* installing *source* package 'ncvreg' ...
** package 'ncvreg' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: 'gcc.exe (GCC) 13.3.0'
make[1]: Entering directory '/d/temp/2024_12_08_01_50_01_8405/RtmpSGswJh/R.INSTALLc1544beb4005/ncvreg/src'
gcc -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c cox-dh.c -o cox-dh.o
gcc -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c gaussian.c -o gaussian.o
gaussian.c: In function 'cdfit_gaussian':
gaussian.c:118:56: warning: 'cutoff' may be used uninitialized [-Wmaybe-uninitialized]
118 | for (int j=0; j<p; j++) if (fabs(z[j]) > (cutoff * alpha * m[j])) e2[j] = 1;
| ~~~~~~~^~~~~~~
gaussian.c:76:10: note: 'cutoff' was declared here
76 | double cutoff, l1, l2;
| ^~~~~~
gcc -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c glm.c -o glm.o
glm.c: In function 'cdfit_glm':
glm.c:152:56: warning: 'cutoff' may be used uninitialized [-Wmaybe-uninitialized]
152 | for (int j=0; j<p; j++) if (fabs(z[j]) > (cutoff * alpha * m[j])) e2[j] = 1;
| ~~~~~~~^~~~~~~
glm.c:91:42: note: 'cutoff' was declared here
91 | double xwr, xwx, mu, u, v, max_change, cutoff, l1, l2, shift, si;
| ^~~~~~
glm.c:200:24: warning: 'si' may be used uninitialized [-Wmaybe-uninitialized]
200 | max_change = fabs(si)*xwx/n;
| ^~~~~~~~
glm.c:91:65: note: 'si' was declared here
91 | double xwr, xwx, mu, u, v, max_change, cutoff, l1, l2, shift, si;
| ^~
gcc -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c maxprod.c -o maxprod.o
gcc -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c mfdr_binomial.c -o mfdr_binomial.o
gcc -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c mfdr_cox.c -o mfdr_cox.o
gcc -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c mfdr_gaussian.c -o mfdr_gaussian.o
gcc -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ncvreg_init.c -o ncvreg_init.o
gcc -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c rawfit_gaussian.c -o rawfit_gaussian.o
gcc -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c standardize.c -o standardize.o
gcc -shared -s -static-libgcc -o ncvreg.dll tmp.def cox-dh.o gaussian.o glm.o maxprod.o mfdr_binomial.o mfdr_cox.o mfdr_gaussian.o ncvreg_init.o rawfit_gaussian.o standardize.o -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.4.2/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2024_12_08_01_50_01_8405/RtmpSGswJh/R.INSTALLc1544beb4005/ncvreg/src'
make[1]: Entering directory '/d/temp/2024_12_08_01_50_01_8405/RtmpSGswJh/R.INSTALLc1544beb4005/ncvreg/src'
make[1]: Leaving directory '/d/temp/2024_12_08_01_50_01_8405/RtmpSGswJh/R.INSTALLc1544beb4005/ncvreg/src'
installing to d:/Rcompile/CRANpkg/lib/4.4/00LOCK-ncvreg/00new/ncvreg/libs/x64
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'ncvreg' as ncvreg_3.14.3.zip
* DONE (ncvreg)