* installing *source* package ‘pcaL1’ ...
** package ‘pcaL1’ successfully unpacked and MD5 sums checked
** using staged installation
checking for gcc... clang -arch x86_64
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether clang -arch x86_64 accepts -g... yes
checking for clang -arch x86_64 option to enable C11 features... none needed
checking how to run the C preprocessor... clang -arch x86_64 -E
checking for pkg-config... /opt/R/x86_64/bin/pkg-config
configure: set compile and link flags according to pkg-config
configure: compile flags are -I/opt/R/x86_64/include/coin
configure: link flags are -L/opt/R/x86_64/lib -lClpSolver -lClp -lc++ -lCoinUtils -lbz2 -lz -framework Accelerate -lm
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for stdbool.h... yes
checking for Clp_C_Interface.h... yes
checking for library containing Clp_newModel... none required
checking for library containing Clp_setRowName... none required
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
using SDK: ‘MacOSX11.3.sdk’
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c init.c -o init.o
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c l1pca.c -o l1pca.o
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c l1pca_R.c -o l1pca_R.o
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c l1pcahp.c -o l1pcahp.o
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c l1pcahp_R.c -o l1pcahp_R.o
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c l1pcastar.c -o l1pcastar.o
l1pcastar.c:20:7: warning: variable 'numprojdim' set but not used [-Wunused-but-set-variable]
int numprojdim = probleminfo->numprojdim;
^
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c l1pcastar_R.c -o l1pcastar_R.o
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c l1projection.c -o l1projection.o
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c l1projection_R.c -o l1projection_R.o
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c pcal1.c -o pcal1.o
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c pcal1_R.c -o pcal1_R.o
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c pcalp.c -o pcalp.o
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c pcalp_R.c -o pcalp_R.o
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c sharpel1pca.c -o sharpel1pca.o
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c sharpel1pca_R.c -o sharpel1pca_R.o
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c sharpel1rs.c -o sharpel1rs.o
1 warning generated.
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c sharpel1rs_R.c -o sharpel1rs_R.o
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c sparsel1pca.c -o sparsel1pca.o
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c sparsel1pca_R.c -o sparsel1pca_R.o
clang -arch x86_64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o pcaL1.so init.o l1pca.o l1pca_R.o l1pcahp.o l1pcahp_R.o l1pcastar.o l1pcastar_R.o l1projection.o l1projection_R.o pcal1.o pcal1_R.o pcalp.o pcalp_R.o sharpel1pca.o sharpel1pca_R.o sharpel1rs.o sharpel1rs_R.o sparsel1pca.o sparsel1pca_R.o -L/opt/R/x86_64/lib -lClpSolver -lClp -lc++ -lCoinUtils -lbz2 -lz -framework Accelerate -lm -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.4/pcaL1.Rcheck/00LOCK-pcaL1/00new/pcaL1/libs
** generating debug symbols (dSYM)
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (pcaL1)