:
 .onLoad failed in loadNamespace() for ‘deldir’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/deldir/libs/deldir.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/deldir/libs/deldir.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘standardize’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘stanmath.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stapler’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘staplr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘starma’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘starmie’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: abind
Loading required package: sf
Error: package or namespace load failed for ‘sf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘sf’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘STARTdesign’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘startR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘STARTS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘startup-intro.md’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/commonmark/libs/commonmark.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/commonmark/libs/commonmark.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘statar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RGtk2/libs/RGtk2.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RGtk2/libs/RGtk2.so: failed to map segment from shared object
Error: package or namespace load failed for ‘StatCharrms’:
 .onLoad failed in loadNamespace() for ‘RGtk2’, details:
  call: install_all()
  error: This platform is not yet supported by the automatic installer. Please install GTK+ manually, if necessary. See: http://www.gtk.org
In addition: Warning message:
Failed to load RGtk2 dynamic library, attempting to install it. 
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘statcheck’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘statebins’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘states’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘statGraph’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stationery’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/foreign/libs/foreign.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/foreign/libs/foreign.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘statip’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘StatMeasures’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘statmod’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/statmod/libs/statmod.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/statmod/libs/statmod.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘statnet.common’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tergm
Loading required package: ergm
Loading required package: network
Error: package or namespace load failed for ‘network’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/network/libs/network.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/network/libs/network.so: failed to map segment from shared object
Error: package ‘network’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘staTools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/VGAM/libs/VGAM.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/VGAM/libs/VGAM.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘statquotes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘StatRank’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘statsDK-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: fix_time
> ### Title: Fixes the time column of a data set
> ### Aliases: fix_time
> 
> ### ** Examples
> 
> df <- statsDK::retrieve_data("FOLK1A", TID = "*", ALDER = "IALT",
+                              CIVILSTAND = "TOT", lang = "da")
Error in is.url(url) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Calls: <Anonymous> ... suppressMessages -> withCallingHandlers -> retrieve_metadata
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Get_started_with_statsDK.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: BayesFactor
Loading required package: coda
Error: package or namespace load failed for ‘coda’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘coda’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘STB’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stdReg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stdvectors’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘steemr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: follower_df
> ### Title: A id list of an id's followers from steemdb.com
> ### Aliases: follower_df
> 
> ### ** Examples
> 
> follower_df()
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Calls: follower_df ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘steepness’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/steepness/libs/steepness.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/steepness/libs/steepness.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stemmatology’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cluster/libs/cluster.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cluster/libs/cluster.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘STEPCAM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Running examples in ‘stepPenal-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: StepPenalL2
> ### Title: Stepwise forward variable selection using penalized regression.
> ### Aliases: StepPenalL2
> 
> ### ** Examples
> 
> # use the StepPenal function on a simulated dataset, with given lamda and w.
> 
> set.seed(14)
> beta    <- c(3, 2, -1.6, -1)
> noise   <- 5
> simData <- SimData(N=100, beta=beta, noise=noise, corr=TRUE)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Calls: SimData ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stepPlr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stepPlr/libs/stepPlr.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stepPlr/libs/stepPlr.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘StepReg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stepR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘StepSignalMargiLike’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stepwise’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stepwise/libs/stepwise.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stepwise/libs/stepwise.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘StepwiseTest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘StereoMorph’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stevedore’:
 .onLoad failed in loadNamespace() for ‘stevedore’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stilt’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/dotCall64/libs/dotCall64.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/dotCall64/libs/dotCall64.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘STI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stlplus’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘STMedianPolish’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: stm
