Running ‘bootstrap.R’ [1s/2s]
Running the tests in ‘tests/bootstrap.R’ failed.
Complete output:
  > if(require("RUnit", quietly=TRUE)) {
  +   library(ncdf4.helpers)
  +   library(proj4)
  + 
  +   ## Run all the tests
  +   wd <- getwd()
  +   testsuite <- defineTestSuite("ncdf4.helpers", dirs=wd, testFileRegexp = "^test_.+.R$", testFuncRegexp = "^ncdf4.helpers.test.+")
  +   ncdf4.helpers.test.result <- runTestSuite(testsuite, useOwnErrorHandler=F)
  +   printTextProtocol(ncdf4.helpers.test.result)
  +   stopifnot(ncdf4.helpers.test.result$ncdf4.helpers$nFail == 0 && ncdf4.helpers.test.result$ncdf4.helpers$nErr == 0)    
  + }
  
  
  Executing test function ncdf4.helpers.test.nc.get.climatology.bounds.var.list  ...  done successfully.
  
  
  
  Executing test function ncdf4.helpers.test.nc.get.compress.dims  ...  done successfully.
  
  
  
  Executing test function ncdf4.helpers.test.nc.get.coordinate.axes  ...  done successfully.
  
  
  
  Executing test function ncdf4.helpers.test.nc.get.dim.axes  ...  done successfully.
  
  
  
  Executing test function ncdf4.helpers.test.nc.get.dim.axes.from.names  ...  done successfully.
  
  
  
  Executing test function ncdf4.helpers.test.nc.get.dim.bounds.var.list  ...  done successfully.
  
  
  
  Executing test function ncdf4.helpers.test.nc.get.dim.for.axis  ...  done successfully.
  
  
  
  Executing test function ncdf4.helpers.test.nc.get.dim.names  ...  done successfully.
  
  
  
  Executing test function ncdf4.helpers.test.nc.get.proj4.string  ...  done successfully.
  
  
  
  Executing test function ncdf4.helpers.test.nc.get.time.series  ... Timing stopped at: 0.017 0 0.056
  Error in checkEquals(nc.get.time.series(f1), correct.data.ts.test1) : 
    Attributes: < Names: 1 string mismatch >
  Attributes: < Length mismatch: comparison on first 1 components >
  Attributes: < Component 1: Modes: numeric, character >
  Attributes: < Component 1: target is numeric, current is character >
  target is array, current is PCICt
  
   done successfully.
  
  
  
  Executing test function ncdf4.helpers.test.nc.get.var.subset.by.axes  ...  done successfully.
  
  
  
  Executing test function ncdf4.helpers.test.nc.get.variable.list  ...  done successfully.
  
  
  
  Executing test function ncdf4.helpers.test.write.functions  ...  done successfully.
  
  
  
  Executing test function ncdf4.helpers.test.get.f.step.size  ...  done successfully.
  
  
  
  Executing test function ncdf4.helpers.test.nc.is.regular.dimension  ...  done successfully.
  
  
  
  Executing test function ncdf4.helpers.test.nc.make.time.bounds  ... Timing stopped at: 0 0 0
  Error in UseMethod("as.PCICt") : 
    no applicable method for 'as.PCICt' applied to an object of class "character"
   done successfully.
  
  RUNIT TEST PROTOCOL -- Tue Mar 27 08:59:18 2018 
  *********************************************** 
  Number of test functions: 16 
  Number of errors: 1 
  Number of failures: 1 
  
   
  1 Test Suite : 
  ncdf4.helpers - 16 test functions, 1 error, 1 failure
  FAILURE in ncdf4.helpers.test.nc.get.time.series: Error in checkEquals(nc.get.time.series(f1), correct.data.ts.test1) : 
    Attributes: < Names: 1 string mismatch >
  Attributes: < Length mismatch: comparison on first 1 components >
  Attributes: < Component 1: Modes: numeric, character >
  Attributes: < Component 1: target is numeric, current is character >
  target is array, current is PCICt
  
  ERROR in ncdf4.helpers.test.nc.make.time.bounds: Error in UseMethod("as.PCICt") : 
    no applicable method for 'as.PCICt' applied to an object of class "character"
  
  
  
  Details 
  *************************** 
  Test Suite: ncdf4.helpers 
  Test function regexp: ^ncdf4.helpers.test.+ 
  Test file regexp: ^test_.+.R$ 
  Involved directory: 
  /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/ncdf4.helpers.Rcheck/tests 
  --------------------------- 
  Test file: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/ncdf4.helpers.Rcheck/tests/test_file_functions.R 
  ncdf4.helpers.test.nc.get.climatology.bounds.var.list: (1 checks) ... OK (0.02 seconds)
  ncdf4.helpers.test.nc.get.compress.dims: (1 checks) ... OK (0.01 seconds)
  ncdf4.helpers.test.nc.get.coordinate.axes: (1 checks) ... OK (0.02 seconds)
  ncdf4.helpers.test.nc.get.dim.axes: (2 checks) ... OK (0.01 seconds)
  ncdf4.helpers.test.nc.get.dim.axes.from.names: (2 checks) ... OK (0.01 seconds)
  ncdf4.helpers.test.nc.get.dim.bounds.var.list: (1 checks) ... OK (0.01 seconds)
  ncdf4.helpers.test.nc.get.dim.for.axis: (1 checks) ... OK (0.01 seconds)
  ncdf4.helpers.test.nc.get.dim.names: (2 checks) ... OK (0.02 seconds)
  ncdf4.helpers.test.nc.get.proj4.string: (3 checks) ... OK (0.01 seconds)
  ncdf4.helpers.test.nc.get.time.series: FAILURE !! (check number 1)
  Error in checkEquals(nc.get.time.series(f1), correct.data.ts.test1) : 
    Attributes: < Names: 1 string mismatch >
  Attributes: < Length mismatch: comparison on first 1 components >
  Attributes: < Component 1: Modes: numeric, character >
  Attributes: < Component 1: target is numeric, current is character >
  target is array, current is PCICt
  
  ncdf4.helpers.test.nc.get.var.subset.by.axes: (1 checks) ... OK (0.03 seconds)
  ncdf4.helpers.test.nc.get.variable.list: (2 checks) ... OK (0.02 seconds)
  ncdf4.helpers.test.write.functions: (2 checks) ... OK (0.03 seconds)
  --------------------------- 
  Test file: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/ncdf4.helpers.Rcheck/tests/test_simple_functions.R 
  ncdf4.helpers.test.get.f.step.size: (2 checks) ... OK (0 seconds)
  ncdf4.helpers.test.nc.is.regular.dimension: (2 checks) ... OK (0 seconds)
  ncdf4.helpers.test.nc.make.time.bounds: ERROR !! 
  Error in UseMethod("as.PCICt") : 
    no applicable method for 'as.PCICt' applied to an object of class "character"
  Error: ncdf4.helpers.test.result$ncdf4.helpers$nFail == 0 && ncdf4.helpers.test.result$ncdf4.helpers$nErr ==  .... is not TRUE
  Execution halted