TT.test : <anonymous>: no visible global function definition for
  ‘t.test’
TT.test: no visible binding for global variable ‘sd’
TT.test: no visible global function definition for ‘setNames’
kirjelda : combo: no visible binding for global variable ‘sd’
kor.tabel: no visible binding for global variable ‘cor.test’
Undefined global functions or variables:
  cor.test sd setNames t.test
Consider adding
  importFrom("stats", "cor.test", "sd", "setNames", "t.test")
to your NAMESPACE file.
Found the following significant warnings:
  ./shared.h:67:9: warning: result of comparison of constant 2147483648 with expression of type 'int' is always false [-Wtautological-constant-out-of-range-compare]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/praznik.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘praznik’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/praznik/libs/praznik.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/praznik/libs/praznik.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘prcbench’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘prclust’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘prcr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: create_profiles
> ### Title: Create profiles of observed variables using two-step cluster
> ###   analysis
> ### Aliases: create_profiles
> 
> ### ** Examples
> 
> create_profiles(mtcars, disp, hp, wt, n_profiles = 2, to_scale = TRUE)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: create_profiles ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘introduction_to_prcr.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PreciseSums’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/PreciseSums/libs/PreciseSums.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/PreciseSums/libs/PreciseSums.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘precrec’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘predictionInterval’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘prediction’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PredictionR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
gausspred: no visible global function definition for ‘qt’
mvapred: no visible global function definition for ‘qt’
Undefined global functions or variables:
  qt
Consider adding
  importFrom("stats", "qt")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘predkmeans’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Non-standard file/directory found at top level:
  ‘DESCRIPTION.bck’
NB: .First.lib is obsolete and will not be used in R >= 3.0.0
File ‘predmixcor/R/firstlib.r’:
  .First.lib calls:
    cat("predmixcor loaded\n", "COPY RIGHT: Longhai Li\n", "http://math.usask.ca/~longhai\n",     "Type ?begin.predmixcor for help\n", sep = "")

Package startup functions should use ‘packageStartupMessage’ to
  generate messages.
See section ‘Good practice’ in '?.onAttach'.

Predict.mix: no visible global function definition for ‘dbinom’
abs_cor: no visible global function definition for ‘cor’
gen.alpha.IGamma: no visible global function definition for ‘qgamma’
gendata.mix: no visible global function definition for ‘runif’
gendata.mix: no visible global function definition for ‘rbeta’
mh1.unif: no visible global function definition for ‘runif’
train_predict_mix: no visible global function definition for ‘dbinom’
training: no visible global function definition for ‘runif’
training: no visible global function definition for ‘dbinom’
Undefined global functions or variables:
  cor dbinom qgamma rbeta runif
Consider adding
  importFrom("stats", "cor", "dbinom", "qgamma", "rbeta", "runif")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PredPsych’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Running examples in ‘predtoolsTS-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: modl
> ### Title: Building predictive models
> ### Aliases: modl
> 
> ### ** Examples
> 
> p <- prep(AirPassengers)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: prep ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘preference’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘prefeR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mcmc/libs/mcmc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mcmc/libs/mcmc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PreKnitPostHTMLRender’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PReMiuM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘prepdat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘prepplotOverview.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘preprocomb’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘preprosim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘preproviz’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pre’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running ‘test_prereg.R’ [0s/0s]
Running the tests in ‘tests/test_prereg.R’ failed.
Complete output:
  > require("testthat")
  Loading required package: testthat
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  > test_check("prereg")
  Error in test_check("prereg") : could not find function "test_check"
  Execution halted
Non-standard file/directory found at top level:
  ‘COPYRIGHTS’
Copyright information should be in file inst/COPYRIGHTS
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘presens’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PResiduals’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘preText’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘prettydoc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘prettymapr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: mergebbox
> ### Title: Combine bounding boxes
> ### Aliases: mergebbox
> 
> ### ** Examples
> 
> box1 <- searchbbox("wolfville, ns")
Using default API key for pickpoint.io. If batch geocoding, please get your own (free) API key at https://app.pickpoint.io/sign-up
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: searchbbox ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Running ‘test-all.R’ [0s/0s]
Running the tests in ‘tests/test-all.R’ failed.
Complete output:
  > 
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pRF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘interpolation-in-small-samples.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Found the following hidden files and directories:
  data/.Rapp.history
These were most likely included in error. See section ‘Package
structure’ in the ‘Writing R Extensions’ manual.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: directlabels
Error: package or namespace load failed for ‘directlabels’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Error: package ‘directlabels’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘primes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PRIMME’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘prim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘princurve’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
basisplot: no visible global function definition for ‘plot’
basisplot: no visible global function definition for ‘abline’
basisplot: no visible global function definition for ‘text’
basisplot: no visible global function definition for ‘par’
plot.prinsimp: no visible global function definition for ‘screeplot’
plot.simpart: no visible global function definition for ‘par’
position_text: no visible global function definition for ‘par’
position_text: no visible global function definition for ‘strwidth’
simpart.formula: no visible global function definition for ‘terms’
simpart.formula: no visible global function definition for
  ‘model.matrix’
varperc: no visible global function definition for ‘plot’
varperc: no visible global function definition for ‘lines’
varperc: no visible global function definition for ‘text’
varsimp: no visible global function definition for ‘plot’
varsimp: no visible global function definition for ‘points’
varsimp: no visible global function definition for ‘text’
varsimp: no visible global function definition for ‘abline’
Undefined global functions or variables:
  abline lines model.matrix par plot points screeplot strwidth terms
  text
Consider adding
  importFrom("graphics", "abline", "lines", "par", "plot", "points",
             "strwidth", "text")
  importFrom("stats", "model.matrix", "screeplot", "terms")
to your NAMESPACE file.
Error in re-building vignettes:
  ...
Error: processing vignette ‘printr.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Package suggested but not available for checking: ‘gurobi’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘prioritylasso’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘PRISMAstatement-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: prisma
> ### Title: Generate a PRISMA statement flow chart
> ### Aliases: prisma
> 
> ### ** Examples
> 
> prisma(1000, 20, 270, 270, 10, 260, 20, 240, 107)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Calls: prisma ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘PRISMA.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PRISM.forecast’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘prism’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘prisonbrief’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: boot
Loading required package: stats4
Loading required package: lme4
Loading required package: Matrix
Error: package or namespace load failed for ‘Matrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘Matrix’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: combinat

Attaching package: ‘combinat’

The following object is masked from ‘package:utils’:

    combn

Loading required package: fAsianOptions
Loading required package: timeDate
Loading required package: timeSeries
Loading required package: fBasics
Error: package or namespace load failed for ‘fBasics’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatial/libs/spatial.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatial/libs/spatial.so: failed to map segment from shared object
Error: package ‘fBasics’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘processanimateR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘processcheckR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Running examples in ‘processcontrol-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: six_sigma_ctrl_chart
> ### Title: Generate IndX and mR charts.
> ### Aliases: six_sigma_ctrl_chart
> 
> ### ** Examples
> 
> data("spcTimeSeries")
> six_sigma_ctrl_chart(spcTimeSeries)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: six_sigma_ctrl_chart ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘processmapR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘processmonitR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘processx’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/processx/libs/processx.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/processx/libs/processx.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pROC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘prodigenr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘prodlim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘productivity’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lpSolveAPI/libs/lpSolveAPI.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lpSolveAPI/libs/lpSolveAPI.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘productplots’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘profdpm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/profdpm/libs/profdpm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/profdpm/libs/profdpm.so: failed to map segment from shared object
Execution halted
Running examples in ‘profileModel-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: profileModel
> ### Title: Get the profiles of arbitrary objectives for arbitrary
> ###   'glm'-like models
> ### Aliases: profileModel prelim.profiling profiling
> ### Keywords: models
> 
> ### ** Examples
> 
> ## Begin Example 1
> library(MASS)
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘profile’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: FITSio
Loading required package: magicaxis
Error: package or namespace load failed for ‘magicaxis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘magicaxis’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘profr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘proftools-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: filterProfileData
> ### Title: Filter Profile Data
> ### Aliases: filterProfileData
> ### Keywords: programming utilities
> 
> ### ** Examples
> 
> pd <- readProfileData(system.file("samples", "glmEx.out", package="proftools"))
> plotProfileCallGraph(pd)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/graph/libs/BioC_graph.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/graph/libs/BioC_graph.so: failed to map segment from shared object
Calls: plotProfileCallGraph ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘proftools.Rnw’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘prof.tree’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘profvis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘progress’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘proj4’:
 .onLoad failed in loadNamespace() for ‘proj4’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/proj4/libs/proj4.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/proj4/libs/proj4.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ProjectionBasedClustering’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘projections-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: cumulate.projections
> ### Title: Compute cumulative projections
> ### Aliases: cumulate.projections
> 
> ### ** Examples
> 
> 
> if (require(distcrete) &&
+     require(incidence)) {
+ 
+   ## simulate basic epicurve
+   dat <- c(0, 2, 2, 3, 3, 5, 5, 5, 6, 6, 6, 6)
+   i <- incidence(dat)
+ 
+ 
+   ## example with a function for SI
+   si <- distcrete("gamma", interval = 1L,
+                   shape = 1.5,
+                   scale = 2, w = 0)
+   set.seed(1)
+   pred_1 <- project(i, runif(100, 0.8, 1.9), si, n_days = 30)
+   plot_1 <- plot(pred_1)
+ 
+   ## cumulative predictions
+   pred_1_cum <- cumulate(pred_1)
+   pred_1_cum
+   plot(pred_1_cum)
+ }
Loading required package: distcrete
Loading required package: incidence
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: plot ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: triangle
Loading required package: plotly
Loading required package: ggplot2
Error: package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘ggplot2’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘projector’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘projmanr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘projpred’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘ProliferativeIndexVignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘promises’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: fastcluster
Error: package or namespace load failed for ‘fastcluster’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fastcluster/libs/fastcluster.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fastcluster/libs/fastcluster.so: failed to map segment from shared object
Error: package ‘fastcluster’ could not be loaded
Execution halted
Running examples in ‘proportion-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: PlotciAAS
> ### Title: Plot of CI estimation of adjusted ArcSine
> ### Aliases: PlotciAAS
> 
> ### ** Examples
> 
> n=5; alp=0.05;h=2
> PlotciAAS(n,alp,h)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: PlotciAAS ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘propr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
addpi: no visible global function definition for ‘lines’
genPerms: no visible global function definition for ‘combn’
getVar: no visible global function definition for ‘glm’
getVar: no visible global function definition for ‘binomial’
getVar: no visible global function definition for ‘var’
pba: no visible global function definition for ‘glm’
pba: no visible global function definition for ‘binomial’
pba: no visible global function definition for ‘predict’
pba: no visible global function definition for ‘rbinom’
pcr: no visible global function definition for ‘quantile’
plotpi: no visible global function definition for ‘plot’
plotpi: no visible global function definition for ‘axis’
plotpi: no visible global function definition for ‘abline’
plotpi: no visible global function definition for ‘lines’
Undefined global functions or variables:
  abline axis binomial combn glm lines plot predict quantile rbinom var
Consider adding
  importFrom("graphics", "abline", "axis", "lines", "plot")
  importFrom("stats", "binomial", "glm", "predict", "quantile", "rbinom",
             "var")
  importFrom("utils", "combn")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘proPubBills’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PROreg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘instrument-descriptions.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Intro_to_PROscorerTools.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: RcppArmadillo
Error: package or namespace load failed for ‘RcppArmadillo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘RcppArmadillo’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘proteomics’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘protiq’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘protoclust’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/protoclust/libs/protoclust.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/protoclust/libs/protoclust.so: failed to map segment from shared object
Execution halted
Extract_plant_grapevine_function: no visible global function definition
  for ‘na.omit’
Undefined global functions or variables:
  na.omit
Consider adding
  importFrom("stats", "na.omit")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘protolite’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘proton’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: intervals
Error: package or namespace load failed for ‘intervals’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/intervals/libs/intervals.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/intervals/libs/intervals.so: failed to map segment from shared object
Error: package ‘intervals’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: audio
Error: package or namespace load failed for ‘audio’:
 .onLoad failed in loadNamespace() for ‘audio’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/audio/libs/audio.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/audio/libs/audio.so: failed to map segment from shared object
Error: package ‘audio’ could not be loaded
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘protr.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘protViz’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘proustr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SnowballC/libs/SnowballC.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SnowballC/libs/SnowballC.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘provenance’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘proxy’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/proxy/libs/proxy.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/proxy/libs/proxy.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘prozor’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘prrd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running ‘all_tests.R’ [0s/0s]
Running the tests in ‘tests/all_tests.R’ failed.
Complete output:
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Error in re-building vignettes:
  ...

Error: processing vignette ‘PRROC.Rnw’ failed with diagnostics:
 chunk 47 
Error : package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pRSR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/pRSR/libs/pRSR.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/pRSR/libs/pRSR.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pryr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: PogromcyDanych
Loading required package: dplyr
Error: package or namespace load failed for ‘dplyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Error: package ‘dplyr’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: LearnBayes
Loading required package: SuppDists
Error: package or namespace load failed for ‘SuppDists’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SuppDists/libs/SuppDists.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SuppDists/libs/SuppDists.so: failed to map segment from shared object
Error: package ‘SuppDists’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PSCBS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pscl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pscore’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘psda-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: pfreq
> ### Title: Polygonal Symbolic Relative Frequency
> ### Aliases: pfreq
> 
> ### ** Examples
> 
> x <- psim(10, 3) #simulate 10 polygons of 3 sides
> frequency <- pfreq(x)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sp/libs/sp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sp/libs/sp.so: failed to map segment from shared object
Calls: pfreq ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘psData’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘psd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pseudorank’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: KMsurv
Loading required package: geepack
Error: package or namespace load failed for ‘geepack’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geepack/libs/geepack.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geepack/libs/geepack.so: failed to map segment from shared object
Error: package ‘geepack’ could not be loaded
Execution halted
Running ‘simulation-study.R’ [2s/2s]
  Running ‘testthat.R’ [0s/0s]
Running the tests in ‘tests/simulation-study.R’ failed.
Complete output:
  > ## Simulation study demonstrating that estimation methods work, i.e., estimate the parameters correctly
  > ## This takes a while to run
  > expit <- function(x) exp(x)/(1+exp(x))
  > 
  > library(pseval)
  > library(survival)
  Error: package or namespace load failed for 'survival' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/survival/libs/survival.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/survival/libs/survival.so: failed to map segment from shared object
  Execution halted
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PSF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘psica’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nnet/libs/nnet.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nnet/libs/nnet.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘psidR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PSLM2015’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PSM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
'library' or 'require' call to ‘numDeriv’ in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Package in Depends field not imported from: ‘methods’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
test.problem : g: no visible global function definition for ‘grad’
test.problem: no visible global function definition for ‘new’
psoptim,test.problem-missing-missing-missing-missing: no visible global
  function definition for ‘new’
show,test.result: no visible global function definition for ‘show’
show,test.result: no visible global function definition for ‘sd’
Undefined global functions or variables:
  grad new sd show
Consider adding
  importFrom("methods", "new", "show")
  importFrom("stats", "sd")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pspearman’:
 .onLoad failed in loadNamespace() for ‘pspearman’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/pspearman/libs/pspearman.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/pspearman/libs/pspearman.so: failed to map segment from shared object
Execution halted
Non-standard file/directory found at top level:
  ‘orig’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pspline’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/pspline/libs/pspline.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/pspline/libs/pspline.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PSPManalysis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/PSPManalysis/libs/PSPManalysis.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/PSPManalysis/libs/PSPManalysis.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ps’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ps/libs/ps.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ps/libs/ps.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pssmooth’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pssm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pstest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PSTR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Packages in Depends field not imported from:
  ‘EffectsRelBaseline’ ‘boot’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
catEffectBootAdaptor: no visible binding for global variable ‘sumSqCat’
compExclusionFraction: no visible global function definition for
  ‘rpois’
compExclusionFraction: no visible global function definition for
  ‘t.test’
compExclusionFraction: no visible global function definition for ‘glm’
compExclusionFraction: no visible global function definition for
  ‘anova’
compPowerCatSelectivity: no visible binding for global variable
  ‘fRatioStat’
compPowerGeneralRespDetection: no visible binding for global variable
  ‘sumSqCat’
compPowerRespDetection: no visible binding for global variable
  ‘sumSqCat’
compRejectionFraction: no visible global function definition for
  ‘rpois’
compRejectionFraction: no visible global function definition for
  ‘t.test’
compRejectionFraction: no visible global function definition for ‘glm’
compRejectionFraction: no visible global function definition for
  ‘anova’
simCatResp: no visible global function definition for ‘rpois’
simNormCatResp: no visible global function definition for ‘rnorm’
testCatEffectBoot: no visible global function definition for ‘boot’
Undefined global functions or variables:
  anova boot fRatioStat glm rnorm rpois sumSqCat t.test
Consider adding
  importFrom("stats", "anova", "glm", "rnorm", "rpois", "t.test")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PSW’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘psychmeta’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Malformed Description field: should contain one or more complete sentences.
Packages listed in more than one of Depends, Imports, Suggests, Enhances:
  ‘multilevel’ ‘nlme’
A package should be listed in only one of these fields.
Non-standard file/directory found at top level:
  ‘README.txt’
Loading this package had a fatal error status code 1
Loading log:
Loading required package: multilevel
Loading required package: nlme
Error: package or namespace load failed for ‘nlme’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘nlme’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: flexmix
Loading required package: lattice
Error: package or namespace load failed for ‘lattice’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘lattice’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘psycho’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘psychotools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/psychotools/libs/psychotools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/psychotools/libs/psychotools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘psych’:
 .onLoad failed in loadNamespace() for ‘mnormt’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘psychReport’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PsyControl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘illustrationBONDS.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘psyosphere-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: about common mistakes
> ### Title: Tips to prevent common mistakes
> ### Aliases: about_common_mistakes
> 
> ### ** Examples
> 
> # Example forgetting to use weighted statistics --------------------------------
> data(psyo)
> tracks <- t_speed(psyo)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: t_speed ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Running examples in ‘psyphy-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: SS.RGBcalib
> ### Title: Self-Start Functions for Fitting Luminance vs Grey Level
> ###   Relation on CRT displays
> ### Aliases: SS.RGBcalib SS.calib
> ### Keywords: models nonlinear
> 
> ### ** Examples
> 
> 
> data(RGB)
> 
> #Fitting a single gun
> W.nls <- nls(Lum ~ SS.calib(Blev, k, gamm, GL), data = RGB,
+ 				subset = (Gun == "W"))
> summary(W.nls)

Formula: Lum ~ SS.calib(Blev, k, gamm, GL)

Parameters:
      Estimate Std. Error t value Pr(>|t|)    
Blev   2.64749    0.62011   4.269 0.000461 ***
k    501.51865    1.01610 493.573  < 2e-16 ***
gamm   2.29796    0.01109 207.289  < 2e-16 ***
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1

Residual standard error: 1.43 on 18 degrees of freedom

Number of iterations to convergence: 3 
Achieved convergence tolerance: 5.47e-06

> 
> #curvature (parameter effect) is greater when GL is 0:255
> Wc.nls <- nls(Lum ~ SS.calib(Blev, k, gamm, GL*255), data = RGB,
+ 				subset = (Gun == "W"))
> MASS::rms.curv(W.nls)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: :: ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PTE’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pterrace’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ptest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  pinpolyhedronA.cc:594:7: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
  pinpolyhedronA.cc:1766:5: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/ptinpoly.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: misc3d
Error: package or namespace load failed for ‘ptinpoly’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ptinpoly/libs/ptinpoly.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ptinpoly/libs/ptinpoly.so: failed to map segment from shared object
Execution halted
Running examples in ‘ptstem-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ptstem_words
> ### Title: Stem Words
> ### Aliases: ptstem ptstem_words
> 
> ### ** Examples
> 
> words <- c("balões", "aviões", "avião", "gostou", "gosto", "gostaram")
> ptstem_words(words, "hunspell")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: ptstem_words ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘ptstem.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ptw’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nloptr/libs/nloptr.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nloptr/libs/nloptr.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PTXQC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ptycho’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Packages in Depends field not imported from:
  ‘R.utils’ ‘rmeta’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
ChisqTest_expect: no visible global function definition for ‘pchisq’
plot_chase_observed_expected: no visible global function definition for
  ‘meta.MH’
plot_chase_observed_expected: no visible global function definition for
  ‘txtProgressBar’
plot_chase_observed_expected: no visible global function definition for
  ‘setTxtProgressBar’
test.one.treated: no visible global function definition for
  ‘fisher.test’
test_one: no visible global function definition for ‘rbinom’
test_one: no visible global function definition for ‘fisher.test’
Undefined global functions or variables:
  fisher.test meta.MH pchisq rbinom setTxtProgressBar txtProgressBar
Consider adding
  importFrom("stats", "fisher.test", "pchisq", "rbinom")
  importFrom("utils", "setTxtProgressBar", "txtProgressBar")
to your NAMESPACE file.
Running examples in ‘pubchunks-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: pub_chunks
> ### Title: Extract chunks of data from articles
> ### Aliases: pub_chunks
> 
> ### ** Examples
> 
> # a file path to an XML file
> x <- system.file("examples/elsevier_1.xml", package = "pubchunks")
> pub_chunks(x, "title")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: pub_chunks ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pubmed.mineR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PubMedWordcloud’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PUlasso’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pulsar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘puniform’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running ‘purged.filesizes.R’ [0s/0s]
  Running ‘testthat.R’ [0s/0s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Running examples in ‘purging-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: purge.negbin
> ### Title: Purges mediator effects between two independent variables
> ###   (negative binomial)
> ### Aliases: purge.negbin
> 
> ### ** Examples
> 
> df <- data.frame(A = c(1,1,1,1,2,2,3,3,4,5), B = 1:10) # negative binomial/counts example
> purge.negbin(df, "A", "B")
Error: Package "MASS" needed for this function to work. Please install it.
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘purrrlyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘purrr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: dcmle
Loading required package: dclone
Loading required package: coda
Error: package or namespace load failed for ‘coda’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘coda’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pvar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pvclass’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PVR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pvsR’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PWD’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PWEALL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pwrFDR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/pwrFDR/libs/pwrFDR.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/pwrFDR/libs/pwrFDR.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘pwr-vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: httr
Loading required package: rjstat
Error: package or namespace load failed for ‘rjstat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so: failed to map segment from shared object
Error: package ‘rjstat’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pxweb’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RJSONIO/libs/RJSONIO.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RJSONIO/libs/RJSONIO.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘pyinit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/robustbase/libs/robustbase.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/robustbase/libs/robustbase.so: failed to map segment from shared object
Execution halted
pyramid: no visible global function definition for ‘plot’
pyramid: no visible global function definition for ‘segments’
pyramid: no visible global function definition for ‘lines’
pyramid: no visible global function definition for ‘text’
pyramid: no visible global function definition for ‘rect’
pyramidf: no visible global function definition for ‘segments’
pyramidf: no visible global function definition for ‘lines’
pyramidf: no visible global function definition for ‘text’
pyramidf: no visible global function definition for ‘rect’
Undefined global functions or variables:
  lines plot rect segments text
Consider adding
  importFrom("graphics", "lines", "plot", "rect", "segments", "text")
to your NAMESPACE file.
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘pysd2r.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘PythonInR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/PythonInR/libs/PythonInR.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/PythonInR/libs/PythonInR.so: failed to map segment from shared object
Execution halted
Running examples in ‘pzfx-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: pzfx_tables
> ### Title: List all tables in a 'GraphPad Prism' '.pzfx' file.
> ### Aliases: pzfx_tables
> 
> ### ** Examples
> 
> pzfx_file <- system.file("extdata/exponential_decay.pzfx", package = "pzfx", mustWork = TRUE)
> pzfx_tables(pzfx_file)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: pzfx_tables ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘pzfx.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/qap/libs/qap.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/qap/libs/qap.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ncdf4/libs/ncdf4.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ncdf4/libs/ncdf4.so: failed to map segment from shared object
Execution halted
csQCAbinTest: no visible global function definition for ‘p.adjust’
fsQCApermTest: no visible global function definition for ‘p.adjust’
mvQCAbinTest: no visible global function definition for ‘p.adjust’
p.threshold.adjust: no visible global function definition for
  ‘p.adjust’
plot.fsQCApt: no visible global function definition for ‘dev.cur’
plot.fsQCApt: no visible global function definition for ‘dev.new’
plot.fsQCApt: no visible global function definition for ‘par’
plot.fsQCApt: no visible global function definition for ‘plot’
plot.fsQCApt: no visible global function definition for ‘density’
plot.fsQCApt: no visible global function definition for ‘axis’
plot.fsQCApt: no visible global function definition for ‘polygon’
plot.fsQCApt: no visible global function definition for ‘points’
plot.fsQCApt: no visible global function definition for ‘hist’
summary.csQCAbt: no visible global function definition for
  ‘printCoefmat’
summary.fsQCApt: no visible global function definition for
  ‘printCoefmat’
summary.mvQCAbt: no visible global function definition for
  ‘printCoefmat’
Undefined global functions or variables:
  axis density dev.cur dev.new hist p.adjust par plot points polygon
  printCoefmat
Consider adding
  importFrom("grDevices", "dev.cur", "dev.new")
  importFrom("graphics", "axis", "hist", "par", "plot", "points",
             "polygon")
  importFrom("stats", "density", "p.adjust", "printCoefmat")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘QCApro’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lpSolve/libs/lpSolve.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lpSolve/libs/lpSolve.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘QCA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘QCAtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qcc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qccrs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qcQpcr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: qcc
Error: package or namespace load failed for ‘qcc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘qcc’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘QCSimulator’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: qdapDictionaries
Loading required package: qdapRegex
Loading required package: qdapTools
Error: package or namespace load failed for ‘qdapTools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Error: package ‘qdapTools’ could not be loaded
Execution halted
Running examples in ‘qdapRegex-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: S
> ### Title: Use C-style String Formatting Commands
> ### Aliases: S
> 
> ### ** Examples
> 
> S("@after_", "the", "the")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: S ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qdapTools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Running examples in ‘QFASA-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: p.QFASA
> ### Title: Computes the diet estimate for each predator in seal.mat using
> ###   either the Kullback-Leibler Distance (KL), the Aitchison Distance
> ###   (AIT) or the Chi-Square Distance (CS).
> ### Aliases: p.QFASA
> 
> ### ** Examples
> 
>  ## Fatty Acids
>  data(FAset)
>  fa.set = as.vector(unlist(FAset))
>  
>  ## Predators
>  data(predatorFAs)
>  tombstone.info = predatorFAs[,1:4]
>  predator.matrix = predatorFAs[,5:(ncol(predatorFAs))]
>  npredators = nrow(predator.matrix)
> 
>  ## Prey
>  data(preyFAs)
>  prey.sub=(preyFAs[,4:(ncol(preyFAs))])[fa.set]
>  prey.sub=prey.sub/apply(prey.sub,1,sum) 
>  group=as.vector(preyFAs$Species)
>  prey.matrix=cbind(group,prey.sub)
>  prey.matrix=MEANmeth(prey.matrix) 
> 
>  FC = preyFAs[,c(2,3)] 
>  FC = as.vector(tapply(FC$lipid,FC$Species,mean,na.rm=TRUE))
> 
>  ## Calibration Coefficients
>  data(CC)
>  cal.vec = CC[,2]
>  cal.mat = replicate(npredators, cal.vec)
> 
>  # Run QFASA
>  Q = p.QFASA(predator.matrix,
+              prey.matrix,
+              cal.mat,
+              dist.meas=1, 
+              gamma=1,
+              FC,
+              start.val = rep(1,nrow(prey.matrix)),
+              fa.set)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/truncnorm/libs/truncnorm.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/truncnorm/libs/truncnorm.so: failed to map segment from shared object
Calls: p.QFASA ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Running examples in ‘qfasar-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: cc_aug
> ### Title: Calibration coefficient for an augmented signature proportion
> ### Aliases: cc_aug
> 
> ### ** Examples
> 
> cc_aug(sig_rep = matrix(c(0.05, 0.10, 0.30, 0.55,
+                           0.04, 0.11, 0.29, 0.56,
+                           0.10, 0.05, 0.35, 0.50), ncol = 3),
+        sig_scale = matrix(c(0.40, 0.50, 0.10,
+                             0.45, 0.49, 0.06,
+                             0.35, 0.45, 0.20), ncol = 3),
+        cc_all = c(0.75, 1.05, 1.86, 0.80),
+        use_fa = c(FALSE, FALSE, TRUE, TRUE))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/truncnorm/libs/truncnorm.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/truncnorm/libs/truncnorm.so: failed to map segment from shared object
Calls: cc_aug ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘qfasar.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qGaussian’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘QGglmm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qgraph’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘QICD’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/QICD/libs/QICD.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/QICD/libs/QICD.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qicharts2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qicharts’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Package suggested but not available for checking: ‘biom’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qiimer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘qiitr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: qiita_util
> ### Title: Generate Payload And Tag For Qiita API
> ### Aliases: qiita_util qiita_util_payload qiita_util_tag
> 
> ### ** Examples
> 
> qiita_util_tag(name = "R", versions = ">3.1")
$name
[1] "R"

$versions
[1] ">3.1"

attr(,"class")
[1] "qiita_tag" "list"     
> 
> qiita_util_payload(body = "foo",
+                    title = "test",
+                    tags = list(
+                      qiita_util_tag(name = "R", versions = ">3.1"),
+                      qiita_util_tag(name = "dplyr")
+                    ),
+                    private = TRUE)
Warning in structure(x, class = unique(c("AsIs", oldClass(x)))) :
  Calling 'structure(NULL, *)' is deprecated, as NULL cannot have attributes.
  Consider 'structure(list(), *)' instead.
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Calls: qiita_util_payload ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qkerntool’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qlcData’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qlcVisualize’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so: failed to map segment from shared object
Execution halted
chooseMDoubleBootstrap: no visible global function definition for
  ‘model.matrix’
chooseMDoubleBootstrap: no visible global function definition for
  ‘as.formula’
chooseMDoubleBootstrap: no visible global function definition for
  ‘model.frame’
chooseMDoubleBootstrap: no visible global function definition for ‘lm’
chooseMDoubleBootstrap: no visible global function definition for
  ‘coef’
chooseMDoubleBootstrap: no visible global function definition for
  ‘quantile’
chooseMDoubleBootstrap: no visible global function definition for
  ‘qnorm’
getModel: no visible global function definition for ‘lm’
getModel: no visible global function definition for ‘model.matrix’
getModel: no visible global function definition for ‘as.formula’
getModel: no visible global function definition for ‘model.frame’
getModel: no visible global function definition for ‘model.response’
getModel: no visible global function definition for ‘coef’
getModel: no visible global function definition for ‘qnorm’
qLearn: no visible global function definition for ‘model.matrix’
qLearn: no visible global function definition for ‘as.formula’
qLearn: no visible global function definition for ‘model.frame’
qLearn: no visible global function definition for ‘coef’
qLearn: no visible global function definition for ‘lm’
qLearn: no visible global function definition for ‘quantile’
Undefined global functions or variables:
  as.formula coef lm model.frame model.matrix model.response qnorm
  quantile
Consider adding
  importFrom("stats", "as.formula", "coef", "lm", "model.frame",
             "model.matrix", "model.response", "qnorm", "quantile")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: parallel
Error: package or namespace load failed for ‘qle’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qmethod’:
 .onLoad failed in loadNamespace() for ‘mnormt’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so: failed to map segment from shared object
Execution halted
pcAxisCubeMake: no visible global function definition for ‘aggregate’
pcAxisCubeToCSV: no visible global function definition for ‘write.csv’
Undefined global functions or variables:
  aggregate write.csv
Consider adding
  importFrom("stats", "aggregate")
  importFrom("utils", "write.csv")
to your NAMESPACE file.
Running examples in ‘qoma.smuggler-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: List-class
> ### Title: Mutable list
> ### Aliases: List-class List
> 
> ### ** Examples
> 
> # set FAME monthly date range January 2018 to December 2018
> rng <- to_fame_range(rhli::HMONTH,"18m1","18m12")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rhli/libs/rhli.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rhli/libs/rhli.so: failed to map segment from shared object
Calls: to_fame_range ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: quantspec
Loading required package: stats4
Error: package or namespace load failed for ‘quantspec’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘quantspec’ could not be loaded
Execution halted
Found the following apparent S3 methods exported but not registered:
  plot.CT
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
NB: .First.lib is obsolete and will not be used in R >= 3.0.0

Calc.Expr: no visible global function definition for ‘read.csv’
Calc.Expr: no visible binding for global variable ‘Type’
Calc.Expr: no visible binding for global variable ‘Identifier’
Calc.Expr: no visible binding for global variable ‘Fluor’
GroupPlot: no visible global function definition for ‘read.csv’
GroupPlot: no visible binding for global variable ‘Type’
GroupPlot: no visible global function definition for
  ‘aggregate.data.frame’
plot.CT: no visible global function definition for ‘sd’
plot.CT: no visible global function definition for ‘barplot’
plot.CT: no visible binding for global variable ‘tr_gene_name’
plot.CT : errorbars: no visible global function definition for ‘arrows’
plot.CT: no visible global function definition for ‘box’
Undefined global functions or variables:
  Fluor Identifier Type aggregate.data.frame arrows barplot box
  read.csv sd tr_gene_name
Consider adding
  importFrom("graphics", "arrows", "barplot", "box")
  importFrom("stats", "aggregate.data.frame", "sd")
  importFrom("utils", "read.csv")
to your NAMESPACE file.
prepare_Rd: Calc.Expr.Rd:38-40: Dropping empty section \details
prepare_Rd: Calc.Expr.Rd:41-47: Dropping empty section \value
prepare_Rd: Calc.Expr.Rd:54-56: Dropping empty section \note
prepare_Rd: Calc.Expr.Rd:48-50: Dropping empty section \references
prepare_Rd: Calc.Expr.Rd:60-62: Dropping empty section \seealso
prepare_Rd: GroupPlot.Rd:34-36: Dropping empty section \details
prepare_Rd: GroupPlot.Rd:37-43: Dropping empty section \value
prepare_Rd: GroupPlot.Rd:50-52: Dropping empty section \note
prepare_Rd: GroupPlot.Rd:44-46: Dropping empty section \references
prepare_Rd: GroupPlot.Rd:56-58: Dropping empty section \seealso
prepare_Rd: cal.CT.Rd:18-20: Dropping empty section \details
prepare_Rd: cal.CT.Rd:21-23: Dropping empty section \source
prepare_Rd: cal_ct.Rd:48-50: Dropping empty section \note
prepare_Rd: cal_ct.Rd:42-44: Dropping empty section \references
prepare_Rd: cal_ct.Rd:54-56: Dropping empty section \seealso
prepare_Rd: filename.Rd:16-18: Dropping empty section \references
prepare_Rd: plot.CT.Rd:25-27: Dropping empty section \details
prepare_Rd: plot.CT.Rd:28-34: Dropping empty section \value
prepare_Rd: plot.CT.Rd:41-43: Dropping empty section \note
prepare_Rd: plot.CT.Rd:35-37: Dropping empty section \references
prepare_Rd: plot.CT.Rd:47-49: Dropping empty section \seealso
prepare_Rd: repeatnum.Rd:15-17: Dropping empty section \details
prepare_Rd: repeatnum.Rd:18-20: Dropping empty section \source
prepare_Rd: repeatnum.Rd:21-23: Dropping empty section \references
prepare_Rd: tr_gene_name.Rd:15-17: Dropping empty section \details
prepare_Rd: tr_gene_name.Rd:18-20: Dropping empty section \source
prepare_Rd: tr_gene_name.Rd:21-23: Dropping empty section \references
prepare_Rd: tr_group_name.Rd:15-17: Dropping empty section \details
prepare_Rd: tr_group_name.Rd:18-20: Dropping empty section \source
prepare_Rd: tr_group_name.Rd:21-23: Dropping empty section \references
Rd file 'Calc.Expr.Rd':
  \usage lines wider than 90 characters:
     Calc.Expr(filename, con_group_name, tr_group_name, con_gene_name = "18s", tr_gene_name, repeatnum = 3, ...)

