- using R version 4.4.0 (2024-04-24)
- using platform: x86_64-apple-darwin20
- R was compiled by
Apple clang version 14.0.0 (clang-1400.0.29.202)
GNU Fortran (GCC) 12.2.0
- running under: macOS Ventura 13.3.1
- using session charset: UTF-8
- checking for file ‘pez/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘pez’ version ‘1.2-4’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘pez’ can be installed ... [11s/11s] OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [2s/2s] OK
- checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
- checking whether the package can be unloaded cleanly ... [2s/2s] OK
- checking whether the namespace can be loaded with stated dependencies ... [2s/2s] OK
- checking whether the namespace can be unloaded cleanly ... [2s/2s] OK
- checking loading without being on the library search path ... [2s/2s] OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [11s/11s] OK
- checking Rd files ... [1s/1s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/0s] OK
- checking data for ASCII and uncompressed saves ... OK
- checking sizes of PDF files under ‘inst/doc’ ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [10s/11s] OK
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [37s/39s] WARNING
Error(s) in re-building vignettes:
--- re-building ‘pez-intro.Rnw’ using knitr
Error: processing vignette 'pez-intro.Rnw' failed with diagnostics:
Running 'texi2dvi' on 'pez-intro.tex' failed.
LaTeX errors:
! Undefined control sequence.
l.124 \hlkwd{library}\hldef
{(pez)}
?
! Emergency stop.
! Emergency stop.
l.124
End of file on the terminal!
! ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘pez-intro.Rnw’
--- re-building ‘pez-pglmm-overview.Rnw’ using knitr
Error: processing vignette 'pez-pglmm-overview.Rnw' failed with diagnostics:
Running 'texi2dvi' on 'pez-pglmm-overview.tex' failed.
LaTeX errors:
! Undefined control sequence.
l.108 \hldef
{nspp} \hlkwb{<-} \hlnum{15}
?
! Emergency stop.
! Emergency stop.
l.108
End of file on the terminal!
! ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘pez-pglmm-overview.Rnw’
SUMMARY: processing the following files failed:
‘pez-intro.Rnw’ ‘pez-pglmm-overview.Rnw’
Error: Vignette re-building failed.
Execution halted
- checking PDF version of manual ... [7s/8s] OK
- DONE
Status: 1 WARNING
- using check arguments '--no-clean-on-error '