* using log directory ‘/Volumes/Builds/packages/big-sur-x86_64/results/4.4/spatPomp.Rcheck’
* using R version 4.4.1 (2024-06-14)
* using platform: x86_64-apple-darwin20
* R was compiled by
    Apple clang version 14.0.0 (clang-1400.0.29.202)
    GNU Fortran (GCC) 12.2.0
* running under: macOS Ventura 13.3.1
* using session charset: UTF-8
* checking for file ‘spatPomp/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘spatPomp’ version ‘1.0.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘spatPomp’ can be installed ... [12s/11s] OK
See 'https://www.r-project.org/nosvn/R.check/r-release-macos-x86_64/spatPomp-00install.html' for details.
* used C compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
* used SDK: ‘MacOSX11.3.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [1s/1s] OK
* checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
* checking whether the package can be unloaded cleanly ... [1s/1s] OK
* checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
* checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
* checking loading without being on the library search path ... [1s/1s] OK
* checking whether startup messages can be suppressed ... [1s/1s] OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [9s/13s] OK
* checking Rd files ... [1s/1s] OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... [0s/0s] OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking compiled code ... OK
* checking sizes of PDF files under ‘inst/doc’ ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [1s/1s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [47s/63s] OK
  Running ‘abf.R’ [0s/0s]
  Running ‘abfir.R’ [0s/0s]
  Running ‘arma_benchmark.R’ [0s/0s]
  Running ‘bm.R’ [12s/16s]
  Comparing ‘bm.Rout’ to ‘bm.Rout.save’ ... OK
  Running ‘bm2.R’ [6s/9s]
  Comparing ‘bm2.Rout’ to ‘bm2.Rout.save’ ... OK
  Running ‘bpfilter.R’ [0s/0s]
  Running ‘concat.R’ [0s/0s]
  Running ‘enkf.R’ [0s/0s]
  Running ‘gbm.R’ [2s/3s]
  Comparing ‘gbm.Rout’ to ‘gbm.Rout.save’ ... OK
  Running ‘girf.R’ [0s/0s]
  Running ‘he10.R’ [4s/5s]
  Comparing ‘he10.Rout’ to ‘he10.Rout.save’ ... OK
  Running ‘ibpf.R’ [0s/0s]
  Running ‘ienkf.R’ [0s/0s]
  Running ‘igirf.R’ [0s/0s]
  Running ‘iter_filter.R’ [1s/1s]
  Comparing ‘iter_filter.Rout’ to ‘iter_filter.Rout.save’ ... OK
  Running ‘iubf.R’ [0s/0s]
  Running ‘lorenz.R’ [2s/4s]
  Comparing ‘lorenz.Rout’ to ‘lorenz.Rout.save’ ... OK
  Running ‘measles.R’ [8s/10s]
  Comparing ‘measles.Rout’ to ‘measles.Rout.save’ ... OK
  Running ‘measles2.R’ [6s/10s]
  Comparing ‘measles2.Rout’ to ‘measles2.Rout.save’ ... OK
  Running ‘param_formats.R’ [1s/1s]
  Comparing ‘param_formats.Rout’ to ‘param_formats.Rout.save’ ... OK
  Running ‘pfilter.R’ [0s/0s]
  Running ‘plot.R’ [0s/0s]
  Running ‘simulate.R’ [0s/0s]
  Running ‘spatPomp.R’ [0s/0s]
  Running ‘undefined.R’ [0s/0s]
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [13s/13s] OK
* checking PDF version of manual ... [6s/6s] OK
* DONE
Status: OK
* using check arguments '--no-clean-on-error '

* elapsed time (check, wall clock): 5:18