• using R version 4.4.2 (2024-10-31 ucrt)
• using platform: x86_64-w64-mingw32
• R was compiled by     gcc.exe (GCC) 13.3.0     GNU Fortran (GCC) 13.3.0
• running under: Windows Server 2022 x64 (build 20348)
• using session charset: UTF-8
• checking for file 'rNeighborGWAS/DESCRIPTION' ... OK
• this is package 'rNeighborGWAS' version '1.2.4'
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking whether package 'rNeighborGWAS' can be installed ... OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking 'build' directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [2s] OK
• checking whether the package can be loaded with stated dependencies ... [2s] OK
• checking whether the package can be unloaded cleanly ... [2s] OK
• checking whether the namespace can be loaded with stated dependencies ... [2s] OK
• checking whether the namespace can be unloaded cleanly ... [2s] OK
• checking loading without being on the library search path ... [2s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [6s] OK
• checking Rd files ... [1s] NOTE checkRd: (-1) calc_PVEnei.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) calc_PVEnei.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) calc_PVEnei.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) calc_PVEnei.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) gaston2neiGWAS.Rd:15: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) gaston2neiGWAS.Rd:16: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) gaston2neiGWAS.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) neiGWAS.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) neiGWAS.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) neiGWAS.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) nei_lm.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) nei_lm.Rd:36: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) nei_lm.Rd:37: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) nei_lm.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) nei_lmm.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) nei_lmm.Rd:36: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) nei_lmm.Rd:37: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) nei_lmm.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) qtl_pheno_simu.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) qtl_pheno_simu.Rd:36: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) qtl_pheno_simu.Rd:37: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) qtl_pheno_simu.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) qtl_pheno_simu.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) qtl_pheno_simu.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) qtl_pheno_simu.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) qtl_pheno_simu.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from 'inst/doc' ... OK
• checking files in 'vignettes' ... OK
• checking examples ... [5s] OK
• checking for unstated dependencies in 'tests' ... OK
• checking tests ... [59s] OK   Running 'testthat.R' [58s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [25s] OK
• checking PDF version of manual ... [21s] OK
• checking HTML version of manual ... [3s] OK
• DONE

Status: 1 NOTE