* installing *source* package ‘Phase123’ ... ** package ‘Phase123’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using SDK: ‘MacOSX11.3.sdk’ clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c PHASE123CODE.cpp -o PHASE123CODE.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o In file included from PHASE123CODE.cpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:29: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include/armadillo:26: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include/armadillo_bits/config.hpp:326:11: warning: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed [-W#pragma-messages] #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed") ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include/armadillo_bits/config.hpp:331:13: warning: INFO: suggest to use ARMA_WARN_LEVEL option instead [-W#pragma-messages] #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead") ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include/armadillo_bits/config.hpp:334:11: warning: INFO: see the documentation for details [-W#pragma-messages] #pragma message ("INFO: see the documentation for details") ^ PHASE123CODE.cpp:106:7: warning: unused variable 'm' [-Wunused-variable] int m=0; ^ PHASE123CODE.cpp:625:7: warning: unused variable 'Count' [-Wunused-variable] int Count=0; ^ PHASE123CODE.cpp:635:7: warning: unused variable 'nREP' [-Wunused-variable] int nREP=0; ^ PHASE123CODE.cpp:678:10: warning: unused variable 'min1' [-Wunused-variable] double min1=0; ^ PHASE123CODE.cpp:1517:7: warning: unused variable 'Count' [-Wunused-variable] int Count=0; ^ PHASE123CODE.cpp:1527:7: warning: unused variable 'nREP' [-Wunused-variable] int nREP=0; ^ PHASE123CODE.cpp:1550:7: warning: unused variable 'm' [-Wunused-variable] int m=0; ^ PHASE123CODE.cpp:1567:7: warning: variable 'STOPPED' set but not used [-Wunused-but-set-variable] int STOPPED=0; ^ PHASE123CODE.cpp:1568:7: warning: unused variable 'i' [-Wunused-variable] int i=0; ^ PHASE123CODE.cpp:1570:10: warning: unused variable 'min1' [-Wunused-variable] double min1=0; ^ PHASE123CODE.cpp:1574:7: warning: unused variable 'nRep' [-Wunused-variable] int nRep=0; ^ PHASE123CODE.cpp:2001:7: warning: unused variable 'Count' [-Wunused-variable] int Count=0; ^ PHASE123CODE.cpp:2011:7: warning: unused variable 'nREP' [-Wunused-variable] int nREP=0; ^ PHASE123CODE.cpp:2034:7: warning: unused variable 'm' [-Wunused-variable] int m=0; ^ PHASE123CODE.cpp:2051:7: warning: variable 'STOPPED' set but not used [-Wunused-but-set-variable] int STOPPED=0; ^ PHASE123CODE.cpp:2052:7: warning: unused variable 'i' [-Wunused-variable] int i=0; ^ PHASE123CODE.cpp:2054:10: warning: unused variable 'min1' [-Wunused-variable] double min1=0; ^ PHASE123CODE.cpp:2058:7: warning: unused variable 'nRep' [-Wunused-variable] int nRep=0; ^ PHASE123CODE.cpp:2492:7: warning: unused variable 'b' [-Wunused-variable] int b=0; ^ PHASE123CODE.cpp:2496:7: warning: unused variable 'B1' [-Wunused-variable] int B1=B; ^ PHASE123CODE.cpp:3540:7: warning: unused variable 'm' [-Wunused-variable] int m=0; ^ 24 warnings generated. clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o Phase123.so PHASE123CODE.o RcppExports.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.4/Phase123.Rcheck/00LOCK-Phase123/00new/Phase123/libs ** generating debug symbols (dSYM) ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Phase123)