Rd file 'GroupPlot.Rd':
  \examples lines wider than 100 characters:
     suppressWarnings(aggdata <-aggregate.data.frame(unknown, by=list(unknown$Fluor),FUN=mean, na.rm=TRUE))

These lines will be truncated in the PDF manual.
Found the following significant warnings:
  upwindorderedv4.c:542:54: warning: using floating point absolute value function 'fabs' when argument is of integer type [-Wabsolute-value]
  upwindorderedv4.c:542:72: warning: using floating point absolute value function 'fabs' when argument is of integer type [-Wabsolute-value]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/QPot.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘QPot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/QPot/libs/QPot.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/QPot/libs/QPot.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘qqman.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Running examples in ‘qqtest-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: qkay
> ### Title: 'qkay' The K distribution quantile function
> ### Aliases: qkay
> 
> ### ** Examples
> 
> 
> p <- ppoints(30)
> # Get the quantiles for these points
> q5 <- qkay(p, 5)
> plot(p, q5, main="Quantile plot of K(20)", ylim=c(0,max(q5)))
> # Add quantiles from another K
> points(p, qkay(p, 20), pch=19)
> 
> # 
> # Do these EXACT quantiles from a K(5) look like they might  
> # have been generated from K(20)?
> qqtest(q5, dist="kay",df=20)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: qqtest ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘QRAGadget’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qrage’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘QRank’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘qrcode-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: qrcode_gen
> ### Title: QRcode generator
> ### Aliases: qrcode_gen
> 
> ### ** Examples
> 
> qrcode_gen('www.r-project.org')
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: qrcode_gen ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qrLMM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qrmdata’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qrmix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qrmtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qrng’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/qrng/libs/qrng.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/qrng/libs/qrng.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qrNLMM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qrsvm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qsort’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qsub’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qtbase’:
 .onLoad failed in loadNamespace() for ‘qtbase’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/qtbase/libs/qtbase.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/qtbase/libs/qtbase.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qte’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qtlcharts’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/qtl/libs/qtl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/qtl/libs/qtl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tiff
Error: package or namespace load failed for ‘tiff’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/tiff/libs/tiff.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/tiff/libs/tiff.so: failed to map segment from shared object
Error: package ‘tiff’ could not be loaded
Execution halted
ci.length: no visible global function definition for ‘qexp’
detectable.bc: no visible global function definition for ‘uniroot’
detectable.f2: no visible global function definition for ‘uniroot’
detectable.ri: no visible global function definition for ‘uniroot’
nu: no visible global function definition for ‘pnorm’
nullinfo: no visible global function definition for ‘qnorm’
nullinfo: no visible global function definition for ‘dnorm’
optselection.bc: no visible global function definition for ‘optimize’
optselection.f2: no visible global function definition for ‘optimize’
optspacing.bc: no visible global function definition for ‘optim’
optspacing.bc: no visible global function definition for ‘optimize’
optspacing.f2: no visible global function definition for ‘optim’
optspacing.f2: no visible global function definition for ‘optimize’
powercalc.bc: no visible global function definition for ‘pchisq’
powercalc.f2: no visible global function definition for ‘pchisq’
samplesize.bc: no visible global function definition for ‘uniroot’
samplesize.f2: no visible global function definition for ‘uniroot’
samplesize.ri: no visible global function definition for ‘uniroot’
tailprob: no visible global function definition for ‘pchisq’
thresh: no visible global function definition for ‘uniroot’
Undefined global functions or variables:
  dnorm optim optimize pchisq pnorm qexp qnorm uniroot
Consider adding
  importFrom("stats", "dnorm", "optim", "optimize", "pchisq", "pnorm",
             "qexp", "qnorm", "uniroot")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qtlmt’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/qtlmt/libs/qtlmt.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/qtlmt/libs/qtlmt.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qtl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/qtl/libs/qtl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/qtl/libs/qtl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘QTLRel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Qtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: qtbase
Error: package or namespace load failed for ‘qtbase’:
 .onLoad failed in loadNamespace() for ‘qtbase’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/qtbase/libs/qtbase.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/qtbase/libs/qtbase.so: failed to map segment from shared object
Error: package ‘qtbase’ could not be loaded
Execution halted
Running examples in ‘quadmatrix-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: quadmatrix
> ### Title: Solving Quadratic Matrix Equations
> ### Aliases: quadmatrix
> 
> ### ** Examples
> 
> B = matrix(c(1,3,3,1),nrow = 2,ncol = 2)
> A = matrix(c(1.5,2,2,1.5),nrow = 2,ncol = 2)
> C = matrix(c(1.5,1,1,1.5),nrow = 2,ncol = 2)
> quadmatrix(A,B,C)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geigen/libs/geigen.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geigen/libs/geigen.so: failed to map segment from shared object
Calls: quadmatrix ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘quadmesh’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/png/libs/png.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/png/libs/png.so: failed to map segment from shared object
Execution halted
Non-standard files/directories found at top level:
  ‘LICENSE.GPL-2’ ‘LICENSE.GPL-3’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘quadprog’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Execution halted
Running examples in ‘quadprogXT-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: solveQPXT
> ### Title: Solve a quadratic program with absolute values in constraints &
> ###   objective
> ### Aliases: solveQPXT buildQP
> 
> ### ** Examples
> 
> ##quadprog example"
> Dmat       <- matrix(0,3,3)
> diag(Dmat) <- 1
> dvec       <- c(0,5,0)
> Amat       <- matrix(c(-4,-3,0,2,1,0,0,-2,1),3,3)
> bvec       <- c(-8,2,0)
> qp <- quadprog::solve.QP(Dmat,dvec,Amat,bvec=bvec)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Calls: :: ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘quad’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/PearsonDS/libs/PearsonDS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/PearsonDS/libs/PearsonDS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qualmap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qualpalr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘quantable’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘quanteda’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: units
Error: package or namespace load failed for ‘units’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘units’ could not be loaded
Execution halted
Running examples in ‘QuantNorm-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: QuantNorm
> ### Title: Adjust the distance matrix by quantile normalization for data
> ###   with batch effect
> ### Aliases: QuantNorm
> 
> ### ** Examples
> 
> 
> library(pheatmap) #drawing heatmap
Error: package or namespace load failed for ‘pheatmap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘quantoptr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘quantregRanger’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: stats4
Error: package or namespace load failed for ‘quantspec’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: compiler
Loading required package: foreach
Error: package or namespace load failed for ‘QuantumClone’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/DEoptim/libs/DEoptim.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/DEoptim/libs/DEoptim.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘QuasiSeq’:
 .onLoad failed in loadNamespace() for ‘limma’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/limma/libs/limma.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/limma/libs/limma.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘questionr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘queuecomputer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘quhomology-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: degenerate_homology
> ### Title: Calculates the degenerate Homology for a rack/birack.
> ### Aliases: degenerate_homology
> 
> ### ** Examples
> 
> degenerate_homology(3,3)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: degenerate_homology ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: distances
Error: package or namespace load failed for ‘distances’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/distances/libs/distances.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/distances/libs/distances.so: failed to map segment from shared object
Error: package ‘distances’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘quickmapr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘quickPlot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘quickReg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘QUIC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/QUIC/libs/QUIC.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/QUIC/libs/QUIC.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘quokar’:
 .onLoad failed in loadNamespace() for ‘mnormt’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘quotedargs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quotedargs/libs/quotedargs.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quotedargs/libs/quotedargs.so: failed to map segment from shared object
Execution halted
Running examples in ‘qvcalc-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot.qv
> ### Title: Plot method for objects of class qv
> ### Aliases: plot.qv
> ### Keywords: models hplot
> 
> ### ** Examples
> 
> ##  Overdispersed Poisson loglinear model for ship damage data
> ##  from McCullagh and Nelder (1989), Sec 6.3.2 
> library(MASS)
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘qwraps2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
mutualCoherence : .setOneMutualP: no visible global function definition
  for ‘combn’
Undefined global functions or variables:
  combn
Consider adding
  importFrom("utils", "combn")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘R2admb’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: BayesXsrc
Loading required package: colorspace
Error: package or namespace load failed for ‘colorspace’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/colorspace/libs/colorspace.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/colorspace/libs/colorspace.so: failed to map segment from shared object
Error: package ‘colorspace’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘r2d2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KernSmooth/libs/KernSmooth.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KernSmooth/libs/KernSmooth.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘r2d3’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘R2DGC.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘R2DT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Running examples in ‘r2glmm-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: calc_sgv
> ### Title: Compute the standardized generalized variance (SGV) of a blocked
> ###   diagonal matrix.
> ### Aliases: calc_sgv
> 
> ### ** Examples
> 
> library(Matrix)
Error: package or namespace load failed for ‘Matrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘R2OpenBUGS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: proto
Loading required package: Matrix
Error: package or namespace load failed for ‘Matrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘Matrix’ could not be loaded
Execution halted
Non-standard file/directory found at top level:
  ‘readme’
r2stl: no visible global function definition for ‘persp’
Undefined global functions or variables:
  persp
Consider adding
  importFrom("graphics", "persp")
to your NAMESPACE file.
Rd file 'r2stl.Rd':
  \usage lines wider than 90 characters:
     r2stl(x, y, z, filename = "3d-R-object.stl", object.name = "r2stl-object", z.expand = FALSE, min.height = 0.008, show.persp = FALSE, st ... [TRUNCATED]

These lines will be truncated in the PDF manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘R2SWF’:
 .onLoad failed in loadNamespace() for ‘sysfonts’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sysfonts/libs/sysfonts.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sysfonts/libs/sysfonts.so: failed to map segment from shared object
Execution halted
Running examples in ‘R2ucare-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: marray
> ### Title: m-array: table of first recaptures
> ### Aliases: marray
> ### Keywords: package
> 
> ### ** Examples
> 
> # read in the classical dipper dataset
> dipper = system.file("extdata", "ed.inp", package = "R2ucare")
> dipper = read_inp(dipper,group.df=data.frame(sex=c('Male','Female')))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Calls: read_inp ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘vignette_R2ucare.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: s20x
Loading required package: leaps
Error: package or namespace load failed for ‘leaps’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/leaps/libs/leaps.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/leaps/libs/leaps.so: failed to map segment from shared object
Error: package ‘leaps’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘R3port’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘R4dfp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/R4dfp/libs/R4dfp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/R4dfp/libs/R4dfp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘r4lineups’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘r4ss’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘r511’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Running examples in ‘r6extended-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: r6extended
> ### Title: extended R6 class
> ### Aliases: r6extended
> ### Keywords: data
> 
> ### ** Examples
> 
> 
> # make new
> ext <- r6extended$new()
> 
> # what is there?
> ext$ls()
       name   where    class
1      hash private function
2    hashed private function
3    hashes private     list
4     clone    self function
5     debug    self function
6       get    self function
7   hash_do    self function
8  hash_get    self function
9        ls    self function
10  message    self function
12  warning    self function
11  options    self     list
> 
> # getting things (wherever they are, also private stuff)
> ext$get("options")
$verbose
[1] TRUE

$warning
[1] TRUE

> ext$get("hashes")
list()
> 
> # messages
> ext$message("Please note ...")
r6extended : Please note ...
> ext$options$verbose <- FALSE
> ext$message("Please note ...")
> 
> # warning
> ext$warning("Beware! ...")
Warning in ext$warning("Beware! ...") : r6extended : Beware! ...
> 
> # build in hashing
> ext$hash_do()
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Calls: <Anonymous> ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rabi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringdist/libs/stringdist.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringdist/libs/stringdist.so: failed to map segment from shared object
Execution halted
Package suggested but not available for checking: ‘scran’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RaceID’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Package suggested but not available for checking: ‘rpvm’
'library' or 'require' call to ‘rpvm’ in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
race : killSlaves.exit: no visible global function definition for
  ‘.PVM.initsend’
race : killSlaves.exit: no visible global function definition for
  ‘.PVM.send’
race : killSlaves.exit: no visible global function definition for
  ‘.PVM.exit’
race: no visible global function definition for ‘.PVM.mytid’
race: no visible global function definition for ‘.PVM.spawn’
race: no visible global function definition for ‘.PVM.initsend’
race: no visible global function definition for ‘.PVM.pkstrvec’
race: no visible global function definition for ‘.PVM.send’
race: no visible global function definition for ‘.PVM.recv’
race: no visible global function definition for ‘.PVM.bufinfo’
race: no visible global function definition for ‘.PVM.upkstrvec’
race : job.start: no visible global function definition for
  ‘.PVM.initsend’
race : job.start: no visible global function definition for
  ‘.PVM.pkint’
race : job.start: no visible global function definition for ‘.PVM.send’
race : job.wait: no visible global function definition for ‘.PVM.recv’
race : job.wait: no visible global function definition for
  ‘.PVM.bufinfo’
race : job.wait: no visible global function definition for
  ‘.PVM.upkint’
race : job.wait: no visible global function definition for
  ‘.PVM.upkdblvec’
race : aux2.friedman: no visible global function definition for
  ‘pchisq’
race : aux2.friedman: no visible global function definition for ‘qt’
race : aux.friedman: no visible global function definition for
  ‘wilcox.test’
race : aux.ttest: no visible global function definition for ‘t.test’
race : aux.ttest: no visible global function definition for ‘p.adjust’
Undefined global functions or variables:
  .PVM.bufinfo .PVM.exit .PVM.initsend .PVM.mytid .PVM.pkint
  .PVM.pkstrvec .PVM.recv .PVM.send .PVM.spawn .PVM.upkdblvec
  .PVM.upkint .PVM.upkstrvec p.adjust pchisq qt t.test wilcox.test
Consider adding
  importFrom("stats", "p.adjust", "pchisq", "qt", "t.test",
             "wilcox.test")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RADanalysis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘radarchart’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: radiant.data
Loading required package: magrittr
Loading required package: ggplot2
Error: package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘ggplot2’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: magrittr
Loading required package: ggplot2
Error: package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘ggplot2’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘radiomics’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
getsonde: no visible global function definition for ‘read.table’
plotsonde: no visible global function definition for ‘par’
plotwind: no visible global function definition for ‘plot’
plotwind: no visible global function definition for ‘mtext’
plotwind: no visible global function definition for ‘abline’
skewt.axis: no visible global function definition for ‘par’
skewt.axis: no visible global function definition for ‘plot’
skewt.axis: no visible global function definition for ‘axis’
skewt.axis: no visible global function definition for ‘mtext’
skewt.axis: no visible global function definition for ‘segments’
skewt.axis: no visible global function definition for ‘text’
skewt.axis: no visible global function definition for ‘lines’
skewt.lines: no visible global function definition for ‘lines’
skewt.points: no visible global function definition for ‘points’
station.symbol: no visible global function definition for ‘sd’
station.symbol: no visible global function definition for ‘par’
station.symbol: no visible global function definition for ‘lines’
station.symbol: no visible global function definition for ‘polygon’
station.symbol: no visible global function definition for ‘text’
station.symbol: no visible global function definition for ‘segments’
Undefined global functions or variables:
  abline axis lines mtext par plot points polygon read.table sd
  segments text
Consider adding
  importFrom("graphics", "abline", "axis", "lines", "mtext", "par",
             "plot", "points", "polygon", "segments", "text")
  importFrom("stats", "sd")
  importFrom("utils", "read.table")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: hermite
Loading required package: maxLik
Loading required package: miscTools
Error: package or namespace load failed for ‘maxLik’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘maxLik’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘radix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘radmixture’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘radtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: ReacTran
Loading required package: rootSolve
Error: package or namespace load failed for ‘rootSolve’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rootSolve/libs/rootSolve.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rootSolve/libs/rootSolve.so: failed to map segment from shared object
Error: package ‘rootSolve’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Radviz’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RagGrid’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rags2ridges’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: pracma
Loading required package: RSpincalc
Error: package or namespace load failed for ‘RAHRS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RAHRS/libs/RAHRS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RAHRS/libs/RAHRS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘railtrails’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘raincpc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SDMTools/libs/SDMTools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SDMTools/libs/SDMTools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rainfreq’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Running examples in ‘rakeR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: integerise
> ### Title: integerise
> ### Aliases: integerise integerize
> 
> ### ** Examples
> 
> cons <- data.frame(
+   "zone"      = letters[1:3],
+   "age_0_49"  = c(8, 2, 7),
+   "age_gt_50" = c(4, 8, 4),
+   "sex_f"     = c(6, 6, 8),
+   "sex_m"     = c(6, 4, 3),
+   stringsAsFactors = FALSE
+ )
> 
> inds <- data.frame(
+   "id"     = LETTERS[1:5],
+   "age"    = c("age_gt_50", "age_gt_50", "age_0_49", "age_gt_50", "age_0_49"),
+   "sex"    = c("sex_m", "sex_m", "sex_m", "sex_f", "sex_f"),
+   "income" = c(2868, 2474, 2231, 3152, 2473),
+   stringsAsFactors = FALSE
+ )
> vars <- c("age", "sex")
> 
> weights     <- weight(cons = cons, inds = inds, vars = vars)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ipfp/libs/ipfp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ipfp/libs/ipfp.so: failed to map segment from shared object
Calls: weight ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘intro-to-altmetric.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Higher-Order_Functions_for_Parsing_in_R.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rAmCharts’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ramchoice’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ramcmc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘introduction.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RAMP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RAMP/libs/RAMP.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RAMP/libs/RAMP.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: foreach
Loading required package: doParallel
Loading required package: iterators
Loading required package: parallel
Error: package or namespace load failed for ‘ramsvm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ramsvm/libs/ramsvm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ramsvm/libs/ramsvm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘randaes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randaes/libs/randaes.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randaes/libs/randaes.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘randgeo_vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘randNames’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘randomcoloR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RandomFieldsUtils’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RandomFieldsUtils/libs/RandomFieldsUtils.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RandomFieldsUtils/libs/RandomFieldsUtils.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘randomForestExplainer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘randomForest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForest/libs/randomForest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForest/libs/randomForest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘randomForestSRC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForestSRC/libs/randomForestSRC.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForestSRC/libs/randomForestSRC.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘randomizationInference’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/matrixStats/libs/matrixStats.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/matrixStats/libs/matrixStats.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘randomizr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomizr/libs/randomizr.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomizr/libs/randomizr.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘randomNames’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘random’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘randomUniformForest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘randquotes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘randstr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
bartels.rank.test: no visible global function definition for ‘na.omit’
bartels.rank.test: no visible global function definition for ‘pbeta’
bartels.rank.test: no visible global function definition for ‘pnorm’
cox.stuart.test: no visible global function definition for ‘pbinom’
difference.sign.test: no visible global function definition for
  ‘na.omit’
difference.sign.test: no visible global function definition for ‘pnorm’
rank.test: no visible global function definition for ‘na.omit’
rank.test: no visible global function definition for ‘pnorm’
rruns: no visible global function definition for ‘runif’
runs.test: no visible global function definition for ‘median’
runs.test: no visible global function definition for ‘na.omit’
runs.test: no visible global function definition for ‘points’
runs.test: no visible global function definition for ‘abline’
runs.test: no visible global function definition for ‘gray’
runs.test: no visible global function definition for ‘pnorm’
turning.point.test: no visible global function definition for ‘embed’
turning.point.test: no visible global function definition for ‘pnorm’
Undefined global functions or variables:
  abline embed gray median na.omit pbeta pbinom pnorm points runif
Consider adding
  importFrom("grDevices", "gray")
  importFrom("graphics", "abline", "points")
  importFrom("stats", "embed", "median", "na.omit", "pbeta", "pbinom",
             "pnorm", "runif")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rngWELL
Error: package or namespace load failed for ‘rngWELL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rngWELL/libs/rngWELL.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rngWELL/libs/rngWELL.so: failed to map segment from shared object
Error: package ‘rngWELL’ could not be loaded
Execution halted
Running examples in ‘rangeModelMetadata-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: rmmToCSV
> ### Title: Create .csv File From rangeModelMetaData Object
> ### Aliases: rmmToCSV
> 
> ### ** Examples
> 
> rmm=rmmTemplate()
> rasterFiles=list.files(path=paste(system.file(package='dismo'), '/ex', sep=''),
+                        pattern='grd', full.names=TRUE)
> #make a stack of the rasters
> env=raster::stack(rasterFiles)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sp/libs/sp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sp/libs/sp.so: failed to map segment from shared object
Calls: :: ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘rmm_Multispecies.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ranger’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RanglaPunjab’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jpeg/libs/jpeg.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jpeg/libs/jpeg.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RankAggreg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rankcluster’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rankdist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rankFD’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rankhazard’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
rank.L2R: no visible global function definition for ‘kmeans’
rank.L2R: no visible global function definition for ‘pnorm’
rank.LN: no visible global function definition for ‘kmeans’
rank.LN: no visible global function definition for ‘pnorm’
rank.gs: no visible global function definition for ‘qnorm’
rank.wald: no visible global function definition for ‘qnorm’
Undefined global functions or variables:
  kmeans pnorm qnorm
Consider adding
  importFrom("stats", "kmeans", "pnorm", "qnorm")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RANKS’:
 .onLoad failed in loadNamespace() for ‘limma’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/limma/libs/limma.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/limma/libs/limma.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RANN.L1’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RANN.L1/libs/RANN.L1.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RANN.L1/libs/RANN.L1.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RANN’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RANN/libs/RANN.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RANN/libs/RANN.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RApiDatetime’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RApiDatetime/libs/RApiDatetime.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RApiDatetime/libs/RApiDatetime.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rapidraker’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RAPIDR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/S4Vectors/libs/S4Vectors.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/S4Vectors/libs/S4Vectors.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RApiSerialize’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RApiSerialize/libs/RApiSerialize.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RApiSerialize/libs/RApiSerialize.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tools
Error: package or namespace load failed for ‘RAppArmor’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RAppArmor/libs/RAppArmor.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RAppArmor/libs/RAppArmor.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rappdirs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rappdirs/libs/rappdirs.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rappdirs/libs/rappdirs.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rapport’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
fnRAP: no visible global function definition for ‘chisq.test’
fnRAP: no visible global function definition for ‘combn’
Undefined global functions or variables:
  chisq.test combn
Consider adding
  importFrom("stats", "chisq.test")
  importFrom("utils", "combn")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RAPTOR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: RColorBrewer
Error: package or namespace load failed for ‘RArcInfo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RArcInfo/libs/RArcInfo.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RArcInfo/libs/RArcInfo.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rareGE’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rare’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rarhsmm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rARPACK’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RaschSampler’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RaschSampler/libs/RaschSampler.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RaschSampler/libs/RaschSampler.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rasclass’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rasterKernelEstimates’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ratematrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
rateratio.test: no visible global function definition for
  ‘complete.cases’
rateratio.test: no visible global function definition for ‘pbinom’
rateratio.test : p.L: no visible global function definition for ‘qbeta’
rateratio.test : p.U: no visible global function definition for ‘qbeta’
Undefined global functions or variables:
  complete.cases pbinom qbeta
Consider adding
  importFrom("stats", "complete.cases", "pbinom", "qbeta")
to your NAMESPACE file.
concordance: no visible global function definition for ‘quantile’
concordance : Normal: no visible global function definition for ‘qnorm’
concordance : Normal: no visible global function definition for ‘pnorm’
concordance : MC: no visible global function definition for ‘rmultinom’
concordance : MC: no visible global function definition for ‘quantile’
concordance: no visible global function definition for ‘qnorm’
concordance: no visible global function definition for ‘pnorm’
concordance : Chisq: no visible global function definition for ‘qchisq’
concordance : Chisq: no visible global function definition for ‘pchisq’
concordance : Normal2: no visible global function definition for
  ‘qnorm’
concordance : Normal2: no visible global function definition for
  ‘pnorm’
concordance : MC2: no visible global function definition for
  ‘rmultinom’
concordance : MC2: no visible global function definition for ‘quantile’
wlin.conc: no visible global function definition for ‘quantile’
wlin.conc : MC: no visible global function definition for ‘rmultinom’
wlin.conc : MC: no visible global function definition for ‘quantile’
wquad.conc: no visible global function definition for ‘quantile’
wquad.conc : MC: no visible global function definition for ‘rmultinom’
wquad.conc : MC: no visible global function definition for ‘quantile’
Undefined global functions or variables:
  pchisq pnorm qchisq qnorm quantile rmultinom
Consider adding
  importFrom("stats", "pchisq", "pnorm", "qchisq", "qnorm", "quantile",
             "rmultinom")
to your NAMESPACE file.
.GCD: no visible global function definition for ‘as.polynomial’
.LCM: no visible global function definition for ‘as.polynomial’
.is_zero_polynomial: no visible global function definition for ‘coef’
.poly2expr: no visible global function definition for ‘coef’
integral.rationalfun: no visible global function definition for ‘coef’
integraterf.transcendent: no visible global function definition for
  ‘coef’
rationalfun: no visible global function definition for ‘polynomial’
rationalfun.poly: no visible global function definition for
  ‘polynomial’
rationalfun.poly: no visible global function definition for
  ‘is.polynomial’
rfun: no visible global function definition for ‘polynomial’
rfun.poly: no visible global function definition for ‘polynomial’
rfun.poly: no visible global function definition for ‘is.polynomial’
simplify: no visible global function definition for ‘coef’
simplify: no visible global function definition for ‘polynomial’
Undefined global functions or variables:
  as.polynomial coef is.polynomial polynomial
Consider adding
  importFrom("stats", "coef")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ratios’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rattle’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tcltk
Error: package or namespace load failed for ‘rAverage’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rAverage/libs/rAverage.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rAverage/libs/rAverage.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rAvis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘raw.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rayshader’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rbacon’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: refGenome
Loading required package: doBy
Error: package or namespace load failed for ‘doBy’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘doBy’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rBayesianOptimization’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rbefdata’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rBeta2009’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rBeta2009/libs/rBeta2009.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rBeta2009/libs/rBeta2009.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rbgs’:
 .onLoad failed in loadNamespace() for ‘Rbgs’, details:
  call: NULL
  error: .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rbhl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rbi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rbison’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/maps/libs/maps.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/maps/libs/maps.so: failed to map segment from shared object
Execution halted
Running examples in ‘RBitmoji-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: get_comic
> ### Title: Get Bitmoji comic
> ### Aliases: get_comic
> 
> ### ** Examples
> 
> # ID obtained using get_id()
> my_id <- "1551b314-5e8a-4477-aca2-088c05963111-v1"
> get_comic(my_id, tag = "edvard")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/png/libs/png.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/png/libs/png.so: failed to map segment from shared object
Calls: get_comic ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘RBitmoji.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rblpapi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RBMRB’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rbokeh’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  rcppPredict.cc:60:12: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/Rborist.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rbraries’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rbtc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gmp/libs/gmp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gmp/libs/gmp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rbtt’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
':::' call which should be '::': ‘tools:::file_path_as_absolute’
  See the note in ?`:::` about the use of this operator.
Unexported object imported by a ':::' call: ‘tools:::file_test’
  See the note in ?`:::` about the use of this operator.
Found the following apparent S3 methods exported but not registered:
  print.rbugs
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
genBugsScript: no visible global function definition for ‘runif’
getBugsOutput: no visible global function definition for ‘read.table’
rbugs2coda: no visible global function definition for ‘as.mcmc’
rbugs2coda: no visible global function definition for ‘mcmc’
rbugs2coda: no visible global function definition for ‘as.mcmc.list’
Undefined global functions or variables:
  as.mcmc as.mcmc.list mcmc read.table runif
Consider adding
  importFrom("stats", "runif")
  importFrom("utils", "read.table")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: devtools
Error: package or namespace load failed for ‘devtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Error: package ‘devtools’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rbvs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rbvs/libs/rbvs.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rbvs/libs/rbvs.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘R.cache’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘rcane.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rcan’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcarbon’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘RCarb-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: model_DoseRate
> ### Title: Model dose rate evolution in carbonate-rich samples
> ### Aliases: model_DoseRate
> ### Keywords: dplot manip
> 
> ### ** Examples
> 
> ##load example data
> data("Example_Data", envir = environment())
> 
> ##run the function for one sample from
> ##the dataset
> model_DoseRate(
+ data = Example_Data[14,],
+ n.MC = 2,
+ txtProgressBar = FALSE
+ )
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: model_DoseRate ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcartocolor’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: RColorBrewer
Loading required package: maptools
Loading required package: sp
Error: package or namespace load failed for ‘sp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘sp’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RCassandra’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RCassandra/libs/RCassandra.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RCassandra/libs/RCassandra.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rCAT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘rccdates.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcdd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rcdd/libs/rcdd.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rcdd/libs/rcdd.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rcdklibs
Loading required package: rJava
Error: package or namespace load failed for ‘rJava’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Error: package ‘rJava’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcextTools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rchallenge’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rchess’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rchie’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RchivalTag’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RChronoModel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hdrcde/libs/hdrcde.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hdrcde/libs/hdrcde.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcicr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘bulk_analysis.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rclean’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RClickhouse’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rclimateca’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: climdex.pcic
Loading required package: PCICt
Error: package or namespace load failed for ‘PCICt’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/PCICt/libs/PCICt.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/PCICt/libs/PCICt.so: failed to map segment from shared object
Error: package ‘PCICt’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rClinicalCodes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rclipboard’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘RClone_qmsevpops.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
cmaOptimDP: no visible global function definition for ‘flush.console’
Undefined global functions or variables:
  flush.console
Consider adding
  importFrom("utils", "flush.console")
to your NAMESPACE file.
Running examples in ‘rCMA-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: cmaCalcFitness
> ### Title: Calculate the fitness of a population.
> ### Aliases: cmaCalcFitness
> 
> ### ** Examples
> 
> cma <- cmaNew();
Error: .onLoad failed in loadNamespace() for 'rJava', details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcmdcheck’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/processx/libs/processx.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/processx/libs/processx.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcmdrPlugin.aRnova’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Depends: includes the non-default packages:
  'biclust', 'fabia', 'iBBiG', 'superbiclust', 'BcDiag', 'rqubic',
  'BicARE', 's4vd', 'BiBitR'
Adding so many packages to the search path is excessive and importing
selectively is preferable.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: biclust
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: Rcmdr
Loading required package: splines
Loading required package: RcmdrMisc
Loading required package: car
Loading required package: carData
Error: package or namespace load failed for ‘car’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Error: package ‘car’ could not be loaded
Execution halted
Namespace with empty importFrom: ‘tcltk’
Loading this package had a fatal error status code 1
Loading log:
Loading required package: R2HTML
Loading required package: abind
Loading required package: ez
Error: package or namespace load failed for ‘ez’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘ez’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcmdrPlugin.EZR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcmdrPlugin.FuzzyClust’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: GWRM
Loading required package: RcmdrMisc
Loading required package: car
Loading required package: carData
Error: package or namespace load failed for ‘car’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Error: package ‘car’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: HH
Loading required package: lattice
Error: package or namespace load failed for ‘lattice’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘lattice’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcmdrPlugin.IPSUR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: grid
Loading required package: Rcmdr
Loading required package: splines
Loading required package: RcmdrMisc
Loading required package: car
Loading required package: carData
Error: package or namespace load failed for ‘car’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Error: package ‘car’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: lfstat
Loading required package: xts
Loading required package: zoo
Error: package or namespace load failed for ‘zoo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘zoo’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcmdrPlugin.MA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: ENmisc
Loading required package: Hmisc
Loading required package: lattice
Error: package or namespace load failed for ‘lattice’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘lattice’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: mixlm
Error: package or namespace load failed for ‘mixlm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Error: package ‘mixlm’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcmdrPlugin.PcaRobust’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tcltk
Loading required package: Rcmdr
Loading required package: splines
Loading required package: RcmdrMisc
Loading required package: car
Loading required package: carData
Error: package or namespace load failed for ‘car’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Error: package ‘car’ could not be loaded
Execution halted
Namespaces with empty importFrom:
  ‘stats’ ‘tcltk’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcmdrPlugin.qual’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcmdrPlugin.RMTCJags’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: SCVA
Loading required package: SCRT
Loading required package: SCMA
Error: package or namespace load failed for ‘RcmdrPlugin.SCDA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: SLC
Error: package or namespace load failed for ‘RcmdrPlugin.SLC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: sos
Loading required package: brew

Attaching package: ‘sos’

The following object is masked from ‘package:utils’:

    ?

Error: package or namespace load failed for ‘RcmdrPlugin.sos’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: randtests
Loading required package: TeachingDemos
Loading required package: tseries
Error: package or namespace load failed for ‘tseries’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Error: package ‘tseries’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: splines
Loading required package: RcmdrMisc
Loading required package: car
Loading required package: carData
Error: package or namespace load failed for ‘car’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Error: package ‘car’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RCMIP5’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘Rcolombos-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: listOrganisms
> ### Title: Returns a character vector corresponding to the currently
> ###   available organisms.
> ### Aliases: listOrganisms
> 
> ### ** Examples
> 
> library('Rcolombos')
> listOrganisms()
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Calls: listOrganisms ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
brewer.pal: no visible global function definition for ‘rgb’
display.brewer.all: no visible global function definition for ‘par’
display.brewer.all: no visible global function definition for ‘plot’
display.brewer.all: no visible global function definition for ‘rect’
display.brewer.all: no visible global function definition for ‘text’
display.brewer.pal: no visible global function definition for ‘image’
Undefined global functions or variables:
  image par plot rect rgb text
Consider adding
  importFrom("grDevices", "rgb")
  importFrom("graphics", "image", "par", "plot", "rect", "text")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcompanion’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
addLine: no visible global function definition for ‘abline’
ellipse: no visible global function definition for ‘approx’
ellipse: no visible global function definition for ‘tail’
Undefined global functions or variables:
  abline approx tail
Consider adding
  importFrom("graphics", "abline")
  importFrom("stats", "approx")
  importFrom("utils", "tail")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcoreoa’:
 .onLoad failed in loadNamespace() for ‘rcoreoa’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rappdirs/libs/rappdirs.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rappdirs/libs/rappdirs.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcorpora’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcosmo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RCPmod’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppAlgos’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppAnnoy’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppAPT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppArmadillo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppBDT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Found the following warnings:
  ../inst/include/blaze/math/smp/openmp/Functions.h:98:1: warning: control may reach end of non-void function [-Wreturn-type]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/RcppBlaze.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppBlaze’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppCCTZ’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppClassicExamples’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppClassic’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppCNPy’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppCWB’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppDE’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppDist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppDL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppEigenAD’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppEigen’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppEnsmallen’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppExamples’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppFaddeeva’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppGetconf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppGreedySetCover’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppGSL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppHMM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppHoney’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppMeCab’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppMLPACK’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppMsgPack’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppNLoptExample’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nloptr/libs/nloptr.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nloptr/libs/nloptr.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppNumerical’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppParallel’:
 .onLoad failed in loadNamespace() for ‘RcppParallel’, details:
  call: dyn.load(tbb, local = FALSE, now = TRUE)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/lib/libtbb.so.2’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/lib/libtbb.so.2: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppQuantuccia’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rcpp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppRedis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppRoll’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppSMC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppStreams’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppTN’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppTOML’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running ‘testthat.R’ [0s/0s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > Sys.setenv("R_TESTS" = "")
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RcppZiggurat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rcrawler’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘rcreds.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rCRM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcrossref’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcrtan’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Running examples in ‘RCrypto-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: CoinMarketCap_All
> ### Title: 'Coinamrketcap' All Currencies
> ### Aliases: CoinMarketCap_All
> 
> ### ** Examples
> 
> MyData <- CoinMarketCap_All(currency = "CAD")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Calls: CoinMarketCap_All ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rcsdp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcsdp/libs/Rcsdp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcsdp/libs/Rcsdp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RCSF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Rcssplot.Rnw’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcss’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcure’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Non-standard files/directories found at top level:
  ‘Changes.html’ ‘CodeGeneration’ ‘README.windows’ ‘Todo.html’
  ‘dynGC.R’ ‘encoding.R’ ‘exampleCode’ ‘getURL.html’ ‘libcurlLicense’
  ‘post.R’ ‘postForm.html’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rcv’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RCzechia’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Rd2roxygen.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rdatacite’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rdbnomics’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rddapp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rddensity’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rDEA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rdefra’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘rde_tutorial.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
distimage: no visible binding for global variable ‘terrain.colors’
distimage: no visible global function definition for ‘filled.contour’
distimage: no visible global function definition for ‘title’
distimage: no visible global function definition for ‘axis’
distimage: no visible global function definition for ‘lines’
drawkpc: no visible global function definition for ‘plot’
drawkpc: no visible global function definition for ‘segments’
drawkpc: no visible global function definition for ‘lines’
modelimage: no visible binding for global variable ‘topo.colors’
modelimage: no visible global function definition for ‘filled.contour’
modelimage: no visible global function definition for ‘title’
modelimage: no visible global function definition for ‘axis’
modelimage: no visible global function definition for ‘lines’
sincdata: no visible global function definition for ‘runif’
sincdata: no visible global function definition for ‘rnorm’
Undefined global functions or variables:
  axis filled.contour lines plot rnorm runif segments terrain.colors
  title topo.colors
Consider adding
  importFrom("grDevices", "terrain.colors", "topo.colors")
  importFrom("graphics", "axis", "filled.contour", "lines", "plot",
             "segments", "title")
  importFrom("stats", "rnorm", "runif")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘R.devices’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rdflib’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rdfp’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rdian’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rdice’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
sumry_categorical: no visible global function definition for ‘freq’
sumry_continous: no visible global function definition for ‘quantile’
Undefined global functions or variables:
  freq quantile
Consider adding
  importFrom("stats", "quantile")
to your NAMESPACE file.
Running examples in ‘RDIDQ-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: sumry_categorical
> ### Title: Summary of categorical variable
> ### Aliases: sumry_categorical
> 
> ### ** Examples
> 
> library(descr)
Error: package or namespace load failed for ‘descr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/descr/libs/descr.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/descr/libs/descr.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RDieHarder’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RDieHarder/libs/RDieHarder.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RDieHarder/libs/RDieHarder.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rdimtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rdi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Rdistance_BeginnerLineTransectCovar.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  dist.cpp:19:33: warning: explicitly assigning value of variable of type 'float' to itself [-Wself-assign]
  dist.cpp:65:33: warning: explicitly assigning value of variable of type 'float' to itself [-Wself-assign]
  dist.cpp:111:36: warning: explicitly assigning value of variable of type 'float' to itself [-Wself-assign]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/rdist.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rdist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rdiversity’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RDML’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rdnb’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RDocumentation’:
 .onLoad failed in loadNamespace() for ‘rjson’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rjson/libs/rjson.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rjson/libs/rjson.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘RDota2.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rDotNet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rdoxygen’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rdoxygen/libs/rdoxygen.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rdoxygen/libs/rdoxygen.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rdpack’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rdpla’:
 .onLoad failed in loadNamespace() for ‘rdpla’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rappdirs/libs/rappdirs.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rappdirs/libs/rappdirs.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rdryad’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rdsdp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rdsdp/libs/Rdsdp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rdsdp/libs/Rdsdp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rdsm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RDS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Warning: namespace ‘gtools’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘gtools’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘gtools’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘gtools’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
See chapter ‘System and foreign language interfaces’ in the ‘Writing R
Extensions’ manual.
Warning: namespace ‘gtools’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘gtools’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘gtools’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘gtools’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Running examples in ‘rdtLite-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: prov.json
> ### Title: Provenance Access Functions
> ### Aliases: prov.json prov.dir
> 
> ### ** Examples
> 
> prov.init()
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rdtq’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘re2r’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reactR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘readbitmap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jpeg/libs/jpeg.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jpeg/libs/jpeg.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘read.dbc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/read.dbc/libs/read.dbc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/read.dbc/libs/read.dbc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘readit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘readJDX’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘readMLData’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘readMzXmlData’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘readobj’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘readODS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Running examples in ‘readOffice-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: read_docx
> ### Title: Read data from a Modern Word File
> ### Aliases: read_docx
> 
> ### ** Examples
> 
> read_docx(docx = system.file('extdata','example.docx',package='readOffice'))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: read_docx ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Running examples in ‘readroper-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: read_rpr
> ### Title: Reads Roper Center datasets
> ### Aliases: read_rpr
> 
> ### ** Examples
> 
> fwf_sample <- readroper_example('testMultiCard.txt')
> cat(readr::read_lines(fwf_sample))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: cat ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘readroper.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘readr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘readstata13’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘readtext’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘readxl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘realestateDK-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: BM010
> ### Title: Property prices in housing market
> ### Aliases: BM010
> 
> ### ** Examples
> 
> realestateDK::BM010(EJKAT20 = "1", OMR20 = "00", PRIS20 = "UDBUD", Tid = "1992K1")
Error in is.url(url) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Calls: <Anonymous> ... suppressMessages -> withCallingHandlers -> retrieve_metadata
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘realestateDK.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Non-standard file/directory found at top level:
  ‘devel’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rebird’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rebmix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Running examples in ‘rebus.base-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: Anchors
> ### Title: The start or end of a string.
> ### Aliases: Anchors START END exactly
> ### Keywords: datasets
> 
> ### ** Examples
> 
> START
<regex> ^
> END
<regex> $
> 
> # Usage
> x <- c("catfish", "tomcat", "cat")
> (rx_start <- START %R% "cat")
<regex> ^cat
> (rx_end <- "cat" %R% END)
<regex> cat$
> (rx_exact <- exactly("cat"))
<regex> ^cat$
> stringi::stri_detect_regex(x, rx_start)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: :: ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Running examples in ‘RECA-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: rca
> ### Title: Relevant Component Analysis
> ### Aliases: rca
> 
> ### ** Examples
> 
> library("MASS") # generate synthetic multivariate normal data
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: kriging
Error: package or namespace load failed for ‘kriging’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/kriging/libs/kriging.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/kriging/libs/kriging.so: failed to map segment from shared object
Error: package ‘kriging’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rechonest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
ReCiPa: no visible global function definition for ‘count.fields’
ReCiPa: no visible global function definition for ‘read.table’
Undefined global functions or variables:
  count.fields read.table
Consider adding
  importFrom("utils", "count.fields", "read.table")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: recommenderlab
Loading required package: Matrix
Error: package or namespace load failed for ‘Matrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘Matrix’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reconstructr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: DBI
Loading required package: RSQLite
Error: package or namespace load failed for ‘RSQLite’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘RSQLite’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘recosystem’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘recurse’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reda’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘redcapAPI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/chron/libs/chron.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/chron/libs/chron.so: failed to map segment from shared object
Execution halted
Running examples in ‘REDCapR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: redcap_version
> ### Title: Determine version of REDCap instance
> ### Aliases: redcap_version
> 
> ### ** Examples
> 
> library(REDCapR) #Load the package into the current R session.
> uri      <- "https://bbmc.ouhsc.edu/redcap/api/"
> token    <- "9A81268476645C4E5F03428B8AC3AA7B"
> redcap_version(redcap_uri=uri, token=token)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Calls: redcap_version ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘BasicREDCapROperations.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RedditExtractoR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: snowfall
Loading required package: snow
Loading required package: fields
Loading required package: spam
Loading required package: dotCall64
Error: package or namespace load failed for ‘dotCall64’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so: failed to map segment from shared object
Error: package ‘dotCall64’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: REddyProc
Error: package or namespace load failed for ‘REddyProc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Error: package ‘REddyProc’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘REddyProc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘redist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘redland’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rEDM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘red’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘redux’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/redux/libs/redux.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/redux/libs/redux.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘referenceIntervals’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: doBy
Error: package or namespace load failed for ‘doBy’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘doBy’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ref.ICAR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘refimpact.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘refinr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringdist/libs/stringdist.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringdist/libs/stringdist.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RefManageR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘refset.rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘refuge’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘refund’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘refund.shiny’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: bestglm
Loading required package: leaps
Error: package or namespace load failed for ‘leaps’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/leaps/libs/leaps.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/leaps/libs/leaps.so: failed to map segment from shared object
Error: package ‘leaps’ could not be loaded
Execution halted
cluster.reg: no visible global function definition for ‘rnorm’
cluster.reg: no visible global function definition for ‘runif’
Undefined global functions or variables:
  rnorm runif
Consider adding
  importFrom("stats", "rnorm", "runif")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘regexSelect’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘reghelper-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: graph_model
> ### Title: Graph interactions for fitted models.
> ### Aliases: graph_model graph_model.lm graph_model.aov graph_model.glm
> ###   graph_model.lme graph_model.merMod
> 
> ### ** Examples
> 
> # iris data
> model <- lm(Sepal.Width ~ Sepal.Length * Species, data=iris)
> graph_model_q(model, y='Sepal.Width', x='Sepal.Length', lines='Species')
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: graph_model_q ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘regnet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘regplot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: denpro
Error: package or namespace load failed for ‘denpro’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/denpro/libs/denpro.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/denpro/libs/denpro.so: failed to map segment from shared object
Error: package ‘denpro’ could not be loaded
Execution halted
Error in re-building vignettes:
  ...
RegressionFactory 0.7.2
Heart and Lung Institute, Imperial College London &
Scientific Computing Group, Sentrana Inc.

