- using R version 4.4.1 (2024-06-14)
- using platform: aarch64-apple-darwin20
- R was compiled by
Apple clang version 14.0.0 (clang-1400.0.29.202)
GNU Fortran (GCC) 12.2.0
- running under: macOS Ventura 13.4
- using session charset: UTF-8
- checking for file ‘igraph/DESCRIPTION’ ... OK
- this is package ‘igraph’ version ‘2.1.3’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘igraph’ can be installed ... [78s/89s] OK
See the install log for details.
- used C compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
- used C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
- used SDK: ‘MacOSX11.3.sdk’
- checking installed package size ... NOTE
installed size is 22.8Mb
sub-directories of 1Mb or more:
R 2.0Mb
doc 1.2Mb
help 2.0Mb
libs 17.1Mb
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/0s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the package can be unloaded cleanly ... [0s/0s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
- checking loading without being on the library search path ... [0s/0s] OK
- checking whether startup messages can be suppressed ... [0s/0s] OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [15s/15s] OK
- checking Rd files ... [2s/2s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking line endings in shell scripts ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking compilation flags in Makevars ... OK
- checking for GNU extensions in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking use of PKG_*FLAGS in Makefiles ... OK
- checking compiled code ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [10s/11s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [68s/37s] ERROR
Running ‘testthat.R’ [68s/37s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(igraph)
Attaching package: 'igraph'
The following object is masked from 'package:testthat':
compare
The following objects are masked from 'package:stats':
decompose, spectrum
The following object is masked from 'package:base':
union
>
> test_check("igraph")
Starting 2 test processes
[ FAIL 1 | WARN 0 | SKIP 65 | PASS 4492 ]
══ Skipped tests (65) ══════════════════════════════════════════════════════════
• On CRAN (63): 'test-vs-es.R:136:3', 'test-vs-es.R:157:3',
'test-vs-es.R:180:3', 'test-adjacency.R:576:3', 'test-adjacency.R:607:3',
'test-bug-501-rectangles.R:17:3', 'test-centrality.R:68:5',
'test-centrality.R:117:5', 'test-centrality.R:125:3',
'test-centrality.R:695:3', 'test-conversion.R:42:3',
'test-conversion.R:49:3', 'test-conversion.R:132:3',
'test-conversion.R:188:3', 'test-games.R:61:3', 'test-games.R:81:3',
'test-graph.data.frame.R:49:3', 'test-hrg.R:15:3', 'test-incidence.R:9:3',
'test-incidence.R:25:3', 'test-incidence.R:87:3', 'test-incidence.R:103:3',
'test-incidence.R:162:3', 'test-interface.R:184:3', 'test-make.R:61:3',
'test-make.R:70:3', 'test-make.R:78:3', 'test-make.R:88:3',
'test-make.R:96:3', 'test-layout.R:20:3', 'test-layout.R:153:3',
'test-layout.R:208:3', 'test-minimal.st.separators.R:12:3',
'test-modularity_matrix.R:18:3', 'test-old-data-type.R:94:3',
'test-operators.R:156:3', 'test-par.R:5:3', 'test-par.R:15:3',
'test-paths.R:22:3', 'test-paths.R:47:3', 'test-plot.R:17:3',
'test-plot.R:42:3', 'test-plot.R:67:3', 'test-print.R:51:3',
'test-rng.R:2:3', 'test-serialize.R:9:3', 'test-trees.R:204:3',
'test-utils-assert-args.R:2:3', 'test-utils-assert-args.R:10:3',
'test-structural.properties.R:18:3', 'test-structural.properties.R:182:3',
'test-structural.properties.R:202:3', 'test-versions.R:9:3',
'test-versions.R:19:3', 'test-versions.R:25:3', 'test-versions.R:40:3',
'test-versions.R:55:3', 'test-versions.R:72:3', 'test-versions.R:98:3',
'test-vs-es-printing.R:10:3', 'test-vs-es-printing.R:28:3',
'test-vs-es-printing.R:43:3', 'test-vs-es-printing.R:59:3'
• empty test (1): 'test-topology.R:45:1'
• nested igraph call handling not implemented yet (1):
'test-structural.properties.R:166:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-graphNEL.R:11:3'): graphNEL conversion works ───────────────────
Error in `gi$map12`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─testthat::expect_equal(gi$map12, 1:vcount(g)) at test-graphNEL.R:11:3
2. └─testthat::quasi_label(enquo(object), label, arg = "object")
3. └─rlang::eval_bare(expr, quo_get_env(quo))
[ FAIL 1 | WARN 0 | SKIP 65 | PASS 4492 ]
Error: Test failures
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [15s/17s] OK
- checking PDF version of manual ... [22s/23s] OK
- DONE
Status: 1 ERROR, 1 NOTE
- using check arguments '--no-clean-on-error '