• using R version 4.4.1 (2024-06-14)
• using platform: x86_64-apple-darwin20
• R was compiled by     Apple clang version 14.0.0 (clang-1400.0.29.202)     GNU Fortran (GCC) 12.2.0
• running under: macOS Ventura 13.3.1
• using session charset: UTF-8
• checking for file ‘datacutr/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘datacutr’ version ‘0.2.2’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘datacutr’ can be installed ... [4s/6s] OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the package can be unloaded cleanly ... [1s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/2s] OK
• checking loading without being on the library search path ... [1s/2s] OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [3s/3s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [2s/2s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [5s/6s] ERROR   Running ‘testthat.R’ [5s/5s] Running the tests in ‘tests/testthat.R’ failed. Complete output:   > library(testthat)   > library(datacutr)   >   > test_check("datacutr")   [1] "At least 1 patient with missing datacut date."   [1] "At least 1 patient with missing datacut date, all records will be kept."   [1] "At least 1 patient with missing datacut date, all records will be kept."   [ FAIL 4 | WARN 0 | SKIP 0 | PASS 55 ]      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Error ('test-process_cut.R:180:3'): Test that Correct .Rmd file is ran successfully when read_out = TRUE ──   Error: pandoc version 1.12.3 or higher is required and was not found (see the help page ?rmarkdown::pandoc_available).   Backtrace:       ▆    1. └─datacutr::process_cut(...) at test-process_cut.R:180:3    2. └─datacutr::read_out(...)    3. └─rmarkdown::render(...)    4. └─rmarkdown::pandoc_available(required_pandoc, error = TRUE)    5. └─rmarkdown:::stop2(paste(msg, collapse = " "))   ── Error ('test-process_cut.R:227:3'): Test that Correct .Rmd file is ran successfully when read_out = TRUE ──   Error: pandoc version 1.12.3 or higher is required and was not found (see the help page ?rmarkdown::pandoc_available).   Backtrace:       ▆    1. └─datacutr::process_cut(...) at test-process_cut.R:227:3    2. └─datacutr::read_out(...)    3. └─rmarkdown::render(...)    4. └─rmarkdown::pandoc_available(required_pandoc, error = TRUE)    5. └─rmarkdown:::stop2(paste(msg, collapse = " "))   ── Error ('test-read_out.R:81:3'): Correct .Rmd file is run successfully when fields contain correct data inputs ──   Error: pandoc version 1.12.3 or higher is required and was not found (see the help page ?rmarkdown::pandoc_available).   Backtrace:       ▆    1. └─datacutr::read_out(...) at test-read_out.R:81:3    2. └─rmarkdown::render(...)    3. └─rmarkdown::pandoc_available(required_pandoc, error = TRUE)    4. └─rmarkdown:::stop2(paste(msg, collapse = " "))   ── Error ('test-read_out.R:99:3'): Correct .Rmd file is ran successfully when fields are empty ──   Error: pandoc version 1.12.3 or higher is required and was not found (see the help page ?rmarkdown::pandoc_available).   Backtrace:       ▆    1. └─datacutr::read_out(out_path = temp_dir) at test-read_out.R:99:3    2. └─rmarkdown::render(...)    3. └─rmarkdown::pandoc_available(required_pandoc, error = TRUE)    4. └─rmarkdown:::stop2(paste(msg, collapse = " "))      [ FAIL 4 | WARN 0 | SKIP 0 | PASS 55 ]   Error: Test failures   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [28s/39s] OK
• checking PDF version of manual ... [6s/8s] OK
• DONE Status: 1 ERROR
• using check arguments '--no-clean-on-error '