Error: processing vignette ‘RegressionFactory.Rnw’ failed with diagnostics:
 chunk 9 
Error : package or namespace load failed for 'sns' in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Running examples in ‘regress-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: regress
> ### Title: Fit a Gaussian Linear Model with Linear Covariance Structure
> ### Aliases: regress print.regress summary.regress BLUP
> ### Keywords: regression models multivariate
> 
> ### ** Examples
> 
> 
>   ######################
>   ## Comparison with lme
>   ######################
> 
>   ## Example of Random Effects model from Venables and Ripley, page 205
>   library(nlme)
Error: package or namespace load failed for ‘nlme’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘regRSM’:
 .onLoad failed in loadNamespace() for ‘Rmpi’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rmpi/libs/Rmpi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rmpi/libs/Rmpi.so: failed to map segment from shared object
Execution halted
Non-standard files/directories found at top level:
  ‘prebuild.sh’ ‘regtest-Ex.R’
Warning in fun(libname, pkgname) :
  package regtest is under development and still may change considerably

A namespace must be able to be loaded with just the base namespace
loaded: otherwise if the namespace gets loaded by a saved object, the
session will be unable to start.

Probably some imports need to be declared in the NAMESPACE file.
binregtest: no visible global function definition for ‘str’
binregtest: no visible binding for global variable ‘str’
binregtest: no visible global function definition for ‘runif’
Undefined global functions or variables:
  runif str
Consider adding
  importFrom("stats", "runif")
  importFrom("utils", "str")
to your NAMESPACE file.
Rd file 'binregtest.rd':
  \usage lines wider than 90 characters:
     binregtest(FUN1, FUN2, ..., PARS = NULL, PAR1 = NULL, PAR2 = NULL, WHICH = sample(1:n), TRYALL = TRUE, COMP = is.all.equal, NAME = "UNN ... [TRUNCATED]

These lines will be truncated in the PDF manual.
Error in re-building vignettes:
  ...
Error: processing vignette ‘RSCA-vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rehh.data
Loading required package: gplots
Error: package or namespace load failed for ‘gplots’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Error: package ‘gplots’ could not be loaded
Execution halted
Running examples in ‘reinforcedPred-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: modelFit
> ### Title: Model fit for the training set
> ### Aliases: modelFit
> 
> ### ** Examples
> 
> library(reinforcedPred)
> 
> # take the example training data (univariate Z) from the reinforcedPred package
> # see documentation for details about the data set train_data_uniZ
> Y <- as.numeric(train_data_uniZ$Y)
> tildeX.missing <- as.matrix(train_data_uniZ[,2:62])
> Z <- as.numeric(train_data_uniZ$Z)
> 
> # analysis starts
> startT <- 55
> link <- "probit"
> weight <- rep(1, length(Y))
> 
> result <- modelFit(Y, tildeX.missing, Z, startT, link, pve = 0.99, nbasis = 10, weight)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: modelFit ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Running examples in ‘reinforcelearn-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: CliffWalking
> ### Title: Cliff Walking
> ### Aliases: CliffWalking cliff.walking
> 
> ### ** Examples
> 
> env = makeEnvironment("cliff.walking")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so: failed to map segment from shared object
Calls: makeEnvironment ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘agents.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘ReinforcementLearning-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ReinforcementLearning
> ### Title: Performs reinforcement learning
> ### Aliases: ReinforcementLearning rl
> 
> ### ** Examples
> 
> # Sampling data (1000 grid sequences)
> data <- sampleGridSequence(1000)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Calls: sampleGridSequence ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘ReinforcementLearning.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ReIns’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘restrictions.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Relatedness’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Relatedness/libs/Relatedness.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Relatedness/libs/Relatedness.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘relations’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sets/libs/sets.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sets/libs/sets.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reldist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: trust
Loading required package: sna
Loading required package: statnet.common
Error: package or namespace load failed for ‘statnet.common’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘statnet.common’ could not be loaded
Execution halted
Running ‘testthat.R’ [0s/0s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > require(testthat)
  Loading required package: testthat
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  > require(RelimpPCR)
  Loading required package: RelimpPCR
  > test_check("RelimpPCR")
  Error in test_check("RelimpPCR") : could not find function "test_check"
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘relSim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rematch2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘remedy’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘remindR_vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘remMap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/remMap/libs/remMap.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/remMap/libs/remMap.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘remoter’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/argon2/libs/argon2.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/argon2/libs/argon2.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘dependencies.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rem’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rENA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘REndo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: gWidgets
Loading required package: gWidgetstcltk
Loading required package: tcltk
Loading required package: digest
Error: package or namespace load failed for ‘digest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Error: package ‘digest’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rentrez’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Running examples in ‘Renvlp-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: boot.senv
> ### Title: Bootstrap for senv
> ### Aliases: boot.senv
> 
> ### ** Examples
> 
> data(sales)
> X <- sales[, 1:3]
> Y <- sales[, 4:7]
> 
> u <- u.senv(X, Y)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/truncnorm/libs/truncnorm.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/truncnorm/libs/truncnorm.so: failed to map segment from shared object
Calls: u.senv ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Renvlp.Rnw’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  gar.c:356:29: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
  gar.c:356:80: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/repeated.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘repfdr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘repijson’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/network/libs/network.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/network/libs/network.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘REPLesentR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: spatstat.utils
Error: package or namespace load failed for ‘spatstat.utils’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so: failed to map segment from shared object
Error: package ‘spatstat.utils’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Replicate’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘replicationInterval’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: wrapr
Error: package or namespace load failed for ‘replyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘repmis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘repolr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘repo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reportReg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reportROC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reportr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ore/libs/ore.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ore/libs/ore.so: failed to map segment from shared object
Execution halted
delete: no visible global function definition for ‘menu’
doc_temp: no visible global function definition for ‘menu’
html5: no visible global function definition for ‘na.omit’
install_pandoc: no visible global function definition for
  ‘download.file’
new_report: no visible global function definition for ‘tail’
new_report: no visible global function definition for ‘head’
new_report: no visible global function definition for ‘menu’
presentation: no visible global function definition for ‘head’
presentation: no visible global function definition for ‘tail’
presentation: no visible global function definition for ‘menu’
repo2github: no visible global function definition for ‘download.file’
repo2github: no visible global function definition for ‘unzip’
reveal.js: no visible global function definition for ‘na.omit’
update_bib: no visible global function definition for ‘tail’
update_bib: no visible global function definition for ‘menu’
Undefined global functions or variables:
  download.file head menu na.omit tail unzip
Consider adding
  importFrom("stats", "na.omit")
  importFrom("utils", "download.file", "head", "menu", "tail", "unzip")
to your NAMESPACE file.
MBoxtest: no visible global function definition for ‘var’
jrparams: no visible global function definition for ‘prcomp’
jrparams: no visible global function definition for ‘predict’
jrparams: no visible global function definition for ‘qchisq’
jrparams: no visible global function definition for ‘qf’
Undefined global functions or variables:
  prcomp predict qchisq qf var
Consider adding
  importFrom("stats", "prcomp", "predict", "qchisq", "qf", "var")
to your NAMESPACE file.
Rd file 'jrparams.Rd':
  \usage lines wider than 90 characters:
     jrparams(BLOCK.1, BLOCK.2, ncomp = min(c(dim(BLOCK.1), dim(BLOCK.2))), Cscrit=0.6, Rscrit=0.6)

These lines will be truncated in the PDF manual.
Error in re-building vignettes:
  ...
Error: processing vignette ‘represtools.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reprex’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘reproducer-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ExtractMAStatistics
> ### Title: ExtractMAStatistics
> ### Aliases: ExtractMAStatistics
> 
> ### ** Examples
> 
> ExpData=reproducer::KitchenhamMadeyskiBrereton.ExpData
> #Extract the experiment basic statics
> S1data=subset(ExpData,ExpData=="S1")
> #Use the descriptive data to construct effect size
> S1EffectSizes = reproducer::PrepareForMetaAnalysisGtoR(S1data$Mc,
+ S1data$Mt,S1data$SDc,S1data$SDt,S1data$Nc,S1data$Nt)
> # Do a random effect meta-analysis of the transformed r_pbs effect size
> S1MA = metafor::rma(S1EffectSizes$zr, S1EffectSizes$vi)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: :: ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reproducible’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘repr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Running examples in ‘REPTILE-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: REPTILE-package
> ### Title: Regulatory Element Prediction
> ### Aliases: REPTILE-package REPTILE
> 
> ### ** Examples
> 
> library("REPTILE")
> data("rsd")
> 
> ## Training (needs a few minutes and ~1.8 Gb memory)
> reptile.model <- reptile_train(rsd$training_data$region_epimark,
+                                rsd$training_data$region_label,
+                                rsd$training_data$DMR_epimark,
+                                rsd$training_data$DMR_label,
+                                ntree=50)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForest/libs/randomForest.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForest/libs/randomForest.so: failed to map segment from shared object
Calls: reptile_train ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘repurrrsive’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reqres’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/brotli/libs/brotli.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/brotli/libs/brotli.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: httr
Error: package or namespace load failed for ‘request’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘requireR.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rerddap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reReg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rerf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rERR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
.resampleMakeFunction: no visible global function definition for ‘is’
.resampleSetSeed: no visible global function definition for ‘runif’
CI.bca: no visible global function definition for ‘is’
CI.bca: no visible global function definition for ‘qnorm’
CI.bca: no visible global function definition for ‘pnorm’
CI.t: no visible global function definition for ‘qt’
ExpandProbs: no visible global function definition for ‘pnorm’
ExpandProbs: no visible global function definition for ‘qt’
colVars : f: no visible global function definition for ‘var’
colVars: no visible global function definition for ‘var’
hist.resample: no visible global function definition for ‘density’
hist.resample: no visible global function definition for ‘lines’
hist.resample: no visible global function definition for ‘points’
hist.resample: no visible global function definition for ‘approx’
hist.resample: no visible global function definition for ‘segments’
resample: no visible global function definition for ‘is’
samp.bootknife: no visible global function definition for ‘runif’
samp.bootstrap: no visible global function definition for ‘runif’
Undefined global functions or variables:
  approx density is lines pnorm points qnorm qt runif segments var
Consider adding
  importFrom("graphics", "lines", "points", "segments")
  importFrom("methods", "is")
  importFrom("stats", "approx", "density", "pnorm", "qnorm", "qt",
             "runif", "var")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Running ‘runTests.R’ [0s/0s]
Running the tests in ‘tests/runTests.R’ failed.
Complete output:
  > # Copyright 2014 Google Inc. All rights reserved.
  > #
  > # Use of this source code is governed by a BSD-style
  > # license that can be found in the LICENSE file or at
  > # http://opensource.org/licenses/BSD-3-Clause
  > 
  > # Run all .t tests in tests/
  > 
  > require("splus2R")
  Loading required package: splus2R
  Error: package or namespace load failed for 'splus2R' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/splus2R/libs/splus2R.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/splus2R/libs/splus2R.so: failed to map segment from shared object
  > 
  > files <- list.files(pattern = "\\.t$")
  > 
  > for(file in files)
  +   do.test(file)
  Error in do.test(file) : could not find function "do.test"
  Execution halted
Found the following significant warnings:
  regalg.cpp:215:10: warning: explicitly assigning value of variable of type 'arma::mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  regalg.cpp:454:10: warning: explicitly assigning value of variable of type 'arma::mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/resemble.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘resemble’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reshape2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Non-standard file/directory found at top level:
  ‘load.r’
Loading this package had a fatal error status code 1
Loading log:
Loading required package: reshape2
Error: package or namespace load failed for ‘reshape2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘reshape2’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reshape’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Rd file 'array.resistance.Rd':
  \usage lines wider than 90 characters:
     array.resistance(x.offset, y.offset, rows.of.resistors, cols.of.resistors, give.pots = FALSE)

These lines will be truncated in the PDF manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ResourceSelection’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘respirometry-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: RQ
> ### Title: Calculate respiratory quotient
> ### Aliases: RQ
> 
> ### ** Examples
> 
> o2_observations <- c(21, 18, 14.5, 7)
> pH_observations <- c(8.05, 7.98, 7.86, 7.65)
> TA_observations <- c(2222, 2219, 2208, 2214)
> 
> RQ(o2 = o2_observations, o2_unit = 'kPa', pH = pH_observations,
+ TA = TA_observations, temp = 20, sal = 33)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: RQ ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Running examples in ‘restez-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: count_db_ids
> ### Title: Return the number of ids
> ### Aliases: count_db_ids
> 
> ### ** Examples
> 
> library(restez)
> restez_path_set(filepath = tempdir())
... Creating '/tmp/RtmpjggcJZ/restez'
... Creating '/tmp/RtmpjggcJZ/restez/downloads'
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Calls: restez_path_set ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘restfulr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘restlos’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/som/libs/som.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/som/libs/som.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘REST’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘restrictedMVN’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘restriktor’:
 .onLoad failed in loadNamespace() for ‘mnormt’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘resumer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reticulate’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘retimes’:
 .onLoad failed in loadNamespace() for ‘retimes’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/retimes/libs/retimes.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/retimes/libs/retimes.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘retistruct’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geometry/libs/geometry.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geometry/libs/geometry.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘reutils’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘quickstart.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘revdbayes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘revealjs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RevEcoR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘revengc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘revgeo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘revtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
plot.reweight: no visible global function definition for ‘par’
plot.reweight: no visible global function definition for ‘plot’
plot.reweight: no visible global function definition for ‘density’
plot.reweight: no visible global function definition for ‘rug’
reweight: no visible global function definition for ‘aggregate’
search.best.h: no visible global function definition for ‘quantile’
Undefined global functions or variables:
  aggregate density par plot quantile rug
Consider adding
  importFrom("graphics", "par", "plot", "rug")
  importFrom("stats", "aggregate", "density", "quantile")
to your NAMESPACE file.
Running examples in ‘Rexperigen-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: server.version
> ### Title: Returns the version of an Experigen server
> ### Aliases: server.version
> 
> ### ** Examples
> 
> server.version("db.phonologist.org")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Calls: server.version ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rexpokit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘rex-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: capture
> ### Title: Create a capture group
> ### Aliases: capture . capture_group
> 
> ### ** Examples
> 
> 
> # Match paired quotation marks
> re <- rex(
+   # first quotation mark
+   capture(quotes),
+ 
+   # match all non-matching quotation marks
+   zero_or_more(except(capture_group(1))),
+ 
+   # end quotation mark (matches first)
+   capture_group(1)
+ )
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lazyeval/libs/lazyeval.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lazyeval/libs/lazyeval.so: failed to map segment from shared object
Calls: rex ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘log_parsing.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: httr
Loading required package: rjson
Error: package or namespace load failed for ‘rjson’:
 .onLoad failed in loadNamespace() for ‘rjson’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rjson/libs/rjson.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rjson/libs/rjson.so: failed to map segment from shared object
Error: package ‘rjson’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rfacebookstat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rFerns’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rFerns/libs/rFerns.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rFerns/libs/rFerns.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: bdsmatrix
Error: package or namespace load failed for ‘bdsmatrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bdsmatrix/libs/bdsmatrix.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bdsmatrix/libs/bdsmatrix.so: failed to map segment from shared object
Error: package ‘bdsmatrix’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rfigshare’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RJSONIO/libs/RJSONIO.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RJSONIO/libs/RJSONIO.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: R.oo
Loading required package: R.methodsS3
R.methodsS3 v1.7.1 (2016-02-15) successfully loaded. See ?R.methodsS3 for help.
R.oo v1.22.0 (2018-04-21) successfully loaded. See ?R.oo for help.

Attaching package: ‘R.oo’

The following objects are masked from ‘package:methods’:

    getClasses, getMethods

The following objects are masked from ‘package:base’:

    attach, detach, gc, load, save

Error: package or namespace load failed for ‘R.filesets’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Malformed Description field: should contain one or more complete sentences.
License components which are templates and need '+ file LICENSE':
  BSD 3-clause License
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rfishbase’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Running examples in ‘RFishBC-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: aStandard
> ### Title: Finds standard intercept (a) for Fraser-Lee back-calculation
> ###   model for a particular species.
> ### Aliases: aStandard
> ### Keywords: manip
> 
> ### ** Examples
> 
> aStandard("Bluegill")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: aStandard ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rfisheries’:
 .onLoad failed in loadNamespace() for ‘rjson’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rjson/libs/rjson.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rjson/libs/rjson.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rfit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rfit/libs/Rfit.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rfit/libs/Rfit.so: failed to map segment from shared object
Execution halted
Running examples in ‘RFLPtools-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: RFLPtools-package
> ### Title: Tools to analyse RFLP-data
> ### Aliases: RFLPtools-package RFLPtools
> ### Keywords: package multivariate cluster
> 
> ### ** Examples
> 
> data(RFLPdata)
> res <- RFLPdist(RFLPdata)
> plot(hclust(res[[1]]), main = "Euclidean distance")
> 
> par(mfrow = c(1,2))
> plot(hclust(RFLPdist(RFLPdata, nrBands = 3)), cex = 0.7)
> RFLPplot(RFLPdata, nrBands = 3, mar.bottom = 6, cex.axis = 0.8)
> 
> data(RFLPref)
> RFLPrefplot(RFLPdata, RFLPref, nrBands = 6, cex.axis = 0.8)
> 
> 
> library(MKmisc)
Error: package or namespace load failed for ‘MKmisc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Loading required package: RColorBrewer

Error: processing vignette ‘RFLPtools.Rnw’ failed with diagnostics:
 chunk 5 (label = cor) 
Error : package or namespace load failed for ‘MKmisc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: AUCRF
Loading required package: randomForest
Error: package or namespace load failed for ‘randomForest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForest/libs/randomForest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForest/libs/randomForest.so: failed to map segment from shared object
Error: package ‘randomForest’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rfml’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rfm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rfmtool’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rfmtool/libs/Rfmtool.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rfmtool/libs/Rfmtool.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RFOC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so: failed to map segment from shared object
Execution halted
Running examples in ‘Rfolding-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: folding.statistics
> ### Title: Computes the folding statistics of the input data
> ### Aliases: folding.statistics
> 
> ### ** Examples
> 
> library(MASS)
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘internals.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RForcecom’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rforensicbatwing’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RFreak’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rFSA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rFTRLProximal’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘rfUtilities-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: bivariate.partialDependence
> ### Title: Bivariate partial-dependency plot
> ### Aliases: bivariate.partialDependence
> 
> ### ** Examples
> 
>  library(randomForest)
Error: package or namespace load failed for ‘randomForest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForest/libs/randomForest.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForest/libs/randomForest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: httr
Error: package or namespace load failed for ‘Rga4gh’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
gabriel.plot: no visible global function definition for ‘barplot’
gabriel.plot: no visible global function definition for ‘arrows’
rgabriel: no visible binding for global variable ‘sd’
rgabriel : psmm_x: no visible global function definition for ‘pnorm’
rgabriel : psmm: no visible global function definition for ‘integrate’
rgabriel : qsmm: no visible global function definition for ‘qnorm’
rgabriel : qsmm: no visible global function definition for ‘uniroot’
Undefined global functions or variables:
  arrows barplot integrate pnorm qnorm sd uniroot
Consider adding
  importFrom("graphics", "arrows", "barplot")
  importFrom("stats", "integrate", "pnorm", "qnorm", "sd", "uniroot")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rgam’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RGA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rgbif’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: foreach
Loading required package: plyr
Error: package or namespace load failed for ‘plyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘plyr’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rgbp’:
 .onLoad failed in loadNamespace() for ‘mnormt’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rgb’:
 .onLoad failed in loadNamespace() for ‘Rgb’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rgb/libs/Rgb.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rgb/libs/Rgb.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RGCCA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rgcvpack’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rgcvpack/libs/rgcvpack.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rgcvpack/libs/rgcvpack.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: RMAWGEN
Loading required package: chron
Error: package or namespace load failed for ‘chron’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/chron/libs/chron.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/chron/libs/chron.so: failed to map segment from shared object
Error: package ‘chron’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rgenoud’:
 .onLoad failed in loadNamespace() for ‘rgenoud’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rgenoud/libs/rgenoud.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rgenoud/libs/rgenoud.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘using-samplers.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rgeoapi’:
 .onLoad failed in loadNamespace() for ‘rjson’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rjson/libs/rjson.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rjson/libs/rjson.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rgeolocate’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rgeopat2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rgeos’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RGF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RGtk2/libs/RGtk2.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RGtk2/libs/RGtk2.so: failed to map segment from shared object
Error: package or namespace load failed for ‘rggobi’:
 .onLoad failed in loadNamespace() for ‘RGtk2’, details:
  call: install_all()
  error: This platform is not yet supported by the automatic installer. Please install GTK+ manually, if necessary. See: http://www.gtk.org
In addition: Warning message:
Failed to load RGtk2 dynamic library, attempting to install it. 
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rgho’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rglobi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rgl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rglwidget’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rgnuplot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rgnuplot/libs/Rgnuplot.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rgnuplot/libs/Rgnuplot.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rGoodData’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: httr
Loading required package: lubridate
Error: package or namespace load failed for ‘lubridate’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Error: package ‘lubridate’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RgoogleMaps’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/png/libs/png.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/png/libs/png.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rgoogleslides’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Package suggested but not available for checking: ‘pmg’
Loading this package had a fatal error status code 1
Loading log:
Loading required package: grid
Error: package or namespace load failed for ‘RGraphics’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RGreenplum’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rgretl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rgsp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RGtk2/libs/RGtk2.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RGtk2/libs/RGtk2.so: failed to map segment from shared object
Error: package or namespace load failed for ‘RGtk2’:
 .onLoad failed in loadNamespace() for ‘RGtk2’, details:
  call: install_all()
  error: This platform is not yet supported by the automatic installer. Please install GTK+ manually, if necessary. See: http://www.gtk.org
In addition: Warning message:
Failed to load RGtk2 dynamic library, attempting to install it. 
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rhandsontable’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: bit64
Loading required package: bit
Error: package or namespace load failed for ‘bit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bit/libs/bit.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bit/libs/bit.so: failed to map segment from shared object
Error: package ‘bit’ could not be loaded
Execution halted
Running examples in ‘rhierbaps-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: hierBAPS
> ### Title: hierBAPS
> ### Aliases: hierBAPS
> 
> ### ** Examples
> 
> snp.matrix <- load_fasta(system.file("extdata", "small_seqs.fa", package = "rhierbaps"))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: load_fasta ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rhli’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rhli/libs/rhli.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rhli/libs/rhli.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rhmmer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: pso
Loading required package: Hmisc
Loading required package: lattice
Error: package or namespace load failed for ‘lattice’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘lattice’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RhpcBLASctl’:
 .onLoad failed in loadNamespace() for ‘RhpcBLASctl’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RhpcBLASctl/libs/RhpcBLASctl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RhpcBLASctl/libs/RhpcBLASctl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rhpc’:
 .onLoad failed in loadNamespace() for ‘Rhpc’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rhpc/libs/Rhpc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rhpc/libs/Rhpc.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  filterhr.c:21:11: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
  filterhr.c:21:53: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
  filterhr.c:21:95: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/RHRV.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tcltk
Loading required package: tkrplot
Loading required package: waveslim
Error: package or namespace load failed for ‘waveslim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/waveslim/libs/waveslim.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/waveslim/libs/waveslim.so: failed to map segment from shared object
Error: package ‘waveslim’ could not be loaded
In addition: Warning message:
loading Rplot failed 
Execution halted
RHT.2samp : my.HotellingT2 : my.InvCov2: no visible global function
  definition for ‘cov’
RHT.2samp : get.lambda : get.para: no visible global function
  definition for ‘optimize’
RHT.2samp : get.lambda : gg: no visible global function definition for
  ‘qchisq’
RHT.2samp : get.lambda : ggl: no visible global function definition for
  ‘qnorm’
RHT.2samp : <anonymous>: no visible global function definition for
  ‘cov’
RHT.fun : my.HotellingT : my.InvCov: no visible global function
  definition for ‘cov’
RHT.fun : get.lambda : get.para: no visible global function definition
  for ‘optimize’
RHT.fun : get.lambda : gg: no visible global function definition for
  ‘qchisq’
RHT.fun : get.lambda : ggl: no visible global function definition for
  ‘qnorm’
RHT.fun : <anonymous>: no visible global function definition for ‘cov’
Undefined global functions or variables:
  cov optimize qchisq qnorm
Consider adding
  importFrom("stats", "cov", "optimize", "qchisq", "qnorm")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rhub’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/processx/libs/processx.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/processx/libs/processx.so: failed to map segment from shared object
Execution halted
Running examples in ‘rhymer-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: datamuse_api
> ### Title: Call Datamuse API and return data.
> ### Aliases: datamuse_api
> 
> ### ** Examples
> 
> datamuse_api("/words?rel_rhy=test")
Error in is.url(url) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Calls: datamuse_api ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘intro-to-rhymer.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RI2by2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘RIA.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Ricetl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rich’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ridge’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ridge/libs/ridge.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ridge/libs/ridge.so: failed to map segment from shared object
Execution halted
ridit.raw: no visible global function definition for ‘pchisq’
Undefined global functions or variables:
  pchisq
Consider adding
  importFrom("stats", "pchisq")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RiemBase’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘riem_package.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘rif_vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
R2ngon: no visible global function definition for ‘approx’
plotR2pre: no visible global function definition for ‘plot’
plotR2pre: no visible global function definition for ‘points’
plotR2pre: no visible global function definition for ‘gray’
plotR2pre: no visible global function definition for ‘legend’
plotR2pre: no visible global function definition for ‘rainbow’
Undefined global functions or variables:
  approx gray legend plot points rainbow
Consider adding
  importFrom("grDevices", "gray", "rainbow")
  importFrom("graphics", "legend", "plot", "points")
  importFrom("stats", "approx")
to your NAMESPACE file.
Running ‘testthat.R’ [0s/2s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Running examples in ‘rijkspalette-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: rijksPalette
> ### Title: Rijkspalette function
> ### Aliases: rijksPalette
> 
> ### ** Examples
> 
> pal <- rijksPalette("Vermeer Letter")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Calls: rijksPalette ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rilostat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RImageJROI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RImagePalette’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rinat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Non-standard files/directories found at top level:
  ‘doc’ ‘prebuild.sh’ ‘rindex-Ex.R’
Loading this package had a fatal error status code 1
Loading log:
Loading required package: regtest
package rindex is under development and still may change considerably
Error: package or namespace load failed for ‘rindex’:
 .onLoad failed in loadNamespace() for ‘rindex’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rindex/libs/rindex.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rindex/libs/rindex.so: failed to map segment from shared object
In addition: Warning message:
In fun(libname, pkgname) :
  package regtest is under development and still may change considerably
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ring’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ring/libs/ring.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ring/libs/ring.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RInside’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RInSp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RInSp/libs/RInSp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RInSp/libs/RInSp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rintrojs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rioja’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rio’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rip46’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tcltk
Loading required package: parallel
Error: package or namespace load failed for ‘ripa’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘rIP-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: getIPinfo
> ### Title: Passes an array of IP addresses to iphub.info and returns a
> ###   dataframe with details of IP
> ### Aliases: getIPinfo
> 
> ### ** Examples
> 
> id <- c(1,2,3,4) # fake respondent id's
> ips <- c(123.232, 213.435, 234.764, 543.765) # fake ips
> data <- data.frame(id,ips)
> getIPinfo(data, "ips", "MzI3NDpJcVJKSTdIdXpQSUJLQVhZY1RvRxaXFsFW3jS3xcQ")
* Consider storing the ipDF as an object to write as an external df, e.g., write.csv(ipDF, 'ipDF.csv')

  |                                                                            
  |                                                                      |   0%Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Calls: getIPinfo ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
desmat.sanitize: no visible global function definition for ‘aggregate’
dispdist: no visible global function definition for ‘quantile’
dispdist: no visible global function definition for ‘hist’
dispdist: no visible global function definition for ‘lines’
estate: no visible global function definition for ‘weighted.mean’
estate: no visible global function definition for ‘lm’
genperms: no visible global function definition for ‘combn’
genprobexact: no visible global function definition for ‘ave’
invert.ci: no visible global function definition for ‘quantile’
invert.ci: no visible global function definition for ‘uniroot’
omni.ate: no visible global function definition for ‘hist’
omni.ate: no visible global function definition for ‘lines’
omni.ate: no visible global function definition for ‘quantile’
resresplot: no visible global function definition for ‘lm’
resresplot: no visible global function definition for ‘symbols’
resresplot: no visible global function definition for ‘abline’
Undefined global functions or variables:
  abline aggregate ave combn hist lines lm quantile symbols uniroot
  weighted.mean
Consider adding
  importFrom("graphics", "abline", "hist", "lines", "symbols")
  importFrom("stats", "aggregate", "ave", "lm", "quantile", "uniroot",
             "weighted.mean")
  importFrom("utils", "combn")
to your NAMESPACE file.
Rd file 'genperms.custom.Rd':
  \examples lines wider than 100 characters:
                     teststat <- pf(fstat[1],fstat[2],fstat[3],lower.tail=FALSE)  # extract F-test p-value

Rd file 'genprob.Rd':
  \examples lines wider than 100 characters:
                     teststat <- pf(fstat[1],fstat[2],fstat[3],lower.tail=FALSE)  # extract F-test p-value

