• using R version 4.4.2 (2024-10-31 ucrt)
• using platform: x86_64-w64-mingw32
• R was compiled by     gcc.exe (GCC) 13.3.0     GNU Fortran (GCC) 13.3.0
• running under: Windows Server 2022 x64 (build 20348)
• using session charset: UTF-8
• checking for file 'PubChemR/DESCRIPTION' ... OK
• checking extension type ... Package
• this is package 'PubChemR' version '2.1.3'
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking whether package 'PubChemR' can be installed ... OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking 'build' directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s] OK
• checking whether the package can be loaded with stated dependencies ... [1s] OK
• checking whether the package can be unloaded cleanly ... [1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s] OK
• checking whether the namespace can be unloaded cleanly ... [1s] OK
• checking loading without being on the library search path ... [1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [6s] OK
• checking Rd files ... [1s] OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from 'inst/doc' ... OK
• checking files in 'vignettes' ... OK
• checking examples ... [30s] OK
• checking for unstated dependencies in 'tests' ... OK
• checking tests ... [65s] OK   Running 'testthat.R' [64s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [257s] ERROR Error(s) in re-building vignettes: --- re-building 'Enhancing_Chemical_Data_Access_with_PubChemR.Rmd' using rmarkdown --- finished re-building 'Enhancing_Chemical_Data_Access_with_PubChemR.Rmd' --- re-building 'Exploring_Chemical_Data_with_PubChemR.Rmd' using rmarkdown --- finished re-building 'Exploring_Chemical_Data_with_PubChemR.Rmd' --- re-building 'Working_with_PubChemR_to_Access_Chemical_Data.Rmd' using rmarkdown Quitting from lines 1039-1048 [download_jsson] (Working_with_PubChemR_to_Access_Chemical_Data.Rmd) Error: processing vignette 'Working_with_PubChemR_to_Access_Chemical_Data.Rmd' failed with diagnostics: Timeout was reached [pubchem.ncbi.nlm.nih.gov]: Failed to connect to pubchem.ncbi.nlm.nih.gov port 443 after 10002 ms: Timeout was reached --- failed re-building 'Working_with_PubChemR_to_Access_Chemical_Data.Rmd' SUMMARY: processing the following file failed:   'Working_with_PubChemR_to_Access_Chemical_Data.Rmd' Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... [30s] OK
• checking HTML version of manual ... [5s] OK
• DONE

Status: 1 ERROR