Check results for 'bcfrailphdv'

using R version 4.4.0 (2024-04-24)
using platform: x86_64-apple-darwin20
R was compiled by Apple clang version 14.0.0 (clang-1400.0.29.202) GNU Fortran (GCC) 12.2.0
running under: macOS Ventura 13.3.1
using session charset: UTF-8
checking for file ‘bcfrailphdv/DESCRIPTION’ ... OK
checking extension type ... Package
this is package ‘bcfrailphdv’ version ‘0.1.1’
package encoding: UTF-8
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checking whether package ‘bcfrailphdv’ can be installed ... [14s/17s] OK See the install log for details.
checking installed package size ... OK
checking package directory ... OK
checking DESCRIPTION meta-information ... OK
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checking R code for possible problems ... [21s/42s] OK
checking Rd files ... [0s/0s] NOTE checkRd: (-1) bcfraildv.Rd:35: Lost braces; missing escapes or markup? 35 | \item \code{coefficients} - {A vector of estimated Covariate coefficients.} | ^ checkRd: (-1) bcfraildv.Rd:36: Lost braces; missing escapes or markup? 36 | \item \code{frailparest} - {A vector of estimated Frailty parameters i.e. frailty variance and correlation.} | ^ checkRd: (-1) bcfraildv.Rd:37: Lost braces; missing escapes or markup? 37 | \item \code{stderr}-{A vector containing the Standard error of the Estimated parameters both covariate coefficients and frailty parameters.} | ^ checkRd: (-1) bcfraildv.Rd:42: Lost braces; missing escapes or markup? 42 | \item \code{X}-{Matrix of observed covariates.} | ^ checkRd: (-1) bcfraildv.Rd:43: Lost braces; missing escapes or markup? 43 | \item \code{time}-{the observed survival time.} | ^ checkRd: (-1) bcfraildv.Rd:44: Lost braces; missing escapes or markup? 44 | \item \code{censor}-{censoring indicator.} | ^ checkRd: (-1) bcfraildv.Rd:45: Lost braces; missing escapes or markup? 45 | \item \code{resid}-{the martingale residuals.} | ^ checkRd: (-1) bcfraildv.Rd:46: Lost braces; missing escapes or markup? 46 | \item \code{lin.prid}-{the vector of linear predictors.} | ^ checkRd: (-1) bcfraildv.Rd:47: Lost braces; missing escapes or markup? 47 | \item \code{frail}-{estimated Frailty values.} | ^ checkRd: (-1) bcfraildv.Rd:48: Lost braces; missing escapes or markup? 48 | \item \code{iteration}-{Number of outer iterations.} | ^ checkRd: (-1) bcfraildv.Rd:49: Lost braces; missing escapes or markup? 49 | \item \code{e.time}-{the vector of unique event times.} | ^ checkRd: (-1) bcfraildv.Rd:50: Lost braces; missing escapes or markup? 50 | \item \code{n.event}- {the number of events at each of the unique event times.} | ^ checkRd: (-1) bcfraildv.Rd:51: Lost braces; missing escapes or markup? 51 | \item \code{convergence}-{an indicator, 0 if converge and 1 otherwise.} | ^ checkRd: (-1) bcfrailpar.Rd:41: Lost braces; missing escapes or markup? 41 | \item \code{coefficients} - {A vector of estimated Covariate coefficients.} | ^ checkRd: (-1) bcfrailpar.Rd:42: Lost braces; missing escapes or markup? 42 | \item \code{frailparest} - {A vector of estimated Frailty parameters i.e. frailty variance and correlation.} | ^ checkRd: (-1) bcfrailpar.Rd:43: Lost braces; missing escapes or markup? 43 | \item \code{basehazpar} - {A vector of estimated baseline hazard parameters i.e. scale and shape.} | ^ checkRd: (-1) bcfrailpar.Rd:44: Lost braces; missing escapes or markup? 44 | \item \code{stderr}-{A vector containing the Standard errors of the Estimated parameters with the order of frailty parameters,baseline hazard parameters and covariate coefficients.} | ^ checkRd: (-1) bcfrailpar.Rd:45: Lost braces; missing escapes or markup? 45 | \item \code{vcov}- {Variance Covariance matrix of the Estimated parameters.} | ^ checkRd: (-1) bcfrailpar.Rd:46: Lost braces; missing escapes or markup? 46 | \item \code{loglik}-{Log likelihood of the model.} | ^ checkRd: (-1) bcfrailpar.Rd:47: Lost braces; missing escapes or markup? 47 | \item \code{AIC}-{AIC of the model.} | ^ checkRd: (-1) bcfrailpar.Rd:48: Lost braces; missing escapes or markup? 48 | \item \code{BIC}-{BIC of the model.} | ^ checkRd: (-1) bcfrailpar.Rd:49: Lost braces 49 | \item \code{iterations}-{Number of outer iterations.See\link{constrOptim} for further.} | ^ checkRd: (-1) bcfrailpar.Rd:50: Lost braces 50 | \item \code{convergence}-{An indicator of convergence. See\link{constrOptim} for further.} | ^ checkRd: (-1) simbcfraildv.Rd:52: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) simbcfraildv.Rd:54: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) simbcfraildv.Rd:56: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) simbcfraildv.Rd:58: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) simbcfraildv.Rd:60: Lost braces in \itemize; \value handles \item{}{} directly
checking Rd metadata ... OK
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checking PDF version of manual ... [7s/8s] OK
DONE Status: 1 NOTE
using check arguments '--no-clean-on-error '