These lines will be truncated in the PDF manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rIsing’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘riskPredictClustData’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: Runuran
Error: package or namespace load failed for ‘Runuran’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Runuran/libs/Runuran.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Runuran/libs/Runuran.so: failed to map segment from shared object
Error: package ‘Runuran’ could not be loaded
Execution halted
Running examples in ‘riskyr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot.riskyr
> ### Title: Plot information of a riskyr object.
> ### Aliases: plot.riskyr
> 
> ### ** Examples
> 
> # Select a scenario from list of scenarios:
> s25 <- scenarios$n25  # select scenario 25 from scenarios
> 
> # Plot different types:
> plot(s25)  # => default plot (fnet)
> plot(s25, plot.type = "fnet")  # => network diagram (same as default)
> plot(s25, plot.type = "tree", area = "vr") # => tree diagram (with vertical rectangles)
> plot(s25, plot.type = "curve", what = "all")
> plot(s25, plot.type = "icons")
> plot(s25, plot.type = "icons", type = "mosaic")  # passing on additional parameter to create.
> plot(s25, plot.type = "mosaic")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: plot ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘A_user_guide.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ritis’:
 .onLoad failed in loadNamespace() for ‘ritis’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘riverdist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  rivmech_characteristic_v7.cpp:323:14: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/rivr.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rivr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RJaCGH’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RJaCGH/libs/RJaCGH.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RJaCGH/libs/RJaCGH.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rjade’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RJafroc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Non-standard files/directories found at top level:
  ‘getsp.class’ ‘getsp.java’ ‘install-sh’ ‘jri’ ‘version’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rJava’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rjazz’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: DBI
Loading required package: rJava
Error: package or namespace load failed for ‘rJava’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Error: package ‘rJava’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rje’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rje/libs/rje.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rje/libs/rje.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘r.jive’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: madness
Error: package or namespace load failed for ‘madness’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘madness’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rjsonapi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RJSONIO’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RJSONIO/libs/RJSONIO.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RJSONIO/libs/RJSONIO.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rjson’:
 .onLoad failed in loadNamespace() for ‘rjson’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rjson/libs/rjson.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rjson/libs/rjson.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rjstat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rJST’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJST/libs/rJST.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJST/libs/rJST.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RKEAjars’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RKEA’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RKEELjars’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RKEEL’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Running examples in ‘RKlout-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: RKlout
> ### Title: RKlout
> ### Aliases: RKlout urlGetScore urlNetId
> ### Keywords: package
> 
> ### ** Examples
> 
> ## The inputs which are required for the function to work
>   apiKey <- "ujj8**************wfjw"  ## Api Key received from Klout Developer portal
>   twUser <- "BarackObama" ## The Twitter Username/handle which the 'Klout' score is intended for
> ## Get Klout Score 
>     kloutScore <- RKlout(apiKey,twUser)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Calls: RKlout ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rkvo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
':::' calls which should be '::':
  ‘stats:::dexp’ ‘stats:::dgamma’ ‘stats:::dweibull’ ‘stats:::pexp’
  ‘stats:::pgamma’ ‘stats:::pweibull’ ‘stats:::qexp’ ‘stats:::qgamma’
  ‘stats:::qweibull’ ‘stats:::rexp’ ‘stats:::rgamma’ ‘stats:::rweibull’
  See the note in ?`:::` about the use of this operator.
Error in re-building vignettes:
  ...
Error: processing vignette ‘data.handling.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rLandsat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rlang’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rlas’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rld’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rleafmap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rlecuyer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlecuyer/libs/rlecuyer.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlecuyer/libs/rlecuyer.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: foreach
Loading required package: doParallel
Loading required package: iterators
Loading required package: parallel
Error: package or namespace load failed for ‘rlfsm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rlibeemd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rLiDAR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Found the following Makefile(s) without a final LF:
  src/Makevars.in
Some ‘make’ programs ignore lines not ending in LF.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: httr
Loading required package: XML
Error: package or namespace load failed for ‘XML’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Error: package ‘XML’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rlist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rlmDataDriven’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rlme’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rlm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlm/libs/rlm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlm/libs/rlm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: doParallel
Loading required package: foreach
Loading required package: iterators
Loading required package: parallel
Error: package or namespace load failed for ‘Rlof’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rlof/libs/Rlof.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rlof/libs/Rlof.so: failed to map segment from shared object
Execution halted
Running examples in ‘RLogicalOps-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: processLogiOper
> ### Title: Processing Logical Operations
> ### Aliases: processLogiOper
> 
> ### ** Examples
> 
> logicalOperation <- "AND(Cake,OR(Birthday,Anniversary))"
> stringList <- c("The cake at the birthday was awesome."
+                 ,"Their anniversary was last week.")
> 
> processLogiOper(logicalOperation, stringList)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: processLogiOper ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: PythonInR
Error: package or namespace load failed for ‘PythonInR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/PythonInR/libs/PythonInR.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/PythonInR/libs/PythonInR.so: failed to map segment from shared object
Error: package ‘PythonInR’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RLRsim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RLT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RLT/libs/RLT.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RLT/libs/RLT.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: Luminescence
Loading required package: magrittr
Error: package or namespace load failed for ‘Luminescence’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Error: package ‘Luminescence’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RLumShiny’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rly’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rly/libs/rly.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rly/libs/rly.so: failed to map segment from shared object
Execution halted
Running examples in ‘rma.exact-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: rma.exact
> ### Title: Compute an exact confidence interval for the grand mean in a
> ###   normal-normal random effects meta-analysis.
> ### Aliases: rma.exact
> 
> ### ** Examples
> 
> set.seed(1)
> 
> K <- 5
> c0 <- 1
> mu0 <- 0
> tau2 <- 12.5
> vi <- (seq(1, 5, length=K))^2
> yi <- rnorm(K)*sqrt(vi+tau2)+mu0
> rma.exact(yi=yi,vi=vi)
Warning in yi - mu.fixed.obs :
  Recycling array of length 1 in vector-array arithmetic is deprecated.
  Use c() or as.vector() instead.

      lower    upper
1 -5.387786 5.443314
> 
> ## plotting a conifdence region and printing CIs with an RMA.Exact object
> rma0 <- rma.exact(yi=yi,vi=vi,level=NULL)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: rma.exact ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
ma.filter: no visible global function definition for ‘par’
ma.filter: no visible global function definition for ‘lines’
ma.filter: no visible global function definition for ‘abline’
qn: no visible global function definition for ‘lm’
qn: no visible global function definition for ‘var’
qn: no visible global function definition for ‘resid’
ss.filter: no visible global function definition for ‘smooth.spline’
ss.filter: no visible global function definition for ‘par’
ss.filter: no visible global function definition for ‘lines’
ss.filter: no visible global function definition for ‘abline’
Undefined global functions or variables:
  abline lines lm par resid smooth.spline var
Consider adding
  importFrom("graphics", "abline", "lines", "par")
  importFrom("stats", "lm", "resid", "smooth.spline", "var")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmake’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Found an obsolete/platform-specific call in the following function:
  ‘Mallows’
Found the platform-specific device:
  ‘x11’
dev.new() is the preferred way to open a new device, in the unlikely
event one is needed.
Mallows: no visible global function definition for ‘runif’
Mallows: no visible global function definition for ‘x11’
Mallows: no visible global function definition for ‘plot’
Mallows: no visible global function definition for ‘dev.off’
UpdateLambda: no visible global function definition for ‘uniroot’
Undefined global functions or variables:
  dev.off plot runif uniroot x11
Consider adding
  importFrom("grDevices", "dev.off", "x11")
  importFrom("graphics", "plot")
  importFrom("stats", "runif", "uniroot")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmapshaper’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘rmapzen-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: costing_models
> ### Title: Costing model constructors and helpers
> ### Aliases: costing_models mz_costing mz_costing_options
> ### Keywords: datasets
> 
> ### ** Examples
> 
> ## creates a pedestrian costing model with walking speed of 2 km/hr
> ## that also avoids alleys.
> ## non-multimodal costing models will accept 0 or more options from the
> ## appropriate list.
> mz_costing$pedestrian(
+     mz_costing_options$pedestrian$walking_speed(2.0),
+     mz_costing_options$pedestrian$alley_factor(0)
+ )
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Calls: <Anonymous> ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘rmapzen-introduction.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RMariaDB’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RmarineHeatWaves’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmarkdown’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RMark’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmatio’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘rmcorr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot.rmc
> ### Title: Plot the repeated measures correlation coefficient.
> ### Aliases: plot.rmc
> 
> ### ** Examples
> 
> ## Bland Altman 1995 data
> my.rmc <- rmcorr(participant = Subject, measure1 = PacO2, measure2 = pH, dataset = bland1995)
Warning in rmcorr(participant = Subject, measure1 = PacO2, measure2 = pH,  :
  'Subject' coerced into a factor
Error: .onLoad failed in loadNamespace() for 'mnormt', details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Combined_paper_figures.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RMCriteria’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmda’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmdformats’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: knitr
Loading required package: dplyr
Error: package or namespace load failed for ‘dplyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Error: package ‘dplyr’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmdshower’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RmecabKo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmetalog’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmetasim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rugarch
Loading required package: parallel
Error: package or namespace load failed for ‘rugarch’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/truncnorm/libs/truncnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/truncnorm/libs/truncnorm.so: failed to map segment from shared object
Error: package ‘rugarch’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rminer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: Rmixmod
Loading required package: Rcpp
Error: package or namespace load failed for ‘Rcpp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘Rcpp’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RMKdiscrete’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RMKdiscrete/libs/RMKdiscrete.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RMKdiscrete/libs/RMKdiscrete.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RMOAjars’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: RMOAjars
Error: package or namespace load failed for ‘RMOAjars’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Error: package ‘RMOAjars’ could not be loaded
Execution halted
Running examples in ‘rmonad-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: clear_cache
> ### Title: Clear cached values and delete temporary files
> ### Aliases: clear_cache
> 
> ### ** Examples
> 
> 256 %v>% sqrt %>>% sqrt %>>% sqrt  -> m
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Calls: %>>% ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘cheatsheet.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Non-standard files/directories found at top level:
  ‘COPYING.LGPL’ ‘configure_script.R’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rMouse’:
 .onLoad failed in loadNamespace() for ‘rMouse’, details:
  call: NULL
  error: .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rmpi’:
 .onLoad failed in loadNamespace() for ‘Rmpi’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rmpi/libs/Rmpi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rmpi/libs/Rmpi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmsfuns’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
rms.pval: no visible global function definition for ‘runif’
Undefined global functions or variables:
  runif
Consider adding
  importFrom("stats", "runif")
to your NAMESPACE file.
dWishartSpike: no visible global function definition for ‘dnorm’
pWishartSpike: no visible global function definition for ‘pnorm’
qWishartSpike: no visible global function definition for ‘qnorm’
rWishartSpike: no visible global function definition for ‘qnorm’
rmp: no visible global function definition for ‘runif’
rtw: no visible global function definition for ‘runif’
Undefined global functions or variables:
  dnorm pnorm qnorm runif
Consider adding
  importFrom("stats", "dnorm", "pnorm", "qnorm", "runif")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmumps’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmutil’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rmutil/libs/rmutil.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rmutil/libs/rmutil.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmweather’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: psychotools
Error: package or namespace load failed for ‘psychotools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/psychotools/libs/psychotools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/psychotools/libs/psychotools.so: failed to map segment from shared object
Error: package ‘psychotools’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: DBI
Error: package or namespace load failed for ‘RMySQL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RMySQL/libs/RMySQL.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RMySQL/libs/RMySQL.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rmytarget’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: ecodist
Error: package or namespace load failed for ‘ecodist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ecodist/libs/ecodist.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ecodist/libs/ecodist.so: failed to map segment from shared object
Error: package ‘ecodist’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rnaturalearthdata’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Package suggested but not available for checking: ‘rnaturalearthhires’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rnaturalearth’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rncl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘RndTexExams-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: engine.analyze.class.exam
> ### Title: Function that breaks latex file of exam class exam into a
> ###   dataframe (internal use)
> ### Aliases: engine.analyze.class.exam
> 
> ### ** Examples
> 
> f.in <- system.file("extdata", "MyRandomTest_exam.tex", package = "RndTexExams")
> my.text <- stringi::stri_read_lines(f.in)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: :: ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘rte-vignette_creating_exams.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rnetcarto’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rnetcarto/libs/rnetcarto.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rnetcarto/libs/rnetcarto.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RNetCDF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RNetCDF/libs/RNetCDF.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RNetCDF/libs/RNetCDF.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RNGforGPD’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/VGAM/libs/VGAM.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/VGAM/libs/VGAM.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rngSetSeed’:
 .onLoad failed in loadNamespace() for ‘rngSetSeed’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rngSetSeed/libs/rngSetSeed.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rngSetSeed/libs/rngSetSeed.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rngwell19937’:
 .onLoad failed in loadNamespace() for ‘rngwell19937’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rngwell19937/libs/rngwell19937.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rngwell19937/libs/rngwell19937.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rngWELL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rngWELL/libs/rngWELL.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rngWELL/libs/rngWELL.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RNHANES’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RNifti’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RNiftyReg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rnightlights’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rNMF’:
 .onLoad failed in loadNamespace() for ‘nnls’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nnls/libs/nnls.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nnls/libs/nnls.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rnmr1D’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rnn’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rnoaa’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RNOmni’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rnpn’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Running examples in ‘RNRCS-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: grabNRCS.elements
> ### Title: grabNRCS.elements
> ### Aliases: grabNRCS.elements
> ### Keywords: atmopsheric atmosphere, climate, data, environment,
> ###   environmental in-situ, weather
> 
> ### ** Examples
> 
> grabNRCS.elements(site_id='SCAN:2221')
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: grabNRCS.elements ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rnrfa’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘rnr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: sensitize.data.frame
> ### Title: Compute the sensitivity-adjusted estimates of predicted outcome
> ###   given treatment/control
> ### Aliases: sensitize.data.frame
> 
> ### ** Examples
> 
> obj <- data.frame(treat = 0, resp_ctl = .2, resp_trt = .3, p_trt = .5)
> sensitize(obj, q = .5, dp = log(2), d0 = log(2), d1 = log(2))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: sensitize ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rnumerai’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘roadoi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘roahd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROAuth’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘robcbi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/robeth/libs/robeth.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/robeth/libs/robeth.so: failed to map segment from shared object
Execution halted
'library' or 'require' calls in package code:
  ‘robustbase’ ‘sfsmisc’
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
.BuildPartial: no visible global function definition for ‘as.formula’
.BuildPartial: no visible global function definition for ‘residuals’
.PairwiseCorrelation : .Standardize : <anonymous>: no visible global
  function definition for ‘na.omit’
.PairwiseCorrelation : .Standardize: no visible binding for global
  variable ‘median’
.PairwiseCorrelation: no visible global function definition for
  ‘complete.cases’
.yw: no visible global function definition for ‘toeplitz’
FastQn: no visible global function definition for ‘median’
FastQn: no visible global function definition for ‘mad’
fqn: no visible global function definition for ‘median’
fqn: no visible global function definition for ‘mad’
psdcor: no visible global function definition for ‘posdefify’
psdcor: no visible global function definition for ‘nearcor’
robar: no visible global function definition for ‘frequency’
robcor: no visible global function definition for ‘covMcd’
s_FastQn: no visible global function definition for ‘median’
Undefined global functions or variables:
  as.formula complete.cases covMcd frequency mad median na.omit nearcor
  posdefify residuals toeplitz
Consider adding
  importFrom("stats", "as.formula", "complete.cases", "frequency", "mad",
             "median", "na.omit", "residuals", "toeplitz")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘robeth’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/robeth/libs/robeth.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/robeth/libs/robeth.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘robets’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: distrMod
Loading required package: distr
Loading required package: startupmsg
:startupmsg>  Utilities for Start-Up Messages (version 0.9.5)
:startupmsg> 
:startupmsg>  For more information see ?"startupmsg",
:startupmsg>  NEWS("startupmsg")

Loading required package: sfsmisc
Error: package or namespace load failed for ‘distr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘distr’ could not be loaded
Execution halted
Found the following significant warnings:
  ./hammock.h:369:15: warning: assigning field to itself [-Wself-assign-field]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/robfilter.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘robis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘robmixglm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Robocoap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘using_robotstxt.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: GSE
Loading required package: Rcpp
Error: package or namespace load failed for ‘Rcpp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘Rcpp’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: ROptRegTS
Loading required package: ROptEstOld
Loading required package: distr
Loading required package: startupmsg
:startupmsg>  Utilities for Start-Up Messages (version 0.9.5)
:startupmsg> 
:startupmsg>  For more information see ?"startupmsg",
:startupmsg>  NEWS("startupmsg")

Loading required package: sfsmisc
Error: package or namespace load failed for ‘distr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘distr’ could not be loaded
Execution halted
RobRSVD: no visible global function definition for ‘median’
Undefined global functions or variables:
  median
Consider adding
  importFrom("stats", "median")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘robustarima’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/splusTimeDate/libs/splusTimeDate.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/splusTimeDate/libs/splusTimeDate.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘robustbase’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/robustbase/libs/robustbase.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/robustbase/libs/robustbase.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RobustCalibration’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘robustETM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/robustETM/libs/robustETM.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/robustETM/libs/robustETM.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RobustGaSP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘robustloggamma’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/robustbase/libs/robustbase.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/robustbase/libs/robustbase.so: failed to map segment from shared object
Execution halted
aggregateRanks: no visible binding for global variable ‘median’
aggregateRanks: no visible global function definition for ‘pnorm’
betaScores: no visible global function definition for ‘pbeta’
correctBetaPvaluesExact: no visible binding for global variable ‘qbeta’
thresholdBetaScore: no visible global function definition for ‘pbeta’
Undefined global functions or variables:
  median pbeta pnorm qbeta
Consider adding
  importFrom("stats", "median", "pbeta", "pnorm", "qbeta")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘robustrao’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gmp/libs/gmp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gmp/libs/gmp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: fit.models
Error: package or namespace load failed for ‘fit.models’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘fit.models’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘robustreg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘robustvarComp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/robustbase/libs/robustbase.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/robustbase/libs/robustbase.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘robustX’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/robustbase/libs/robustbase.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/robustbase/libs/robustbase.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rockchalk’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RockFab’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rococo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rocsvm.path’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: splines
Loading required package: date
Error: package or namespace load failed for ‘date’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/date/libs/date.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/date/libs/date.so: failed to map segment from shared object
Error: package ‘date’ could not be loaded
Execution halted
NPROCwoGS: no visible global function definition for ‘quantile’
NPROCwoGS : rdirichlet: no visible global function definition for
  ‘rgamma’
NPROCwoGS: no visible global function definition for ‘rbinom’
NPROCwoGS: no visible global function definition for ‘rbeta’
NPROCwoGS: no visible binding for global variable ‘quantile’
Undefined global functions or variables:
  quantile rbeta rbinom rgamma
Consider adding
  importFrom("stats", "quantile", "rbeta", "rbinom", "rgamma")
to your NAMESPACE file.
prepare_Rd: score.Rd:20-22: Dropping empty section \details
prepare_Rd: score.Rd:23-25: Dropping empty section \source
prepare_Rd: score.Rd:26-28: Dropping empty section \references
Rd file 'NPROCwoGS.Rd':
  \examples lines wider than 100 characters:
     AUC<- sum((ROC.est$T.Se[1,-1]+ROC.est$T.Se[1,-(ncutoff+2)])*(ROC.est$T.Sp[1,-1]-ROC.est$T.Sp[1,-(ncutoff+2)])/2)
     plot(1-ROC.est$T.Sp[1,],ROC.est$T.Se[1,],"l", xlab="1-Specificities",ylab="Sensitivities", main=paste("AUC=", format(AUC, digits=4),

Rd file 'ROCwoGS-package.Rd':
  \examples lines wider than 100 characters:
     AUC<- sum((ROC.est$T.Se[1,-1]+ROC.est$T.Se[1,-(ncutoff+2)])*(ROC.est$T.Sp[1,-1]-ROC.est$T.Sp[1,-(ncutoff+2)])/2)
     plot(1-ROC.est$T.Sp[1,],ROC.est$T.Se[1,],"l", xlab="1-Specificities",ylab="Sensitivities", main=paste("AUC=", format(AUC, digits=4),

These lines will be truncated in the PDF manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RODBCDBI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RODBC/libs/RODBC.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RODBC/libs/RODBC.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RODBC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RODBC/libs/RODBC.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RODBC/libs/RODBC.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rodd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rodeo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/deSolve/libs/deSolve.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/deSolve/libs/deSolve.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Comparison.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘how-to.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Package listed in more than one of Depends, Imports, Suggests, Enhances:
  ‘RODBC’
A package should be listed in only one of these fields.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.models.globalOptTests’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.models.miplib’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.models.netlib’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.alabama’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.clp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.cplex’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.deoptim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.ecos’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.glpk’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.ipop’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.lpsolve’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.msbinlp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.neos’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.nloptr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.optimx’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.qpoases’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.quadprog’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.scs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI.plugin.symphony’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rollmatch’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rollply’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘roll’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rollRegres’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: roloc
Error: package or namespace load failed for ‘roloc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/colorspace/libs/colorspace.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/colorspace/libs/colorspace.so: failed to map segment from shared object
Error: package ‘roloc’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘roloc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/colorspace/libs/colorspace.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/colorspace/libs/colorspace.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROlogit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘rolr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: rhier
> ### Title: Finding Optimal Cutpoints Using a Hierarchical Method
> ### Aliases: rhier
> 
> ### ** Examples
> 
> library(rolr)
> 
> #simulate data with true underlying cutpoints and hazard goes up as covariate goes up
> d=simdata(nn = 150, hr = c(1, 2, 3), hazard.func = "step",
+           props=c(1/3, 1/3, 1/3), censoring.rate = 0)
> 
> #finding optimal cutpoints using alt = 'decrease' option
> res=rhier(times=d$times, status=d$status, x=d$x, ns=15, alt='decrease')
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: rhier ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rolypoly’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: MortalitySmooth
Loading required package: svcm
Loading required package: Matrix
Error: package or namespace load failed for ‘Matrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘Matrix’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RonFHIR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rook’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rook/libs/Rook.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rook/libs/Rook.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rootSolve’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rootSolve/libs/rootSolve.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rootSolve/libs/rootSolve.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘roots’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rootWishart’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ropenaq’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROpenDota’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROpenFIGI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROpenWeatherMap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘nicer_roperators_v1_1_0.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ropercenter’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running ‘tests.R’ [33s/33s]
Running the tests in ‘tests/tests.R’ failed.
Complete output:
  > library(rope)
  > 
  > testres <- function(res) {
  +   if (dim(res$selection)[1] != 2) {
  +     stop('nrow of selection should be equal to number of fdr targets')
  +   }
  +   if (dim(res$selection)[2] != 1128) {
  +     stop('width of selection should be equal to width of input')
  +   }
  +   if (length(res$q) != 1128) {
  +     stop('length of q should be equal to width of input')
  +   }
  +   if (min(res$selection) != 0 || max(res$selection) != 1 ||
  +       sum(res$selection[1, ]) <= 0 || sum(res$selection[1, ]) >= 1128 ||
  +       any(!is.logical(res$selection))) {
  +     stop('selection does not make sense')
  +   }
  +   if (min(res$q) < 0 || max(res$q) > 1 || sum(res$q) <= 0 || sum(res$q) >= 1128) {
  +     stop('q does not make sense')
  +   }
  +   if (any(res$q[1001:1128] > 0.1) || sum(res$q[1:1000] < 0.15) > 10) {
  +     stop('q is too bad')
  +   }
  + }
  > 
  > # test basic use
  > set.seed(1)
  > x <- t(sapply(c(0.01, 0.05, 0.1),
  +   function(p) c(rbinom(1000, 50, p), rbinom(128, 50, 0.99))))
  > res <- rope(x, 50, c(0.1, 0.2), mc.cores=1)
  > testres(res)
  > 
  > # test with sparse input
  > y <- Matrix::Matrix(x, sparse=TRUE)
  Error in dyn.load(file, DLLpath = DLLpath, ...) : 
    unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
  Calls: :: ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: fastdigest
Error: package or namespace load failed for ‘fastdigest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fastdigest/libs/fastdigest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fastdigest/libs/fastdigest.so: failed to map segment from shared object
Error: package ‘fastdigest’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROptimizely’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘roptim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: ROptEstOld
Loading required package: distr
Loading required package: startupmsg
:startupmsg>  Utilities for Start-Up Messages (version 0.9.5)
:startupmsg> 
:startupmsg>  For more information see ?"startupmsg",
:startupmsg>  NEWS("startupmsg")

Loading required package: sfsmisc
Error: package or namespace load failed for ‘distr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘distr’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ROptSpace’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rorcid’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
ROSE.eval: no visible global function definition for ‘methods’
ROSE.eval: no visible binding for global variable ‘model.frame’
ROSE.eval: no visible binding for global variable ‘predict’
adj.formula: no visible global function definition for ‘terms’
adj.formula: no visible global function definition for ‘as.formula’
omnibus.balancing: no visible binding for global variable ‘model.frame’
ou.sampl: no visible global function definition for ‘rbinom’
over.sampl: no visible global function definition for ‘rbinom’
plot.roc.inner: no visible global function definition for ‘plot’
roc.curve: no visible global function definition for ‘lines’
roc.curve: no visible global function definition for ‘abline’
rose.real: no visible binding for global variable ‘sd’
rose.real: no visible global function definition for ‘sd’
rose.real: no visible global function definition for ‘rnorm’
rose.sampl: no visible global function definition for ‘rbinom’
under.sampl: no visible global function definition for ‘rbinom’
Undefined global functions or variables:
  abline as.formula lines methods model.frame plot predict rbinom rnorm
  sd terms
Consider adding
  importFrom("graphics", "abline", "lines", "plot")
  importFrom("stats", "as.formula", "model.frame", "predict", "rbinom",
             "rnorm", "sd", "terms")
  importFrom("utils", "methods")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rospca’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geometry/libs/geometry.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/geometry/libs/geometry.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rosqp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rotationForest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rpart/libs/rpart.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rpart/libs/rpart.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rotl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
.computeValueReduct: no visible global function definition for ‘combn’
.findAllReductsFromCore: no visible global function definition for
  ‘combn’
.findFirstReductsFromCore: no visible global function definition for
  ‘combn’
.findSmallestReductFamilyFromCore: no visible global function
  definition for ‘combn’
Undefined global functions or variables:
  combn
Consider adding
  importFrom("utils", "combn")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘routr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Found the following apparent S3 methods exported but not registered:
  cbind.fill
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
S3 methods shown with full name in documentation object 'cbind.fill':
  ‘cbind.fill’

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘roxygen2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
royston.test: no visible global function definition for ‘shapiro.test’
royston.test: no visible global function definition for ‘cor’
royston.test: no visible global function definition for ‘qnorm’
royston.test: no visible global function definition for ‘pnorm’
royston.test: no visible global function definition for ‘cov’
royston.test: no visible global function definition for ‘mahalanobis’
royston.test: no visible global function definition for ‘qqplot’
royston.test: no visible global function definition for ‘qchisq’
royston.test: no visible global function definition for ‘ppoints’
royston.test: no visible global function definition for ‘abline’
royston.test: no visible global function definition for ‘pchisq’
Undefined global functions or variables:
  abline cor cov mahalanobis pchisq pnorm ppoints qchisq qnorm qqplot
  shapiro.test
Consider adding
  importFrom("graphics", "abline")
  importFrom("stats", "cor", "cov", "mahalanobis", "pchisq", "pnorm",
             "ppoints", "qchisq", "qnorm", "qqplot", "shapiro.test")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rPackedBar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpact’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rpact/libs/rpact.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rpact/libs/rpact.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: picante
Loading required package: ape
Error: package or namespace load failed for ‘ape’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘ape’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: hash
hash-2.2.6 provided by Decision Patterns

Error: package or namespace load failed for ‘rpartitions’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rpartitions/libs/rpartitions.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rpartitions/libs/rpartitions.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpart’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rpart/libs/rpart.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rpart/libs/rpart.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpatrec’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpcdsearch’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Running examples in ‘rpdo-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: pdo
> ### Title: Pacific Decadal Oscillation Index
> ### Aliases: pdo
> ### Keywords: datasets
> 
> ### ** Examples
> 
> library(rpdo)
> library(ggplot2)
Error: package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘RPEXE.RPEXT.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: parallel
Error: package or namespace load failed for ‘rpf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rpf/libs/rpf.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rpf/libs/rpf.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpgm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rpgm/libs/rpgm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rpgm/libs/rpgm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RApiSerialize/libs/RApiSerialize.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RApiSerialize/libs/RApiSerialize.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rphast’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rphast/libs/rphast.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rphast/libs/rphast.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rphylopic’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpicosat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rpicosat/libs/rpicosat.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rpicosat/libs/rpicosat.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpinterest’:
 .onLoad failed in loadNamespace() for ‘rjson’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rjson/libs/rjson.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rjson/libs/rjson.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpivotTable’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rplos’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpms’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running ‘test-all.R’ [0s/0s]
Running the tests in ‘tests/test-all.R’ failed.
Complete output:
  > #' @import testthat
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Rpoet_Introduction.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rpolyhedra’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rpoppler’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rpoppler/libs/Rpoppler.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rpoppler/libs/Rpoppler.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: truncdist
Loading required package: stats4
Loading required package: evd
Error: package or namespace load failed for ‘evd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/evd/libs/evd.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/evd/libs/evd.so: failed to map segment from shared object
Error: package ‘evd’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: DBI
Loading required package: RPostgreSQL
Error: package or namespace load failed for ‘RPostgreSQL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RPostgreSQL/libs/RPostgreSQL.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RPostgreSQL/libs/RPostgreSQL.so: failed to map segment from shared object
Error: package ‘RPostgreSQL’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: DBI
Error: package or namespace load failed for ‘RPostgreSQL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RPostgreSQL/libs/RPostgreSQL.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RPostgreSQL/libs/RPostgreSQL.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RPostgres’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RPPanalyzer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rppo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpql’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Running examples in ‘rPraat-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: it.sample
> ### Title: it.sample
> ### Aliases: it.sample
> 
> ### ** Examples
> 
> it <- it.sample()
> it.plot(it)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Calls: it.plot ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rPref’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RPresto’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rprime’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rprintf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rprofet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rprojroot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/backports/libs/backports.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/backports/libs/backports.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RProtoBuf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpsftm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RPS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpst’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Non-standard file/directory found at top level:
  ‘rpsychi-Ex.R’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RPtests’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘rptR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: rpt
> ### Title: Repeatability Estimation for Gaussian and Non-Gaussian Data
> ### Aliases: rpt
> ### Keywords: models
> 
> ### ** Examples
> 
> # load data
> data(BeetlesBody)
> data(BeetlesMale)
> data(BeetlesFemale)
> 
> #  prepare proportion data
> BeetlesMale$Dark <- BeetlesMale$Colour
> BeetlesMale$Reddish <- (BeetlesMale$Colour-1)*-1
> BeetlesColour <- aggregate(cbind(Dark, Reddish) ~ Treatment + Population + Container, 
+      data=BeetlesMale, FUN=sum)
> 
> # Note: nboot and npermut are set to 0 for speed reasons. Use larger numbers
> # for the real analysis.
> 
> # gaussian data (example with a single random effect)
> rpt(BodyL ~ (1|Population), grname="Population", data=BeetlesBody, 
+      nboot=0, npermut=0, datatype = "Gaussian")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: rpt ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘rptR.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rpubchem’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RPublica’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RPushbullet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘RPyGeo.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Package which this enhances but not available for checking: ‘rjpod’
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rquery
Error: package or namespace load failed for ‘rqdatatable’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘CoupledHarmonics.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: reticulate
Error: package or namespace load failed for ‘reticulate’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘reticulate’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rquake’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rwave/libs/Rwave.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rwave/libs/Rwave.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RQuantLib’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘AssigmentPartitioner.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rr2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rraven’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
rrBlupM6: no visible global function definition for ‘optimize’
Undefined global functions or variables:
  optimize
Consider adding
  importFrom("stats", "optimize")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: ThreeWay
Loading required package: rrcov
Loading required package: robustbase
Error: package or namespace load failed for ‘robustbase’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/robustbase/libs/robustbase.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/robustbase/libs/robustbase.so: failed to map segment from shared object
Error: package ‘robustbase’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rrdrand’:
 .onLoad failed in loadNamespace() for ‘Rrdrand’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rrdrand/libs/Rrdrand.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rrdrand/libs/Rrdrand.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rrd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: registry
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rredis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rredis/libs/rredis.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rredis/libs/rredis.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rredlist’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘rrefine-vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rreg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rres’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RRF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RRF/libs/RRF.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RRF/libs/RRF.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rriskDistributions’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: pcaPP
Error: package or namespace load failed for ‘pcaPP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Error: package ‘pcaPP’ could not be loaded
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘RoadFeatures.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  z.cpp:42:7: warning: explicitly assigning value of variable of type 'arma::mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/rrpack.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rrpack’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RRphylo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Collyer.Adams.2018.MEE.Appendix.S2.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RRreg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rrr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘R.rsp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rrtable’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/devEMF/libs/devEMF.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/devEMF/libs/devEMF.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RRTCS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsae’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rsae/libs/rsae.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rsae/libs/rsae.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSAlgaeR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tidyr
Error: package or namespace load failed for ‘tidyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Error: package ‘tidyr’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rsampletrees’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘RRR.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
stripslash: no visible global function definition for ‘tail’
Undefined global functions or variables:
  tail
Consider adding
  importFrom("utils", "tail")
to your NAMESPACE file.
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘rsatscan.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RGtk2/libs/RGtk2.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RGtk2/libs/RGtk2.so: failed to map segment from shared object
Error: package or namespace load failed for ‘RSCABS’:
 .onLoad failed in loadNamespace() for ‘RGtk2’, details:
  call: install_all()
  error: This platform is not yet supported by the automatic installer. Please install GTK+ manually, if necessary. See: http://www.gtk.org
In addition: Warning message:
Failed to load RGtk2 dynamic library, attempting to install it. 
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rscimark’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSclient’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RSclient/libs/RSclient.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RSclient/libs/RSclient.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rscopus’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rscorecard’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSDA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/leaps/libs/leaps.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/leaps/libs/leaps.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsdepth’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rsdepth/libs/rsdepth.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rsdepth/libs/rsdepth.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsdmx’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: hommel
Error: package or namespace load failed for ‘hommel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘hommel’ could not be loaded
Execution halted
Running examples in ‘rsed-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: as.stream
> ### Title: Converts a character vector to an object of class "stream"
> ### Aliases: as.stream print.stream
> 
> ### ** Examples
> 
> aStream <- c("string1", "string2", "string3")
> aStream
[1] "string1" "string2" "string3"
> 
> # Note how it prints after we convert it to a stream object:
> as.stream(aStream)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Smisc/libs/Smisc.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Smisc/libs/Smisc.so: failed to map segment from shared object
Calls: as.stream ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Running ‘testthat.R’ [0s/0s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # setting R_TESTS to empty string because of
  > # https://github.com/hadley/testthat/issues/144
  > # https://github.com/hadley/testthat/issues/86
  > # revert this when that issue in R is fixed.
  > Sys.setenv("R_TESTS" = "")
  > 
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSEIS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rwave/libs/Rwave.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rwave/libs/Rwave.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSelenium’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Running examples in ‘RSentiment-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: calculate_custom_score
> ### Title: Calculate the score of sentences
> ### Aliases: calculate_custom_score
> 
> ### ** Examples
> 
> calculate_custom_score("This is good",c("good"),c("bad"),1)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: calculate_custom_score ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Non-standard files/directories found at top level:
  ‘clients’ ‘clients.txt’ ‘version’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rserve’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rserve/libs/Rserve.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rserve/libs/Rserve.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rSFA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Depends: includes the non-default packages:
  'biwt', 'cairoDevice', 'fBasics', 'gplots', 'gWidgets',
  'gWidgetsRGtk2', 'minerva', 'parmigene', 'stringr', 'snowfall'
Adding so many packages to the search path is excessive and importing
selectively is preferable.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: biwt
Loading required package: rrcov
Loading required package: robustbase
Error: package or namespace load failed for ‘robustbase’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/robustbase/libs/robustbase.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/robustbase/libs/robustbase.so: failed to map segment from shared object
Error: package ‘robustbase’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSiena’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘RsimMosaic-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: RsimMosaic-package
> ### Title: R Simple IMage Mosaic creation library
> ### Aliases: RsimMosaic-package RsimMosaic
> ### Keywords: package
> 
> ### ** Examples
> 
> # This example will transform an image of the Moon into a mosaic
> # composed by objects from the Messier catalogue. The tiles were
> # created from the images of the 2MASS catalogue.
> # 
> # Set the filename of the original image
> #origImgFileN <- system.file("extdata", "verySmallMoon.jpg", package="RsimMosaic") 
> origImgFileN <- system.file("extdata", "reallyVerySmallMoon.jpg", package="RsimMosaic") 
> 
> # Set the folder where the tiles library is located
> pathToTileLib <- system.file("extdata/2Massier", package="RsimMosaic")
> 
> # Set the filename of the output image (the mosaic!)
> outImgFileN <- file.path(tempdir(), "verySmallMoon-2MASS-Mosaic.jpg")
> 
> # Create the mosaic
> composeMosaicFromImageRandom(origImgFileN, outImgFileN, pathToTileLib, removeTiles=FALSE)

 ------------------------------------------------ 
    R Simple Mosaic composer - random version   
 ------------------------------------------------ 

    Creating the library... 
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jpeg/libs/jpeg.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jpeg/libs/jpeg.so: failed to map segment from shared object
Calls: composeMosaicFromImageRandom ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsimsum’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsinaica’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSiteCatalyst’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Running examples in ‘rslp-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: apply_rules
> ### Title: Apply rules
> ### Aliases: apply_rules
> 
> ### ** Examples
> 
> steprules <- readRDS(system.file("steprules.rds", package = "rslp"))
> rslp:::apply_rules("balões", name = "Plural", steprules)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: <Anonymous> ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘rslurm.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rsmlx’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsMove’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSNPset’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fastmatch/libs/fastmatch.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fastmatch/libs/fastmatch.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsnps’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSocrata’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rsolnp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/truncnorm/libs/truncnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/truncnorm/libs/truncnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: ‘BiocGenerics’

The following objects are masked from ‘package:parallel’:

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from ‘package:stats’:

    IQR, mad, sd, var, xtabs

The following objects are masked from ‘package:base’:

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, basename, cbind, colMeans, colSums, colnames,
    dirname, do.call, duplicated, eval, evalq, get, grep, grepl,
    intersect, is.unsorted, lapply, mapply, match, mget, order, paste,
    pmax, pmax.int, pmin, pmin.int, rank, rbind, rowMeans, rowSums,
    rownames, sapply, setdiff, sort, table, tapply, union, unique,
    unsplit, which, which.max, which.min

Error: package or namespace load failed for ‘rsolr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rspa’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lintools/libs/lintools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lintools/libs/lintools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rSPARCS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/foreign/libs/foreign.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/foreign/libs/foreign.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsparkling’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Rspc.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSpectra’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsppfp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSPS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSQLite’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rSQM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsq’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: svd
Error: package or namespace load failed for ‘svd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/svd/libs/svd.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/svd/libs/svd.so: failed to map segment from shared object
Error: package ‘svd’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSSL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘developer-guidelines.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RStata’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/foreign/libs/foreign.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/foreign/libs/foreign.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rstatscn’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rstiefel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstiefel/libs/rstiefel.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstiefel/libs/rstiefel.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RStoolbox’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rstream’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstream/libs/rstream.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstream/libs/rstream.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RStripe’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘dialogs.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSuite’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsunlight’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rsurrogate’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘RSurveillance-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: adj.risk.sim
> ### Title: Adjusted risk for simulation models
> ### Aliases: adj.risk.sim
> ### Keywords: methods
> 
> ### ** Examples
> 
> # examples for adj.risk.sim
> its<- 10
> risk.cat<- 3
> rr<- matrix(0, nrow=its, ncol=risk.cat)
> rr[,1]<- mc2d::rpert(its, 5,10,20)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Calls: :: ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
The RSurvey GUI is launched only in interactive sessions.
Error: package or namespace load failed for ‘RSurvey’:
 .onAttach failed in attachNamespace() for ‘RSurvey’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsvd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSvgDevice’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RSvgDevice/libs/RSvgDevice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RSvgDevice/libs/RSvgDevice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsvg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rsvg/libs/rsvg.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rsvg/libs/rsvg.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RSVGTipsDevice’:
 .onLoad failed in loadNamespace() for ‘RSVGTipsDevice’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RSVGTipsDevice/libs/RSVGTipsDevice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RSVGTipsDevice/libs/RSVGTipsDevice.so: failed to map segment from shared object
Execution halted
Running examples in ‘RSwissMaps-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: can.plot
> ### Title: Plotting canton-level maps of Switzerland
> ### Aliases: can.plot
> 
> ### ** Examples
> 
>  # Generating sample data:
>  dt <- can.template(2016)
>  for(i in 1:nrow(dt)){dt$values[i] <- sample(c(300:700), 1)/1000}
> 
>  # Plotting sample data:
>  can.plot(dt$bfs_nr, dt$values, 2016)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: can.plot ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rsymphony’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rsymphony/libs/Rsymphony.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rsymphony/libs/Rsymphony.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rJython
Loading required package: rJava
Error: package or namespace load failed for ‘rJava’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Error: package ‘rJava’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rsyslog’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rsyslog/libs/rsyslog.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rsyslog/libs/rsyslog.so: failed to map segment from shared object
Execution halted
barplot.rtconnect: no visible global function definition for ‘rainbow’
barplot.rtconnect: no visible global function definition for ‘text’
plot.rtconnect: no visible global function definition for ‘par’
plot.rtconnect: no visible global function definition for ‘plot’
plot.rtconnect: no visible global function definition for ‘axis.Date’
rtconnect: no visible global function definition for ‘read.table’
Undefined global functions or variables:
  axis.Date par plot rainbow read.table text
Consider adding
  importFrom("grDevices", "rainbow")
  importFrom("graphics", "axis.Date", "par", "plot", "text")
  importFrom("utils", "read.table")
to your NAMESPACE file.
Running ‘test-EPD.R’ [1s/1s]
  Running ‘test-EUstockmarket.R’ [0s/0s]
  Running ‘test-FGM.R’ [2s/2s]
  Running ‘test-MDPD.R’ [0s/0s]
  Running ‘test-RTDE.R’ [1s/1s]
  Running ‘test-dataRTDE.R’ [0s/0s]
  Running ‘test-fitRTDE.R’ [2s/2s]
  Running ‘test-frank.R’ [0s/0s]
  Running ‘test-frechet.R’ [0s/0s]
  Running ‘test-multRTDE.R’ [4s/6s]
  Running ‘test-zvalue.R’ [0s/0s]
Running the tests in ‘tests/test-EUstockmarket.R’ failed.
Complete output:
  > data(EuStockMarkets)
  > 
  > 
  > library(RTDE)
  Loading required package: parallel
  > library(tseries)
  Error: package or namespace load failed for 'tseries' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rtdists’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rtematres’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: KoNLP
Error: package or namespace load failed for ‘KoNLP’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Error: package ‘KoNLP’ could not be loaded
Execution halted
plotGLCM: no visible global function definition for ‘plot’
plotGLCM: no visible global function definition for ‘points’
Undefined global functions or variables:
  plot points
Consider adding
  importFrom("graphics", "plot", "points")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rtfbs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rtfbs/libs/rtfbs.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rtfbs/libs/rtfbs.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...

