* using log directory 'd:/Rcompile/CRANpkg/local/4.4/GPCsign.Rcheck' * using R version 4.4.2 (2024-10-31 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.3.0 GNU Fortran (GCC) 13.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'GPCsign/DESCRIPTION' ... OK * this is package 'GPCsign' version '0.1.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'GPCsign' can be installed ... OK See 'https://www.r-project.org/nosvn/R.check/r-release-windows-x86_64/GPCsign-00install.html' for details. * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [2s] OK * checking whether the package can be loaded with stated dependencies ... [2s] OK * checking whether the package can be unloaded cleanly ... [2s] OK * checking whether the namespace can be loaded with stated dependencies ... [2s] OK * checking whether the namespace can be unloaded cleanly ... [2s] OK * checking loading without being on the library search path ... [2s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [6s] OK * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... [12s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [98s] ERROR Running 'testthat.R' [98s] Running the tests in 'tests/testthat.R' failed. Complete output: > ## load dependencies > library(testthat) > > ## test package > test_check('GPCsign') Loading required package: GPCsign [ FAIL 6 | WARN 0 | SKIP 0 | PASS 9 ] â•â• Failed tests â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â• ── Failure ('test-GPCmodel.R:32:5'): Check GPC coef.m and coef.cov ───────────── ... && ... is not TRUE `actual`: FALSE `expected`: TRUE ── Failure ('test-GPCmodel.R:43:3'): Check GPC logLik ────────────────────────── max(abs((model@logLik - logLik)/logLik)) < precision is not TRUE `actual`: FALSE `expected`: TRUE ── Failure ('test-GPCmodel.R:32:5'): Check GPC coef.m and coef.cov ───────────── ... && ... is not TRUE `actual`: FALSE `expected`: TRUE ── Failure ('test-GPCmodel.R:43:3'): Check GPC logLik ────────────────────────── max(abs((model@logLik - logLik)/logLik)) < precision is not TRUE `actual`: FALSE `expected`: TRUE ── Failure ('test-GPCmodel.R:39:3'): Check GPC Z_obs ─────────────────────────── max(abs((model@Z_obs - Z_obs)/Z_obs)) < precision is not TRUE `actual`: FALSE `expected`: TRUE ── Failure ('test-GPCmodel.R:219:1'): Check GPC coef.m and coef.cov ──────────── (abs((m8@coef.m - coef.m)) < 1e-04) && ... is not TRUE `actual`: FALSE `expected`: TRUE [ FAIL 6 | WARN 0 | SKIP 0 | PASS 9 ] Error: Test failures Execution halted * checking PDF version of manual ... [20s] OK * checking HTML version of manual ... [2s] OK * DONE Status: 1 ERROR