Running 'autoprint.R' [1s]
  Comparing 'autoprint.Rout' to 'autoprint.Rout.save' ... OK
  Running 'knitr.R' [1s]
  Comparing 'knitr.Rout' to 'knitr.Rout.save' ... OK
  Running 'main.R' [186s]
  Running 'testthat.R' [2s]
Running the tests in 'tests/main.R' failed.
Complete output:
  > require(data.table)
  Loading required package: data.table
  > test.data.table()  # runs the main test suite of 5,000+ tests in /inst/tests/tests.Rraw
  Running D:/temp/RtmpeW4vwh/RLIBS_17b1c7e2cf73/data.table/tests/tests.Rraw 
  Loading required package: bit64
  Loading required package: bit
  Attaching package bit
  package:bit (c) 2008-2012 Jens Oehlschlaegel (GPL-2)
  creators: bit bitwhich
  coercion: as.logical as.integer as.bit as.bitwhich which
  operator: ! & | xor != ==
  querying: print length any all min max range sum summary
  bit access: length<- [ [<- [[ [[<-
  for more help type ?bit
  
  Attaching package: 'bit'
  
  The following object is masked from 'package:data.table':
  
      setattr
  
  The following object is masked from 'package:base':
  
      xor
  
  Attaching package bit64
  package:bit64 (c) 2011-2012 Jens Oehlschlaegel
  creators: integer64 seq :
  coercion: as.integer64 as.vector as.logical as.integer as.double as.character as.bin
  logical operator: ! & | xor != == < <= >= >
  arithmetic operator: + - * / %/% %% ^
  math: sign abs sqrt log log2 log10
  math: floor ceiling trunc round
  querying: is.integer64 is.vector [is.atomic} [length] format print str
  values: is.na is.nan is.finite is.infinite
  aggregation: any all min max range sum prod
  cumulation: diff cummin cummax cumsum cumprod
  access: length<- [ [<- [[ [[<-
  combine: c rep cbind rbind as.data.frame
  WARNING don't use as subscripts
  WARNING semantics differ from integer
  for more help type ?bit64
  
  Attaching package: 'bit64'
  
  The following object is masked from 'package:bit':
  
      still.identical
  
  The following objects are masked from 'package:base':
  
      %in%, :, is.double, match, order, rank
  
  Loading required package: knitr
  Loading required package: nanotime
  Loading required package: chron
  Loading required package: ggplot2
  Loading required package: plyr
  Loading required package: reshape
  
  Attaching package: 'reshape'
  
  The following objects are masked from 'package:plyr':
  
      rename, round_any
  
  The following object is masked from 'package:data.table':
  
      melt
  
  Loading required package: reshape2
  
  Attaching package: 'reshape2'
  
  The following objects are masked from 'package:reshape':
  
      colsplit, melt, recast
  
  The following objects are masked from 'package:data.table':
  
      dcast, melt
  
  Loading required package: testthat
  Loading required package: hexbin
  Loading required package: fastmatch
  Loading required package: nlme
  Loading required package: GenomicRanges
  Loading required package: stats4
  Loading required package: BiocGenerics
  Loading required package: parallel
  
  Attaching package: 'BiocGenerics'
  
  The following objects are masked from 'package:parallel':
  
      clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
      clusterExport, clusterMap, parApply, parCapply, parLapply,
      parLapplyLB, parRapply, parSapply, parSapplyLB
  
  The following objects are masked from 'package:bit64':
  
      match, order, rank
  
  The following objects are masked from 'package:stats':
  
      IQR, mad, sd, var, xtabs
  
  The following objects are masked from 'package:base':
  
      Filter, Find, Map, Position, Reduce, anyDuplicated, append,
      as.data.frame, basename, cbind, colMeans, colSums, colnames,
      dirname, do.call, duplicated, eval, evalq, get, grep, grepl,
      intersect, is.unsorted, lapply, lengths, mapply, match, mget,
      order, paste, pmax, pmax.int, pmin, pmin.int, rank, rbind,
      rowMeans, rowSums, rownames, sapply, setdiff, sort, table, tapply,
      union, unique, unsplit, which, which.max, which.min
  
  Loading required package: S4Vectors
  
  Attaching package: 'S4Vectors'
  
  The following objects are masked from 'package:reshape':
  
      expand, rename
  
  The following object is masked from 'package:plyr':
  
      rename
  
  The following objects are masked from 'package:data.table':
  
      first, second
  
  The following object is masked from 'package:base':
  
      expand.grid
  
  Loading required package: IRanges
  
  Attaching package: 'IRanges'
  
  The following object is masked from 'package:nlme':
  
      collapse
  
  The following object is masked from 'package:plyr':
  
      desc
  
  The following object is masked from 'package:data.table':
  
      shift
  
  The following object is masked from 'package:grDevices':
  
      windows
  
  Loading required package: GenomeInfoDb
  Loading required package: xts
  Loading required package: zoo
  
  Attaching package: 'zoo'
  
  The following objects are masked from 'package:base':
  
      as.Date, as.Date.numeric
  
  
  Attaching package: 'xts'
  
  The following object is masked from 'package:S4Vectors':
  
      first
  
  The following objects are masked from 'package:data.table':
  
      first, last
  
  Loading required package: gdata
  gdata: read.xls support for 'XLS' (Excel 97-2004) files ENABLED.
  
  gdata: Unable to load perl libaries needed by read.xls()
  gdata: to support 'XLSX' (Excel 2007+) files.
  
  gdata: Run the function 'installXLSXsupport()'
  gdata: to automatically download and install the perl
  gdata: libaries needed to support Excel XLS and XLSX formats.
  