Error: processing vignette ‘rtf.Rnw’ failed with diagnostics:
 chunk 29 
Error : package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rticles’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘rtide-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: tide_datetimes
> ### Title: Tide Date Times
> ### Aliases: tide_datetimes
> 
> ### ** Examples
> 
> tide_datetimes()
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: tide_datetimes ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: pixmap
Error: package or namespace load failed for ‘rtiff’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rtiff/libs/rtiff.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rtiff/libs/rtiff.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Could not find Java.
Type ?tika for Java installation tips.
Error: package or namespace load failed for ‘rtika’:
 .onAttach failed in attachNamespace() for ‘rtika’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rappdirs/libs/rappdirs.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rappdirs/libs/rappdirs.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rtimes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rtimicropem’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rtk’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RTOMO’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RTransferEntropy’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  getFunctions.cpp:90:16: warning: explicitly assigning value of variable of type 'arma::mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/RTransProb.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RTransProb’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘rtrek-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: st_book_series
> ### Title: Go to Wikipedia entry for a specific book series
> ### Aliases: st_book_series
> 
> ### ** Examples
> 
> st_book_series()
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: st_book_series ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘rr.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RTriangle’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RTriangle/libs/RTriangle.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RTriangle/libs/RTriangle.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rtsne’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘rtsplot-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: rtsplot
> ### Title: 'rtsplot' - Time series plot with base R Graphics.
> ### Aliases: rtsplot rtsplot-package
> 
> ### ** Examples
> 
> # generate time series data
> y = rtsplot.fake.stock.data(1000)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: rtsplot.fake.stock.data ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RtutoR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForest/libs/randomForest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForest/libs/randomForest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rtweet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rtypeform’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rubias’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Ruchardet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: KFAS
Error: package or namespace load failed for ‘KFAS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KFAS/libs/KFAS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KFAS/libs/KFAS.so: failed to map segment from shared object
Error: package ‘KFAS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rucrdtw’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: parallel
Error: package or namespace load failed for ‘rugarch’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/truncnorm/libs/truncnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/truncnorm/libs/truncnorm.so: failed to map segment from shared object
Execution halted
Running examples in ‘ruin-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot_path
> ### Title: Plot a path of the simulated ruin process
> ### Aliases: plot_path
> 
> ### ** Examples
> 
> model <- CramerLundberg(initial_capital = 10,
+                         premium_rate = 1,
+                         claim_poisson_arrival_rate = 1,
+                         claim_size_generator = rexp,
+                         claim_size_parameters = list(rate = 1))
> 
> path <- simulate_path(model = model, max_time_horizon = 10)
> 
> plot_path(path)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: plot_path ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘ruin-intro.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ruler’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rUnemploymentData’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘runittotestthat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Rd file 'Runiversal-package.Rd':
  \examples lines wider than 100 characters:
     #Getting estimates from regression object as Java variables that be directly interpretable by Bean Shell.

These lines will be truncated in the PDF manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘runjags’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘runner’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Runuran’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Runuran/libs/Runuran.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Runuran/libs/Runuran.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rusda’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rusk’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rust’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ruta’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Running examples in ‘R.utils-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: touchFile
> ### Title: Updates the timestamp of a file
> ### Aliases: touchFile.default touchFile
> ### Keywords: programming IO file
> 
> ### ** Examples
> 
> # 1. Create a file
> pathname <- tempfile()
> cat(file=pathname, "Hello world!")
> md5a <- digest::digest(pathname, file=TRUE)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Calls: :: ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ruv’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘RVAideMemoire-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: CDA.test
> ### Title: Significance test for CDA
> ### Aliases: CDA.test
> 
> ### ** Examples
> 
> require(ade4)
Loading required package: ade4
Error: package or namespace load failed for ‘ade4’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
> data(perthi02)
Warning in data(perthi02) : data set ‘perthi02’ not found
> 
> CDA.test(perthi02$tab,perthi02$cla)
Error in is.data.frame(X) : object 'perthi02' not found
Calls: CDA.test -> is.data.frame
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rvalues’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rvalues/libs/rvalues.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rvalues/libs/rvalues.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rvcg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rvcheck’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rversions’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rvertnet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/maps/libs/maps.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/maps/libs/maps.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RVFam’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bdsmatrix/libs/bdsmatrix.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bdsmatrix/libs/bdsmatrix.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rvg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rvgtest’:
 .onLoad failed in loadNamespace() for ‘rvgtest’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rvgtest/libs/rvgtest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rvgtest/libs/rvgtest.so: failed to map segment from shared object
Execution halted
'library' or 'require' call to ‘pixmap’ which was already attached by Depends.
  Please remove these calls from your code.
rvideopoker: warning in rp.radiogroup(mypanel, var =
  state$penny.nickel.quarter.dollar, initval = 1, values = c(1, 5, 25,
  100), title = "Bet (in Cents)", action = setbet): partial argument
  match of ‘var’ to ‘variable’
rvideopoker: warning in rp.slider(mypanel, var = state$no.of.credits,
  from = 1, to = 5, initval = 1, title = "How many Credits?",
  resolution = 1, action = creditset, showvalue = TRUE): partial
  argument match of ‘var’ to ‘variable’
rvideopoker: warning in rp.checkbox(panel = mypanel, var =
  state$keepC1, action = card1check, title = "Keep Card 1?"): partial
  argument match of ‘var’ to ‘variable’
rvideopoker: warning in rp.checkbox(panel = mypanel, var =
  state$keepC2, action = card2check, title = "Keep Card 2?"): partial
  argument match of ‘var’ to ‘variable’
rvideopoker: warning in rp.checkbox(panel = mypanel, var =
  state$keepC3, action = card3check, title = "Keep Card 3?"): partial
  argument match of ‘var’ to ‘variable’
rvideopoker: warning in rp.checkbox(panel = mypanel, var =
  state$keepC4, action = card4check, title = "Keep Card 4?"): partial
  argument match of ‘var’ to ‘variable’
rvideopoker: warning in rp.checkbox(panel = mypanel, var =
  state$keepC5, action = card5check, title = "Keep Card 5?"): partial
  argument match of ‘var’ to ‘variable’
rvideopoker : plotFrame: no visible global function definition for
  ‘par’
rvideopoker : showBack: no visible global function definition for
  ‘title’
rvideopoker : showCardsInitially: no visible global function definition
  for ‘title’
Undefined global functions or variables:
  par title
Consider adding
  importFrom("graphics", "par", "title")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rvinecopulib’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Rvmmin.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rvoterdistance’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RVowpalWabbit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘rwars-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: get_all_planets
> ### Title: Retrieve Data about Every DB Entry in a Class
> ### Aliases: all_entries get_all_films get_all_people get_all_planets
> ###   get_all_species get_all_starships get_all_vehicles
> 
> ### ** Examples
> 
> #Retrieve all planets, parsing
> planets <- get_all_planets(parse_result = TRUE)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Calls: get_all_planets ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘rwars.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘rwavelet-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: DownDyadHi
> ### Title: Hi-Pass Downsampling operator (periodized)
> ### Aliases: DownDyadHi
> 
> ### ** Examples
> 
> qmf <- MakeONFilter('Haar')
> x <- MakeSignal('HeaviSine',2^3)
> DownDyadHi(x, qmf)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: DownDyadHi ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘rwaveletvignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rwave’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rwave/libs/Rwave.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rwave/libs/Rwave.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rWBclimate’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RWDataPlyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
weblogo: no visible global function definition for ‘browseURL’
Undefined global functions or variables:
  browseURL
Consider adding
  importFrom("utils", "browseURL")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: fpc
Error: package or namespace load failed for ‘fpc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘fpc’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RWekajars’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RWeka’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rwfec’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Rwhois’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  qwiener.c:60:12: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
  qwiener.c:69:12: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/RWiener.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RWiener’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RWiener/libs/RWiener.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RWiener/libs/RWiener.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rWind’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Found the following apparent S3 methods exported but not registered:
  lines.rief lines.riif lines.rirf plot.ifile plot.rief plot.riif
  plot.rirf plot.rtef plot.rtif plot.rtrf print.wcmd print.winsteps
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
getcolors: no visible global function definition for ‘rainbow’
lines.rief: no visible global function definition for ‘lines.default’
lines.riif: no visible global function definition for ‘lines.default’
lines.rirf: no visible global function definition for ‘lines.default’
plot.ifile: no visible global function definition for ‘plot’
plot.rief: no visible global function definition for ‘plot.default’
plot.rief: no visible global function definition for ‘lines’
plot.riif: no visible global function definition for ‘plot.default’
plot.riif: no visible global function definition for ‘lines’
plot.rirf: no visible global function definition for ‘plot.default’
plot.rirf: no visible global function definition for ‘lines’
plot.rtef: no visible global function definition for ‘plot.default’
plot.rtif: no visible global function definition for ‘plot.default’
plot.rtrf: no visible global function definition for ‘plot.default’
read.ifile: no visible global function definition for ‘read.table’
read.pfile: no visible global function definition for ‘read.table’
write.wdat: no visible global function definition for ‘write.table’
Undefined global functions or variables:
  lines lines.default plot plot.default rainbow read.table write.table
Consider adding
  importFrom("grDevices", "rainbow")
  importFrom("graphics", "lines", "lines.default", "plot",
             "plot.default")
  importFrom("utils", "read.table", "write.table")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rWishart’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rwt’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rwt/libs/rwt.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rwt/libs/rwt.so: failed to map segment from shared object
Execution halted
Running examples in ‘rwunderground-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: set_location
> ### Title: Specifies location of request
> ### Aliases: set_location
> 
> ### ** Examples
> 
> set_location(zip_code = "90210")
[1] "90210"
> set_location(territory = "Hawaii", city = "Honolulu")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: set_location ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Found the following significant warnings:
  nchg.c:555:13: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/RxCEcolInf.Rcheck/00install.out’ for details.
Non-standard file/directory found at top level:
  ‘dos2unix.sh’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RXKCD’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RJSONIO/libs/RJSONIO.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RJSONIO/libs/RJSONIO.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RxnSim’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RxODE’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/PreciseSums/libs/PreciseSums.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/PreciseSums/libs/PreciseSums.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rxylib’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Ryacas’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RYandexTranslate’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rym’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ryouready’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rYoutheria’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: soiltexture
Error: package or namespace load failed for ‘soiltexture’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘soiltexture’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RZabbix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rzeit2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RZigZag’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘rzmq’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rzmq/libs/rzmq.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rzmq/libs/rzmq.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘RZooRoH’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘s2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sabre’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
calculate.summary: no visible global function definition for ‘sd’
detect.saccades: no visible global function definition for ‘median’
diagnostic.plot: no visible global function definition for ‘dev.new’
diagnostic.plot: no visible global function definition for ‘par’
diagnostic.plot: no visible global function definition for ‘recordPlot’
diagnostic.plot: no visible global function definition for ‘dev.off’
Undefined global functions or variables:
  dev.new dev.off median par recordPlot sd
Consider adding
  importFrom("grDevices", "dev.new", "dev.off", "recordPlot")
  importFrom("graphics", "par")
  importFrom("stats", "median", "sd")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SACCR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Running examples in ‘SACOBRA-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: multiCOBRA
> ### Title: Perform multiple COBRA runs
> ### Aliases: multiCOBRA
> 
> ### ** Examples
> 
> ## solve G11 problem nrun times  and plot the results of all nrun runs
> nrun=4
> feval=30
> 
> ## Defining the constraint problem: G11
> fn <- function(x) {
+   y<-x[1]*x[1]+((x[2]-1)^2)
+   y<-as.numeric(y)
+ 
+   g1 <- as.numeric(+(x[2] - x[1]^2))
+ 
+   return(c(objective=y, g1=g1))
+ }
> funcName="G11"
> d=2
> nConstraints<-1
> lower<-c(-1,-1)
> upper<-c(+1,+1)
> 
> ## Initializing and running cobra
> cobra <- cobraInit(xStart=c(0,0), fn=fn, fName=funcName, lower=lower, upper=upper,
+                    nConstraints=nConstraints,  feval=feval,
+                    initDesPoints=3*d, DOSAC=1,cobraSeed=1)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: cobraInit ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
prepare_Rd: BootsModelTest.Rd:28-29: Dropping empty section \details
prepare_Rd: BootsModelTest.Rd:43: Dropping empty section \note
prepare_Rd: CriticalValues.Rd:38: Dropping empty section \note
prepare_Rd: Pvalues.Rd:24-25: Dropping empty section \details
prepare_Rd: Pvalues.Rd:38: Dropping empty section \note
prepare_Rd: cumsum.test.Rd:16-17: Dropping empty section \details
prepare_Rd: cumsum.test.Rd:28: Dropping empty section \note
Running examples in ‘SADISA-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: SADISA_ML
> ### Title: Performs maximum likelihood parameter estimation for requested
> ###   model
> ### Aliases: SADISA_ML
> ### Keywords: model species-abundance-distribution
> 
> ### ** Examples
> 
> utils::data(datasets);
> utils::data(fitresults);
> result <- SADISA_ML(
+    abund = datasets$dset1.abunvec[[1]],
+    initpars = fitresults$fit1a.parsopt[[1]],
+    labelpars = c(1,1),
+    model = c('pm','dl'),
+    tol = c(1E-1, 1E-1, 1E-1)
+    );
The loglikelihood for the initial parameter values is -317.7003.
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/deSolve/libs/deSolve.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/deSolve/libs/deSolve.so: failed to map segment from shared object
Calls: SADISA_ML ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sadists’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: bbmle
Loading required package: stats4
Error: package or namespace load failed for ‘bbmle’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘bbmle’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: aoos
Error: package or namespace load failed for ‘saeRobust’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
fit.saery.AR1: no visible global function definition for ‘qnorm’
fit.saery.MA1: no visible global function definition for ‘qnorm’
fit.saery.indep: no visible global function definition for ‘qnorm’
mse.saery.boot.AR1.typeI: no visible global function definition for
  ‘rnorm’
mse.saery.boot.AR1.typeI: no visible global function definition for
  ‘write.table’
mse.saery.boot.AR1.typeII: no visible global function definition for
  ‘rnorm’
mse.saery.boot.AR1.typeII: no visible global function definition for
  ‘write.table’
mse.saery.boot.MA1.typeI: no visible global function definition for
  ‘rnorm’
mse.saery.boot.MA1.typeI: no visible global function definition for
  ‘write.table’
mse.saery.boot.MA1.typeII: no visible global function definition for
  ‘rnorm’
mse.saery.boot.MA1.typeII: no visible global function definition for
  ‘write.table’
plot.saery: no visible global function definition for ‘devAskNewPage’
plot.saery: no visible global function definition for ‘par’
plot.saery: no visible global function definition for ‘plot’
plot.saery: no visible global function definition for ‘abline’
plot.saery: no visible global function definition for ‘title’
plot.saery: no visible global function definition for ‘axis’
plot.saery: no visible global function definition for ‘lines’
plot.saery: no visible global function definition for ‘legend’
pvalue: no visible global function definition for ‘pnorm’
Undefined global functions or variables:
  abline axis devAskNewPage legend lines par plot pnorm qnorm rnorm
  title write.table
Consider adding
  importFrom("grDevices", "devAskNewPage")
  importFrom("graphics", "abline", "axis", "legend", "lines", "par",
             "plot", "title")
  importFrom("stats", "pnorm", "qnorm", "rnorm")
  importFrom("utils", "write.table")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘saeSim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  dists.cc:4239:21: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/SafeBayes.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SafeBayes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SafeBayes/libs/SafeBayes.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SafeBayes/libs/SafeBayes.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SafeQuant’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Biobase/libs/Biobase.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Biobase/libs/Biobase.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘safer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Running examples in ‘sAIC-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: sAIC
> ### Title: Compute the Akaike information criterion for the lasso in
> ###   generalized linear models
> ### Aliases: sAIC
> ### Keywords: models regression
> 
> ### ** Examples
> 
> library(MASS)
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘salesforcer’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
Running examples in ‘salty-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: salt_delete
> ### Title: Delete some characters from some values
> ### Aliases: salt_delete
> 
> ### ** Examples
> 
> x <- c("Lorem ipsum dolor sit amet, consectetur adipiscing elit.",
+        "Nunc finibus tortor a elit eleifend interdum.",
+        "Maecenas aliquam augue sit amet ultricies placerat.")
> 
> salt_delete(x, p = 0.5, n = 5)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: salt_delete ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sambia’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FNN/libs/FNN.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FNN/libs/FNN.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SAMCpack’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SAMM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘samon’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/samon/libs/samon.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/samon/libs/samon.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SamplerCompare’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sampler’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘Power-and-sample-size.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘samplesizeCMH-introduction.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Rd file 'mudiff.acc.Rd':
  \usage lines wider than 90 characters:
     mudiff.acc(len, alpha1, beta1, alpha2, beta2, n01, n02, level = 0.95, equal = TRUE, m = 10000, mcs = 3)

Rd file 'mudiff.alc.Rd':
  \usage lines wider than 90 characters:
     mudiff.alc(len, alpha1, beta1, alpha2, beta2, n01, n02, level = 0.95, equal = TRUE, m = 10000, mcs = 3)

Rd file 'mudiff.mblmodwoc.Rd':
  \usage lines wider than 90 characters:
     mudiff.mblmodwoc(len, alpha1, beta1, alpha2, beta2, level = 0.95, worst.level = 0.95, m = 50000, mcs = 3)

Rd file 'mudiff.mblmodwoc.equalvar.Rd':
  \usage lines wider than 90 characters:
     mudiff.mblmodwoc.equalvar(len, alpha, beta, level = 0.95, worst.level = 0.95, m = 50000, mcs = 3)

Rd file 'mudiff.modwoc.Rd':
  \usage lines wider than 90 characters:
     mudiff.modwoc(len, alpha1, beta1, alpha2, beta2, n01, n02, level = 0.95, worst.level = 0.95, equal = TRUE, m = 50000, mcs = 3)

Rd file 'mudiff.modwoc.equalvar.Rd':
  \usage lines wider than 90 characters:
     mudiff.modwoc.equalvar(len, alpha, beta, n01, n02, level = 0.95, worst.level = 0.95, equal = TRUE)

These lines will be truncated in the PDF manual.
propdiff.acc: no visible global function definition for ‘rbeta’
propdiff.acc: no visible global function definition for ‘rbinom’
propdiff.acc: no visible global function definition for ‘pbeta’
propdiff.alc: no visible global function definition for ‘rbeta’
propdiff.alc: no visible global function definition for ‘rbinom’
propdiff.alc: no visible global function definition for ‘qbeta’
propdiff.freq: no visible global function definition for ‘qnorm’
propdiff.mblacc: no visible global function definition for ‘rbeta’
propdiff.mblacc: no visible global function definition for ‘rbinom’
propdiff.mblacc: no visible global function definition for ‘pbeta’
propdiff.mblalc: no visible global function definition for ‘rbeta’
propdiff.mblalc: no visible global function definition for ‘rbinom’
propdiff.mblalc: no visible global function definition for ‘qbeta’
propdiff.mblmodwoc: no visible global function definition for ‘qchisq’
propdiff.mblmodwoc: no visible global function definition for ‘pbeta’
propdiff.mblwoc: no visible global function definition for ‘pbeta’
propdiff.modwoc: no visible global function definition for ‘qchisq’
propdiff.modwoc: no visible global function definition for ‘pbeta’
propdiff.woc: no visible global function definition for ‘pbeta’
Undefined global functions or variables:
  pbeta qbeta qchisq qnorm rbeta rbinom
Consider adding
  importFrom("stats", "pbeta", "qbeta", "qchisq", "qnorm", "rbeta",
             "rbinom")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SamplingBigData’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SamplingBigData/libs/SamplingBigData.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SamplingBigData/libs/SamplingBigData.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: pps
Loading required package: sampling
Error: package or namespace load failed for ‘sampling’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘sampling’ could not be loaded
Execution halted
Running examples in ‘samplingDataCRT-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: sampleData
> ### Title: Sampling Response of individuals within a SWD model
> ### Aliases: sampleData
> 
> ### ** Examples
> 
> K<-6  #measurement (or timepoints)
> I<-10 #Cluster
> J<-2 #number of subjects
> X<-designMatrix(nC=I, nT=K, nSw=2)
> D<-completeDataDesignMatrix(J, X)
> sigma.1<-0.1
> sigma.3<-0.9
> type<-"cross-sec"
> V<-CovMat.Design(K, J, I, sigma.1=sigma.1, sigma.3=sigma.3)
> mu.0<-0
> theta<-1
> betas<-rep(0, K-1)
> parameters<-c(mu.0, betas, theta)
> sample.data<-sampleData(type = type, K=K,J=J,I=I, D=D, V=V, parameters=parameters)
Error in as.vector(x, mode) : 
  cannot coerce type 'closure' to vector of type 'any'
Calls: sampleData -> data.frame -> as.vector
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘my-vignette.Rnw’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: samplingVarEst
Error: package or namespace load failed for ‘samplingVarEst’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/samplingVarEst/libs/samplingVarEst.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/samplingVarEst/libs/samplingVarEst.so: failed to map segment from shared object
Error: package ‘samplingVarEst’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sampling’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘samplingVarEst’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/samplingVarEst/libs/samplingVarEst.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/samplingVarEst/libs/samplingVarEst.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: splines
Error: package or namespace load failed for ‘SAM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SAM/libs/SAM.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SAM/libs/SAM.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘samr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SAMUR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Package suggested but not available for checking: ‘mixer’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sandwich’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SanFranBeachWater’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sanitizers’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sanitizers/libs/sanitizers.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sanitizers/libs/sanitizers.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘santaR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SanzCircos’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sapa’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/splus2R/libs/splus2R.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/splus2R/libs/splus2R.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SAPP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SAPP/libs/SAPP.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SAPP/libs/SAPP.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sars’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
download.sas7bdat.sources : <anonymous>: no visible global function
  definition for ‘download.file’
generate.sas7bdat.source: no visible global function definition for
  ‘download.file’
Undefined global functions or variables:
  download.file
Consider adding
  importFrom("utils", "download.file")
to your NAMESPACE file.
parse.SAScii: no visible binding for global variable ‘end’
parse.SAScii: no visible binding for global variable ‘start’
read.SAScii: no visible global function definition for ‘download.file’
read.SAScii: no visible global function definition for ‘unzip’
read.SAScii: no visible global function definition for ‘read.fwf’
read.SAScii: no visible global function definition for ‘capture.output’
Undefined global functions or variables:
  capture.output download.file end read.fwf start unzip
Consider adding
  importFrom("stats", "end", "start")
  importFrom("utils", "capture.output", "download.file", "read.fwf",
             "unzip")
to your NAMESPACE file.
Rd file 'read.SAScii.Rd':
  \usage lines wider than 90 characters:
     read.SAScii( fn, sas_ri, beginline = 1, buffersize = 50, zipped = F , n = -1 , intervals.to.print = 1000 , lrecl = NULL , skip.decimal. ... [TRUNCATED]
  \examples lines wider than 100 characters:
                     paste( "http://smpbff2.dsd.census.gov/pub/sipp/2004/l04puw" , i , ".zip" , sep = "" )

These lines will be truncated in the PDF manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sasMap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Loading required package: Matrix
Error: package or namespace load failed for ‘Matrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Matrix/libs/Matrix.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Matrix/libs/Matrix.so: failed to map segment from shared object

Error: processing vignette ‘Usinglmer.Rnw’ failed with diagnostics:
 chunk 1 (label = preliminaries) 
Error : package ‘Matrix’ could not be loaded
Execution halted
SASPECT: no visible global function definition for ‘dbinom’
my.SOnePro: missing arguments not allowed in calls to ‘c’
my.ttest: no visible global function definition for ‘var’
Undefined global functions or variables:
  dbinom var
Consider adding
  importFrom("stats", "dbinom", "var")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SASxport’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘satscanMapper’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘saturnin’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SAVE’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘saver-tutorial.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
loads: no visible global function definition for ‘untar’
saves: no visible global function definition for ‘tar’
Undefined global functions or variables:
  tar untar
Consider adding
  importFrom("utils", "tar", "untar")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sazedR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sbart’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
K: no visible global function definition for ‘dnorm’
sBF: no visible global function definition for ‘density’
sBF: no visible global function definition for ‘txtProgressBar’
sBF: no visible global function definition for ‘setTxtProgressBar’
Undefined global functions or variables:
  density dnorm setTxtProgressBar txtProgressBar
Consider adding
  importFrom("stats", "density", "dnorm")
  importFrom("utils", "setTxtProgressBar", "txtProgressBar")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sBIC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sbioPN’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sbioPN/libs/sbioPN.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sbioPN/libs/sbioPN.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘sbl.tutorial.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sbmSDP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sboost’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sbpiper’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Malformed Title field: should not end in a period.
BugReports field is not a suitable URL but appears to contain an email address
  not specified by mailto: nor contained in < >
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sbrl’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SBSA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sbtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Non-standard file/directory found at top level:
  ‘src-java’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scaleboot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scales’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scalpel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scan’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scanstatistics’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scape’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/scar/libs/scar.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/scar/libs/scar.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SCAT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SCAT/libs/SCAT.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SCAT/libs/SCAT.so: failed to map segment from shared object
Execution halted
Running examples in ‘scatr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: scat
> ### Title: Scatterplot
> ### Aliases: scat
> 
> ### ** Examples
> 
> set.seed(1337)
> 
> X <- rnorm(100)
> Y <- 0.5*X + rnorm(100)
> dat <- data.frame(X = X, Y = Y)
> 
> scat(dat, x = 'X', y = 'Y', line = 'linear', se = TRUE, marg = 'dens')
Loading required namespace: jmvcore
Failed with error:  ‘.onLoad failed in loadNamespace() for 'rjson', details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rjson/libs/rjson.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rjson/libs/rjson.so: failed to map segment from shared object’
Error in scat(dat, x = "X", y = "Y", line = "linear", se = TRUE, marg = "dens") : 
  scat requires jmvcore to be installed (restart may be required)
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scatterD3’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘scBio-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: CPM
> ### Title: The Cellular Population Mapping (CPM) algorithm.
> ### Aliases: CPM
> 
> ### ** Examples
> 
> data(SCLabels)
> data(SCFlu)
> data(BulkFlu)
> data(SCCellSpace)
> 
> # Creating relative bulk data (Infleunza infection compared to PBS):
> BulkFluReduced = BulkFlu - rowMeans(BulkFlu[,grep("pbs",colnames(BulkFlu))])
> BulkFluReduced = BulkFluReduced[,grep("flu",colnames(BulkFluReduced))]
> 
> # Running CPM using only a single cell-type:
> oneCellTypeIndexes = which(SCLabels == "MPS")
> res = CPM(SCData = SCFlu[,oneCellTypeIndexes], SCLabels = SCLabels[oneCellTypeIndexes],
+           BulkData = BulkFluReduced, cellSpace = SCCellSpace[oneCellTypeIndexes,], no_cores = 2)
[1] "Selecting cells for each iteration"
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: CPM ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SCBmeanfd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KernSmooth/libs/KernSmooth.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KernSmooth/libs/KernSmooth.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SCCS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘scdensity-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot.scdensity
> ### Title: Plot method for class 'scdensity'.
> ### Aliases: plot.scdensity
> 
> ### ** Examples
> 
> # Basic usage:
> x <- rlnorm(30)
> scKDE <- scdensity(x)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lpSolve/libs/lpSolve.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lpSolve/libs/lpSolve.so: failed to map segment from shared object
Calls: scdensity ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘buildtree.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SCGLR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SchemaOnRead’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jpeg/libs/jpeg.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jpeg/libs/jpeg.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scholar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
prime.factor: no visible global function definition for ‘data’
prime.factor: no visible binding for global variable ‘primlist’
Undefined global functions or variables:
  data primlist
Consider adding
  importFrom("utils", "data")
to your NAMESPACE file.

Found the following calls to data() loading into the global environment:
File ‘schoolmath/R/prime.factor.R’:
  data(primlist)
See section ‘Good practice’ in ‘?data’.
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘schumaker.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scientoText’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Visualizing_Scientific_Replication.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  Warning: ‘__var_1_mmb.offset’ is used uninitialized in this function [-Wuninitialized]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/scio.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scio’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/scio/libs/scio.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/scio/libs/scio.so: failed to map segment from shared object
Execution halted
Running examples in ‘SciViews-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: panels
> ### Title: More panel plots.
> ### Aliases: panels panel_reg panel.reg panel_ellipse panel.ellipse
> ###   panel_cor panel.cor panel_smooth
> ### Keywords: aplot
> 
> ### ** Examples
> 
> # Smooth lines in lower graphs and straight lines in upper graphs
> pairs(trees, lower.panel = panel_smooth, upper.panel = panel_reg)
> # Robust regression lines
> library(MASS)  # For rlm()
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: RImageJROI
Error: package or namespace load failed for ‘RImageJROI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so: failed to map segment from shared object
Error: package ‘RImageJROI’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scmamp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scorecardModelUtils’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scorecard’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
score.GGUM: no visible global function definition for ‘dnorm’
score.GGUM: no visible global function definition for ‘hist’
score.GGUM: no visible global function definition for ‘write.table’
Undefined global functions or variables:
  dnorm hist write.table
Consider adding
  importFrom("graphics", "hist")
  importFrom("stats", "dnorm")
  importFrom("utils", "write.table")
to your NAMESPACE file.
CreatePssm: no visible binding for global variable ‘training’
Undefined global functions or variables:
  training
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scorer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scoringRules’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SCORPIUS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scout’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/scout/libs/scout.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/scout/libs/scout.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scPDSI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
License components which are templates and need '+ file LICENSE':
  MIT License
Running ‘impossible.points-test.R’ [0s/0s]
  Running ‘is.twl06.word-tests.R’ [0s/0s]
  Running ‘sls-tests.R’ [0s/0s]
  Running ‘sws-tests.R’ [0s/0s]
Running the tests in ‘tests/impossible.points-test.R’ failed.
Complete output:
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Running the tests in ‘tests/is.twl06.word-tests.R’ failed.
Complete output:
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Running the tests in ‘tests/sls-tests.R’ failed.
Complete output:
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Running the tests in ‘tests/sws-tests.R’ failed.
Complete output:
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scraEP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ScreenClean’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Found the following calls to attach():
File ‘scriptests/R/source.pkg.R’:
  attach(NULL, pos = pos, name = paste("pkgcode", pkg.name, sep = ":"))
  attach(envir, pos = pos, name = paste("pkgcode", pkg.name, sep = ":"))
See section ‘Good practice’ in ‘?attach’.
Running examples in ‘scriptexec-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: execute
> ### Title: Executes a script and returns the output. The stdout and stderr
> ###   are captured and returned. In case of errors, the exit code will
> ###   return in the status field.
> ### Aliases: execute
> 
> ### ** Examples
> 
> library('scriptexec')
> library('testthat')
Error: package or namespace load failed for ‘testthat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘scriptexec.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scriptName’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scrm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: foreach
Error: package or namespace load failed for ‘scRNAtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scrubr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sctransform’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘scuba’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/scuba/libs/scuba.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/scuba/libs/scuba.so: failed to map segment from shared object
Execution halted
lahiri.design: no visible global function definition for ‘runif’
Undefined global functions or variables:
  runif
Consider adding
  importFrom("stats", "runif")
to your NAMESPACE file.
Error in re-building vignettes:
  ...
Loading required package: grid
Loading required package: Matrix
Loading required package: survival
Error: package or namespace load failed for ‘survival’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/survival/libs/survival.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/survival/libs/survival.so: failed to map segment from shared object

Error: processing vignette ‘SDaA_using_survey.Rnw’ failed with diagnostics:
 chunk 2 (label = loadPkg) 
Error : package ‘survival’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SDALGCP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: entropy
Loading required package: corpcor
Loading required package: fdrtool
Error: package or namespace load failed for ‘fdrtool’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fdrtool/libs/fdrtool.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fdrtool/libs/fdrtool.so: failed to map segment from shared object
Error: package ‘fdrtool’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sdat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sdat/libs/sdat.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sdat/libs/sdat.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sdcMicro’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
estimateTimeToComputeTargetDefinition: no visible global function
  definition for ‘flush.console’
estimateTimeToComputeTargetDefinition: no visible global function
  definition for ‘combn’
initialize,sdcTargetDefinitionClass: no visible global function
  definition for ‘flush.console’
initialize,sdcTargetDefinitionClass: no visible global function
  definition for ‘combn’
initialize,sdcTargetDefinitionClass: no visible global function
  definition for ‘quantile’
initialize,sdcTargetMatrixClass: no visible global function definition
  for ‘flush.console’
Undefined global functions or variables:
  combn flush.console quantile
Consider adding
  importFrom("stats", "quantile")
  importFrom("utils", "combn", "flush.console")
to your NAMESPACE file.
prepare_Rd: sdd.Rd:46-47: Dropping empty section \seealso
prepare_Rd: sddpack-package.Rd:31-32: Dropping empty section \seealso
prepare_Rd: sddsolve.Rd:29-30: Dropping empty section \references
prepare_Rd: sddsolve.Rd:38-39: Dropping empty section \seealso
prepare_Rd: sddsolve.Rd:40-41: Dropping empty section \examples
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SDD’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘SDEFSR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plotRules
> ### Title: Plot a rule set generated by a SDEFSR algorithm
> ### Aliases: plotRules
> 
> ### ** Examples
> 
> plotRules(habermanRules)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: plotRules ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘SDEFSRpackage.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Running examples in ‘SDMPlay-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: SDMtab
> ### Title: Compile species distribution dataset for modelling
> ### Aliases: SDMtab
> 
> ### ** Examples
> 
> #Open occurrence data
> data('ctenocidaris.nutrix')
> occ <- ctenocidaris.nutrix
> 
> #Open environmental descriptors RasterStack
> r <- raster:: stack(system.file('extdata', 'pred.grd',package='SDMPlay'))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sp/libs/sp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sp/libs/sp.so: failed to map segment from shared object
Calls: :: ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Found the following significant warnings:
  pointinpolygon.c:60:7: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
  slope.aspect.c:128:9: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
  slope.aspect.c:128:33: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
  vincenty.geodesics.c:50:9: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
  vincenty.geodesics.c:126:13: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/SDMTools.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SDMTools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SDMTools/libs/SDMTools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SDMTools/libs/SDMTools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sdmvspecies’:
 .onLoad failed in loadNamespace() for ‘mnormt’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sdnet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sdnet/libs/sdnet.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sdnet/libs/sdnet.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sdPrior’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sdprisk’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/PolynomF/libs/PolynomF.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/PolynomF/libs/PolynomF.so: failed to map segment from shared object
Execution halted
Running examples in ‘SDT-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: internalization
> ### Title: Motivation Internalization or Externalization Shares
> ### Aliases: internalization
> ### Keywords: attribute classes models regression
> 
> ### ** Examples
> 
> ## attach dataset to search path (to use variable names)
> attach(learning_motivation)
> 
> ## internal share and external share of identified regulation
> (idr <- internalization(identified, intrinsic, external))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Calls: internalization ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Found the following significant warnings:
  Warning: ‘__var_1_mma.offset’ is used uninitialized in this function [-Wuninitialized]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/sdwd.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘seaaroundus’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: oce
Loading required package: testthat
Error: package or namespace load failed for ‘testthat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Error: package ‘testthat’ could not be loaded
Execution halted
Running examples in ‘sealr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: design
> ### Title: Print an R object test result
> ### Aliases: design design_length design_range design_dim design_unique
> ###   design_missings design_levels design_nlevels design_nrow design_ncol
> ###   design_names design_dimnames design_varclass design_class
> 
> ### ** Examples
> 
> design_length(letters)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: design_length ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘sealr1.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘searchable’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘searchConsoleR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SearchTrees’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SearchTrees/libs/SearchTrees.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SearchTrees/libs/SearchTrees.so: failed to map segment from shared object
Execution halted
adx: no visible global function definition for ‘abline’
adx: no visible global function definition for ‘legend’
dx: no visible global function definition for ‘abline’
dx: no visible global function definition for ‘legend’
maxd: no visible global function definition for ‘abline’
maxd: no visible global function definition for ‘legend’
pc: no visible global function definition for ‘rainbow’
pc: no visible global function definition for ‘plot’
pc: no visible global function definition for ‘abline’
pc: no visible global function definition for ‘legend’
pc: no visible global function definition for ‘points’
pcu: no visible global function definition for ‘rainbow’
pcu: no visible global function definition for ‘plot’
pcu: no visible global function definition for ‘abline’
pcu: no visible global function definition for ‘legend’
pcu: no visible global function definition for ‘points’
rmsd: no visible global function definition for ‘abline’
rmsd: no visible global function definition for ‘legend’
rsd: no visible global function definition for ‘abline’
rsd: no visible global function definition for ‘legend’
Undefined global functions or variables:
  abline legend plot points rainbow
Consider adding
  importFrom("grDevices", "rainbow")
  importFrom("graphics", "abline", "legend", "plot", "points")
to your NAMESPACE file.
sh: 1: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/x13binary/bin/x13ashtml: Permission denied
Warning in system(paste(x13.bin, file.path(tdir, "Testairline")), intern = TRUE) :
  running command ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/x13binary/bin/x13ashtml /tmp/RtmpLsbRsJ/Testairline’ had status 126

A namespace must be able to be loaded with just the base namespace
loaded: otherwise if the namespace gets loaded by a saved object, the
session will be unable to start.