Error: package or namespace load failed for ‘stm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘stm’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stminsights’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘StMoSim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘STMotif’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stocc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stochprofML’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stockR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rbenchmark
Loading required package: quantmod
Loading required package: xts
Loading required package: zoo
Error: package or namespace load failed for ‘zoo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘zoo’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: permute
Loading required package: rjson
Error: package or namespace load failed for ‘rjson’:
 .onLoad failed in loadNamespace() for ‘rjson’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rjson/libs/rjson.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rjson/libs/rjson.so: failed to map segment from shared object
Error: package ‘rjson’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stormwindmodel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Running examples in ‘storr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: storr
> ### Title: Object cache
> ### Aliases: storr
> 
> ### ** Examples
> 
> st <- storr(driver_environment())
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Calls: storr ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘external.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stoRy’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tcltk
Error: package or namespace load failed for ‘stosim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stplanr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rpanel
Loading required package: tcltk
Package `rpanel', version 1.1-4: type help(rpanel) for summary information
Loading required package: splancs
Loading required package: sp
Error: package or namespace load failed for ‘sp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘sp’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘StrainRanking’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/StrainRanking/libs/StrainRanking.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/StrainRanking/libs/StrainRanking.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘strandCet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: apex
Loading required package: ape
Error: package or namespace load failed for ‘ape’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘ape’ could not be loaded
Execution halted
Running examples in ‘strategicplayers-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: strategicplayers-package
> ### Title: Strategic Players
> ### Aliases: strategicplayers-package strategicplayers
> ### Keywords: package
> 
> ### ** Examples
> 
> 
> require(sna)
Loading required package: sna
Loading required package: statnet.common
Error: package or namespace load failed for ‘statnet.common’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Failed with error:  ‘package ‘statnet.common’ could not be loaded’
> 
> network<-rgraph(20, tprob=.2)         #generate a bernoulli random network on 20 nodes
Error in rgraph(20, tprob = 0.2) : could not find function "rgraph"
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Strategy’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stratEst’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stratification’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stratification/libs/stratification.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stratification/libs/stratification.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘StratifiedRF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘strat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: sda
Loading required package: entropy
Loading required package: corpcor
Loading required package: fdrtool
Error: package or namespace load failed for ‘fdrtool’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/fdrtool/libs/fdrtool.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/fdrtool/libs/fdrtool.so: failed to map segment from shared object
Error: package ‘fdrtool’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘streambugs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/deSolve/libs/deSolve.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/deSolve/libs/deSolve.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: stream
Loading required package: proxy
Error: package or namespace load failed for ‘proxy’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/proxy/libs/proxy.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/proxy/libs/proxy.so: failed to map segment from shared object
Error: package ‘proxy’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stressr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘strider’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stringb’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/backports/libs/backports.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/backports/libs/backports.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stringdist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringdist/libs/stringdist.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringdist/libs/stringdist.so: failed to map segment from shared object
Execution halted
Running examples in ‘stringformattr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: format-string
> ### Title: Pass variables into strings
> ### Aliases: format-string %f%
> 
> ### ** Examples
> 
> # order matters when not using a named vector
> 'the quick {} fox jumped {} the lazy {}' %f% c('brown', 'over', 'dog')
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: %f% ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Found the following significant warnings:
  icu61/common/cstring.h:43:70: warning: ‘char* strncpy(char*, const char*, size_t)’ specified bound 100 equals destination size [-Wstringop-truncation]
  icu61/common/cstring.h:43:70: warning: ‘char* strncpy(char*, const char*, size_t)’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation]
  icu61/common/cstring.h:43:70: warning: ‘char* strncpy(char*, const char*, size_t)’ specified bound 258 equals destination size [-Wstringop-truncation]
See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/stringi.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stringi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stringr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘strip’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘striprtf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘StroupGLMM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘structSSI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: pedigree
Loading required package: Matrix
Error: package or namespace load failed for ‘Matrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘Matrix’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RGtk2/libs/RGtk2.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RGtk2/libs/RGtk2.so: failed to map segment from shared object
Error: package or namespace load failed for ‘strvalidator’:
 .onLoad failed in loadNamespace() for ‘RGtk2’, details:
  call: install_all()
  error: This platform is not yet supported by the automatic installer. Please install GTK+ manually, if necessary. See: http://www.gtk.org
In addition: Warning message:
Failed to load RGtk2 dynamic library, attempting to install it. 
