- using R version 4.4.1 (2024-06-14)
- using platform: aarch64-apple-darwin20
- R was compiled by
Apple clang version 14.0.0 (clang-1400.0.29.202)
GNU Fortran (GCC) 12.2.0
- running under: macOS Ventura 13.4
- using session charset: UTF-8
- checking for file ‘pam/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘pam’ version ‘1.0.0’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘pam’ can be installed ... [1s/2s] OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/0s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the package can be unloaded cleanly ... [0s/0s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
- checking loading without being on the library search path ... [0s/0s] OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [2s/2s] OK
- checking Rd files ... [0s/0s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking examples ... [2s/2s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [10s/11s] ERROR
Running ‘testthat.R’ [10s/11s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(pam)
>
> test_check("pam")
file: 20231123_03.csv processed with warning: simpleWarning in value[[3L]](cond): warning while calculating eilers peeters model: simpleWarning in value[[3L]](cond): failed to calculate etr_max: warning: simpleWarning in sqrt(a * c): NaNs produced
file: 20231123_04.csv processed with warning: simpleWarning in value[[3L]](cond): warning while calculating eilers peeters model: simpleWarning in value[[3L]](cond): failed to calculate etr_max: warning: simpleWarning in sqrt(a * c): NaNs produced
file: 20231123_06.csv processed with warning: simpleWarning in value[[3L]](cond): warning while calculating platt model: simpleWarning in value[[3L]](cond): failed to calculate im: warning: simpleWarning in log((alpha + beta)/beta): NaNs produced
file: 20231214.csv processed with warning: simpleWarning in value[[3L]](cond): warning while calculating platt model: simpleWarning in value[[3L]](cond): failed to calculate im: warning: simpleWarning in log((alpha + beta)/beta): NaNs produced
file: 20231214_11.csv processed with warning: simpleWarning in value[[3L]](cond): warning while calculating eilers peeters model: simpleWarning in value[[3L]](cond): failed to calculate etr_max: warning: simpleWarning in sqrt(a * c): NaNs produced
file: 20231214_14.csv processed with warning: simpleWarning in value[[3L]](cond): warning while calculating eilers peeters model: simpleWarning in value[[3L]](cond): failed to calculate etr_max: warning: simpleWarning in sqrt(a * c): NaNs produced
file: 20231214_15.csv processed with warning: simpleWarning in value[[3L]](cond): warning while calculating eilers peeters model: simpleWarning in value[[3L]](cond): failed to calculate etr_max: warning: simpleWarning in sqrt(a * c): NaNs produced
file: 20231214_10.csv processed with warning: simpleWarning in value[[3L]](cond): warning while calculating platt model: simpleWarning in value[[3L]](cond): failed to calculate im: warning: simpleWarning in log((alpha + beta)/beta): NaNs produced
[ FAIL 19 | WARN 10 | SKIP 0 | PASS 20 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-compare_regression_models_etr_I.R:25:5'): compare_regression_models etr I ──
Error in `eval(code, test_env)`: Unsupported operating system: Darwin
── Error ('test-compare_regression_models_etr_II.R:25:5'): compare_regression_models etr II ──
Error in `eval(code, test_env)`: Unsupported operating system: Darwin
── Error ('test-compare_regression_models_total.R:34:5'): compare_regression_models etr I + II ──
Error in `eval(code, test_env)`: Unsupported operating system: Darwin
── Error ('test-eilers_peeters_etr_I.R:29:5'): test-eilers_peeters_etr_I generate regression 20240925.csv ──
Error in `eval(code, test_env)`: Unsupported operating system: Darwin
── Error ('test-eilers_peeters_etr_I.R:95:5'): test-eilers_peeters_etr_I generate regression modified 20240925.csv ──
Error in `eval(code, test_env)`: Unsupported operating system: Darwin
── Error ('test-eilers_peeters_etr_II.R:29:5'): test-eilers_peeters_etr_II generate regression 20240925.csv ──
Error in `eval(code, test_env)`: Unsupported operating system: Darwin
── Error ('test-eilers_peeters_etr_II.R:78:5'): test-eilers_peeters_etr_II modified 20240925.csv ──
Error in `eval(code, test_env)`: Unsupported operating system: Darwin
── Error ('test-platt_etr_I.R:29:5'): test-platt_etr_I generate regression 20240925.csv ──
Error in `eval(code, test_env)`: Unsupported operating system: Darwin
── Error ('test-platt_etr_I.R:75:5'): test-platt_etr_I generate regression modified 20240925.csv ──
Error in `eval(code, test_env)`: Unsupported operating system: Darwin
── Error ('test-platt_etr_II.R:29:5'): test-platt_etr_II generate regression 20240925.csv ──
Error in `eval(code, test_env)`: Unsupported operating system: Darwin
── Error ('test-platt_etr_II.R:92:5'): test-platt_etr_II generate regression modified 20240925.csv ──
Error in `eval(code, test_env)`: Unsupported operating system: Darwin
── Error ('test-vollenweider_etr_I.R:29:5'): test-vollenweider_etr_I generate regression 20240925.csv ──
Error in `eval(code, test_env)`: Unsupported operating system: Darwin
── Error ('test-vollenweider_etr_I.R:92:5'): test-vollenweider_etr_I generate regression modified 20240925.csv ──
Error in `eval(code, test_env)`: Unsupported operating system: Darwin
── Error ('test-vollenweider_etr_II.R:29:5'): test-vollenweider_etr_II generate regression 20240925.csv ──
Error in `eval(code, test_env)`: Unsupported operating system: Darwin
── Error ('test-vollenweider_etr_II.R:92:5'): test-vollenweider_etr_II generate regression modified 20240925.csv ──
Error in `eval(code, test_env)`: Unsupported operating system: Darwin
── Error ('test-walsby_etr_I.R:19:5'): test-walsby_etr_I generate regression 20240925.csv ──
Error in `eval(code, test_env)`: Unsupported operating system: Darwin
── Error ('test-walsby_etr_I.R:82:5'): test-walsby_etr_I generate regression modified 20240925.csv ──
Error in `eval(code, test_env)`: Unsupported operating system: Darwin
── Error ('test-walsby_etr_II.R:19:5'): test-walsby_etr_II generate regression 20240925.csv ──
Error in `eval(code, test_env)`: Unsupported operating system: Darwin
── Error ('test-walsby_etr_II.R:82:5'): test-walsby_etr_II generate regression modified 20240925.csv ──
Error in `eval(code, test_env)`: Unsupported operating system: Darwin
[ FAIL 19 | WARN 10 | SKIP 0 | PASS 20 ]
Error: Test failures
Execution halted
- checking PDF version of manual ... [4s/5s] OK
- DONE
Status: 1 ERROR
- using check arguments '--no-clean-on-error '