Probably some imports need to be declared in the NAMESPACE file.
sh: 1: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/x13binary/bin/x13ashtml: Permission denied
See section ‘Generic functions and methods’ in the ‘Writing R
Extensions’ manual.
sh: 1: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/x13binary/bin/x13ashtml: Permission denied
The argument of a replacement function which corresponds to the right
hand side must be named ‘value’.
sh: 1: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/x13binary/bin/x13ashtml: Permission denied
See chapter ‘System and foreign language interfaces’ in the ‘Writing R
Extensions’ manual.
sh: 1: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/x13binary/bin/x13ashtml: Permission denied
sh: 1: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/x13binary/bin/x13ashtml: Permission denied
sh: 1: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/x13binary/bin/x13ashtml: Permission denied
All user-level objects in a package should have documentation entries.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
sh: 1: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/x13binary/bin/x13ashtml: Permission denied
sh: 1: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/x13binary/bin/x13ashtml: Permission denied
sh: 1: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/x13binary/bin/x13ashtml: Permission denied
sh: 1: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/x13binary/bin/x13ashtml: Permission denied
The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: seasonal
sh: 1: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/x13binary/bin/x13ashtml: Permission denied
The binaries provided by 'x13binary' do not work on this
machine. To get more information, run:
  x13binary::checkX13binary()

You can set 'X13_PATH' manually if you intend to use your own
binaries. See ?seasonal for details.

Error: package or namespace load failed for ‘seasonalview’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
In addition: Warning message:
In system(paste(x13.bin, file.path(tdir, "Testairline")), intern = TRUE) :
  running command ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/x13binary/bin/x13ashtml /tmp/RtmpGrSXlr/Testairline’ had status 126
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: JM
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SecKW’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fdrtool/libs/fdrtool.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fdrtool/libs/fdrtool.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: SPSL
Error: package or namespace load failed for ‘SPSL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SPSL/libs/SPSL.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SPSL/libs/SPSL.so: failed to map segment from shared object
Error: package ‘SPSL’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘secret’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘secr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘secure’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘securitytxt’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘seeclickfixr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: list_places
> ### Title: Query sub-city neighborhoods in which issues can be reported.
> ### Aliases: list_places
> 
> ### ** Examples
> 
> list_places("Boston, MA",limit = 5)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Calls: list_places ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘seedCCA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
.read.SeerStatTXT: no visible global function definition for
  ‘read.table’
.write.SeerStatTXT: no visible global function definition for
  ‘write.table’
Undefined global functions or variables:
  read.table write.table
Consider adding
  importFrom("utils", "read.table", "write.table")
to your NAMESPACE file.
prepare_Rd: SEER2RTestdata.Rd:77-78: Dropping empty section \source
Rd file 'SEER2R-package.Rd':
  \examples lines wider than 100 characters:
     #load testing data: there are three data objects, i.e. SEER2RTestData1,SEER2RTestData2,SEER2RTestData3 
     dicinfoused = write.SeerStat(SEER2RTestData2, DICfileName = "testrun1.dic",UseVarLabelsInTxtFile=FALSE);

Rd file 'read.SeerStat.Rd':
  \usage lines wider than 90 characters:
     read.SeerStat(DICfileName, TXTfileName = NULL, UseVarLabelsInData = FALSE,ReadHeaderOnly=FALSE,...)
  \examples lines wider than 100 characters:
     #load testing data: there are three data objects, i.e. SEER2RTestData1,SEER2RTestData2,SEER2RTestData3 
     dicinfoused = write.SeerStat(SEER2RTestData2, DICfileName = "testrun1.dic",UseVarLabelsInTxtFile=FALSE);

Rd file 'write.SeerStat.Rd':
  \usage lines wider than 90 characters:
     write.SeerStat(myData, DICfileName, TXTfileName = NULL, UseVarLabelsInTxtFile = TRUE, LabVarsNames = NULL,...)
  \examples lines wider than 100 characters:
     #load testing data: there are three data objects, i.e. SEER2RTestData1,SEER2RTestData2,SEER2RTestData3 
     dicinfoused = write.SeerStat(SEER2RTestData2, DICfileName = "testrun1.dic",UseVarLabelsInTxtFile=FALSE);

These lines will be truncated in the PDF manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SeerMapper2010East’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SeerMapper2010Regs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SeerMapper2010West’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SeerMapperEast’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SeerMapper’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SeerMapperRegs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SeerMapperWest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘seewave’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘segclust2d’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: jointseg
Error: package or namespace load failed for ‘jointseg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/matrixStats/libs/matrixStats.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/matrixStats/libs/matrixStats.so: failed to map segment from shared object
Error: package ‘jointseg’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘segmag’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  BinNegative.cpp:108:5: warning: assigning field to itself [-Wself-assign-field]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/Segmentor3IsBack.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Segmentor3IsBack’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Segmentor3IsBack/libs/Segmentor3IsBack.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Segmentor3IsBack/libs/Segmentor3IsBack.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘segregation’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
get.infectiousness: no visible global function definition for ‘qchisq’
Undefined global functions or variables:
  qchisq
Consider adding
  importFrom("stats", "qchisq")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘seismicRoll’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sejmRP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RPostgreSQL/libs/RPostgreSQL.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RPostgreSQL/libs/RPostgreSQL.so: failed to map segment from shared object
Execution halted
Running examples in ‘Select-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plotProbs
> ### Title: Plots results from the selectSpecies function
> ### Aliases: plotProbs
> 
> ### ** Examples
> 
> ### 1 trait constraint with maximum functional diversity and entropy
> Spp <- 5 #S = number of species
> trait <- as.matrix(data.frame(trait=c(1:Spp)))
> rownames(trait) <- c(letters[1:nrow(trait)])
> result1 <- selectSpecies(t2c=trait, constraints=c(3.5), t2d=trait, obj="QH", capd=FALSE)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: selectSpecies ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘selectSpecies.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘selectr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SeleMix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: pwr
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SELF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: splines
Loading required package: quadprog
Error: package or namespace load failed for ‘quadprog’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Error: package ‘quadprog’ could not be loaded
Execution halted
Warning: namespace ‘shiny.semantic’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘shiny.semantic’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
See section ‘Generic functions and methods’ in the ‘Writing R
Extensions’ manual.
Warning: namespace ‘shiny.semantic’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
See chapter ‘System and foreign language interfaces’ in the ‘Writing R
Extensions’ manual.
Warning: namespace ‘shiny.semantic’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘shiny.semantic’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Warning: namespace ‘shiny.semantic’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
Running examples in ‘semantic.dashboard-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: box
> ### Title: Create a box.
> ### Aliases: box
> 
> ### ** Examples
> 
> box(title = "Sample box", color = "blue", width = 11,
+     "This is a box content"
+ )
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Calls: box ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Semblance’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘semds’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/minpack.lm/libs/minpack.lm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/minpack.lm/libs/minpack.lm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘semiArtificial’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SEMID’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: numDeriv
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘SEMinR.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SemiPar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘semPlot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘semPower.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sem’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘introduction-to-package-SEMrushR-.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘semver’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sendmailR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rtiff
Loading required package: pixmap
Error: package or namespace load failed for ‘rtiff’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rtiff/libs/rtiff.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rtiff/libs/rtiff.so: failed to map segment from shared object
Error: package ‘rtiff’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sensitivity2x2xk’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BiasedUrn/libs/BiasedUrn.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BiasedUrn/libs/BiasedUrn.so: failed to map segment from shared object
Execution halted
gconv: no visible global function definition for ‘convolve’
sens.analysis.aberrant.rank: no visible global function definition for
  ‘pnorm’
sens.analysis.mh: no visible global function definition for ‘pnorm’
Undefined global functions or variables:
  convolve pnorm
Consider adding
  importFrom("stats", "convolve", "pnorm")
to your NAMESPACE file.
mscorev: no visible global function definition for ‘quantile’
senmwCI : funcCI: no visible global function definition for ‘qnorm’
senmwCI : funcCI2: no visible global function definition for ‘qnorm’
separable1k: no visible global function definition for ‘pnorm’
Undefined global functions or variables:
  pnorm qnorm quantile
Consider adding
  importFrom("stats", "pnorm", "qnorm", "quantile")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sensitivityPStrat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sensitivity’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sensitivity/libs/sensitivity.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sensitivity/libs/sensitivity.so: failed to map segment from shared object
Execution halted
Running examples in ‘sensmediation-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: coefs.sensmed
> ### Title: ML estimation of regression parameters for calculation of direct
> ###   and indirect effects under unobserved confounding
> ### Aliases: coefs.sensmed
> 
> ### ** Examples
> 
> 
> require(mvtnorm)
Loading required package: mvtnorm
Error: package or namespace load failed for ‘mvtnorm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
> 
> n <- 1000
> set.seed(102677)
> x <- rnorm(n)
> z.star <- -0.5 + 0.1*x + rnorm(n)
> z <- ifelse(z.star > 0, 1, 0)
> 
> #Generating correlated error terms for the mediator and outcome models:
> R <- 0.5
> Sigma <- cbind(c(1,R), c(R,1))
> epsilon <- rmvnorm(n, sigma = Sigma)
Error in rmvnorm(n, sigma = Sigma) : could not find function "rmvnorm"
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SensMixed’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sensR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘senstrat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BiasedUrn/libs/BiasedUrn.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BiasedUrn/libs/BiasedUrn.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SensusR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/openssl/libs/openssl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/openssl/libs/openssl.so: failed to map segment from shared object
Execution halted
Running examples in ‘SentimentAnalysis-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: countWords
> ### Title: Count words
> ### Aliases: countWords countWords.Corpus countWords.character
> ###   countWords.data.frame countWords.TermDocumentMatrix
> ###   countWords.DocumentTermMatrix
> 
> ### ** Examples
> 
> documents <- c("This is a test", "an one more")
> 
> # count words (without stopwords)
> countWords(documents)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: countWords ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘SentimentAnalysis.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sentimentr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
separationplot: no visible global function definition for ‘dev.new’
separationplot: no visible global function definition for ‘pdf’
separationplot: no visible global function definition for ‘par’
separationplot: no visible global function definition for ‘plot’
separationplot: no visible global function definition for ‘title’
separationplot: no visible global function definition for ‘segments’
separationplot: no visible global function definition for ‘rect’
separationplot: no visible global function definition for ‘points’
separationplot: no visible global function definition for ‘lines’
separationplot: no visible global function definition for
  ‘colorRampPalette’
separationplot: no visible global function definition for ‘layout’
separationplot: no visible global function definition for ‘plot.new’
separationplot: no visible global function definition for ‘legend’
separationplot: no visible global function definition for ‘dev.off’
separationplot: no visible global function definition for ‘locator’
sp.categorical: no visible global function definition for ‘dev.new’
sp.categorical: no visible global function definition for ‘pdf’
sp.categorical: no visible global function definition for ‘par’
sp.categorical: no visible global function definition for ‘layout’
sp.categorical: no visible global function definition for ‘plot’
sp.categorical: no visible global function definition for ‘text’
sp.categorical: no visible global function definition for ‘dev.off’
Undefined global functions or variables:
  colorRampPalette dev.new dev.off layout legend lines locator par pdf
  plot plot.new points rect segments text title
Consider adding
  importFrom("grDevices", "colorRampPalette", "dev.new", "dev.off",
             "pdf")
  importFrom("graphics", "layout", "legend", "lines", "locator", "par",
             "plot", "plot.new", "points", "rect", "segments", "text",
             "title")
to your NAMESPACE file.
Rd file 'sp.categorical.Rd':
  \examples lines wider than 100 characters:
       read.dta("http://www2.lse.ac.uk/dataFiles/geographyAndEnvironment/Replication/Article%20for%20JCR%20(Human%20Rights).dta")

These lines will be truncated in the PDF manual.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: wrapr
Error: package or namespace load failed for ‘seplyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: clue
Error: package or namespace load failed for ‘clue’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so: failed to map segment from shared object
Error: package ‘clue’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tcltk
Loading required package: tcltk2
Loading required package: Biostrings
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: ‘BiocGenerics’

The following objects are masked from ‘package:parallel’:

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from ‘package:stats’:

    IQR, mad, sd, var, xtabs

The following objects are masked from ‘package:base’:

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, basename, cbind, colMeans, colSums, colnames,
    dirname, do.call, duplicated, eval, evalq, get, grep, grepl,
    intersect, is.unsorted, lapply, mapply, match, mget, order, paste,
    pmax, pmax.int, pmin, pmin.int, rank, rbind, rowMeans, rowSums,
    rownames, sapply, setdiff, sort, table, tapply, union, unique,
    unsplit, which, which.max, which.min

Loading required package: S4Vectors
Loading required package: stats4
Error: package or namespace load failed for ‘S4Vectors’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/S4Vectors/libs/S4Vectors.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/S4Vectors/libs/S4Vectors.so: failed to map segment from shared object
Error: package ‘S4Vectors’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SeqGrapheR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/S4Vectors/libs/S4Vectors.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/S4Vectors/libs/S4Vectors.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘seqHMM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Running examples in ‘seqICP-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: seqICPnl
> ### Title: Non-linear Invariant Causal Prediction
> ### Aliases: seqICPnl
> 
> ### ** Examples
> 
> set.seed(2)
> 
> # environment 1
> na <- 120
> X1a <- 0.3*rnorm(na)
> X3a <- X1a + 0.2*rnorm(na)
> Ya <- 2*X1a^2 + 0.6*sin(X3a) + 0.1*rnorm(na)
> X2a <- -0.5*Ya + 0.5*X3a + 0.1*rnorm(na)
> 
> # environment 2
> nb <- 80
> X1b <- 2*rnorm(nb)
> X3b <- rnorm(nb)
> Yb <- 2*X1b^2 + 0.6*sin(X3b) + 0.1*rnorm(nb)
> X2b <- -0.5*Yb + 0.8*rnorm(nb)
> 
> # combine environments
> X1 <- c(X1a,X1b)
> X2 <- c(X2a,X2b)
> X3 <- c(X3a,X3b)
> Y <- c(Ya,Yb)
> Xmatrix <- cbind(X1, X2, X3)
> 
> # use GAM as regression function
> GAM <- function(X,Y){
+   d <- ncol(X)
+   if(d>1){
+     formula <- "Y~1"
+     names <- c("Y")
+     for(i in 1:(d-1)){
+       formula <- paste(formula,"+s(X",toString(i),")",sep="")
+       names <- c(names,paste("X",toString(i),sep=""))
+     }
+     data <- data.frame(cbind(Y,X[,-1,drop=FALSE]))
+       colnames(data) <- names
+     fit <- fitted.values(mgcv::gam(as.formula(formula),data=data))
+   } else{
+     fit <- rep(mean(Y),nrow(X))
+   }
+   return(fit)
+ }
> 
> # Y follows the same structural assignment in both environments
> # a and b (cf. the lines Ya <- ... and Yb <- ...).
> # The direct causes of Y are X1 and X3.
> # A GAM model fit considers X1, X2 and X3 as significant.
> # All these variables are helpful for the prediction of Y.
> summary(mgcv::gam(Y~s(X1)+s(X2)+s(X3)))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: summary ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘seqinr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: foreach
Loading required package: doParallel
Loading required package: iterators
Loading required package: parallel
Error: package or namespace load failed for ‘SeqKat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Found the following significant warnings:
  vcf.c:253:15: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/seqminer.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘seqminer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/seqminer/libs/seqminer.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/seqminer/libs/seqminer.so: failed to map segment from shared object
Execution halted
plotenz : addmark: no visible global function definition for ‘par’
plotenz : addmark: no visible global function definition for ‘plot’
plotenz : addmark: no visible global function definition for ‘text’
plotenz : addmark: no visible global function definition for ‘segments’
plotenz : addband: no visible global function definition for ‘segments’
plotenz : addband: no visible global function definition for ‘text’
plotenz: no visible global function definition for ‘layout’
plotenz: no visible global function definition for ‘text’
plotenz: no visible global function definition for ‘dev.new’
Undefined global functions or variables:
  dev.new layout par plot segments text
Consider adding
  importFrom("grDevices", "dev.new")
  importFrom("graphics", "layout", "par", "plot", "segments", "text")
to your NAMESPACE file.
Rd file 'plotenz.Rd':
  \usage lines wider than 90 characters:
     plotenz(sequences, enznames, enzdata, side = TRUE, type = c("RFLP", "TRFLP"), Terminal = c("T5", "T3"))

These lines will be truncated in the PDF manual.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: copynumber
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: ‘BiocGenerics’

The following objects are masked from ‘package:parallel’:

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from ‘package:stats’:

    IQR, mad, sd, var, xtabs

The following objects are masked from ‘package:base’:

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, basename, cbind, colMeans, colSums, colnames,
    dirname, do.call, duplicated, eval, evalq, get, grep, grepl,
    intersect, is.unsorted, lapply, mapply, match, mget, order, paste,
    pmax, pmax.int, pmin, pmin.int, rank, rbind, rowMeans, rowSums,
    rownames, sapply, setdiff, sort, table, tapply, union, unique,
    unsplit, which, which.max, which.min

Error: package or namespace load failed for ‘copynumber’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/S4Vectors/libs/S4Vectors.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/S4Vectors/libs/S4Vectors.so: failed to map segment from shared object
Error: package ‘copynumber’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sequoia’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sequoia/libs/sequoia.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sequoia/libs/sequoia.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘seriation’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/TSP/libs/TSP.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/TSP/libs/TSP.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘cover.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘servr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sesem’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
capture: no visible binding for global variable ‘resultText’
restore.session: no visible binding for global variable
  ‘.save.session.packages’
restore.session: no visible binding for global variable
  ‘.save.session.search’
save.session: no visible global function definition for ‘dev.list’
save.session: no visible binding for '<<-' assignment to
  ‘.save.session.search’
save.session: no visible binding for '<<-' assignment to
  ‘.save.session.packages’
Undefined global functions or variables:
  .save.session.packages .save.session.search dev.list resultText
Consider adding
  importFrom("grDevices", "dev.list")
to your NAMESPACE file.

Found the following calls to attach():
File ‘session/R/session.R’:
  attach(sub("file:", "", i))
See section ‘Good practice’ in ‘?attach’.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: QCA
Error: package or namespace load failed for ‘QCA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Error: package ‘QCA’ could not be loaded
Execution halted
setpath: no visible global function definition for ‘cov’
setpath: no visible global function definition for ‘median’
setpath: no visible global function definition for ‘pchisq’
Undefined global functions or variables:
  cov median pchisq
Consider adding
  importFrom("stats", "cov", "median", "pchisq")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SetRank’:
 .onLoad failed in loadNamespace() for ‘XML’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/XML/libs/XML.so: failed to map segment from shared object
Execution halted
random.number.test: no visible global function definition for ‘runif’
random.number.test: no visible global function definition for ‘rnorm’
setRNG: no visible global function definition for ‘runif’
Undefined global functions or variables:
  rnorm runif
Consider adding
  importFrom("stats", "rnorm", "runif")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sets’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sets/libs/sets.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sets/libs/sets.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘settings.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Package suggested but not available for checking: ‘loomR’
'library' or 'require' call to ‘graphics’ which was already attached by Depends.
  Please remove these calls from your code.
severity: no visible global function definition for ‘qnorm’
severity: no visible global function definition for ‘pnorm’
Undefined global functions or variables:
  pnorm qnorm
Consider adding
  importFrom("stats", "pnorm", "qnorm")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sfadv’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
L_exp: no visible global function definition for ‘pnorm’
L_hNV: no visible global function definition for ‘pnorm’
L_trunc: no visible global function definition for ‘pnorm’
L_trunc_mufest: no visible global function definition for ‘pnorm’
dgp: no visible global function definition for ‘runif’
dgp: no visible global function definition for ‘rnorm’
eff.sfa: no visible global function definition for ‘predict’
fitted.sfa: no visible global function definition for ‘predict’
predict.sfa: no visible global function definition for ‘coef’
print.sfa: no visible global function definition for ‘coef’
residuals.sfa: no visible global function definition for ‘fitted’
sfa: no visible global function definition for ‘model.frame’
sfa: no visible global function definition for ‘model.response’
sfa.fit: no visible global function definition for ‘lm’
sfa.fit: no visible global function definition for ‘resid’
sfa.fit: no visible global function definition for ‘var’
sfa.fit: no visible global function definition for ‘optim’
summary.sfa: no visible global function definition for ‘logLik’
summary.sfa: no visible global function definition for ‘pchisq’
te.eff.sfa: no visible global function definition for ‘residuals’
te.eff.sfa: no visible global function definition for ‘pnorm’
u.sfa: no visible global function definition for ‘residuals’
u.sfa: no visible global function definition for ‘dnorm’
u.sfa: no visible global function definition for ‘pnorm’
Undefined global functions or variables:
  coef dnorm fitted lm logLik model.frame model.response optim pchisq
  pnorm predict resid residuals rnorm runif var
Consider adding
  importFrom("stats", "coef", "dnorm", "fitted", "lm", "logLik",
             "model.frame", "model.response", "optim", "pchisq", "pnorm",
             "predict", "resid", "residuals", "rnorm", "runif", "var")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sfdct’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘sfinx-vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘sfsmisc-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: diagDA
> ### Title: Diagonal Discriminant Analysis
> ### Aliases: diagDA dDA print.dDA predict.dDA
> ### Keywords: naive Bayes classifier models classif
> 
> ### ** Examples
> 
> ## two artificial examples by Andreas Greutert:
> d1 <- data.frame(x = c(1, 5, 5, 5, 10, 25, 25, 25, 25, 29),
+                  y = c(4, 1, 2, 4,  4,  4,     6:8,     7))
> n.plot(d1)
> library(cluster)
Error: package or namespace load failed for ‘cluster’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SFS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SFtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bit/libs/bit.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bit/libs/bit.so: failed to map segment from shared object
Execution halted
Running examples in ‘sgee-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: bisee
> ### Title: Bi-Level Stagewise Estimating Equations Implementation
> ### Aliases: bisee bisee bisee.formula bisee.default bisee.fit gsee
> 
> ### ** Examples
> 
> 
> 
> #####################
> ## Generate test data
> #####################
> 
> ## Initialize covariate values
> p <- 50 
> beta <- c(rep(2,5),
+           c(1, 0, 1.5, 0, .5),
+           rep(0.5,5),
+           rep(0,p-15))
> groupSize <- 5
> numGroups <- length(beta)/groupSize
> 
> 
> generatedData <- genData(numClusters = 50,
+                          clusterSize = 4,
+                          clusterRho = 0.6,
+                          clusterCorstr = "exchangeable",
+                          yVariance = 1,
+                          xVariance = 1,
+                          numGroups = numGroups,
+                          groupSize = groupSize,
+                          groupRho = 0.3,
+                          beta = beta,
+                          family = gaussian(),
+                          intercept = 1)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Calls: genData ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sgeostat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sgeostat/libs/sgeostat.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sgeostat/libs/sgeostat.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sglg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/robustbase/libs/robustbase.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/robustbase/libs/robustbase.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tensorflow
Error: package or namespace load failed for ‘tensorflow’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘tensorflow’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sgmodel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sGMRFmix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: poibin
Error: package or namespace load failed for ‘poibin’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/poibin/libs/poibin.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/poibin/libs/poibin.so: failed to map segment from shared object
Error: package ‘poibin’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SGPdata’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SGP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
UQnormalize.count: no visible binding for global variable ‘quantile’
plotNScores: no visible global function definition for ‘par’
plotNScores: no visible global function definition for ‘hist’
plotNScores: no visible global function definition for ‘title’
plotScores: no visible global function definition for ‘par’
plotScores: no visible global function definition for ‘hist’
plotScores: no visible global function definition for ‘title’
sgRSEA: no visible binding for global variable ‘sd’
sgRSEA: no visible global function definition for ‘p.adjust’
sgRSEA.mean: no visible binding for global variable ‘sd’
sgRSEA.mean: no visible global function definition for ‘p.adjust’
Undefined global functions or variables:
  hist p.adjust par quantile sd title
Consider adding
  importFrom("graphics", "hist", "par", "title")
  importFrom("stats", "p.adjust", "quantile", "sd")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shadowtext’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shapeR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shapes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/minpack.lm/libs/minpack.lm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/minpack.lm/libs/minpack.lm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: ghyp
Loading required package: numDeriv
Loading required package: gplots
Error: package or namespace load failed for ‘gplots’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Error: package ‘gplots’ could not be loaded
Execution halted
Running examples in ‘SharpeR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: predint
> ### Title: prediction interval for Sharpe ratio
> ### Aliases: predint
> 
> ### ** Examples
> 
> 
> # should reject null
> etc <- predint(rnorm(1000,mean=0.5,sd=0.1),oosdf=127,ope=1)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: predint ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Running ‘testthat.R’ [0s/0s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # Copyright 2013 Steven E. Pav. All Rights Reserved.
  > # Author: Steven E. Pav
  > 
  > # This file is part of SharpeR.
  > #
  > # SharpeR is free software: you can redistribute it and/or modify
  > # it under the terms of the GNU Lesser General Public License as published by
  > # the Free Software Foundation, either version 3 of the License, or
  > # (at your option) any later version.
  > #
  > # SharpeR is distributed in the hope that it will be useful,
  > # but WITHOUT ANY WARRANTY; without even the implied warranty of
  > # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  > # GNU Lesser General Public License for more details.
  > #
  > # You should have received a copy of the GNU Lesser General Public License
  > # along with SharpeR.  If not, see <http://www.gnu.org/licenses/>.
  > 
  > # env var:
  > # nb: 
  > # see also:
  > # todo:
  > # changelog: 
  > #
  > # Created: 2013.03.14
  > # Copyright: Steven E. Pav, 2012-2013
  > # Author: Steven E. Pav
  > # Comments: Steven E. Pav
  > # SVN: $Id: blankheader.txt 25454 2012-02-14 23:35:25Z steven $
  > 
  > # because Hadley says it should be like this.
  > # see https://github.com/hadley/devtools/wiki/Testing
  > 
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘AsymptoticMarkowitz.Rnw’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sharpr2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sharpshootR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: stats4
Loading required package: Formula
Loading required package: dcmle
Loading required package: dclone
Loading required package: coda
Error: package or namespace load failed for ‘coda’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘coda’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SHELF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shiftR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/shiftR/libs/shiftR.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/shiftR/libs/shiftR.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinyAce’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘shinyaframe-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: aDataScene
> ### Title: A-Frame Scene with R data
> ### Aliases: aDataScene
> 
> ### ** Examples
> 
> library(dplyr)
Error: package or namespace load failed for ‘dplyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘scatterplot3d.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘shinyalert.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinyanimate’:
 .onLoad failed in loadNamespace() for ‘shinyanimate’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinybootstrap2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinyBS’:
 .onAttach failed in attachNamespace() for ‘shinyBS’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinycssloaders’:
 .onLoad failed in loadNamespace() for ‘shinycssloaders’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinycustomloader’:
 .onLoad failed in loadNamespace() for ‘shinycustomloader’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinydashboardPlus’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinydashboard’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinyDND’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘css_effects.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinyFeedback’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinyFiles’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: heatmaply
Loading required package: plotly
Loading required package: ggplot2
Error: package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘ggplot2’ could not be loaded
Execution halted
Running examples in ‘shinyhelper-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: helper
> ### Title: Augment a shiny.tag with a question mark helper button
> ### Aliases: helper
> 
> ### ** Examples
> 
> helper(shiny::actionButton("go", "click me!"),
+        icon = "exclamation",
+        colour = "red",
+        type = "markdown",
+        content = "ClickHelp")  # looks for 'helpfiles/ClickHelp.md'
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Calls: helper ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shiny.i18n’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ShinyItemAnalysis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinyjqui’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘shinyjs-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: disabled
> ### Title: Initialize a Shiny input as disabled
> ### Aliases: disabled
> 
> ### ** Examples
> 
> if (interactive()) {
+   library(shiny)
+   shinyApp(
+     ui = fluidPage(
+       useShinyjs(),  # Set up shinyjs
+       actionButton("btn", "Click me"),
+       disabled(
+         textInput("element", NULL, "I was born disabled")
+       )
+     ),
+     server = function(input, output) {
+       observeEvent(input$btn, {
+         enable("element")
+       })
+     }
+   )
+ }
> 
> library(shiny)
Error: package or namespace load failed for ‘shiny’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘shinyjs-example.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: pracma
Loading required package: pspline
Error: package or namespace load failed for ‘pspline’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/pspline/libs/pspline.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/pspline/libs/pspline.so: failed to map segment from shared object
Error: package ‘pspline’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinyLP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘shinymaterial-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: material_button
> ### Title: Create a shinymaterial button
> ### Aliases: material_button
> 
> ### ** Examples
> 
> material_button(
+   input_id = "example_button",
+   label = "Button",
+   icon = "cloud",
+   depth = 5,
+   color = "blue lighten-2"
+ )
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Calls: material_button ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shiny’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinyRGL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shiny.router’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shiny.semantic’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ShinyTester’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinytest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinythemes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinyTime’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinytoastr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinyTree’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/jsonlite/libs/jsonlite.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shinyWidgets’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
shrink.estim: no visible global function definition for ‘cov’
shrink.estim: no visible global function definition for ‘cor’
shrink.estim: no visible global function definition for ‘cov2cor’
targetCor: no visible global function definition for ‘cor.test’
targetCor: no visible global function definition for ‘cor’
targetCor: no visible global function definition for ‘sd’
targetCor: no visible global function definition for ‘cov’
targetD: no visible binding for global variable ‘var’
targetF: no visible global function definition for ‘cov’
targetF: no visible global function definition for ‘cor’
targetG: no visible global function definition for ‘cor’
targetG: no visible global function definition for ‘sd’
targetG: no visible global function definition for ‘cov’
targetGpos: no visible global function definition for ‘cor’
targetGpos: no visible global function definition for ‘sd’
targetGpos: no visible global function definition for ‘cov’
targetGstar: no visible global function definition for ‘cor’
targetGstar: no visible global function definition for ‘sd’
targetGstar: no visible global function definition for ‘cov’
Undefined global functions or variables:
  cor cor.test cov cov2cor sd var
Consider adding
  importFrom("stats", "cor", "cor.test", "cov", "cov2cor", "sd", "var")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shock’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/glasso/libs/glasso.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/glasso/libs/glasso.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ShortForm’:
 .onLoad failed in loadNamespace() for ‘mnormt’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shotGroups’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘showimage’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/png/libs/png.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/png/libs/png.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘showtextdb’:
 .onLoad failed in loadNamespace() for ‘sysfonts’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sysfonts/libs/sysfonts.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sysfonts/libs/sysfonts.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: sysfonts
Error: package or namespace load failed for ‘sysfonts’:
 .onLoad failed in loadNamespace() for ‘sysfonts’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sysfonts/libs/sysfonts.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sysfonts/libs/sysfonts.so: failed to map segment from shared object
Error: package ‘sysfonts’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘shrink’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Depends: includes the non-default packages:
  'hdrcde', 'coda', 'MASS', 'bayesm', 'mnormt', 'spatstat'
Adding so many packages to the search path is excessive and importing
selectively is preferable.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: hdrcde
Error: package or namespace load failed for ‘hdrcde’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hdrcde/libs/hdrcde.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/hdrcde/libs/hdrcde.so: failed to map segment from shared object
Error: package ‘hdrcde’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SIBERG’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mclust/libs/mclust.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mclust/libs/mclust.so: failed to map segment from shared object
Execution halted
Running examples in ‘SIBER-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: fitEllipse
> ### Title: Fit a multivariate normal distribution to x and y data using
> ###   jags
> ### Aliases: fitEllipse
> 
> ### ** Examples
> 
> x <- stats::rnorm(50)
> y <- stats::rnorm(50)
> parms <- list()
> parms$n.iter <- 2 * 10^3
> parms$n.burnin <- 500
> parms$n.thin <- 2     
> parms$n.chains <- 2    
> priors <- list()
> priors$R <- 1 * diag(2)
> priors$k <- 2
> priors$tau.mu <- 1.0E-3
> fitEllipse(x, y, parms, priors)
Error: .onLoad failed in loadNamespace() for 'rjags', details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rjags/libs/rjags.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rjags/libs/rjags.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘Centroid-Vectors.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Running examples in ‘sicegar-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: categorize
> ### Title: Categorize input data by comparing the AIC values of the three
> ###   fitted models.
> ### Aliases: categorize
> 
> ### ** Examples
> 
> # Example 1 with double sigmoidal data
> time=seq(3, 24, 0.1)
> 
> #simulate intensity data and add noise
> noise_parameter <- 0.2
> intensity_noise <- runif(n = length(time), min = 0, max = 1) * noise_parameter
> intensity <- sicegar::doublesigmoidalFitFormula(time,
+                                                finalAsymptoteIntensityRatio = .3,
+                                                maximum = 4,
+                                                slope1Param = 1,
+                                                midPoint1Param = 7,
+                                                slope2Param = 1,
+                                                midPointDistanceParam = 8)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatial/libs/spatial.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatial/libs/spatial.so: failed to map segment from shared object
Calls: <Anonymous> ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘additional_parameters.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SIDES’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nnet/libs/nnet.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nnet/libs/nnet.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sidier’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘Introduction_to_sidrar.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SID’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/graph/libs/BioC_graph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/graph/libs/BioC_graph.so: failed to map segment from shared object
Execution halted
Running examples in ‘SiER-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: cv.SiER
> ### Title: Cross-validation for high-dimensional multivariate regression
> ### Aliases: cv.SiER
> 
> ### ** Examples
> 
> # q=1
> library(MASS)
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SIfEK’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
.cluster: no visible global function definition for ‘kmeans’
.plot.sigclust: no visible global function definition for ‘par’
.plot.sigclust: no visible global function definition for ‘density’
.plot.sigclust: no visible global function definition for ‘runif’
.plot.sigclust: no visible global function definition for ‘dnorm’
.plot.sigclust: no visible global function definition for ‘lines’
.plot.sigclust: no visible global function definition for ‘points’
.plot.sigclust: no visible global function definition for ‘title’
.plot.sigclust: no visible global function definition for ‘text’
.plot.sigclust: no visible global function definition for ‘qnorm’
.plot.sigclust: no visible global function definition for ‘abline’
.plot.sigclust: no visible global function definition for ‘quantile’
.plot.sigclust: no visible global function definition for ‘legend’
.simnull: no visible global function definition for ‘rnorm’
.vareigen: no visible global function definition for ‘mad’
.vareigen: no visible global function definition for ‘cov’
sigclust: no visible global function definition for ‘sd’
sigclust: no visible global function definition for ‘pnorm’
Undefined global functions or variables:
  abline cov density dnorm kmeans legend lines mad par pnorm points
  qnorm quantile rnorm runif sd text title
Consider adding
  importFrom("graphics", "abline", "legend", "lines", "par", "points",
             "text", "title")
  importFrom("stats", "cov", "density", "dnorm", "kmeans", "mad",
             "pnorm", "qnorm", "quantile", "rnorm", "runif", "sd")
to your NAMESPACE file.
Sight.Est: no visible global function definition for ‘glm’
Sight.Est: no visible global function definition for ‘binomial’
Sight.Est: no visible global function definition for ‘coef’
Sight.Est: no visible global function definition for ‘terms’
Sight.Est: no visible binding for global variable ‘binomial’
covtheta: no visible global function definition for ‘cov’
print.sightest: no visible global function definition for ‘qnorm’
summary.sightest: no visible global function definition for ‘qnorm’
vardiff: no visible global function definition for ‘vcov’
vardiff: no visible global function definition for ‘coef’
vardiff: no visible global function definition for ‘terms’
varlog.lam: no visible global function definition for ‘vcov’
varlog.lam: no visible global function definition for ‘coef’
varlog.lam: no visible global function definition for ‘terms’
Undefined global functions or variables:
  binomial coef cov glm qnorm terms vcov
Consider adding
  importFrom("stats", "binomial", "coef", "cov", "glm", "qnorm", "terms",
             "vcov")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sigmajs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sigmaNet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘sigmoid.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘signalHsmm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘signal’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
signmedian.test: no visible global function definition for ‘median’
signmedian.test: no visible global function definition for ‘binom.test’
signmedian.test: no visible global function definition for ‘pbinom’
signmedian.test: no visible global function definition for ‘pnorm’
Undefined global functions or variables:
  binom.test median pbinom pnorm
Consider adding
  importFrom("stats", "binom.test", "median", "pbinom", "pnorm")
to your NAMESPACE file.
Running examples in ‘sigora-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: makeGPS
> ### Title: Create your own Signature Object.
> ### Aliases: makeGPS
> ### Keywords: functions
> 
> ### ** Examples
> 
> data(nciTable)
> ## what the input looks like:
> head(nciTable)
          pathwayId                                           pathwayName
1 pi3kplctrkpathway Trk receptor signaling mediated by PI3K and PLC-gamma
2 pi3kplctrkpathway Trk receptor signaling mediated by PI3K and PLC-gamma
3 pi3kplctrkpathway Trk receptor signaling mediated by PI3K and PLC-gamma
4 pi3kplctrkpathway Trk receptor signaling mediated by PI3K and PLC-gamma
5 pi3kplctrkpathway Trk receptor signaling mediated by PI3K and PLC-gamma
6 pi3kplctrkpathway Trk receptor signaling mediated by PI3K and PLC-gamma
             gene
1 ENSG00000140992
2 ENSG00000196689
3 ENSG00000142208
4 ENSG00000145675
5 ENSG00000138741
6 ENSG00000152495
> ## create a SigObject. use the saveFile parameter for reuse.  
> nciH<-makeGPS(pathwayTable=nciTable)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Calls: makeGPS ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sigQC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mclust/libs/mclust.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mclust/libs/mclust.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘lmExample.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
'library' or 'require' calls in package code:
  ‘gdata’ ‘splines’
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
plot.SII: no visible global function definition for ‘plot’
plot.SII: no visible global function definition for ‘lines’
plot.SII: no visible global function definition for ‘abline’
plot.SII: no visible global function definition for ‘legend’
sii : approx.l: no visible global function definition for ‘approx’
sii.excel: no visible global function definition for ‘predict’
sii.excel : approx.l: no visible global function definition for
  ‘approx’
Undefined global functions or variables:
  abline approx legend lines plot predict
Consider adding
  importFrom("graphics", "abline", "legend", "lines", "plot")
  importFrom("stats", "approx", "predict")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: hapsim
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: boot
Loading required package: mvtnorm
Error: package or namespace load failed for ‘mvtnorm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Error: package ‘mvtnorm’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SimComp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Running examples in ‘SimCop-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: SplineFitDepFct
> ### Title: Fit a dependence function by spline smoothing
> ### Aliases: SplineFitDepFct
> ### Keywords: smooth
> 
> ### ** Examples
> 
> ## Data from Hall and Tajvidi (2004, ANZJS)
> EstDF2 <- NonparEstDepFct(MaxTemp, convex = FALSE)
> 
> ## Plot modified Pickands Function and area in which
> ## dependence function must lie
> plot(EstDF2, ylim = c(0.5,1), xlab = "w", ylab = "A(w)", type="l", lty="longdash")
> polygon(c(0, 0.5, 1, 0), c(1, 0.5, 1, 1))
> 
> ## Fit spline to Pickands function and add to plot
> splfit <- SplineFitDepFct(EstDF2)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Calls: SplineFitDepFct ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SimCorMultRes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/evd/libs/evd.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/evd/libs/evd.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: SimMultiCorrData
Error: package or namespace load failed for ‘SimMultiCorrData’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Error: package ‘SimMultiCorrData’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘simctest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/simctest/libs/simctest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/simctest/libs/simctest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SimDesign’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Sim.DiffProc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rstream
Error: package or namespace load failed for ‘rstream’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstream/libs/rstream.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstream/libs/rstream.so: failed to map segment from shared object
Error: package ‘rstream’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SimEUCartelLaw’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘simexaft’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘simglm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SimHaz’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: stringi
Error: package or namespace load failed for ‘stringi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Error: package ‘stringi’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘similr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SimInf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘simIReff-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: eff
> ### Title: Effectiveness Distributions
> ### Aliases: eff deff peff qeff reff
> 
> ### ** Examples
> 
> # sample distribution from AP scores
> e <- effCont_beta(web2010ap[,1])
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: effCont_beta ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘simLife’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: simmer
Error: package or namespace load failed for ‘simmer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘simmer’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘simmer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SimMultiCorrData’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘simode’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/deSolve/libs/deSolve.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/deSolve/libs/deSolve.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘simPATHy.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘SimPhe.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘simPH’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
'library' or 'require' call to ‘boot’ which was already attached by Depends.
  Please remove these calls from your code.
Package in Depends field not imported from: ‘boot’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Found the following apparent S3 methods exported but not registered:
  pairs.boot
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
File ‘simpleboot/R/zzz.R’:
  .onLoad calls:
    require(boot)