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stsm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/KFKSDS/libs/KFKSDS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/KFKSDS/libs/KFKSDS.so: failed to map segment from shared object
Execution halted
Running examples in ‘stuart-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: bruteforce
> ### Title: Subtest construction using a brute-force approach
> ### Aliases: bruteforce
> 
> ### ** Examples
> 
> 
> # Bruteforce selection in a minimal example
> # selecting 3 of 5 items
> # requires lavaan
> data(fairplayer)
> fs <- list(ra = names(fairplayer)[53:57])
> sel <- bruteforce(fairplayer, fs, 3,
+   cores = 1)  # number of cores set to 1
Loading required namespace: lavaan
Failed with error:  ‘.onLoad failed in loadNamespace() for 'mnormt', details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mnormt/libs/mnormt.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mnormt/libs/mnormt.so: failed to map segment from shared object’
Error: lavaan is not installed. You could try using OpenMx or Mplus instead.
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stubthat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: mAr
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘StVAR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘styler’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stylest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stylo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: AIM
Loading required package: survival
Error: package or namespace load failed for ‘survival’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘survival’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SubgrPlots’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/colorspace/libs/colorspace.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/colorspace/libs/colorspace.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘submax’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘subplex’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/subplex/libs/subplex.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/subplex/libs/subplex.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘subprocess’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/subprocess/libs/subprocess.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/subprocess/libs/subprocess.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘subrank’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/subrank/libs/subrank.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/subrank/libs/subrank.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: CTT
Loading required package: irtoys
Loading required package: sm
Error: package or namespace load failed for ‘sm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sm/libs/sm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sm/libs/sm.so: failed to map segment from shared object
Error: package ‘sm’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘subselect’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘subspace’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SubTite’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sumFREGAT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘summarytools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SUMMER’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sunburstR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘suncalc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Sunclarco’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sundialr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘supcluster’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘supclust’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/class/libs/class.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/class/libs/class.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘supc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: grid
Error: package or namespace load failed for ‘SuperExactTest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SuperExactTest/libs/SuperExactTest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SuperExactTest/libs/SuperExactTest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SuperGauss’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘superheat-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: superheat
> ### Title: Generate supervised heatmaps.
> ### Aliases: superheat
> 
> ### ** Examples
> 
> # plot a heatmap of the numerical iris variables
> # cluster by species and plot Sepal.Length on the right
> # save the superheat object to access the membership vectors
> sh <- superheat(X = iris[,-c(1, 5)],
+                 yr = iris[,1],
+                 yr.axis.name = "Sepal.Length",
+                 membership.rows = iris$Species)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: superheat ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SuperRanker’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: prim
Error: package or namespace load failed for ‘prim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Error: package ‘prim’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SuppDists’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SuppDists/libs/SuppDists.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SuppDists/libs/SuppDists.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘support’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sure’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SurfaceTortoise’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘suropt’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SurrogateTest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘surv2sampleComp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘survAWKMT2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SurvCorr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SurvDisc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘survELtest’:
 .onLoad failed in loadNamespace() for ‘Iso’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Iso/libs/Iso.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Iso/libs/Iso.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘surveydata’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: grid
Loading required package: Matrix
Error: package or namespace load failed for ‘Matrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘Matrix’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SurvGSD’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘survidm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘survivalAnalysis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Running examples in ‘survivALL-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: allHR
> ### Title: For all possible separation points for a cohort ordered by a
> ###   continuous measurement, calculate hazard ratio
> ### Aliases: allHR
> 
> ### ** Examples
> 
> library(survivALL)
> data(nki_subset)
> library(Biobase)
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: ‘BiocGenerics’

The following objects are masked from ‘package:parallel’:

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from ‘package:stats’:

    IQR, mad, sd, var, xtabs

The following objects are masked from ‘package:base’:

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, basename, cbind, colMeans, colSums, colnames,
