* installing *source* package 'agcounts' ...
** package 'agcounts' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: 'g++.exe (GCC) 13.3.0'
make[1]: Entering directory '/d/temp/2024_12_21_01_50_00_6285/Rtmpic5jmD/R.INSTALL12e4066fca09/agcounts/src'
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"     -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"     -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c gcalibrate.cpp -o gcalibrate.o
gcalibrate.cpp: In function 'double calcRes(Rcpp::NumericMatrix, Rcpp::NumericMatrix, Rcpp::DoubleVector)':
gcalibrate.cpp:68:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
   68 |   for(int i = 0; i < m.n_cols; i++){
      |                  ~~^~~~~~~~~~
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"     -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c resample_helpers.cpp -o resample_helpers.o
g++ -std=gnu++17 -shared -s -static-libgcc -o agcounts.dll tmp.def RcppExports.o gcalibrate.o resample_helpers.o -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.4.2/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2024_12_21_01_50_00_6285/Rtmpic5jmD/R.INSTALL12e4066fca09/agcounts/src'
make[1]: Entering directory '/d/temp/2024_12_21_01_50_00_6285/Rtmpic5jmD/R.INSTALL12e4066fca09/agcounts/src'
make[1]: Leaving directory '/d/temp/2024_12_21_01_50_00_6285/Rtmpic5jmD/R.INSTALL12e4066fca09/agcounts/src'
installing to d:/Rcompile/CRANpkg/lib/4.4/00LOCK-agcounts/00new/agcounts/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'agcounts' as agcounts_0.6.6.zip
* DONE (agcounts)