* installing *source* package 'spCP' ...
** package 'spCP' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: 'g++.exe (GCC) 13.3.0'
make[1]: Entering directory '/d/temp/2024_12_08_01_50_01_8405/Rtmpaom8XV/R.INSTALL2e1643f61141c/spCP/src'
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c CovarianceFunctions.cpp -o CovarianceFunctions.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c DIAG_Conversion.cpp -o DIAG_Conversion.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c DIAG_GetLogLik.cpp -o DIAG_GetLogLik.o
DIAG_GetLogLik.cpp: In function 'double GetLogLikMean(Rcpp::List, Rcpp::List)':
DIAG_GetLogLik.cpp:53:10: warning: 'LogLikMean' may be used uninitialized [-Wmaybe-uninitialized]
53 | return LogLikMean;
| ^~~~~~~~~~
DIAG_GetLogLik.cpp:47:10: note: 'LogLikMean' was declared here
47 | double LogLikMean;
| ^~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c DIAG_NormalLogLik.cpp -o DIAG_NormalLogLik.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c DIAG_ProbitLogLik.cpp -o DIAG_ProbitLogLik.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c DIAG_SamplePPD.cpp -o DIAG_SamplePPD.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c DIAG_TobitLogLik.cpp -o DIAG_TobitLogLik.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c DistributionFunctions.cpp -o DistributionFunctions.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c MCMC_Conversion.cpp -o MCMC_Conversion.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c MCMC_Samplers.cpp -o MCMC_Samplers.o
MCMC_Samplers.cpp: In function 'std::pair<para, metrobj> SampleEta(datobj, para, metrobj)':
MCMC_Samplers.cpp:611:18: warning: 'ThetaLocProposal' may be used uninitialized [-Wmaybe-uninitialized]
611 | Theta(Loc) = ThetaLocProposal;
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
MCMC_Samplers.cpp:547:42: note: 'ThetaLocProposal' was declared here
547 | double TuningSD, LogR, EtaLocProposal, ThetaLocProposal;
| ^~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c MCMC_Utilities.cpp -o MCMC_Utilities.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c MCMC_spCP.cpp -o MCMC_spCP.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c PRED_Conversion.cpp -o PRED_Conversion.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c PRED_PredictFuture.cpp -o PRED_PredictFuture.o
PRED_PredictFuture.cpp: In function 'arma::cube PredictFuture(Rcpp::List, Rcpp::List, int)':
PRED_PredictFuture.cpp:44:29: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'unsigned int'} and 'int' [-Wsign-compare]
44 | for (arma::uword i = 0; i < NKeep; i++) {
| ~~^~~~~~~
PRED_PredictFuture.cpp:55:31: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'unsigned int'} and 'int' [-Wsign-compare]
55 | for (arma::uword t = 0; t < NNewTimes; t++) {
| ~~^~~~~~~~~~~
PRED_PredictFuture.cpp:56:33: warning: comparison of integer expressions of different signedness: 'arma::uword' {aka 'unsigned int'} and 'int' [-Wsign-compare]
56 | for (arma::uword s = 0; s < M; s++) {
| ~~^~~
PRED_PredictFuture.cpp:63:76: warning: 'Sigma' may be used uninitialized [-Wmaybe-uninitialized]
63 | YPred.subcube(i, s, t, i, s, t) = fmax(0, arma::as_scalar(rnormRcpp(1, Mu, Sigma)));
| ~~~~~~~~~^~~~~~~~~~~~~~
PRED_PredictFuture.cpp:41:27: note: 'Sigma' was declared here
41 | double NewTime, CP, Mu, Sigma;
| ^~~~~
PRED_PredictFuture.cpp:63:76: warning: 'Mu' may be used uninitialized [-Wmaybe-uninitialized]
63 | YPred.subcube(i, s, t, i, s, t) = fmax(0, arma::as_scalar(rnormRcpp(1, Mu, Sigma)));
| ~~~~~~~~~^~~~~~~~~~~~~~
PRED_PredictFuture.cpp:41:23: note: 'Mu' was declared here
41 | double NewTime, CP, Mu, Sigma;
| ^~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c Play.cpp -o Play.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c UtilityFunctions.cpp -o UtilityFunctions.o
g++ -std=gnu++17 -shared -s -static-libgcc -o spCP.dll tmp.def CovarianceFunctions.o DIAG_Conversion.o DIAG_GetLogLik.o DIAG_NormalLogLik.o DIAG_ProbitLogLik.o DIAG_SamplePPD.o DIAG_TobitLogLik.o DistributionFunctions.o MCMC_Conversion.o MCMC_Samplers.o MCMC_Utilities.o MCMC_spCP.o PRED_Conversion.o PRED_PredictFuture.o Play.o RcppExports.o UtilityFunctions.o -LD:/RCompile/recent/R-4.4.2/bin/x64 -lRlapack -LD:/RCompile/recent/R-4.4.2/bin/x64 -lRblas -lgfortran -lm -lquadmath -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.4.2/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2024_12_08_01_50_01_8405/Rtmpaom8XV/R.INSTALL2e1643f61141c/spCP/src'
make[1]: Entering directory '/d/temp/2024_12_08_01_50_01_8405/Rtmpaom8XV/R.INSTALL2e1643f61141c/spCP/src'
make[1]: Leaving directory '/d/temp/2024_12_08_01_50_01_8405/Rtmpaom8XV/R.INSTALL2e1643f61141c/spCP/src'
installing to d:/Rcompile/CRANpkg/lib/4.4/00LOCK-spCP/00new/spCP/libs/x64
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'spCP' as spCP_1.3.zip
* DONE (spCP)