    dirname, do.call, duplicated, eval, evalq, get, grep, grepl,
    intersect, is.unsorted, lapply, lengths, mapply, match, mget,
    order, paste, pmax, pmax.int, pmin, pmin.int, rank, rbind,
    rowMeans, rowSums, rownames, sapply, setdiff, sort, table, tapply,
    union, unique, unsplit, which, which.max, which.min

Error: package or namespace load failed for ‘Biobase’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Biobase/libs/Biobase.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Biobase/libs/Biobase.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘basic-usage.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘survival’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘survivalROC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/survivalROC/libs/survivalROC.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/survivalROC/libs/survivalROC.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘survPresmooth’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/survPresmooth/libs/survPresmooth.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/survPresmooth/libs/survPresmooth.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘survRM2adapt’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: eha
Loading required package: survival
Error: package or namespace load failed for ‘survival’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘survival’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘survsup’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/colorspace/libs/colorspace.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/colorspace/libs/colorspace.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘survtmle’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘survutils-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: get_cox_res
> ### Title: Run Cox Regression on a Single or Multiple Groups of Data
> ### Aliases: get_cox_res
> 
> ### ** Examples
> 
> library("survival")
Error: package or namespace load failed for ‘survival’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sutteForecastR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/fracdiff/libs/fracdiff.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/fracdiff/libs/fracdiff.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sValues’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘Standard_dialog_boxes_for_everybody.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘svd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/svd/libs/svd.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/svd/libs/svd.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘svglite’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘svgPanZoom-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: svgPanZoom
> ### Title: Pan and Zoom R graphics
> ### Aliases: svgPanZoom
> 
> ### ** Examples
> 
> #  svgPanZoom tries to be very flexible with its first argument
> 
> #  in this first example use SVG as a character string
> #    this is probably the least likely use case
> library(svgPanZoom)
> svgPanZoom('
+    <svg style="height:300px;width:300px;">
+      <circle cx="60" cy="60" r="50" style="fill:none;stroke:blue;"/>
+    </svg>
+ ')
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Calls: svgPanZoom ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘svGUI.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘svgViewR’:
 .onLoad failed in loadNamespace() for ‘rjson’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rjson/libs/rjson.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rjson/libs/rjson.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘svIDE’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘temporary_environment.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SVMMaj’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SVMMatch’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘svmpath’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/svmpath/libs/svmpath.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/svmpath/libs/svmpath.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘svrpath’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘svs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SvyNom’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SwarmSVM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/LiblineaR/libs/LiblineaR.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/LiblineaR/libs/LiblineaR.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘swatches’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: EcoHydRology
Loading required package: operators

Attaching package: ‘operators’

The following objects are masked from ‘package:base’:

    options, strrep

Loading required package: topmodel
Error: package or namespace load failed for ‘topmodel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/topmodel/libs/topmodel.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/topmodel/libs/topmodel.so: failed to map segment from shared object
Error: package ‘topmodel’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sweep’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Running examples in ‘sweidnumbr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: as.pin
> ### Title: Parse personal identity numbers to ABS format
> ### Aliases: as.pin is.pin
> 
> ### ** Examples
> 
> # Examples taken from SKV 704 (see references)
> ex_pin1 <- c("196408233234", "640823-3234", "19640823-3234")
> as.pin(pin = ex_pin1)
[1] "196408233234" "196408233234" "196408233234"
Personal identity number(s)> ex_pin2 <- c("6408233234")
> as.pin(ex_pin2)
Assumption: Pin of format YYMMDDNNNC is assumed to be less than 100 years old
[1] "196408233234"
Personal identity number(s)> ex_pin3 <- c(6408233234, 196408233234)
> as.pin(ex_pin3)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: as.pin ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘swgee’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gee/libs/gee.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gee/libs/gee.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘swirlify’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘swirl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: switchr
Warning: namespace ‘RCurl’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘RCurl’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘RCurl’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘RCurl’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘RCurl’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘RCurl’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Error: package or namespace load failed for ‘switchrGist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning: namespace ‘RCurl’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘RCurl’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘RCurl’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘RCurl’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘RCurl’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘RCurl’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Switched to the 'vign1' computing environment. 
29 packages are currently available.
Packages installed in your site library are suppressed.
To switch back to your previous environment type switchBack()
Reverted to the 'original' computing environment. 
33 packages are currently available.
