* installing *source* package ‘rxode2ll’ ...
** package ‘rxode2ll’ successfully unpacked and MD5 sums checked
** using staged installation
--------[begin src/Makevars]--------
# -*- mode: makefile-gmake -*-
BH=/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include
RCPP=/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include
EG=/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include
SH=-isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/src'
CXX_STD = CXX17
################################################################################
## Package library flags.
PKG_LIBS = $(LAPACK_LIBS) $(BLAS_LIBS) $(FLIBS) $(SHLIB_OPENMP_CXXFLAGS) -L'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/lib/' -Wl,-rpath,'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/lib/' -ltbb -ltbbmalloc
# Release options
PKG_CFLAGS = -D_isrxode2parse_
PKG_CXXFLAGS = $(SHLIB_OPENMP_CXXFLAGS) -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"$(BH)" -isystem"$(EG)" $(SH) -isystem"$(RCPP)"
--------[end src/Makevars]--------
** libs
using C compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
using C++17
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -fPIC -falign-functions=64 -Wall -g -O2 -c init.c -o init.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikBeta.cpp -o llikBeta.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikBinom.cpp -o llikBinom.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikCauchy.cpp -o llikCauchy.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikChisq.cpp -o llikChisq.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikExp.cpp -o llikExp.o
In file included from llikCauchy.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:8:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/chainable_object.hpp:6:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/typedefs.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/Eigen_NumTraits.hpp:5:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
/opt/R/x86_64/include/boost/lexical_cast.hpp:40:1: warning: C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84. [-W#pragma-messages]
BOOST_PRAGMA_MESSAGE("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
/opt/R/x86_64/include/boost/config/pragma_message.hpp:24:34: note: expanded from macro 'BOOST_PRAGMA_MESSAGE'
# define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x)))
^
<scratch space>:366:2: note: expanded from here
message("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
In file included from llikChisq.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:8:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/chainable_object.hpp:6:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/typedefs.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/Eigen_NumTraits.hpp:5:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
/opt/R/x86_64/include/boost/lexical_cast.hpp:40:1: warning: C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84. [-W#pragma-messages]
BOOST_PRAGMA_MESSAGE("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
/opt/R/x86_64/include/boost/config/pragma_message.hpp:24:34: note: expanded from macro 'BOOST_PRAGMA_MESSAGE'
# define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x)))
^
<scratch space>:366:2: note: expanded from here
message("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
In file included from llikBinom.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:8:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/chainable_object.hpp:6:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/typedefs.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/Eigen_NumTraits.hpp:5:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
/opt/R/x86_64/include/boost/lexical_cast.hpp:40:1: warning: C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84. [-W#pragma-messages]
In file included from BOOST_PRAGMA_MESSAGE("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
/opt/R/x86_64/include/boost/config/pragma_message.hpp:24:34: note: expanded from macro 'BOOST_PRAGMA_MESSAGE'
# define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x)))
^
<scratch space>:366:2: note: expanded from here
message("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
llikBeta.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:8:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/chainable_object.hpp:6:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/typedefs.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/Eigen_NumTraits.hpp:5:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
/opt/R/x86_64/include/boost/lexical_cast.hpp:40:1: warning: C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84. [-W#pragma-messages]
BOOST_PRAGMA_MESSAGE("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
/opt/R/x86_64/include/boost/config/pragma_message.hpp:24:34: note: expanded from macro 'BOOST_PRAGMA_MESSAGE'
# define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x)))
^
<scratch space>:366:2: note: expanded from here
message("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
In file included from llikExp.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:8:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/chainable_object.hpp:6:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/typedefs.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/Eigen_NumTraits.hpp:5:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
/opt/R/x86_64/include/boost/lexical_cast.hpp:40:1: warning: C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84. [-W#pragma-messages]
BOOST_PRAGMA_MESSAGE("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
/opt/R/x86_64/include/boost/config/pragma_message.hpp:24:34: note: expanded from macro 'BOOST_PRAGMA_MESSAGE'
# define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x)))
^
<scratch space>:366:2: note: expanded from here
message("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
In file included from llikCauchy.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
^
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
class ops_partials_edge;
^~~~~
struct
In file included from llikChisq.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
^
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
class ops_partials_edge;
^~~~~
struct