Package startup functions should not change the search path.
See section ‘Good practice’ in '?.onAttach'.

lo.boot.resample: warning in sample(1:nrow(orig.data), rep = TRUE, prob
  = weights): partial argument match of ‘rep’ to ‘replace’
lo.boot.resample: warning in sample(res, rep = TRUE, prob = weights):
  partial argument match of ‘rep’ to ‘replace’
S3 methods shown with full name in documentation object 'pairs.boot':
  ‘pairs.boot’

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘clusterCaches.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
randInitializeWeights: no visible global function definition for
  ‘runif’
Undefined global functions or variables:
  runif
Consider adding
  importFrom("stats", "runif")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘simpleRCache’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
File
  LICENSE
is not mentioned in the DESCRIPTION file.
Non-standard file/directory found at top level:
  ‘HISTORY’
Loading this package had a fatal error status code 1
Loading log:
Loading required package: Formula
Loading required package: plotrix
Error: package or namespace load failed for ‘simplexreg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/simplexreg/libs/simplexreg.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/simplexreg/libs/simplexreg.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SimplifyStats’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘simputation’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SimReg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/graph/libs/BioC_graph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/graph/libs/BioC_graph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SimRVPedigree’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘simsalapar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/colorspace/libs/colorspace.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/colorspace/libs/colorspace.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SimSeq’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fdrtool/libs/fdrtool.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fdrtool/libs/fdrtool.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘simstandard’:
 .onLoad failed in loadNamespace() for ‘mnormt’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so: failed to map segment from shared object
Execution halted
Found the following hidden files and directories:
  vignettes/.Rhistory
These were most likely included in error. See section ‘Package
structure’ in the ‘Writing R Extensions’ manual.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: abind
Loading required package: svUnit
Error: package or namespace load failed for ‘simSummary’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘simsurv_technical.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Running examples in ‘simtimer-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: as.datetime
> ### Title: Back-transformation from a sim_datetime to a datetime
> ### Aliases: as.datetime
> 
> ### ** Examples
> 
> origin_date <- lubridate::ymd_hms("2016-01-01 00:00:00")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: :: ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘simtimer.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SimTimeVar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘simTool’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rcdk
Loading required package: rcdklibs
Loading required package: rJava
Error: package or namespace load failed for ‘rJava’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Error: package ‘rJava’ could not be loaded
Execution halted
Running examples in ‘simukde-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: find_best_fit
> ### Title: Find Best Fitting Distribution
> ### Aliases: find_best_fit
> 
> ### ** Examples
> 
> petal.length <- datasets::iris$Petal.Length[datasets::iris$Species == "setosa"]
> simukde::find_best_fit(x = petal.length, positive = TRUE)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: <Anonymous> ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Running ‘testthat.R’ [0s/0s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # Got this Sys.setenv line from https://github.com/luckyrandom/cmaker/blob/b85813ac2b7aef69932eca8fbb4fa0ec225e0af0/tests/testthat.R
  > # so that devtools:check() won't hang.
  > # setting R_TESTS to empty string because of
  > # https://github.com/hadley/testthat/issues/144
  > # revert this when that issue in R is fixed.
  > Sys.setenv("R_TESTS" = "")
  > 
  > library(testthat)
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: pracma
Loading required package: arrangements
Error: package or namespace load failed for ‘arrangements’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gmp/libs/gmp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gmp/libs/gmp.so: failed to map segment from shared object
Error: package ‘arrangements’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sinew’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SingleCaseES’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SinIW’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fdrtool/libs/fdrtool.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/fdrtool/libs/fdrtool.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sirad’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘SIRE-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: causal.decompose
> ### Title: Estimation and decomposition of simultaneous equation model
> ### Aliases: causal.decompose
> 
> ### ** Examples
> 
> data("macroIT")
> eq.system = list(
+                eq1 = C ~  CP  + I + CP_1,
+                eq2 = I ~ K + CP_1,
+                eq3 = WP ~ I + GDP + GDP_1,
+                eq4 = GDP ~ C + I + GDP_1,
+                eq5 = CP ~ WP + T,
+                eq6 = K ~ I + K_1)
> 
> instruments = ~ T + CP_1 + GDP_1 + K_1
> 
> causal.decompose(data = macroIT,
+                eq.system = eq.system,
+                resid.est = "noDfCor",
+                instruments = instruments,
+                p.adj = TRUE,
+                alpha = 0.05)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Calls: causal.decompose ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SIRItoGTFS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘siRSM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sirt’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sisal’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: foreach
Loading required package: doParallel
Loading required package: iterators
Loading required package: parallel
Error: package or namespace load failed for ‘SISIR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SIS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sisus’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sitmo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: sitree
Loading required package: data.table
Error: package or namespace load failed for ‘data.table’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Error: package ‘data.table’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sivipm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SixSigma’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SizeEstimation’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sizeMat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Running examples in ‘SiZer-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: Arkansas
> ### Title: Time Series of Macroinvertabrates Abundance in the Arkansas
> ###   River.
> ### Aliases: Arkansas
> ### Keywords: datasets
> 
> ### ** Examples
> 
> require(ggplot2)
Loading required package: ggplot2
Error: package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
> 
> data(Arkansas)
> ggplot(Arkansas, aes(x=year, y=sqrt.mayflies)) + 
+    geom_point()
Error in ggplot(Arkansas, aes(x = year, y = sqrt.mayflies)) : 
  could not find function "ggplot"
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sjlabelled’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sjmisc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sjPlot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sjstats’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SKAT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SKAT/libs/SKAT.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SKAT/libs/SKAT.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: parallel
Error: package or namespace load failed for ‘skda’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/skda/libs/skda.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/skda/libs/skda.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘skellam.rnw’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SkewHyperbolic’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/DistributionUtils/libs/DistributionUtils.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/DistributionUtils/libs/DistributionUtils.so: failed to map segment from shared object
Execution halted
dskt: no visible global function definition for ‘dt’
pskt: no visible global function definition for ‘pt’
qskt: no visible global function definition for ‘qt’
rskt: no visible global function definition for ‘runif’
Undefined global functions or variables:
  dt pt qt runif
Consider adding
  importFrom("stats", "dt", "pt", "qt", "runif")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Skillings.Mack’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘skimr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sklarsomega’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Package which this enhances but not available for checking: ‘kmndirs’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘skmeans’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SK’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/leaps/libs/leaps.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/leaps/libs/leaps.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘skynet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: astrolibR
Error: package or namespace load failed for ‘skyscapeR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: httr
Loading required package: htmlTable
Error: package or namespace load failed for ‘htmlTable’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/checkmate/libs/checkmate.so: failed to map segment from shared object
Error: package ‘htmlTable’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘slackr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘slam’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/slam/libs/slam.so: failed to map segment from shared object
Execution halted
slcestimates: no visible global function definition for ‘par’
slcestimates: no visible global function definition for ‘plot’
slcestimates: no visible global function definition for ‘abline’
slcestimates: no visible global function definition for ‘lines’
slcestimates: no visible global function definition for ‘axis’
slcestimates: no visible global function definition for ‘points’
slcestimates: no visible global function definition for ‘title’
Undefined global functions or variables:
  abline axis lines par plot points title
Consider adding
  importFrom("graphics", "abline", "axis", "lines", "par", "plot",
             "points", "title")
to your NAMESPACE file.
Error in re-building vignettes:
  ...
Error: processing vignette ‘chapter01-HortonMosaic.Rnw’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘slfm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SLHD’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SLHD/libs/SLHD.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SLHD/libs/SLHD.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SLICER’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘slickR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘user_doc.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘slimrec’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sloop’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SLOPE’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘slouch-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: artiodactyla
> ### Title: Artiodactyla Phylogeny
> ### Aliases: artiodactyla
> ### Keywords: datasets
> 
> ### ** Examples
> 
> data(artiodactyla)
> library(ape)
Error: package or namespace load failed for ‘ape’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘slowraker-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: rbind_rakelist
> ### Title: rbind a rakelist
> ### Aliases: rbind_rakelist
> 
> ### ** Examples
> 
> rakelist <- slowrake(txt = dog_pubs$abstract[1:2])

  |                                                                            
  |                                                                      |   0%Error: .onLoad failed in loadNamespace() for 'rJava', details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘faqs.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘slp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘smaa’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/smaa/libs/smaa.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/smaa/libs/smaa.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: plotrix
Error: package or namespace load failed for ‘smacof’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘smacpod’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘smac’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/smac/libs/smac.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/smac/libs/smac.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: SSBtools
Loading required package: Matrix
Error: package or namespace load failed for ‘Matrix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘Matrix’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘smam’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Package required but not available: ‘adaptiveGPCA’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SmartEDA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘smart’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: R6
Loading required package: rjags
Loading required package: coda
Error: package or namespace load failed for ‘coda’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘coda’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SmartSifter’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Running examples in ‘smcfcs-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: smcfcs
> ### Title: Substantive model compatible fully conditional specification
> ###   imputation of covariates.
> ### Aliases: smcfcs
> 
> ### ** Examples
> 
> #set random number seed to make results reproducible
> set.seed(123)
> 
> #linear substantive model with quadratic covariate effect
> imps <- smcfcs(ex_linquad, smtype="lm", smformula="y~z+x+xsq",
+                method=c("","","norm","x^2",""))
[1] "Outcome variable(s): y"
[1] "Passive variables: xsq"
[1] "Partially obs. variables: x"
[1] "Fully obs. substantive model variables: z"
[1] "Imputation  1"
[1] "Imputing:  x  using  z  plus outcome"
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: smcfcs ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘smcfcs-vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
File ‘smco/R/smco.R’:
  .onAttach calls:
    cat(paste("This is smco package", version, "\n"))

Package startup functions should use ‘packageStartupMessage’ to
  generate messages.
See section ‘Good practice’ in '?.onAttach'.

smco: no visible global function definition for ‘runif’
smco: no visible global function definition for ‘rnorm’
smco: no visible global function definition for ‘qnorm’
smco: no visible global function definition for ‘pnorm’
smco: no visible global function definition for ‘optim’
Undefined global functions or variables:
  optim pnorm qnorm rnorm runif
Consider adding
  importFrom("stats", "optim", "pnorm", "qnorm", "rnorm", "runif")
to your NAMESPACE file.
Found the following significant warnings:
  MCP_efficient.c:114:16: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
  MCP_efficient.c:134:16: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
  MCP_efficient.c:154:16: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/SMCP.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SMCP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SMCP/libs/SMCP.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SMCP/libs/SMCP.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SMC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SMC/libs/SMC.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SMC/libs/SMC.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘smcUtils’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/smcUtils/libs/smcUtils.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/smcUtils/libs/smcUtils.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: splines
Loading required package: lattice
Error: package or namespace load failed for ‘lattice’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘lattice’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘smerc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/maps/libs/maps.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/maps/libs/maps.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘readme.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: abind
Loading required package: parallel
Error: package or namespace load failed for ‘smfsb’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/smfsb/libs/smfsb.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/smfsb/libs/smfsb.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘smicd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Smisc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Smisc/libs/Smisc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Smisc/libs/Smisc.so: failed to map segment from shared object
Execution halted
lines.SmithWilsonYieldCurve: no visible global function definition for
  ‘lines’
plot.SmithWilsonYieldCurve: no visible global function definition for
  ‘plot’
points.SmithWilsonYieldCurve: no visible global function definition for
  ‘points’
Undefined global functions or variables:
  lines plot points
Consider adding
  importFrom("graphics", "lines", "plot", "points")
to your NAMESPACE file.
Running ‘testall.R’ [0s/0s]
Running the tests in ‘tests/testall.R’ failed.
Complete output:
  > library( "testthat" )
  Error: package or namespace load failed for 'testthat' in dyn.load(file, DLLpath = DLLpath, ...):
   unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
    /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
  Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SMMA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SMNCensReg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: SSN
Loading required package: RSQLite
Error: package or namespace load failed for ‘RSQLite’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘RSQLite’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘smoothAPC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SparseM/libs/SparseM.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SparseM/libs/SparseM.so: failed to map segment from shared object
Execution halted
Fourier2d: no visible global function definition for ‘fft’
kernel2dsmooth: no visible global function definition for ‘fft’
Undefined global functions or variables:
  fft
Consider adding
  importFrom("stats", "fft")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: greybox
Error: package or namespace load failed for ‘greybox’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘greybox’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘smoothROCtime’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KernSmooth/libs/KernSmooth.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KernSmooth/libs/KernSmooth.so: failed to map segment from shared object
Execution halted
Running examples in ‘smoothr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: densify
> ### Title: Densify spatial lines or polygons
> ### Aliases: densify
> 
> ### ** Examples
> 
> library(sf)
Error: package or namespace load failed for ‘sf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘smoothr.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘SmoothWin-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: SmoothWin
> ### Title: Implementation of the soft windowing on the linear models
> ### Aliases: SmoothWin
> ### Keywords: "Windowing", "SmoothWin"
> 
> ### ** Examples
> 
> # All examples use the Orthodont dataset in the nlme package
> library(nlme)
Error: package or namespace load failed for ‘nlme’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘smotefamily-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ANS
> ### Title: Adaptive Neighbor Synthetic Majority Oversampling TEchnique
> ### Aliases: ANS
> ### Keywords: ~kwd1 ~kwd2
> 
> ### ** Examples
> 
> 	data_example = sample_generator(5000,ratio = 0.80)
> 	genData = ANS(data_example[,-3],data_example[,3])
Error in which(knearD[, i] <= sizeP & OClevel == 0) : 
  object 'knearD' not found
Calls: ANS -> which
Execution halted
Running examples in ‘smovie-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: FPearson
> ### Title: Fisher's transformation of the Pearson product moment
> ###   correlation coefficient
> ### Aliases: FPearson dFPearson pFPearson qFPearson rFPearson
> 
> ### ** Examples
> 
> dFPearson(-1:1, N = 10)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SuppDists/libs/SuppDists.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SuppDists/libs/SuppDists.so: failed to map segment from shared object
Calls: dFPearson ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘smovie-vignette.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘smpic-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: smpic_save
> ### Title: Save a social media sized ggplot
> ### Aliases: smpic_save
> 
> ### ** Examples
> 
> library(dplyr)
Error: package or namespace load failed for ‘dplyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘make_a_social_media_plot.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Found the following apparent S3 methods exported but not registered:
  pairs.mod plot.glm.diag
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
Rd file 'plot.glm.diag.Rd':
  \usage lines wider than 90 characters:
     plot(x, glmdiag = glm.diag(x), subset = NULL, iden = FALSE, labels = NULL, ret = FALSE, ...)

Rd file 'poi.beta.laplace.Rd':
  \usage lines wider than 90 characters:
     poi.beta.laplace(data, alpha = get.alpha(data), phi = 1, nu = 0.1, beta = seq(from = 0, to = 7, length = 1000))

These lines will be truncated in the PDF manual.
Running examples in ‘SMPracticals-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: blalock
> ### Title: Blalock-Taussig Shunt Data
> ### Aliases: blalock
> ### Keywords: datasets
> 
> ### ** Examples
> 
> data(blalock)
> library(survival)
Error: package or namespace load failed for ‘survival’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Matrix/libs/Matrix.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Matrix/libs/Matrix.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sm/libs/sm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sm/libs/sm.so: failed to map segment from shared object
Execution halted
dNMR: no visible global function definition for ‘pnorm’
dNMR: no visible global function definition for ‘dnorm’
pNMR: no visible global function definition for ‘pnorm’
pNMR: no visible global function definition for ‘dnorm’
rMR: no visible global function definition for ‘rnorm’
rMR: no visible global function definition for ‘rchisq’
Undefined global functions or variables:
  dnorm pnorm rchisq rnorm
Consider adding
  importFrom("stats", "dnorm", "pnorm", "rchisq", "rnorm")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘smurf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SMUT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
SMVar.paired : <anonymous>: no visible global function definition for
  ‘var’
SMVar.paired: no visible global function definition for ‘var’
SMVar.paired: no visible global function definition for ‘pt’
SMVar.paired: no visible global function definition for ‘p.adjust’
SMVar.paired: no visible global function definition for ‘write.table’
SMVar.unpaired : <anonymous>: no visible global function definition for
  ‘var’
SMVar.unpaired: no visible global function definition for ‘var’
SMVar.unpaired: no visible global function definition for ‘pt’
SMVar.unpaired: no visible global function definition for ‘p.adjust’
SMVar.unpaired: no visible global function definition for ‘write.table’
Undefined global functions or variables:
  p.adjust pt var write.table
Consider adding
  importFrom("stats", "p.adjust", "pt", "var")
  importFrom("utils", "write.table")
to your NAMESPACE file.
Rd file 'SMVar.paired.Rd':
  \usage lines wider than 90 characters:
     SMVar.paired(geneNumbers, logratio, fileexport = NULL, minrep = 2, method = "BH", threshold = 0.05)

Rd file 'SMVar.unpaired.Rd':
  \usage lines wider than 90 characters:
     SMVar.unpaired(geneNumbers, listcond, fileexport = NULL, minrep = 2, method = "BH", threshold = 0.05)

These lines will be truncated in the PDF manual.
Running examples in ‘snakecase-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: caseconverter
> ### Title: Specific case converter shortcuts
> ### Aliases: caseconverter to_snake_case to_lower_camel_case
> ###   to_upper_camel_case to_screaming_snake_case to_parsed_case
> ###   to_mixed_case to_lower_upper_case to_upper_lower_case to_swap_case
> ###   to_sentence_case
> ### Keywords: utilities
> 
> ### ** Examples
> 
> strings <- c("this Is a Strange_string", "AND THIS ANOTHER_One", NA)
> 
> to_snake_case(strings)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: to_snake_case ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘caseconverters.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SnakeCharmR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘snappier’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/snappier/libs/snappier.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/snappier/libs/snappier.so: failed to map segment from shared object
Execution halted
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
problems found in ‘H.inv.select.Rd’, ‘allocative.efficiency.Rd’, ‘fit.boundary.Rd’, ‘fit.mean.Rd’, ‘fit.sf.Rd’, ‘technical.efficiency.change.Rd’
Running examples in ‘snfa-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: allocative.efficiency
> ### Title: Allocative efficiency estimation
> ### Aliases: allocative.efficiency
> 
> ### ** Examples
> 
> data(USMacro)
> 
> USMacro <- USMacro[complete.cases(USMacro),]
> 
> #Extract data
> X <- as.matrix(USMacro[,c("K", "L")])
> y <- USMacro$Y
> 
> X.price <- as.matrix(USMacro[,c("K.price", "L.price")])
> y.price <- rep(1e9, nrow(USMacro)) #Price of $1 billion of output is $1 billion
> 
> #Run model
> efficiency.model <- allocative.efficiency(X, y,
+                                          X.price, y.price,
+                                          X.constrained = X,
+                                          model = "br",
+                                          method = "mc")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: allocative.efficiency ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘snht’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘snnR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/snnR/libs/snnR.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/snnR/libs/snnR.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SnowballC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SnowballC/libs/SnowballC.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SnowballC/libs/SnowballC.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘snowboot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Package in Depends field not imported from: ‘snow’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
Error in re-building vignettes:
  ...
Error: processing vignette ‘snowflakes.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
KS.test: no visible global function definition for ‘quantile’
KS.test : Fgaus: no visible global function definition for ‘pnorm’
KS.test: no visible global function definition for ‘setNames’
cs.test: no visible global function definition for ‘pbinom’
cs.test: no visible global function definition for ‘pnorm’
cs.test: no visible global function definition for ‘setNames’
kde: no visible global function definition for ‘quantile’
kde : Fgaus: no visible global function definition for ‘pnorm’
kde: no visible global function definition for ‘par’
kre: no visible global function definition for ‘quantile’
kre: no visible global function definition for ‘lines’
ns.test: no visible global function definition for ‘complete.cases’
ns.test: no visible global function definition for ‘qnorm’
ns.test: no visible global function definition for ‘pnorm’
ns.test: no visible global function definition for ‘pchisq’
ns.test: no visible global function definition for ‘setNames’
ns.test: no visible global function definition for ‘qt’
quant.test: no visible global function definition for ‘complete.cases’
quant.test: no visible global function definition for ‘pbinom’
quant.test: no visible global function definition for ‘pnorm’
quant.test: no visible global function definition for ‘setNames’
quant.test: no visible global function definition for ‘quantile’
quant.test: no visible global function definition for ‘phyper’
runs.test: no visible global function definition for ‘median’
runs.test: no visible global function definition for ‘setNames’
runs.test: no visible global function definition for ‘pnorm’
Undefined global functions or variables:
  complete.cases lines median par pbinom pchisq phyper pnorm qnorm qt
  quantile setNames
Consider adding
  importFrom("graphics", "lines", "par")
  importFrom("stats", "complete.cases", "median", "pbinom", "pchisq",
             "phyper", "pnorm", "qnorm", "qt", "quantile", "setNames")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: haplo.stats
Error: package or namespace load failed for ‘haplo.stats’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘haplo.stats’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘snpEnrichment’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SNPknock’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘sNPLS-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: sNPLS
> ### Title: Fit a sNPLS model
> ### Aliases: sNPLS
> 
> ### ** Examples
> 
> X_npls<-array(rpois(7500, 10), dim=c(50, 50, 3))
> 
> Y_npls<-matrix(2+0.4*X_npls[,5,1]+0.7*X_npls[,10,1]-0.9*X_npls[,15,1]+
+ 0.6*X_npls[,20,1]- 0.5*X_npls[,25,1]+rnorm(50), ncol=1)
> 
> fit<-sNPLS(X_npls, Y_npls, ncomp=3, keepJ = rep(2,3) , keepK = rep(1,3))
Component number  1 
Number of iterations:  1 
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: sNPLS ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Packages listed in more than one of Depends, Imports, Suggests, Enhances:
  ‘mvtnorm’ ‘combinat’
A package should be listed in only one of these fields.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: grid
Error: package or namespace load failed for ‘snp.plotter’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘snpRF’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/snpRF/libs/snpRF.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/snpRF/libs/snpRF.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: snpStats
Loading required package: survival
Error: package or namespace load failed for ‘survival’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘survival’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: stats4
Error: package or namespace load failed for ‘sn’:
 .onLoad failed in loadNamespace() for ‘mnormt’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mnormt/libs/mnormt.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SNscan’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sns’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Found the following calls to attach():
File ‘SOAR/R/SOAR.R’:
  attach(NULL, pos, basename(directory))
See section ‘Good practice’ in ‘?attach’.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SobolSequence’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘socialmixr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SocialNetworks’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘social’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SoDA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SoDA/libs/SoDA.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SoDA/libs/SoDA.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: magic
Loading required package: abind
Loading required package: ppls
Loading required package: splines
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sodium’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sodium/libs/sodium.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sodium/libs/sodium.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sofa’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SOFIA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/png/libs/png.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/png/libs/png.so: failed to map segment from shared object
Execution halted
HardKMeansDemo: no visible global function definition for
  ‘graphics.off’
HardKMeansDemo: no visible global function definition for ‘plot’
HardKMeansDemo: no visible global function definition for ‘points’
initializeMeansMatrix: no visible global function definition for
  ‘runif’
initializeMeansMatrix: no visible global function definition for ‘dist’
normalizeMatrix: no visible global function definition for ‘sd’
plotRoughKMeans: no visible global function definition for
  ‘graphics.off’
plotRoughKMeans: no visible global function definition for ‘plot’
plotRoughKMeans: no visible global function definition for ‘points’
Undefined global functions or variables:
  dist graphics.off plot points runif sd
Consider adding
  importFrom("grDevices", "graphics.off")
  importFrom("graphics", "plot", "points")
  importFrom("stats", "dist", "runif", "sd")
to your NAMESPACE file.
Error in re-building vignettes:
  ...
Error: processing vignette ‘exporting-xml.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘soilcarbon’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: aqp
Error: package or namespace load failed for ‘aqp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘aqp’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rpanel
Loading required package: tcltk
Package `rpanel', version 1.1-4: type help(rpanel) for summary information
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SOIL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘soil.spec’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KernSmooth/libs/KernSmooth.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KernSmooth/libs/KernSmooth.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘soiltexture’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘solarius’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘solartime’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘solitude’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘solrium’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘SolveRationalMatrixEquation.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘soma’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ore/libs/ore.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ore/libs/ore.so: failed to map segment from shared object
Execution halted
bm: no visible global function definition for ‘rnorm’
bm: no visible global function definition for ‘ts’
fbm: no visible global function definition for ‘fft’
fbm: no visible global function definition for ‘rnorm’
fbm: no visible global function definition for ‘ts’
gbm: no visible global function definition for ‘rnorm’
gbm: no visible global function definition for ‘ts’
Undefined global functions or variables:
  fft rnorm ts
Consider adding
  importFrom("stats", "fft", "rnorm", "ts")
to your NAMESPACE file.
getAlpha: no visible global function definition for ‘pbinom’
kfweOrd: no visible global function definition for ‘qnbinom’
Undefined global functions or variables:
  pbinom qnbinom
Consider adding
  importFrom("stats", "pbinom", "qnbinom")
to your NAMESPACE file.
Warning: no function found corresponding to methods exports from ‘someMTP’ for: ‘show’

A namespace must be able to be loaded with just the base namespace
loaded: otherwise if the namespace gets loaded by a saved object, the
session will be unable to start.

Probably some imports need to be declared in the NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘som.nn’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘som’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/som/libs/som.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/som/libs/som.so: failed to map segment from shared object
Execution halted
dfrag: no visible global function definition for ‘qgeom’
dfrag: no visible global function definition for ‘plogis’
dfrag: no visible global function definition for ‘dgeom’
estAbund: no visible global function definition for ‘xtabs’
mmN : <anonymous>: no visible global function definition for ‘uniroot’
pfrag: no visible global function definition for ‘qgeom’
phi.deriv.default: no visible global function definition for
  ‘model.matrix’
phi.deriv.default: no visible binding for global variable ‘sd’
phi.update.default: no visible global function definition for ‘glm’
phi.update.default: no visible binding for global variable
  ‘quasipoisson’
phi.update.default: no visible global function definition for ‘predict’
phi.update.lframe: no visible global function definition for ‘glm’
phi.update.lframe: no visible binding for global variable
  ‘quasipoisson’
phi.update.lframe: no visible global function definition for ‘predict’
pr.y.given.x : <anonymous>: no visible global function definition for
  ‘dpois’
pr.y.given.x : <anonymous> : <anonymous>: no visible global function
  definition for ‘dpois’
pr.y.given.x : <anonymous>: no visible global function definition for
  ‘convolve’
qfrag: no visible global function definition for ‘qgeom’
rfrag: no visible global function definition for ‘qgeom’
simSonic: no visible global function definition for ‘rpois’
Undefined global functions or variables:
  convolve dgeom dpois glm model.matrix plogis predict qgeom
  quasipoisson rpois sd uniroot xtabs
Consider adding
  importFrom("stats", "convolve", "dgeom", "dpois", "glm",
             "model.matrix", "plogis", "predict", "qgeom",
             "quasipoisson", "rpois", "sd", "uniroot", "xtabs")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘soobench’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/soobench/libs/soobench.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/soobench/libs/soobench.so: failed to map segment from shared object
Execution halted
Running examples in ‘sophisthse-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: get_stat_hse_info_vector
> ### Title: Obtain additional information for specific time series
> ### Aliases: get_stat_hse_info_vector
> 
> ### ** Examples
> 
> info <- sophisthse:::get_stat_hse_info_vector('IP_EA_Q', 1, 'methodology')
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Calls: <Anonymous> ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘sophisthse_intro.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Non-standard files/directories found at top level:
  ‘README.markdown’ ‘build_package.sh’ ‘upload.sh’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sortinghat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sorvi’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Running examples in ‘sos-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: findFn
> ### Title: Search Help Pages
> ### Aliases: findFn ? ???
> ### Keywords: misc
> 
> ### ** Examples
> 
> # Skip these tests on CRAN,
> # because they take more than 5 seconds
> if(!fda::CRAN()){
+ 
+ z <- findFn("spline", maxPages = 2)
+ # alternative
+ zq <- ???spline(2)
+ 
+ ## Don't show: 
+ stopifnot(
+ ## End(Don't show)
+ all.equal(z, zq)
+ ## Don't show: 
+ )
+ ## End(Don't show)
+ 
+ # To search for 2 terms, not necessarily together:
+ RSS <- findFn('RSiteSearch function', 1)
+ matches(RSS)
+ 
+ # To search for an exact string, use braces:
+ RSS. <- findFn('{RSiteSearch function}', 1)
+ matches(RSS.) # list(nrow = 0, matches = 0)
+ 
+ # example in which resulting page has some unicode characters
+ Lambert <- findFn("Lambert")
+ Lambert
+ ##
+ ## Too many matches
+ ##
+ fa <- findFn('factor analysis')
+ # Finds too many matches to process;
+ # reports Inf matches but returns none.
+ # When this happens, use a more restrictive search
+ 
+ # check
+ fa0 <- RSS.[seq(1, length=0),]
+ attr(fa0, 'matches') <- Inf
+ attr(fa0, 'PackageSummary') <- PackageSummary(fa0)
+ attr(fa0, 'string') <- 'factor+analysis'
+ attr(fa0, 'call') <- call('findFn', string = "factor analysis")
+ 
+ ## Don't show: 
+ stopifnot(
+ ## End(Don't show)
+ all.equal(fa, fa0)
+ ## Don't show: 
+ )
+ ## End(Don't show)
+ }
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: :: ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...