To switch back to your previous environment type switchBack()
Reverted to the 'original' computing environment. 
33 packages are currently available.
To switch back to your previous environment type switchBack()
Loading required namespace: RJSONIO
Failed with error:  ‘unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RJSONIO/libs/RJSONIO.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RJSONIO/libs/RJSONIO.so: failed to map segment from shared object’

Error: processing vignette ‘switchrvign.Rnw’ failed with diagnostics:
 chunk 13 
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RJSONIO/libs/RJSONIO.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RJSONIO/libs/RJSONIO.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘swmmr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: SWMPr
Loading required package: ggplot2
Error: package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘ggplot2’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sylcount’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sylcount/libs/sylcount.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sylcount/libs/sylcount.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘syllabifyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Packages suggested but not available for checking: ‘sylly.de’ ‘sylly.es’
Running ‘testthat.R’ [0s/0s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # the tests are realized using the "testthat" package
  > # and can be found in ./tests
  > 
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘sylly_vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: clusterSim
Loading required package: cluster
Error: package or namespace load failed for ‘cluster’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cluster/libs/cluster.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cluster/libs/cluster.so: failed to map segment from shared object
Error: package ‘cluster’ could not be loaded
Execution halted
Running examples in ‘symDMatrix-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: blockSize
> ### Title: Return the Block Size of a symDMatrix Object.
> ### Aliases: blockSize
> 
> ### ** Examples
> 
> # Load example symDMatrix (G)
> load.symDMatrix(system.file("extdata", "G.RData", package = "symDMatrix"), readonly = TRUE)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bit/libs/bit.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bit/libs/bit.so: failed to map segment from shared object
Calls: load.symDMatrix ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SympluR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SymTS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SymTS/libs/SymTS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SymTS/libs/SymTS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘synbreed’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/truncnorm/libs/truncnorm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/truncnorm/libs/truncnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘synchronicity’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SyncRNG’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SyncRNG/libs/SyncRNG.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/SyncRNG/libs/SyncRNG.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SYNCSA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Running examples in ‘synoptReg-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: pca_decision
> ### Title: PCA decision
> ### Aliases: pca_decision
> 
> ### ** Examples
> 
> # Load data (mslp)
> data(mslp)
> # Converting our data into a S-mode, but without modifying time period
> smode_mslp <- tidy_cuttime_nc(mslp, only_convert = TRUE)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: tidy_cuttime_nc ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: parallel
Loading required package: parmigene
Error: package or namespace load failed for ‘parmigene’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/parmigene/libs/parmigene.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/parmigene/libs/parmigene.so: failed to map segment from shared object
Error: package ‘parmigene’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Synth’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/kernlab/libs/kernlab.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/kernlab/libs/kernlab.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sysfonts’:
 .onLoad failed in loadNamespace() for ‘sysfonts’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sysfonts/libs/sysfonts.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sysfonts/libs/sysfonts.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sysid’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sys’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sys/libs/sys.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sys/libs/sys.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘systemicrisk’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘syt’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘syuzhet-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: get_dct_transform
> ### Title: Discrete Cosine Transformation with Reverse Transform.
> ### Aliases: get_dct_transform
> 
> ### ** Examples
> 
> s_v <- get_sentences("I begin this story with a neutral statement.
+ Now I add a statement about how much I despise cats.  