In file included from llikBeta.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
^
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
class ops_partials_edge;
^~~~~
struct
In file included from llikExp.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
^
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
class ops_partials_edge;
^~~~~
struct
In file included from llikBinom.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
^
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
class ops_partials_edge;
^~~~~
struct
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikF.cpp -o llikF.o
In file included from llikF.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:8:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/chainable_object.hpp:6:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/typedefs.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/Eigen_NumTraits.hpp:5:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
/opt/R/x86_64/include/boost/lexical_cast.hpp:40:1: warning: C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84. [-W#pragma-messages]
BOOST_PRAGMA_MESSAGE("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
/opt/R/x86_64/include/boost/config/pragma_message.hpp:24:34: note: expanded from macro 'BOOST_PRAGMA_MESSAGE'
# define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x)))
^
<scratch space>:366:2: note: expanded from here
message("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
In file included from llikF.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
^
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
class ops_partials_edge;
^~~~~
struct
2 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikGamma.cpp -o llikGamma.o
2 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikGeom.cpp -o llikGeom.o
2 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikNbinom.cpp -o llikNbinom.o
2 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikNbinom2.cpp -o llikNbinom2.o
2 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikNorm.cpp -o llikNorm.o
In file included from llikGamma.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:8:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/chainable_object.hpp:6:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/typedefs.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/Eigen_NumTraits.hpp:5:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
/opt/R/x86_64/include/boost/lexical_cast.hpp:40:1: warning: C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84. [-W#pragma-messages]
BOOST_PRAGMA_MESSAGE("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
/opt/R/x86_64/include/boost/config/pragma_message.hpp:24:34: note: expanded from macro 'BOOST_PRAGMA_MESSAGE'
# define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x)))
^
<scratch space>:366:2: note: expanded from here
message("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
In file included from llikGeom.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:8:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/chainable_object.hpp:6:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/typedefs.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/Eigen_NumTraits.hpp:5:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
/opt/R/x86_64/include/boost/lexical_cast.hpp:40:1: warning: C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84. [-W#pragma-messages]
BOOST_PRAGMA_MESSAGE("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
/opt/R/x86_64/include/boost/config/pragma_message.hpp:24:34: note: expanded from macro 'BOOST_PRAGMA_MESSAGE'
# define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x)))
^
<scratch space>:366:2: note: expanded from here
message("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
In file included from llikNbinom.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:8:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/chainable_object.hpp:6:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/typedefs.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/Eigen_NumTraits.hpp:5:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
/opt/R/x86_64/include/boost/lexical_cast.hpp:40:1: warning: C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84. [-W#pragma-messages]
BOOST_PRAGMA_MESSAGE("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
/opt/R/x86_64/include/boost/config/pragma_message.hpp:24:34: note: expanded from macro 'BOOST_PRAGMA_MESSAGE'
# define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x)))
^
<scratch space>:366:2: note: expanded from here
message("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
In file included from llikNbinom2.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:8:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/chainable_object.hpp:6:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/typedefs.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/Eigen_NumTraits.hpp:5:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
/opt/R/x86_64/include/boost/lexical_cast.hpp:40:1: warning: C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84. [-W#pragma-messages]
BOOST_PRAGMA_MESSAGE("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
/opt/R/x86_64/include/boost/config/pragma_message.hpp:24:34: note: expanded from macro 'BOOST_PRAGMA_MESSAGE'
# define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x)))
^
<scratch space>:366:2: note: expanded from here
message("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
In file included from llikNorm.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:8:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/chainable_object.hpp:6:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/typedefs.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/Eigen_NumTraits.hpp:5:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
/opt/R/x86_64/include/boost/lexical_cast.hpp:40:1: warning: C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84. [-W#pragma-messages]
BOOST_PRAGMA_MESSAGE("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
/opt/R/x86_64/include/boost/config/pragma_message.hpp:24:34: note: expanded from macro 'BOOST_PRAGMA_MESSAGE'
# define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x)))
^
<scratch space>:366:2: note: expanded from here
message("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