Error: processing vignette ‘sos.Rnw’ failed with diagnostics:
 chunk 3 (label = PL.RSiteSearch) 
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sotkanet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bitops/libs/bitops.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘soundecology’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Package suggested but not available for checking: ‘SciencesPo’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SoundexBR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SoundexBR/libs/SoundexBR.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SoundexBR/libs/SoundexBR.so: failed to map segment from shared object
Execution halted
Running examples in ‘soundgen-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: addFormants
> ### Title: Add formants
> ### Aliases: addFormants
> 
> ### ** Examples
> 
> sound = c(rep(0, 1000), runif(16000), rep(0, 1000))  # white noise
> # NB: pad with silence to avoid artefacts if removing formants
> # playme(sound)
> # spectrogram(sound, samplingRate = 16000)
> 
> # add F1 = 900, F2 = 1300 Hz
> sound_filtered = addFormants(sound, formants = c(900, 1300))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: addFormants ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘acoustic_analysis.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Package suggested but not available for checking: ‘r2cytoscape’
Error in .requirePackage(package) : 
    unable to find required package 'graph'
  Calls: <Anonymous> ... .extendsForS3 -> extends -> getClassDef -> .requirePackage
  Execution halted
Running examples in ‘SourceSet-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: easyLookSource
> ### Title: Easy look results
> ### Aliases: easyLookSource
> 
> ### ** Examples
> 
> ## Load the SourceSetObj obtained from the source set analysis of ALL dataset
> 
> # see vignette for more details
> print(load(file=system.file("extdata","ALLsourceresult.RData",package = "SourceSet")))
[1] "results.all"
> class(results.all)
[1] "sourceSetList"
> n.primary<-length(lapply(results.all,function(x) x$primarySet))
> 
> # show only genes that appear in at least one of the source sets of the investigated pathways
> easyLookSource(sourceObj=results.all, maxnum.variable = n.primary,
+                label.variable = "Genes",label.graph = "Pathways")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: easyLookSource ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘SourceSet.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sourcetools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sourcetools/libs/sourcetools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sourcetools/libs/sourcetools.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SoyNAM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
SPA: no visible global function definition for ‘var’
Score.Test.Interact: no visible global function definition for ‘pchisq’
Score.Test.Overall: no visible global function definition for ‘var’
Score.Test.Overall: no visible global function definition for ‘pchisq’
Undefined global functions or variables:
  pchisq var
Consider adding
  importFrom("stats", "pchisq", "var")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpaCCr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tcltk
Loading required package: coda
Error: package or namespace load failed for ‘coda’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘coda’ could not be loaded
Execution halted
Running examples in ‘spaceNet-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: multiNet
> ### Title: Latent Space Models for Multivariate Networks
> ### Aliases: multiNet print.multiNet
> 
> ### ** Examples
> 
> data(vickers)
> alphaR <- alphaRef(vickers, D = 2)  # compute alpha reference value
> 
> it <- 10     # small number of iterations just for example
> 
> # 2-dimensional latent space model, no covariates
> mod <- multiNet(vickers, niter = it, D = 2,
+                 alphaRef = alphaR)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/statnet.common/libs/statnet.common.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/statnet.common/libs/statnet.common.so: failed to map segment from shared object
Calls: multiNet ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘space’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/space/libs/space.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/space/libs/space.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘isotherms.rnw’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spacetime’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spacom’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spacyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: mapproj
Loading required package: maps
Error: package or namespace load failed for ‘maps’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/maps/libs/maps.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/maps/libs/maps.so: failed to map segment from shared object
Error: package ‘maps’ could not be loaded
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘v1_workflow.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpaDES.addins’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: quickPlot
Error: package or namespace load failed for ‘quickPlot’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Error: package ‘quickPlot’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpaDES’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpaDES.tools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spaero’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spaero/libs/spaero.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spaero/libs/spaero.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spam64’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spam64/libs/spam64.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spam64/libs/spam64.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spaMM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: dotCall64
Error: package or namespace load failed for ‘dotCall64’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so: failed to map segment from shared object
Error: package ‘dotCall64’ could not be loaded
Execution halted
hausman: no visible global function definition for ‘pchisq’
span.formula: no visible global function definition for ‘model.frame’
span.formula: no visible global function definition for ‘model.matrix’
span.formula: no visible global function definition for
  ‘model.response’
spbe: no visible global function definition for ‘cor’
spbe: no visible global function definition for ‘pt’
spfe: no visible global function definition for ‘cor’
spfe: no visible global function definition for ‘pt’
sprandom: no visible global function definition for ‘cor’
sprandom: no visible global function definition for ‘pt’
summary.span: no visible global function definition for ‘printCoefmat’
Undefined global functions or variables:
  cor model.frame model.matrix model.response pchisq printCoefmat pt
Consider adding
  importFrom("stats", "cor", "model.frame", "model.matrix",
             "model.response", "pchisq", "printCoefmat", "pt")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: magrittr
Loading required package: xml2
Error: package or namespace load failed for ‘xml2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘xml2’ could not be loaded
Execution halted
Running examples in ‘spant-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: fit_mrs
> ### Title: Perform a fit based analysis of MRS data.
> ### Aliases: fit_mrs
> 
> ### ** Examples
> 
> fname <- system.file("extdata","philips_spar_sdat_WS.SDAT",package="spant")
> svs <- read_mrs(fname, format="spar_sdat")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: read_mrs ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘spant-intro.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparcl’:
 .onLoad failed in loadNamespace() for ‘sparcl’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sparcl/libs/sparcl.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sparcl/libs/sparcl.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sparc/libs/sparc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sparc/libs/sparc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spareserver’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/pingr/libs/pingr.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/pingr/libs/pingr.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparkavro’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparkbq’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparkline’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparklyr.nested’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparklyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spark.sas7bdat’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: Cairo
Error: package or namespace load failed for ‘Cairo’:
 .onLoad failed in loadNamespace() for ‘Cairo’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Cairo/libs/Cairo.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Cairo/libs/Cairo.so: failed to map segment from shared object
Error: package ‘Cairo’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparkwarc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/base64enc/libs/base64enc.so: failed to map segment from shared object
Execution halted
f.I2.cont: no visible global function definition for ‘combn’
f.I2.dich: no visible global function definition for ‘combn’
f.pstar.cont: no visible global function definition for ‘combn’
f.pstar.dich: no visible global function definition for ‘combn’
Undefined global functions or variables:
  combn
Consider adding
  importFrom("utils", "combn")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: sparsebnUtils
Loading required package: ccdrAlgorithm
Error: package or namespace load failed for ‘ccdrAlgorithm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘ccdrAlgorithm’ could not be loaded
Execution halted
Running examples in ‘sparsebnUtils-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: fit_multinom_dag
> ### Title: Inference in discrete Bayesian networks
> ### Aliases: fit_multinom_dag
> 
> ### ** Examples
> 
> 
> ### construct a random data set
> x <- c(0,1,0,1,0)
> y <- c(1,0,1,0,1)
> z <- c(0,1,2,1,0)
> a <- c(1,1,1,0,0)
> b <- c(0,0,1,1,1)
> dat <- data.frame(x, y, z, a, b)
> 
> ### randomly construct an edgelist of a graph
> nnode <- ncol(dat)
> li <- vector("list", length = nnode)
> li[[1]] <- c(2L,4L)
> li[[2]] <- c(3L,4L,5L)
> li[[3]] <- integer(0)
> li[[4]] <- integer(0)
> li[[5]] <- integer(0)
> edgeL <- edgeList(li)
> 
> ### run fit_multinom_dag
> fit.multinom <- fit_multinom_dag(edgeL, dat)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nnet/libs/nnet.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nnet/libs/nnet.so: failed to map segment from shared object
Calls: fit_multinom_dag ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘SparseDC.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘sparseEigen-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: spEigen
> ### Title: Sparse Spectral Decomposition of a Matrix
> ### Aliases: spEigen
> 
> ### ** Examples
> 
> library(sparseEigen)
> n <- 100  # samples
> m <- 500  # dimension
> q <- 3  # number of sparse eigenvectors to be estimated
> sp_card <- 0.1*m  # sparsity of each eigenvector
> 
> # generate covariance matrix with sparse eigenvectors
> V <- matrix(0, m, q)
> V[cbind(seq(1, q*sp_card), rep(1:q, each = sp_card))] <- 1/sqrt(sp_card)
> V <- cbind(V, matrix(rnorm(m*(m-q)), m, m-q))
> V <- qr.Q(qr(V))  # orthogonalize eigenvectors
> lmd <- c(100*seq(from = q, to = 1), rep(1, m-q))  # generate eigenvalues
> R <- V %*% diag(lmd) %*% t(V)  # covariance matrix
> 
> # generate data
> X <- MASS::mvrnorm(n, rep(0, m), R)  # random data with underlying sparse structure
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: :: ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘SparseEigenvectors.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparseHessianFD’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘sparseIndexTracking-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: spIndexTrack
> ### Title: Sparse Index Tracking
> ### Aliases: spIndexTrack
> 
> ### ** Examples
> 
> library(sparseIndexTracking)
> library(xts)
Loading required package: zoo
Error: package or namespace load failed for ‘zoo’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘zoo’ could not be loaded
Execution halted
Error in re-building vignettes:
  ...
Error in loadVignetteBuilder(vigns$pkgdir) : 
  vignette builder ‘prettydoc’ not found
Calls: buildVignettes -> loadVignetteBuilder
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparseinv’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparseLDA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SparseLPM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: robustHD
Loading required package: ggplot2
Error: package or namespace load failed for ‘ggplot2’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘ggplot2’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: doRNG
Loading required package: foreach
Loading required package: rngtools
Loading required package: pkgmaker
Loading required package: registry
Error: package or namespace load failed for ‘pkgmaker’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Error: package ‘pkgmaker’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SparseM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SparseM/libs/SparseM.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SparseM/libs/SparseM.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparseMVN’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparsepca’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparseSEM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sparseSEM/libs/sparseSEM.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sparseSEM/libs/sparseSEM.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparsesvd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparseSVM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sparseSVM/libs/sparseSVM.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sparseSVM/libs/sparseSVM.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SparseTSCGM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/glasso/libs/glasso.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/glasso/libs/glasso.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
  The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Error: processing vignette ‘using.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sparsio’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spass’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spatgraphs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘SpatialAcc-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: GR.Hospitals
> ### Title: Greek Hospitals
> ### Aliases: GR.Hospitals
> ### Keywords: datasets Greek Public Hospitals
> 
> ### ** Examples
> 
> data(GR.Hospitals)
> hist(GR.Hospitals$Beds15)
Loading required package: sp
Error: package or namespace load failed for ‘sp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error in .requirePackage(package) : unable to find required package ‘sp’
Calls: hist ... .findInheritedMethods -> getClass -> getClassDef -> .requirePackage
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpatialBall’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spatialEco’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpatialExtremes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/maps/libs/maps.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/maps/libs/maps.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: abind
Loading required package: fields
Loading required package: spam
Loading required package: dotCall64
Error: package or namespace load failed for ‘dotCall64’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so: failed to map segment from shared object
Error: package ‘dotCall64’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: SpatialExtremes
Error: package or namespace load failed for ‘SpatialExtremes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/maps/libs/maps.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/maps/libs/maps.so: failed to map segment from shared object
Error: package ‘SpatialExtremes’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpatialGraph’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spatialkernel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatialkernel/libs/spatialkernel.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatialkernel/libs/spatialkernel.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: SocialNetworks
Error: package or namespace load failed for ‘SocialNetworks’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘SocialNetworks’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpatialNP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SpatialNP/libs/SpatialNP.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SpatialNP/libs/SpatialNP.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpatialPack’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SpatialPack/libs/SpatialPack.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SpatialPack/libs/SpatialPack.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spatial’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatial/libs/spatial.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatial/libs/spatial.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spatialrisk’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: cubature
Error: package or namespace load failed for ‘cubature’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘cubature’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spatial.tools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mmap/libs/mmap.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mmap/libs/mmap.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpatialTools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpatialVS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spatialwarnings’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpaTimeClus’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpatMCA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpatPCA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spatsoc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpATS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spatstat.data’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: spatstat.data
Error: package or namespace load failed for ‘spatstat.data’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so: failed to map segment from shared object
Error: package ‘spatstat.data’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spatstat.utils’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spatstat.utils/libs/spatstat.utils.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spatsurv’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spbabel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spBayesSurv’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Spbsampling’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘CUSUM_LinearRegression.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: parallel
Loading required package: MASS
Error: package or namespace load failed for ‘MASS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘MASS’ could not be loaded
Execution halted
GenerateCliquesCovariance: no visible global function definition for
  ‘rnorm’
Undefined global functions or variables:
  rnorm
Consider adding
  importFrom("stats", "rnorm")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spCP’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spc/libs/spc.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spc/libs/spc.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spcr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spcr/libs/spcr.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spcr/libs/spcr.so: failed to map segment from shared object
Execution halted
Package suggested but not available for checking: ‘spDataLarge’
Running examples in ‘spData-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: afcon
> ### Title: Spatial patterns of conflict in Africa 1966-78
> ### Aliases: afcon africa.rook.nb afxy paper.nb
> ### Keywords: datasets spdep
> 
> ### ** Examples
> 
> data(afcon)
> if (!requireNamespace("spdep", quietly = TRUE)) {
+   library(spdep)
+   plot(africa.rook.nb, afxy)
+   plot(diffnb(paper.nb, africa.rook.nb), afxy, col="red", add=TRUE)
+   text(afxy, labels=attr(africa.rook.nb, "region.id"), pos=4, offset=0.4)
+   moran.test(afcon$totcon, nb2listw(africa.rook.nb))
+   moran.test(afcon$totcon, nb2listw(paper.nb))
+   geary.test(afcon$totcon, nb2listw(paper.nb))
+ }
Loading required package: sp
Error: package or namespace load failed for ‘sp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sp/libs/sp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sp/libs/sp.so: failed to map segment from shared object
Error: package ‘sp’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KernSmooth/libs/KernSmooth.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/KernSmooth/libs/KernSmooth.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spduration’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘speaq’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spearmanCI’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
bartlett: no visible global function definition for ‘pchisq’
local.rbfdot: no visible binding for global variable ‘sd’
local.rbfdot: no visible global function definition for ‘dist’
local.rbfdot : <anonymous>: no visible global function definition for
  ‘median’
speccalt: no visible global function definition for ‘kmeans’
Undefined global functions or variables:
  dist kmeans median pchisq sd
Consider adding
  importFrom("stats", "dist", "kmeans", "median", "pchisq", "sd")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpecHelpers’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SPECIES’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SPECIES/libs/SPECIES.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SPECIES/libs/SPECIES.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘specklestar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Package suggested but not available for checking: ‘rcytoscapejs’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘specmine’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpecsVerification’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spectacles’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spectralAnalysis’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpectralMap’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spectral.methods’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: rasterImage
Loading required package: plotrix
Error: package or namespace load failed for ‘spectral’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spectrolab’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spef’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quadprog/libs/quadprog.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: lmomco
Error: package or namespace load failed for ‘lmomco’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/goftest/libs/goftest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/goftest/libs/goftest.so: failed to map segment from shared object
Error: package ‘lmomco’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spellcheckr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Running examples in ‘spelling-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: spell_check_files
> ### Title: Spell Check
> ### Aliases: spell_check_files spell_check_text
> 
> ### ** Examples
> 
> # Example files
> files <- list.files(system.file("examples", package = "knitr"),
+   pattern = "\\.(Rnw|Rmd|html)$", full.names = TRUE)
> spell_check_files(files)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: spell_check_files ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spemd’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MBA/libs/MBA.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MBA/libs/MBA.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spe’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spe/libs/spe.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spe/libs/spe.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sperrorest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘spew-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot_pop_totals
> ### Title: Plot characteristic summary output from
> ###   summarize_top_spew_region as totals
> ### Aliases: plot_pop_totals
> 
> ### ** Examples
> 
> data(tartanville)
> 
> tartanville_syneco <- spew(tartanville$pop_table, tartanville$shapefile, 
+                            tartanville$pums_h, tartanville$pums_p)
Loading required package: sp
Error: package or namespace load failed for ‘sp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sp/libs/sp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sp/libs/sp.so: failed to map segment from shared object
Error in .requirePackage(package) : unable to find required package ‘sp’
Calls: spew ... .findInheritedMethods -> getClass -> getClassDef -> .requirePackage
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘spew-quickstart.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spex’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/png/libs/png.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/png/libs/png.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: moments
Loading required package: tmvtnorm
Loading required package: mvtnorm
Error: package or namespace load failed for ‘mvtnorm’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Error: package ‘mvtnorm’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spGARCH’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spgs’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spgs/libs/spgs.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spgs/libs/spgs.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sphet’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spiderbar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spider’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spiders’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spikeSlabGAM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: emdbook
Error: package or namespace load failed for ‘emdbook’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Error: package ‘emdbook’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spind’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
spi: no visible global function definition for ‘read.table’
spi: no visible global function definition for ‘ecdf’
spi: no visible global function definition for ‘qnorm’
spi: no visible global function definition for ‘colorRampPalette’
spi: no visible global function definition for ‘filled.contour’
spi: no visible global function definition for ‘axis’
Undefined global functions or variables:
  axis colorRampPalette ecdf filled.contour qnorm read.table
Consider adding
  importFrom("grDevices", "colorRampPalette")
  importFrom("graphics", "axis", "filled.contour")
  importFrom("stats", "ecdf", "qnorm")
  importFrom("utils", "read.table")
to your NAMESPACE file.
prepare_Rd: spi.Rd:117-119: Dropping empty section \note
prepare_Rd: spi.Rd:123-125: Dropping empty section \seealso
Rd file 'spi.Rd':
  \examples lines wider than 100 characters:
     spi(7,"spi.txt",1963,2010,"Standardized Precipitation Index - Rio Grande do Norte State",1,"years","months")

These lines will be truncated in the PDF manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘splashr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘splines2-intro.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: compiler
Loading required package: corpcor
Loading required package: matrixStats
Error: package or namespace load failed for ‘matrixStats’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/matrixStats/libs/matrixStats.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/matrixStats/libs/matrixStats.so: failed to map segment from shared object
Error: package ‘matrixStats’ could not be loaded
Execution halted
Running examples in ‘splitfngr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: lbfgs_share
> ### Title: Use lbfgs packages's lbfgs function but pass in a single
> ###   function that returns both the function and gradient together in a
> ###   list. Useful when the function and gradient are expensive to
> ###   calculate and can be calculated faster together than separate.
> ### Aliases: lbfgs_share
> 
> ### ** Examples
> 
> quad_share <- function(x){list(sum(x^4), 4*x^3)}
> lbfgs_share(vars=c(3, -5), fngr=quad_share)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: lbfgs_share ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘splithalf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SplitSoftening’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SplitSoftening/libs/SplitSoftening.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SplitSoftening/libs/SplitSoftening.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘splitstackshape’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: spdep
Loading required package: sp
Error: package or namespace load failed for ‘sp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘sp’ could not be loaded
Execution halted
Running examples in ‘spls-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: cv.splsda
> ### Title: Compute and plot cross-validated error for SPLSDA classification
> ### Aliases: cv.splsda
> ### Keywords: models multivariate
> 
> ### ** Examples
> 
> data(prostate)
> set.seed(1)
> # misclassification rate plot. eta is searched between 0.1 and 0.9 and
> # number of hidden components is searched between 1 and 5
> ## Not run: 
> ##D  cv <- cv.splsda( prostate$x, prostate$y, K = c(1:5), eta = seq(0.1,0.9,0.1),
> ##D          scale.x=FALSE, fold=5 )
> ## End(Not run)
> ## Don't show: 
>  cv <- list(); cv$eta.opt <- 0.8; cv$K.opt <- 3; 
> ## End(Don't show)
> (splsda( prostate$x, prostate$y, eta=cv$eta.opt, K=cv$K.opt, scale.x=FALSE ))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: splsda ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘splus2R’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/splus2R/libs/splus2R.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/splus2R/libs/splus2R.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘splusTimeDate’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/splusTimeDate/libs/splusTimeDate.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/splusTimeDate/libs/splusTimeDate.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: splusTimeDate
Error: package or namespace load failed for ‘splusTimeDate’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/splusTimeDate/libs/splusTimeDate.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/splusTimeDate/libs/splusTimeDate.so: failed to map segment from shared object
Error: package ‘splusTimeDate’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spm12r’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/git2r/libs/git2r.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/git2r/libs/git2r.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spMC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spMC/libs/spMC.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spMC/libs/spMC.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spmoran’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/dotCall64/libs/dotCall64.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘spm.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SpNetPrep’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Running examples in ‘SpNMF-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: chty
> ### Title: chty
> ### Aliases: chty
> 
> ### ** Examples
> 
> 
> ##we use the simulated data spdata here
> ##the spdata is simulated from feature matrix combined by 2
> #3types features from one group and 3 types from the other.
> ##choose number of types using our function
> ##2-folds cross validation is used here
> ##the upper bound of number of types for both classes is 2
> ##remove all zero variables from the data
> spdata.rm=spdata[c(1:4,41:44),colSums(spdata)!=0]
> y=c(rep(1,4),rep(0,4))
> types=chty(spdata.rm,y,2,2)
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cluster/libs/cluster.so: failed to map segment from shared object
Calls: chty ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Running examples in ‘spnn-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: pnn.guess
> ### Title: pnn.guess
> ### Aliases: pnn.guess
> 
> ### ** Examples
> 
> library(spnn)
> data(norms)
> 
> pnn <- pnn.learn(norms)
> pnn.guess(nn = pnn, X = c(1,2))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Calls: pnn.guess ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spocc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spongecake’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Ell.Theta: no visible global function definition for ‘ell.theta’
confid.int.theta: no visible global function definition for ‘qchisq’
confid.int.theta : sim.c: no visible global function definition for
  ‘runif’
confid.int.theta: no visible global function definition for ‘quantile’
dd.est: no visible global function definition for ‘ecdf’
ks.sporm : Simul: no visible global function definition for ‘runif’
ks.stat: no visible global function definition for ‘ecdf’
plotor: no visible global function definition for ‘ecdf’
plotor: no visible global function definition for ‘plot’
test.theta: no visible global function definition for ‘ecdf’
test.theta : sim: no visible global function definition for ‘runif’
Undefined global functions or variables:
  ecdf ell.theta plot qchisq quantile runif
Consider adding
  importFrom("graphics", "plot")
  importFrom("stats", "ecdf", "qchisq", "quantile", "runif")
to your NAMESPACE file.
prepare_Rd: H.Binv.Rd:48-50: Dropping empty section \note
prepare_Rd: V.theta.Rd:28-30: Dropping empty section \details
prepare_Rd: V.theta.Rd:43-45: Dropping empty section \note
prepare_Rd: V.theta.Rd:49-51: Dropping empty section \seealso
prepare_Rd: V.theta.Rd:52-53: Dropping empty section \examples
prepare_Rd: confid.int.theta.Rd:62-64: Dropping empty section \note
prepare_Rd: dd.est.Rd:39-41: Dropping empty section \note
prepare_Rd: dd.est.Rd:45-47: Dropping empty section \seealso
prepare_Rd: ell.theta.Rd:60-62: Dropping empty section \note
prepare_Rd: ell.theta.Rd:69-70: Dropping empty section \examples
prepare_Rd: grad.hessinv.Rd:47-49: Dropping empty section \note
prepare_Rd: ks.sporm.Rd:43-45: Dropping empty section \note
prepare_Rd: ks.stat.Rd:39-41: Dropping empty section \note
prepare_Rd: mrle.sporm.Rd:66-68: Dropping empty section \note
prepare_Rd: mrle.sporm.Rd:72-74: Dropping empty section \seealso
prepare_Rd: newton.theta.Rd:47-49: Dropping empty section \note
prepare_Rd: phi.Rd:32-38: Dropping empty section \value
prepare_Rd: phi.Rd:48-50: Dropping empty section \note
prepare_Rd: plotor.Rd:26-32: Dropping empty section \value
prepare_Rd: plotor.Rd:42-44: Dropping empty section \note
prepare_Rd: plotor.Rd:48-50: Dropping empty section \seealso
prepare_Rd: sporm-package.Rd:53-54: Dropping empty section \seealso
prepare_Rd: sporm-package.Rd:55-56: Dropping empty section \examples
prepare_Rd: test.theta.Rd:54-56: Dropping empty section \note
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sport’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
fetch_NBAPlayerStatistics: no visible global function definition for
  ‘read.table’
Undefined global functions or variables:
  read.table
Consider adding
  importFrom("utils", "read.table")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: shinyBS
Error: package or namespace load failed for ‘shinyBS’:
 .onAttach failed in attachNamespace() for ‘shinyBS’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Error: package ‘shinyBS’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spotifyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SPOT’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/DEoptim/libs/DEoptim.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/DEoptim/libs/DEoptim.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sppmix’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Installation failed.
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/spp.Rcheck/00install.out’ for details.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spray’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SPreFuGED’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Biobase/libs/Biobase.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Biobase/libs/Biobase.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sprex’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/maps/libs/maps.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/maps/libs/maps.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: CoxBoost
Loading required package: survival
Error: package or namespace load failed for ‘survival’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘survival’ could not be loaded
Execution halted
Rd file 'SlrArd.Rd':
  \usage lines wider than 90 characters:
     SlrArd(T, X, bias = TRUE, method = c("VB", "VBMacKay", "PX-VB"), control = list(), check.lb=TRUE, a0 = 0, b0 = 0, mu0 = 0, xi0 = 1)

These lines will be truncated in the PDF manual.
plot.SPRT: no visible global function definition for ‘par’
plot.SPRT: no visible global function definition for ‘plot’
plot.SPRT: no visible global function definition for ‘abline’
print.SPRT: no visible global function definition for ‘head’
Undefined global functions or variables:
  abline head par plot
Consider adding
  importFrom("graphics", "abline", "par", "plot")
  importFrom("utils", "head")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spsann’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SPSL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SPSL/libs/SPSL.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SPSL/libs/SPSL.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: spTimer
Error: package or namespace load failed for ‘spTimer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘spTimer’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sptemExp’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spTest’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spTimer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spt’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spt/libs/spt.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/spt/libs/spt.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘spup’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SPUTNIK’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SQDA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/PDSCE/libs/PDSCE.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/PDSCE/libs/PDSCE.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: gsubfn
Loading required package: proto
Loading required package: RSQLite
Error: package or namespace load failed for ‘RSQLite’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘RSQLite’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sqliter’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SqlRender’:
 .onLoad failed in loadNamespace() for ‘rJava’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rJava/libs/rJava.so: failed to map segment from shared object
Execution halted
Running examples in ‘sqlscore-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: create_statement
> ### Title: Generate a CREATE TABLE statement from a model
> ### Aliases: create_statement
> 
> ### ** Examples
> 
> # Basic create statements
> mod <- glm(Sepal.Length ~ Sepal.Width + Petal.Length + Petal.Width + Species,
+            data=datasets::iris)
> create_statement(mod, src_table="tbl_name", dest_table="target_tbl")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Calls: create_statement ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SQRL’:
 .onLoad failed in loadNamespace() for ‘SQRL’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RODBC/libs/RODBC.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RODBC/libs/RODBC.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘squid’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
plot.srafit: no visible global function definition for ‘layout’
plot.srafit: no visible global function definition for ‘par’
sraData : vartruncGauss : ff: no visible global function definition for
  ‘dnorm’
sraData : vartruncGauss : ff: no visible global function definition for
  ‘pnorm’
sraData : vartruncGauss: no visible global function definition for
  ‘uniroot’
sraPlotMean: no visible global function definition for ‘axis’
sraPlotMean: no visible global function definition for ‘points’
sraPlotMean: no visible global function definition for ‘lines’
sraPlotMeanResid: no visible global function definition for ‘axis’
sraPlotMeanResid: no visible global function definition for ‘abline’
sraPlotMeanResid: no visible global function definition for ‘points’
sraPlotVar: no visible global function definition for ‘axis’
sraPlotVar: no visible global function definition for ‘points’
sraPlotVar: no visible global function definition for ‘lines’
sraPlotVarResid: no visible global function definition for ‘axis’
sraPlotVarResid: no visible global function definition for ‘abline’
sraPlotVarResid: no visible global function definition for ‘points’
sraPlotlegend: no visible global function definition for ‘legend’
sraStartingvalues : sraStartingvalues.mu0: no visible global function
  definition for ‘rnorm’
sraStartingvalues : sraStartingvalues.logvarA0: no visible global
  function definition for ‘rnorm’
sraStartingvalues : sraStartingvalues.logvarE0: no visible global
  function definition for ‘rnorm’
sraStartingvalues: no visible global function definition for ‘rnorm’
Undefined global functions or variables:
  abline axis dnorm layout legend lines par pnorm points rnorm uniroot
Consider adding
  importFrom("graphics", "abline", "axis", "layout", "legend", "lines",
             "par", "points")
  importFrom("stats", "dnorm", "pnorm", "rnorm", "uniroot")
to your NAMESPACE file.
Found the following hidden files and directories:
  .Rapp.history
  inst/script/.Rapp.history
These were most likely included in error. See section ‘Package
structure’ in the ‘Writing R Extensions’ manual.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sROC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sROC/libs/sROC.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sROC/libs/sROC.so: failed to map segment from shared object
Execution halted
Running examples in ‘srp-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ncs
> ### Title: The natural cubic spline interpolation of a matrix
> ### Aliases: ncs
> 
> ### ** Examples
> 
> x <- matrix(rnorm(100), ncol=10)
> ncs(x)$cf0
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Calls: ncs ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tcltk
Loading required package: tcltk2
Loading required package: gtools
Error: package or namespace load failed for ‘gtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gtools/libs/gtools.so: failed to map segment from shared object
Error: package ‘gtools’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘srvyr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ss3sim’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ssa’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ssa/libs/ssa.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ssa/libs/ssa.so: failed to map segment from shared object
Execution halted
Running examples in ‘ssc-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: coBC
> ### Title: CoBC method
> ### Aliases: coBC
> 
> ### ** Examples
> 
> 
> library(ssc)
> 
> ## Load Wine data set
> data(wine)
> 
> cls <- which(colnames(wine) == "Wine")
> x <- wine[, -cls] # instances without classes
> y <- wine[, cls] # the classes
> x <- scale(x) # scale the attributes
> 
> ## Prepare data
> set.seed(20)
> # Use 50% of instances for training
> tra.idx <- sample(x = length(y), size = ceiling(length(y) * 0.5))
> xtrain <- x[tra.idx,] # training instances
> ytrain <- y[tra.idx]  # classes of training instances
> # Use 70% of train instances as unlabeled set
> tra.na.idx <- sample(x = length(tra.idx), size = ceiling(length(tra.idx) * 0.7))
> ytrain[tra.na.idx] <- NA # remove class information of unlabeled instances
> 
> # Use the other 50% of instances for inductive testing
> tst.idx <- setdiff(1:length(y), tra.idx)
> xitest <- x[tst.idx,] # testing instances
> yitest <- y[tst.idx] # classes of testing instances
> 
> ## Example: Training from a set of instances with 1-NN as base classifier.
> set.seed(1)
> m1 <- coBC(x = xtrain, y = ytrain, 
+            learner = caret::knn3, 
+            learner.pars = list(k = 1),
+            pred = "predict")
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Calls: coBC ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SSDM’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SDMTools/libs/SDMTools.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SDMTools/libs/SDMTools.so: failed to map segment from shared object
Execution halted
ssd : correction_method_D: no visible global function definition for
  ‘rnorm’
ssd : generate_bootstrap: no visible global function definition for
  ‘rmultinom’
ssd : bootstrap_method: no visible global function definition for
  ‘median’
ssd : bootstrap_method: no visible global function definition for
  ‘quantile’
ssd : unbalanced_generate_bootstrap: no visible global function
  definition for ‘rmultinom’
ssd : unbalanced_bootstrap_method: no visible global function
  definition for ‘median’
ssd : unbalanced_bootstrap_method: no visible global function
  definition for ‘quantile’
ssd: no visible global function definition for ‘qchisq’
Undefined global functions or variables:
  median qchisq quantile rmultinom rnorm
Consider adding
  importFrom("stats", "median", "qchisq", "quantile", "rmultinom",
             "rnorm")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ssdtools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: BDgraph
Error: package or namespace load failed for ‘BDgraph’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/igraph/libs/igraph.so: failed to map segment from shared object
Error: package ‘BDgraph’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ssh’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ssh/libs/ssh.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ssh/libs/ssh.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ssizeRNA’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Biobase/libs/Biobase.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Biobase/libs/Biobase.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SSLASSO’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SSLASSO/libs/SSLASSO.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/SSLASSO/libs/SSLASSO.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SSL’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ssmn’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/evd/libs/evd.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/evd/libs/evd.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘SSM.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: sampleSelection
Loading required package: maxLik
Loading required package: miscTools
Error: package or namespace load failed for ‘maxLik’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘maxLik’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘ssmsn’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sspline’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sspline/libs/sspline.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sspline/libs/sspline.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: parallel
Error: package or namespace load failed for ‘sspse’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Running examples in ‘SSRA-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: summary.seqtable
> ### Title: Sequential Relationship Table Summary
> ### Aliases: summary.seqtable
> 
> ### ** Examples
> 
> # Example data based on Takeya (1991)
> 
> # Sakai Sequential Relation Analysis
> # ordering assesed according to the correlation coefficient and mean difference
> exdat.ssra <- SSRA(exdat, output = FALSE)
> exdat.seqtab<- seqtable(exdat.ssra, output = FALSE)
> summary(exdat.seqtab)

 Sequential path: 4 variables (n = 1)
	 Item1 -> Item2 -> Item3 -> Item5 

 Sequential path: 3 variables (n = 3)
	 Item1 -> Item2 -> Item4 
	 Item1 -> Item2 -> Item5 
	 Item1 -> Item3 -> Item5 

 Sequential path: 2 variables (n = 2)
	 Item1 -> Item4 
	 Item1 -> Item5 

 Equal path: 2 variables (n = 2)
	 Item3 = Item4 
	 Item4 = Item5 

Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Calls: summary ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Running examples in ‘ssrm.logmer-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ssrm.logmer
> ### Title: Sample Size Determination for Longitudinal Designs with Binary
> ###   Outcome
> ### Aliases: ssrm.logmer
> 
> ### ** Examples
> 
> ssrm.logmer(nt=4,Xd=c(0,1,2,3),betap=c(1,0,0.1,0.3),var.ri=0.5,
+             ratio=0.5,xi1=c(0,0,0,1),xi2=c(0.1,0.1,0.2,0.6))
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/statmod/libs/statmod.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/statmod/libs/statmod.so: failed to map segment from shared object
Calls: ssrm.logmer ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘SSRMST’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sssc’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/class/libs/class.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sss’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Sstack’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForest/libs/randomForest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/randomForest/libs/randomForest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘sstModel’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
error.est : <anonymous>: no visible global function definition for
  ‘median’
holm.robust: no visible global function definition for ‘pnorm’
holm.robust: no visible global function definition for ‘median’
holm.robust: no visible global function definition for ‘mad’
huberize: no visible global function definition for ‘quantile’
ssvd.initial: no visible global function definition for ‘mad’
ssvd.iter.thresh: no visible global function definition for ‘mad’
Undefined global functions or variables:
  mad median pnorm quantile
Consider adding
  importFrom("stats", "mad", "median", "pnorm", "quantile")
to your NAMESPACE file.
Loading this package had a fatal error status code 1
Loading log:
Loading required package: GIGrvg
Error: package or namespace load failed for ‘GIGrvg’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/GIGrvg/libs/GIGrvg.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/GIGrvg/libs/GIGrvg.so: failed to map segment from shared object
Error: package ‘GIGrvg’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stability’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stablelearner’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/mvtnorm/libs/mvtnorm.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stablespec’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/graph/libs/BioC_graph.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/graph/libs/BioC_graph.so: failed to map segment from shared object
Execution halted
Error in re-building vignettes:
  ...
Error: processing vignette ‘Using_stabs.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘Stack’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bit/libs/bit.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bit/libs/bit.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: stacomirtools
Loading required package: RODBC
Error: package or namespace load failed for ‘RODBC’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RODBC/libs/RODBC.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RODBC/libs/RODBC.so: failed to map segment from shared object
Error: package ‘RODBC’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stagePop’:
 .onLoad failed in loadNamespace() for ‘PBSddesolve’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/PBSddesolve/libs/PBSddesolve.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/PBSddesolve/libs/PBSddesolve.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: pegas
Loading required package: ape
Error: package or namespace load failed for ‘ape’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Error: package ‘ape’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stampr’:
 .onLoad failed in loadNamespace() for ‘deldir’, details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/deldir/libs/deldir.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/deldir/libs/deldir.so: failed to map segment from shared object
Execution halted
Non-standard file/directory found at top level:
  ‘Licence’
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘standardize’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
find.names: no visible global function definition for ‘na.omit’
generate.names: no visible global function definition for ‘na.omit’
standardize.countrynames: no visible global function definition for
  ‘data’
standardize.names: no visible global function definition for ‘na.omit’
Undefined global functions or variables:
  data na.omit
Consider adding
  importFrom("stats", "na.omit")
  importFrom("utils", "data")
to your NAMESPACE file.
Rd file 'standardize.countrynames.Rd':
  \usage lines wider than 90 characters:
     standardize.countrynames(input, input.column = NULL, standard = "default", standard.column = NULL, only.names = FALSE, na.rm = FALSE, s ... [TRUNCATED]

Rd file 'standardize.text.Rd':
  \usage lines wider than 90 characters:
     standardize.text(input, input.column = NULL, standard, standard.column = NULL, regex = NULL, codes = NULL, match = FALSE, only.names =  ... [TRUNCATED]

These lines will be truncated in the PDF manual.
Error in re-building vignettes:
  ...
Error: processing vignette ‘stanmath.Rmd’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stapler’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘staplr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘starma’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘starmie’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Package suggested but not available for checking: ‘starsdata’
Loading this package had a fatal error status code 1
Loading log:
Loading required package: abind
Loading required package: sf
Error: package or namespace load failed for ‘sf’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Error: package ‘sf’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘STARTdesign’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘startR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘STARTS’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Found the following hidden files and directories:
  inst/.Renviron.d
  inst/.Rprofile.d
These were most likely included in error. See section ‘Package
structure’ in the ‘Writing R Extensions’ manual.
Error in re-building vignettes:
  ...
Error: processing vignette ‘startup-intro.md’ failed with diagnostics:
unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/commonmark/libs/commonmark.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/commonmark/libs/commonmark.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘statar’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RGtk2/libs/RGtk2.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RGtk2/libs/RGtk2.so: failed to map segment from shared object
Error: package or namespace load failed for ‘StatCharrms’:
 .onLoad failed in loadNamespace() for ‘RGtk2’, details:
  call: install_all()
  error: This platform is not yet supported by the automatic installer. Please install GTK+ manually, if necessary. See: http://www.gtk.org
In addition: Warning message:
Failed to load RGtk2 dynamic library, attempting to install it. 
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘statcheck’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘statebins’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘states’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rlang/libs/rlang.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘statGraph’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/MASS/libs/MASS.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘stationery’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/foreign/libs/foreign.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/foreign/libs/foreign.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘statip’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/digest/libs/digest.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘StatMeasures’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/libs/datatable.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘statmod’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/statmod/libs/statmod.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/statmod/libs/statmod.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘statnet.common’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/lattice/libs/lattice.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Loading required package: tergm
Loading required package: ergm
Loading required package: network
Error: package or namespace load failed for ‘network’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/network/libs/network.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/network/libs/network.so: failed to map segment from shared object
Error: package ‘network’ could not be loaded
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘staTools’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/VGAM/libs/VGAM.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/VGAM/libs/VGAM.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘statquotes’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/stringi/libs/stringi.so: failed to map segment from shared object
Execution halted
Loading this package had a fatal error status code 1
Loading log:
Error: package or namespace load failed for ‘StatRank’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so’:
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/libs/Rcpp.so: failed to map segment from shared object
Execution halted
Running examples in ‘statsDK-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: fix_time
> ### Title: Fixes the time column of a data set
> ### Aliases: fix_time
> 
> ### ** Examples
> 
> df <- statsDK::retrieve_data("FOLK1A", TID = "*", ALDER = "IALT",
+                              CIVILSTAND = "TOT", lang = "da")
Error in is.url(url) : 
  unable to load shared object '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so':
  /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/curl/libs/curl.so: failed to map segment from shared object
Calls: <Anonymous> ... suppressMessages -> withCallingHandlers -> retrieve_metadata
Execution halted