+ I am allergic to them. I hate them. Basically this is a very silly test. But I do love dogs!")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Calls: get_sentences ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Running ‘testthat.R’ [0s/0s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > Sys.unsetenv("R_TESTS") # Becasue https://github.com/hadley/testthat/issues/144
  > 
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘syuzhet-vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘taber’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: openxlsx
Error: package or namespace load failed for ‘openxlsx’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘openxlsx’ could not be loaded
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘table1-examples.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘table1xls’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Running examples in ‘tableHTML-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: add_css_caption
> ### Title: Add css to tableHTML's caption
> ### Aliases: add_css_caption
> 
> ### ** Examples
> 
> tableHTML(mtcars, caption = 'This is a caption') %>% 
+   add_css_caption(css = list(c('color', 'font-size'), c('blue', '50px'))) 
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Calls: %>% ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘conditional_column.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tableMatrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tableone’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘tableschema.r-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: Field
> ### Title: Field class
> ### Aliases: Field
> ### Keywords: data
> 
> ### ** Examples
> 
> DESCRIPTOR = list(name = "height", type = "number")
> 
> field <- Field$new(descriptor = DESCRIPTOR)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/yaml/libs/yaml.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/yaml/libs/yaml.so: failed to map segment from shared object
Calls: <Anonymous> ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Running ‘testthat.R’ [0s/0s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > Sys.setenv(R_TESTS = "")
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tabplot
Loading required package: bit
Error: package or namespace load failed for ‘bit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bit/libs/bit.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bit/libs/bit.so: failed to map segment from shared object
Error: package ‘bit’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tab’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘tabr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: append_phrases
> ### Title: Append and duplicate
> ### Aliases: append_phrases glue dup
> 
> ### ** Examples
> 
> glue(8, "16-", "8^")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: glue ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘tabr-basics.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tabularaster’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tabula’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tabulizerjars’:
 .onLoad failed in loadNamespace() for ‘tabulizerjars’, details:
  call: NULL
  error: .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tabulizer’:
 .onLoad failed in loadNamespace() for ‘tabulizerjars’, details:
  call: NULL
  error: .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tadaatoolbox’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tailDepFun’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘tailr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: can_loop_transform_body
> ### Title: Tests if a function, provided by its name, can be transformed.
> ### Aliases: can_loop_transform_body can_loop_transform_ can_loop_transform
> 
> ### ** Examples
> 
> factorial <- function(n)
+     if (n <= 1) 1 else n * factorial(n - 1)
> factorial_acc <- function(n, acc = 1)
+     if (n <= 1) acc else factorial_acc(n - 1, n * acc)
> 
> can_loop_transform(factorial)     # FALSE -- and prints a warning
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: can_loop_transform ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘taipan’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘takos’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: CDM
Loading required package: mvtnorm
Error: package or namespace load failed for ‘mvtnorm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Error: package ‘mvtnorm’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘TanB’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/fdrtool/libs/fdrtool.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/fdrtool/libs/fdrtool.so: failed to map segment from shared object
Execution halted
Running examples in ‘TANDEM-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: coef.tandem
> ### Title: Returns the regression coefficients from a TANDEM fit
> ### Aliases: coef.tandem
> 
> ### ** Examples
> 
> # unpack example data
> x = example_data$x
> y = example_data$y
> upstream = example_data$upstream
> 
> # fit a tandem model, determine the coefficients and create a prediction
> fit = tandem(x, y, upstream, alpha=0.5)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: tandem ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: R6
Loading required package: magrittr
Error: package or namespace load failed for ‘tangram’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘TAQMNGR’:
 .onLoad failed in loadNamespace() for ‘TAQMNGR’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/TAQMNGR/libs/TAQMNGR.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/TAQMNGR/libs/TAQMNGR.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘taRifx’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tatoo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tau’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/tau/libs/tau.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/tau/libs/tau.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘TauStar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tauturri’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tawny’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tawny.types’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘taxa’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘taxizedb’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RMySQL/libs/RMySQL.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RMySQL/libs/RMySQL.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘taxize’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘taxlist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/foreign/libs/foreign.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/foreign/libs/foreign.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘taxonomizr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘taxotools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: parallel
Loading required package: signal
Error: package or namespace load failed for ‘signal’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘signal’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tbl2xts’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tbltools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tbrf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘TBSSurvival’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mcmc/libs/mcmc.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mcmc/libs/mcmc.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘TCGA2STAT.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tcgsaseq’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tclust’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/tclust/libs/tclust.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/tclust/libs/tclust.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Tcomp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘TDA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘TDAstats’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: SPOT
Error: package or namespace load failed for ‘SPOT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/DEoptim/libs/DEoptim.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/DEoptim/libs/DEoptim.so: failed to map segment from shared object
Error: package ‘SPOT’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘TDPanalysis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘tdsc-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: chesmore2011
> ### Title: Coding Matrix from Chesmore (2011)