In file included from llikGamma.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
^
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
class ops_partials_edge;
^~~~~
struct
In file included from llikNbinom.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
^
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
class ops_partials_edge;
^~~~~
struct
In file included from llikGeom.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
^
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
class ops_partials_edge;
^~~~~
struct
In file included from llikNbinom2.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
^
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
class ops_partials_edge;
^~~~~
struct
In file included from llikNorm.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
^
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
class ops_partials_edge;
^~~~~
struct
2 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikPois.cpp -o llikPois.o
In file included from llikPois.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:8:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/chainable_object.hpp:6:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/typedefs.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/Eigen_NumTraits.hpp:5:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
/opt/R/x86_64/include/boost/lexical_cast.hpp:40:1: warning: C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84. [-W#pragma-messages]
BOOST_PRAGMA_MESSAGE("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
/opt/R/x86_64/include/boost/config/pragma_message.hpp:24:34: note: expanded from macro 'BOOST_PRAGMA_MESSAGE'
# define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x)))
^
<scratch space>:366:2: note: expanded from here
message("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
In file included from llikPois.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
^
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
class ops_partials_edge;
^~~~~
struct
2 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikT.cpp -o llikT.o
2 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikUnif.cpp -o llikUnif.o
2 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikWeibull.cpp -o llikWeibull.o
2 warnings generated.
2 warnings generated.
In file included from llikT.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:8:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/chainable_object.hpp:6:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/typedefs.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/Eigen_NumTraits.hpp:5:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
/opt/R/x86_64/include/boost/lexical_cast.hpp:40:1: warning: C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84. [-W#pragma-messages]
BOOST_PRAGMA_MESSAGE("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
/opt/R/x86_64/include/boost/config/pragma_message.hpp:24:34: note: expanded from macro 'BOOST_PRAGMA_MESSAGE'
# define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x)))
^
<scratch space>:366:2: note: expanded from here
message("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
In file included from llikUnif.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:8:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/chainable_object.hpp:6:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/typedefs.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/Eigen_NumTraits.hpp:5:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
/opt/R/x86_64/include/boost/lexical_cast.hpp:40:1: warning: C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84. [-W#pragma-messages]
BOOST_PRAGMA_MESSAGE("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
/opt/R/x86_64/include/boost/config/pragma_message.hpp:24:34: note: expanded from macro 'BOOST_PRAGMA_MESSAGE'
# define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x)))
^
<scratch space>:366:2: note: expanded from here
message("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
In file included from llikWeibull.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:8:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/chainable_object.hpp:6:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/typedefs.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/core/Eigen_NumTraits.hpp:5:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
/opt/R/x86_64/include/boost/lexical_cast.hpp:40:1: warning: C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84. [-W#pragma-messages]
BOOST_PRAGMA_MESSAGE("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
/opt/R/x86_64/include/boost/config/pragma_message.hpp:24:34: note: expanded from macro 'BOOST_PRAGMA_MESSAGE'
# define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x)))
^
<scratch space>:366:2: note: expanded from here
message("C++03 support is deprecated in Boost.LexicalCast 1.82 and will be removed in Boost.LexicalCast 1.84.")
^
In file included from llikT.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
^
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
class ops_partials_edge;
^~~~~
struct
In file included from llikUnif.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
^
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
class ops_partials_edge;
^~~~~
struct
In file included from llikWeibull.cpp:1:
In file included from ./llik2.h:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math.hpp:19:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
^
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
class ops_partials_edge;
^~~~~
struct
2 warnings generated.
2 warnings generated.
2 warnings generated.
2 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o rxode2ll.so RcppExports.o init.o llikBeta.o llikBinom.o llikCauchy.o llikChisq.o llikExp.o llikF.o llikGamma.o llikGeom.o llikNbinom.o llikNbinom2.o llikNorm.o llikPois.o llikT.o llikUnif.o llikWeibull.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -L/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/lib/ -Wl,-rpath,/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/lib/ -ltbb -ltbbmalloc -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.4/rxode2ll.Rcheck/00LOCK-rxode2ll/00new/rxode2ll/libs
** generating debug symbols (dSYM)
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rxode2ll)