* installing *source* package 'SFS' ...
** package 'SFS' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: 'g++.exe (GCC) 13.3.0'
using C++11
make[1]: Entering directory '/d/temp/2024_12_08_01_50_01_8405/RtmpYlPUxd/R.INSTALL6a20779f84/SFS/src'
g++ -std=gnu++11 -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c SFSMatrix.cpp -o SFSMatrix.o
In file included from SFSMatrix.cpp:26:
SFSMatrix.h:48: warning: "assert" redefined
48 | #define assert(x) sfs_assert_thrower((x),__FILE__, __LINE__)
|
In file included from d:\rtools44\x86_64-w64-mingw32.static.posix\lib\gcc\x86_64-w64-mingw32.static.posix\13.3.0\include\c++\cassert:44,
from D:/RCompile/CRANpkg/lib/4.4/Rcpp/include/Rcpp/utils/tinyformat/tinyformat.h:137,
from D:/RCompile/CRANpkg/lib/4.4/Rcpp/include/Rcpp/utils/tinyformat.h:40,
from D:/RCompile/CRANpkg/lib/4.4/Rcpp/include/RcppCommon.h:74,
from D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:25,
from D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include/RcppArmadillo.h:29,
from SFSMatrix.h:36:
d:\rtools44\x86_64-w64-mingw32.static.posix\include\assert.h:42: note: this is the location of the previous definition
42 | #define assert(_Expression) ((void)0)
|
g++ -std=gnu++11 -I"D:/RCompile/recent/R-4.4.2/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c rcpp_sfs.cpp -o rcpp_sfs.o
In file included from rcpp_sfs.cpp:26:
SFSMatrix.h:48: warning: "assert" redefined
48 | #define assert(x) sfs_assert_thrower((x),__FILE__, __LINE__)
|
In file included from d:\rtools44\x86_64-w64-mingw32.static.posix\lib\gcc\x86_64-w64-mingw32.static.posix\13.3.0\include\c++\cassert:44,
from D:/RCompile/CRANpkg/lib/4.4/Rcpp/include/Rcpp/utils/tinyformat/tinyformat.h:137,
from D:/RCompile/CRANpkg/lib/4.4/Rcpp/include/Rcpp/utils/tinyformat.h:40,
from D:/RCompile/CRANpkg/lib/4.4/Rcpp/include/RcppCommon.h:74,
from D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:25,
from D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include/RcppArmadillo.h:29,
from rcpp_sfs.cpp:24:
d:\rtools44\x86_64-w64-mingw32.static.posix\include\assert.h:42: note: this is the location of the previous definition
42 | #define assert(_Expression) ((void)0)
|
g++ -shared -s -static-libgcc -o SFS.dll tmp.def RcppExports.o SFSMatrix.o rcpp_sfs.o -LD:/RCompile/recent/R-4.4.2/bin/x64 -lRlapack -LD:/RCompile/recent/R-4.4.2/bin/x64 -lRblas -lgfortran -lm -lquadmath -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.4.2/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2024_12_08_01_50_01_8405/RtmpYlPUxd/R.INSTALL6a20779f84/SFS/src'
make[1]: Entering directory '/d/temp/2024_12_08_01_50_01_8405/RtmpYlPUxd/R.INSTALL6a20779f84/SFS/src'
make[1]: Leaving directory '/d/temp/2024_12_08_01_50_01_8405/RtmpYlPUxd/R.INSTALL6a20779f84/SFS/src'
installing to d:/Rcompile/CRANpkg/lib/4.4/00LOCK-SFS/00new/SFS/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'SFS' as SFS_0.1.4.zip
* DONE (SFS)