> ### Aliases: chesmore2011
> ### Keywords: CodingMatrix TDSC
> 
> ### ** Examples
> 
> library(tuneR)
Error: package or namespace load failed for ‘tuneR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tdthap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/tdthap/libs/tdthap.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/tdthap/libs/tdthap.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: LearnBayes
Loading required package: ggplot2
Error: package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘ggplot2’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: eva
Error: package or namespace load failed for ‘eva’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘eva’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘TED’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘teigen’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/teigen/libs/teigen.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/teigen/libs/teigen.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Tejapi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘telefit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘telegram.bot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘telegram’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tcltk2
Loading required package: tcltk
Error: package or namespace load failed for ‘TELP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘templates’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Temporal’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tensorA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/tensorA/libs/tensorA.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/tensorA/libs/tensorA.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tensorflow’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tensorr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘equivariant_estimation.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘TE’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Using-Ternary.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tesseract’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘GIAValidationExample.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘tester_introduction.Rnw’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: parallel
Loading required package: minerva
Error: package or namespace load failed for ‘minerva’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘minerva’ could not be loaded
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘AnIntroductiontoTestFunctions.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘TestingSimilarity’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘testthat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘testthis.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tetraclasse’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘TeXCheckR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘TexExamRandomizer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘texPreview’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sparsepp/include/sparsepp/spp_utils.h:422:44: warning: ‘void* realloc(void*, size_t)’ moving an object of non-trivially copyable type ‘struct std::pair<const std::pair<unsigned int, unsigned int>, int>’; use ‘new’ and ‘delete’ instead [-Wclass-memaccess]
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sparsepp/include/sparsepp/spp_utils.h:422:44: warning: ‘void* realloc(void*, size_t)’ moving an object of non-trivially copyable type ‘struct std::pair<const std::pair<unsigned int, unsigned int>, float>’; use ‘new’ and ‘delete’ instead [-Wclass-memaccess]
See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/text2vec.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘text2vec’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘textcat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/tau/libs/tau.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/tau/libs/tau.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘textclean’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘textfeatures’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: distrom
Loading required package: Matrix
Error: package or namespace load failed for ‘Matrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘Matrix’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: stylo
Error: package or namespace load failed for ‘stylo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘stylo’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘textrank’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘textreadr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘textreg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘textreuse’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘textshape’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: koRpus.lang.en
Loading required package: koRpus
Loading required package: sylly
Error: package or namespace load failed for ‘koRpus’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Error: package ‘koRpus’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tfdatasets’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tfestimators’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘TFisher’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘TFMPvalue’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tfruns’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘TFX’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tgcd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/tgcd/libs/tgcd.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/tgcd/libs/tgcd.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tgp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cluster/libs/cluster.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/cluster/libs/cluster.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘TGS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ThankYouStars’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Running examples in ‘Thermimage-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: diffFrame
> ### Title: A frame difference function for subtracting adjacent frames from
> ###   an imported thermal image sequence.
> ### Aliases: diffFrame
> 
> ### ** Examples
> 
> 
> # set w to 640 and h to 480
> w<-640
> h<-480
> f<-system.file("extdata", "SampleSEQ.seq", package = "Thermimage")
> x<-frameLocates(f)
> suppressWarnings(templookup<-raw2temp(1:65535))
> alldata<-unlist(lapply(x$f.start, getFrames, vidfile=f, w=w, h=h))
> alldata<-matrix(alldata, nrow=w*h, byrow=FALSE)
> alltemperature<-templookup[alldata]
> alltemperature<-unname(matrix(alltemperature, nrow=w*h, byrow=FALSE))
> 
> dalltemperature<-as.matrix(diffFrame(alltemperature, absolute=TRUE), nrow=w)
> 
> # Plot 
> plotTherm(dalltemperature[,1], templookup=NULL, w=w, h=h,  minrangeset=min(dalltemperature),
+           maxrangeset=max(dalltemperature), trans="mirror.matrix")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/dotCall64/libs/dotCall64.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/dotCall64/libs/dotCall64.so: failed to map segment from shared object
Calls: plotTherm ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘theseus’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘thgenetics’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/thgenetics/libs/thgenetics.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/thgenetics/libs/thgenetics.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Thinknum’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘thinkr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘thor’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/thor/libs/thor.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/thor/libs/thor.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ThreeArmedTrials’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Running examples in ‘threeboost-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: geeboost
> ### Title: GEEBoost
> ### Aliases: geeboost
> 
> ### ** Examples
> 
> # Generate some test data
> library(mvtnorm)
Error: package or namespace load failed for ‘mvtnorm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ThresholdROC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Running examples in ‘threshr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ithresh
> ### Title: Threshold selection in the i.i.d. case (peaks over threshold)
> ### Aliases: ithresh
> 
> ### ** Examples
> 
> # Note:
> # 1. Smoother plots result from making n larger than the default n = 1000.
