- using R version 4.4.0 (2024-04-24)
- using platform: x86_64-apple-darwin20
- R was compiled by
Apple clang version 14.0.0 (clang-1400.0.29.202)
GNU Fortran (GCC) 12.2.0
- running under: macOS Ventura 13.3.1
- using session charset: UTF-8
- checking for file ‘tramvs/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘tramvs’ version ‘0.0-4’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘tramvs’ can be installed ... [5s/5s] OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [1s/1s] OK
- checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the package can be unloaded cleanly ... [1s/1s] OK
- checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
- checking loading without being on the library search path ... [1s/1s] OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [4s/4s] OK
- checking Rd files ... [0s/0s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking sizes of PDF files under ‘inst/doc’ ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [3s/3s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [80s/99s] OK
Running ‘test-continuous.R’ [3s/3s]
Comparing ‘test-continuous.Rout’ to ‘test-continuous.Rout.save’ ...158,161d157
<
< Thank you for using abess! To acknowledge our work, please cite the package:
<
< Zhu J, Wang X, Hu L, Huang J, Jiang K, Zhang Y, Lin S, Zhu J (2022). 'abess: A Fast Best Subset Selection Library in Python and R.' Journal of Machine Learning Research, 23(202), 1-7. https://www.jmlr.org/papers/v23/21-1060.html.
Running ‘test-count.R’ [8s/8s]
Comparing ‘test-count.Rout’ to ‘test-count.Rout.save’ ... OK
Running ‘test-mandatory.R’ [9s/10s]
Comparing ‘test-mandatory.Rout’ to ‘test-mandatory.Rout.save’ ... OK
Running ‘test-ordinal.R’ [2s/3s]
Comparing ‘test-ordinal.Rout’ to ‘test-ordinal.Rout.save’ ... OK
Running ‘test-shiftscale.R’ [4s/4s]
Comparing ‘test-shiftscale.Rout’ to ‘test-shiftscale.Rout.save’ ... OK
Running ‘test-survival.R’ [41s/54s]
Comparing ‘test-survival.Rout’ to ‘test-survival.Rout.save’ ...33,36d32
<
< Thank you for using abess! To acknowledge our work, please cite the package:
<
< Zhu J, Wang X, Hu L, Huang J, Jiang K, Zhang Y, Lin S, Zhu J (2022). 'abess: A Fast Best Subset Selection Library in Python and R.' Journal of Machine Learning Research, 23(202), 1-7. https://www.jmlr.org/papers/v23/21-1060.html.
Running ‘test-weibull.R’ [12s/17s]
Comparing ‘test-weibull.Rout’ to ‘test-weibull.Rout.save’ ... OK
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [78s/98s] WARNING
Error(s) in re-building vignettes:
...
--- re-building ‘tramvs.Rnw’ using knitr
Error: processing vignette 'tramvs.Rnw' failed with diagnostics:
Running 'texi2dvi' on 'tramvs.tex' failed.
LaTeX errors:
! Undefined control sequence.
l.257 \hlkwd{args}\hldef
{(abess_tram)}
?
! Emergency stop.
! Emergency stop.
l.257
End of file on the terminal!
! ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘tramvs.Rnw’
SUMMARY: processing the following file failed:
‘tramvs.Rnw’
Error: Vignette re-building failed.
Execution halted
- checking PDF version of manual ... [6s/6s] OK
- DONE
Status: 1 WARNING
- using check arguments '--no-clean-on-error '