  Attaching package: 'gdata'
  
  The following objects are masked from 'package:xts':
  
      first, last
  
  The following object is masked from 'package:GenomicRanges':
  
      trim
  
  The following object is masked from 'package:IRanges':
  
      trim
  
  The following objects are masked from 'package:S4Vectors':
  
      first, first<-
  
  The following object is masked from 'package:BiocGenerics':
  
      combine
  
  The following object is masked from 'package:stats4':
  
      nobs
  
  The following objects are masked from 'package:data.table':
  
      first, last
  
  The following object is masked from 'package:stats':
  
      nobs
  
  The following object is masked from 'package:utils':
  
      object.size
  
  The following object is masked from 'package:base':
  
      startsWith
  
  Loading required package: caret
  Loading required package: lattice
  Loading required package: curl
  Loading required package: plm
  Loading required package: Formula
  
  Attaching package: 'plm'
  
  The following object is masked from 'package:data.table':
  
      between
  
  Loading required package: rmarkdown
  
  Attaching package: 'reshape2'
  
  The following objects are masked _by_ 'package:data.table':
  
      dcast, melt
  
  
  Attaching package: 'reshape'
  
  The following objects are masked _by_ 'package:S4Vectors':
  
      expand, rename
  
  The following objects are masked _by_ 'package:plyr':
  
      rename, round_any
  
  The following object is masked _by_ 'package:data.table':
  
      melt
  
  The following objects are masked _by_ 'package:reshape2':
  
      colsplit, melt, recast
  
  Don't know how to automatically pick scale for object of type ITime. Defaulting to continuous.
  Don't know how to automatically pick scale for object of type ITime. Defaulting to continuous.
  Test 1288.1 didn't produce correct error :
  > rbindlist(ll, use.names = TRUE) 
  Expected error: 'use.names=TRUE but no item of input list has any names.'
  Observed error: 'cannot set attribute on a symbol'
  Test 1373 ran without errors but failed check that x equals y:
  > x = grepl("NAM\\(1\\)", out) 
  [1] FALSE
  > y = TRUE 
  [1] TRUE
  1 element mismatch
  Test 1543.3 ran without errors but failed check that x equals y:
  > x = ans1 
    A X total.x A.y total.y
  1 e 3    TRUE   9   FALSE
  2 f 8    TRUE   2   FALSE
  3 g 4    TRUE   1   FALSE
  4 h 6    TRUE   8   FALSE
  5 i 7    TRUE   5   FALSE
  6 j 9    TRUE   3   FALSE
  > y = ans2 
    A X total.x A total.y
  1 e 3    TRUE 9   FALSE
  2 f 8    TRUE 2   FALSE
  3 g 4    TRUE 1   FALSE
  4 h 6    TRUE 8   FALSE
  5 i 7    TRUE 5   FALSE
  6 j 9    TRUE 3   FALSE
  Test 1641.008 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1642.004 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1642.005 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1642.007 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1642.01 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1642.012 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1642.035 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1642.036 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1642.038 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1642.04 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1642.057 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1642.058 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1642.06 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1642.063 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1642.085 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1642.087 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1642.09 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1644.002 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1644.003 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1644.005 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1644.006 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1644.007 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1644.008 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1644.009 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1644.022 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1644.028 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1644.031 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1644.032 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1644.033 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1644.045 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1644.046 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1644.052 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1644.053 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1644.069 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1644.076 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1644.087 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1645.001 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1645.004 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1645.006 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1646.003 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1646.008 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1646.009 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1646.026 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1646.03 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1646.032 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1646.034 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1646.053 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1646.075 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1646.08 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1646.091 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1648.004 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1648.005 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1648.032 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1648.033 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1648.036 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1648.049 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1648.052 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1648.053 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1648.054 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1650.001 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1650.014 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1650.022 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1650.024 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1650.026 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1650.033 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1650.035 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1650.037 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1650.038 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1650.048 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1651.006 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1652.001 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1652.004 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1652.014 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1652.029 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1652.036 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1652.051 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1652.052 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1652.067 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1652.078 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1652.08 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  Test 1652.087 Error in length(ans$indices) : 
    (converted from warning) type 31 is unimplemented in 'type2str'
  
  
  Running test id 1696     
  Error in eval(exprs[i], envir) : 
    84 errors out of 5744 (lastID=1751, endian==little, sizeof(long double)==12, sizeof(pointer)==4) in inst/tests/tests.Rraw on Tue Apr 17 17:31:08 2018. Search tests.Rraw for test numbers: 1288.1, 1373, 1543.3, 1641.008, 1642.004, 1642.005, 1642.007, 1642.01, 1642.012, 1642.035, 1642.036, 1642.038, 1642.04, 1642.057, 1642.058, 1642.06, 1642.063, 1642.085, 1642.087, 1642.09, 1644.002, 1644.003, 1644.005, 1644.006, 1644.007, 1644.008, 1644.009, 1644.022, 1644.028, 1644.031, 1644.032, 1644.033, 1644.045, 1644.046, 1644.052, 1644.053, 1644.069, 1644.076, 1644.087, 1645.001, 1645.004, 1645.006, 1646.003, 1646.008, 1646.009, 1646.026, 1646.03, 1646.032, 1646.034, 1646.053, 1646.075, 1646.08, 1646.091, 1648.004, 1648.005, 1648.032, 1648.033, 1648.036, 1648.049, 1648.052, 1648.053, 1648.054, 1650.001, 1650.014, 1650.022, 1650.024, 1650.026, 1650.033, 1650.035, 1650.037, 1650.038, 1650.048, 1651.006, 1652.001, 1652.004, 1652.014, 1652.029, 1652.036, 1652.051, 1652.052, 1652.067, 1652.07
  Calls: test.data.table -> sys.source -> eval -> eval
  Execution halted