* installing *source* package 'qcluster' ...
** package 'qcluster' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: 'gcc.exe (GCC) 13.3.0'
make[1]: Entering directory '/d/temp/2024_12_08_01_50_01_8405/RtmpQzZxVG/R.INSTALLccbcc516ef7/qcluster/src'
gcc -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c Rsample_from.c -o Rsample_from.o
gcc -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c alloc_utils.c -o alloc_utils.o
gcc -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c cluster_to_triplets.c -o cluster_to_triplets.o
gcc -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ecm.c -o ecm.o
ecm.c: In function 'ECM':
ecm.c:90:9: warning: 'iter' may be used uninitialized [-Wmaybe-uninitialized]
90 | int iter = 0;
| ^~~~
gcc -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ecm_winit.c -o ecm_winit.o
gcc -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c gss.c -o gss.o
gcc -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c helper_score_smd.c -o helper_score_smd.o
gcc -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c init.c -o init.o
gcc -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c kmedians.c -o kmedians.o
kmedians.c: In function 'kmedians':
kmedians.c:137:5: warning: 'assigned_cluster' may be used uninitialized [-Wmaybe-uninitialized]
137 | free(assigned_cluster);
| ^~~~~~~~~~~~~~~~~~~~~~
kmedians.c:90:10: note: 'assigned_cluster' was declared here
90 | int *assigned_cluster = malloc(N * sizeof(int)); /* Store cluster memberships */
| ^~~~~~~~~~~~~~~~
kmedians.c:142:12: warning: 'cost[0]' may be used uninitialized [-Wmaybe-uninitialized]
142 | if (!(cost[0] < INFINITY))
| ^
kmedians.c:103:12: note: 'cost[0]' was declared here
103 | double cost[2];
| ^~~~
gcc -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c quickselect.c -o quickselect.o
gcc -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c score_hard.c -o score_hard.o
gcc -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c score_hard_cluster.c -o score_hard_cluster.o
gcc -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c score_smooth.c -o score_smooth.o
gcc -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c score_smooth_cluster.c -o score_smooth_cluster.o
gcc -shared -s -static-libgcc -o qcluster.dll tmp.def Rsample_from.o alloc_utils.o cluster_to_triplets.o ecm.o ecm_winit.o gss.o helper_score_smd.o init.o kmedians.o quickselect.o score_hard.o score_hard_cluster.o score_smooth.o score_smooth_cluster.o -LD:/RCompile/recent/R-4.4.2/bin/x64 -lRlapack -LD:/RCompile/recent/R-4.4.2/bin/x64 -lRblas -lgfortran -lm -lquadmath -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.4.2/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2024_12_08_01_50_01_8405/RtmpQzZxVG/R.INSTALLccbcc516ef7/qcluster/src'
make[1]: Entering directory '/d/temp/2024_12_08_01_50_01_8405/RtmpQzZxVG/R.INSTALLccbcc516ef7/qcluster/src'
make[1]: Leaving directory '/d/temp/2024_12_08_01_50_01_8405/RtmpQzZxVG/R.INSTALLccbcc516ef7/qcluster/src'
installing to d:/Rcompile/CRANpkg/lib/4.4/00LOCK-qcluster/00new/qcluster/libs/x64
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'qcluster' as qcluster_1.2.zip
* DONE (qcluster)