Install log for 'FLSSS'

* installing *source* package ‘FLSSS’ ...
** package ‘FLSSS’ successfully unpacked and MD5 sums checked
** using staged installation
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether clang++ -arch x86_64 -std=gnu++17 accepts -g... yes
checking how to run the C++ preprocessor... clang++ -arch x86_64 -std=gnu++17 -E
checking for gcc... clang -arch x86_64
checking whether we are using the GNU C compiler... yes
checking whether clang -arch x86_64 accepts -g... yes
checking for clang -arch x86_64 option to accept ISO C89... none needed
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether clang++ -arch x86_64 -std=gnu++17 accepts -g... (cached) yes
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... rm: conftest.dSYM: is a directory
rm: conftest.dSYM: is a directory
yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking gmp.h usability... yes
checking gmp.h presence... yes
checking for gmp.h... yes
checking for __gmpz_init in -lgmp... yes
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include   -I. -DGMP -falign-functions=64 -Wall -g -O2 -DR_BUILD -fPIC  -falign-functions=64 -Wall -g -O2   -c BaB01kp.cpp -o BaB01kp.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include   -I. -DGMP -falign-functions=64 -Wall -g -O2 -DR_BUILD -fPIC  -falign-functions=64 -Wall -g -O2   -c BaBgapMulthreadKPs.cpp -o BaBgapMulthreadKPs.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include   -I. -DGMP -falign-functions=64 -Wall -g -O2 -DR_BUILD -fPIC  -falign-functions=64 -Wall -g -O2   -c BaBgapMulthreadNodes.cpp -o BaBgapMulthreadNodes.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include   -I. -DGMP -falign-functions=64 -Wall -g -O2 -DR_BUILD -fPIC  -falign-functions=64 -Wall -g -O2   -c DP01kp.cpp -o DP01kp.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include   -I. -DGMP -falign-functions=64 -Wall -g -O2 -DR_BUILD -fPIC  -falign-functions=64 -Wall -g -O2   -c DPgapMultithreadKPs.cpp -o DPgapMultithreadKPs.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include   -I. -DGMP -falign-functions=64 -Wall -g -O2 -DR_BUILD -fPIC  -falign-functions=64 -Wall -g -O2   -c DPgapMultithreadNodes.cpp -o DPgapMultithreadNodes.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include   -I. -DGMP -falign-functions=64 -Wall -g -O2 -DR_BUILD -fPIC  -falign-functions=64 -Wall -g -O2   -c GAP.cpp -o GAP.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include   -I. -DGMP -falign-functions=64 -Wall -g -O2 -DR_BUILD -fPIC  -falign-functions=64 -Wall -g -O2   -c GAgap.cpp -o GAgap.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include   -I. -DGMP -falign-functions=64 -Wall -g -O2 -DR_BUILD -fPIC  -falign-functions=64 -Wall -g -O2   -c Gknapsack.cpp -o Gknapsack.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include   -I. -DGMP -falign-functions=64 -Wall -g -O2 -DR_BUILD -fPIC  -falign-functions=64 -Wall -g -O2   -c RcppExports.cpp -o RcppExports.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include   -I. -DGMP -falign-functions=64 -Wall -g -O2 -DR_BUILD -fPIC  -falign-functions=64 -Wall -g -O2   -c findBoundInterface.cpp -o findBoundInterface.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include   -I. -DGMP -falign-functions=64 -Wall -g -O2 -DR_BUILD -fPIC  -falign-functions=64 -Wall -g -O2   -c flsss.cpp -o flsss.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include   -I. -DGMP -falign-functions=64 -Wall -g -O2 -DR_BUILD -fPIC  -falign-functions=64 -Wall -g -O2   -c flsssVariableTree.cpp -o flsssVariableTree.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include   -I. -DGMP -falign-functions=64 -Wall -g -O2 -DR_BUILD -fPIC  -falign-functions=64 -Wall -g -O2   -c mflsss.cpp -o mflsss.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include   -I. -DGMP -falign-functions=64 -Wall -g -O2 -DR_BUILD -fPIC  -falign-functions=64 -Wall -g -O2   -c mflsssArb.cpp -o mflsssArb.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include   -I. -DGMP -falign-functions=64 -Wall -g -O2 -DR_BUILD -fPIC  -falign-functions=64 -Wall -g -O2   -c mflsssComoPar.cpp -o mflsssComoPar.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include   -I. -DGMP -falign-functions=64 -Wall -g -O2 -DR_BUILD -fPIC  -falign-functions=64 -Wall -g -O2   -c mflsssDecomp.cpp -o mflsssDecomp.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include   -I. -DGMP -falign-functions=64 -Wall -g -O2 -DR_BUILD -fPIC  -falign-functions=64 -Wall -g -O2   -c mflsssVariableTree.cpp -o mflsssVariableTree.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/include' -I/opt/R/x86_64/include   -I. -DGMP -falign-functions=64 -Wall -g -O2 -DR_BUILD -fPIC  -falign-functions=64 -Wall -g -O2   -c testIntegerize.cpp -o testIntegerize.o
clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o FLSSS.so BaB01kp.o BaBgapMulthreadKPs.o BaBgapMulthreadNodes.o DP01kp.o DPgapMultithreadKPs.o DPgapMultithreadNodes.o GAP.o GAgap.o Gknapsack.o RcppExports.o findBoundInterface.o flsss.o flsssVariableTree.o mflsss.o mflsssArb.o mflsssComoPar.o mflsssDecomp.o mflsssVariableTree.o testIntegerize.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -lgmp -L/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppParallel/lib -ltbb -ltbbmalloc -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.4/FLSSS.Rcheck/00LOCK-FLSSS/00new/FLSSS/libs
** generating debug symbols (dSYM)
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (FLSSS)