- using R version 4.4.0 alpha (2024-03-31 r86238)
- using platform: aarch64-apple-darwin20
- R was compiled by
Apple clang version 14.0.0 (clang-1400.0.29.202)
GNU Fortran (GCC) 12.2.0
- running under: macOS Ventura 13.4
- using session charset: UTF-8
- checking for file ‘gestate/DESCRIPTION’ ... OK
- this is package ‘gestate’ version ‘1.6.0’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘gestate’ can be installed ... [6s/6s] OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [1s/1s] OK
- checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the package can be unloaded cleanly ... [1s/1s] OK
- checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
- checking loading without being on the library search path ... [1s/1s] OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [6s/6s] OK
- checking Rd files ... [0s/0s] NOTE
checkRd: (-1) analyse_sim.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
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checkRd: (-1) event_prediction_prior.Rd:89: Lost braces in \itemize; \value handles \item{}{} directly
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checkRd: (-1) fit_KM.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) fit_KM.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
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checkRd: (-1) fit_tte_data.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
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checkRd: (-1) nph_traj.Rd:50: Lost braces in \itemize; \value handles \item{}{} directly
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checkRd: (-1) nph_traj.Rd:73: Lost braces in \itemize; \value handles \item{}{} directly
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checkRd: (-1) plot_npht.Rd:54: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plot_npht.Rd:55: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plot_npht.Rd:56: Lost braces in \itemize; meant \describe ?
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checkRd: (-1) plot_npht.Rd:58: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plot_npht.Rd:59: Lost braces in \itemize; meant \describe ?
checkRd: (-1) simulate_trials.Rd:62: Lost braces in \itemize; \value handles \item{}{} directly
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checkRd: (-1) simulate_trials_strata.Rd:68: Lost braces in \itemize; \value handles \item{}{} directly
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checkRd: (-1) summarise_analysis.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
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checkRd: (-1) survfit_fast.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
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- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [4s/5s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [4s/5s] OK
Running ‘testthat.R’ [4s/4s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [22s/23s] OK
- checking PDF version of manual ... [5s/6s] OK
- DONE
Status: 1 NOTE
- using check arguments '--no-clean-on-error '