> # 2. In the examples below validation thresholds rather higher than is
> #    advisable have been used, with far fewer excesses than the minimum of
> #    50 suggested by Jonathan and Ewans (2013).
> 
> ## North Sea significant wave heights, default prior -----------------------
> #' # A plot akin to the top left of Figure 7 in Northrop et al. (2017)
> #' # ... but with fewer training thresholds
> 
> u_vec_ns <- quantile(ns, probs = seq(0.05, 0.95, by = 0.1))
> ns_cv <- ithresh(data = ns, u_vec = u_vec_ns, n_v = 3)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: ithresh ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘threshr-vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘thriftr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rly/libs/rly.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rly/libs/rly.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tibble’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tibbletime’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tibbrConnector’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘TiddlyWikiR_getting_started.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘TideCurves’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/chron/libs/chron.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/chron/libs/chron.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘TideTables’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/chron/libs/chron.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/chron/libs/chron.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tidybayes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tidyboot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tidycensus’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tidygenomics’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tidygraph’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tidyhydat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tidyimpute’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tidyLPA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tidymodels’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tidyposterior’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tidypredict’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tidyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tidyRSS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tidyselect’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tidystats’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tidystringdist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tidytext’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tidytidbits’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tidytransit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tidytree’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tidyverse’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tidyxl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tiff’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/tiff/libs/tiff.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/tiff/libs/tiff.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tigerhitteR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: abd
Loading required package: nlme
Error: package or namespace load failed for ‘nlme’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘nlme’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tigreBrowserWriter’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tigris’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘tikzDevice’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/filehash/libs/filehash.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/filehash/libs/filehash.so: failed to map segment from shared object
Execution halted
Running examples in ‘TileManager-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: TileScheme
> ### Title: Tile Scheme
> ### Aliases: TileScheme
> 
> ### ** Examples
> 
> # Create an irregularly shaped grid defined by the number of raster cells
> ts1 <- TileScheme(CHMdemo, dimByCell = c(100,120))
Loading required package: raster
Loading required package: sp
Error: package or namespace load failed for ‘sp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Failed with error:  ‘package ‘sp’ could not be loaded’
Error in .requirePackage(package) : 
  unable to find required package ‘raster’
Calls: TileScheme ... .extendsForS3 -> extends -> getClassDef -> .requirePackage
Execution halted
Running examples in ‘tiler-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: tile
> ### Title: Create map tiles
> ### Aliases: tile
> 
> ### ** Examples
> 
> ## Don't show: 
> tmpfiles <- list.files(tempdir(), full.names = TRUE)
> ## End(Don't show)
> # non-geographic/simple CRS
> x <- system.file("maps/map.png", package = "tiler")
> tiles <- file.path(tempdir(), "tiles")
> tile(x, tiles, "2-3")
Creating tiles. Please wait...
Creating tile viewer...
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/png/libs/png.so':
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/png/libs/png.so: failed to map segment from shared object
Calls: tile ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘tiler.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘timechange’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘timelineR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘timelineS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘timeROC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘timeSeq’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gss/libs/gss.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gss/libs/gss.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘TimeSeries.OBeu’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘timetk’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted