* installing to library ‘/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages’ * installing *source* package ‘rlibkriging’ ... ** package ‘rlibkriging’ successfully unpacked and MD5 sums checked ** using staged installation set CMAKE_BIN=/usr/bin/cmake set CC=gcc-14 set FC=gfortran-14 set CFLAGS=-I/usr/local/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native set CXX=g++-14 set CXXFLAGS=-std=gnu++17 -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native set LDFLAGS=-Wl,-O1 travis-ci -- [31mC [32mo [33ml [34mo [35mr [36mm [37mo [1;31md [1;32me [1;33me [1;34mn [1;35ma [1;36mb [1;37ml [31me [32md [m fatal: not a git repository (or any parent up to mount point /) Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc-14 - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++-14 - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Deprecation Warning at armadillo/CMakeLists.txt:31 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument <min> value or use a ...<max> suffix to tell CMake that the project does not need compatibility with older versions. -- *** set cmake policy CMP0025 to NEW -- CMAKE_CXX_STANDARD = 11 -- Configuring Armadillo 11.4.2 -- -- *** WARNING: variable 'CMAKE_CXX_FLAGS' is not empty; this may cause problems! -- -- Detected gcc 4.8.3 or later -- ARMA_USE_EXTERN_RNG = true -- CMAKE_SYSTEM_NAME = Linux -- CMAKE_CXX_COMPILER_ID = GNU -- CMAKE_CXX_COMPILER_VERSION = 14.2.0 -- CMAKE_COMPILER_IS_GNUCXX = 1 -- -- *** Options: -- BUILD_SHARED_LIBS = off -- DETECT_HDF5 = false -- OPENBLAS_PROVIDES_LAPACK = OFF -- ALLOW_FLEXIBLAS_LINUX = ON -- ALLOW_OPENBLAS_MACOS = OFF -- ALLOW_BLAS_LAPACK_MACOS = OFF -- BUILD_SMOKE_TEST = OFF -- -- *** Looking for external libraries -- Found BLAS: /usr/lib/x86_64-linux-gnu/libblas.so -- Found LAPACK: /usr/lib/x86_64-linux-gnu/liblapack.so -- FlexiBLAS_FOUND = NO -- MKL_FOUND = NO -- OpenBLAS_FOUND = NO -- ATLAS_FOUND = NO -- BLAS_FOUND = YES -- LAPACK_FOUND = YES -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Found ARPACK: /usr/lib/x86_64-linux-gnu/libarpack.so -- ARPACK_FOUND = YES -- Looking for SuperLU version 5 -- Found SuperLU version 7, but version 5 is required -- Could not find SuperLU -- SuperLU_FOUND = NO -- -- *** Result of configuration: -- *** ARMA_USE_WRAPPER = true -- *** ARMA_USE_LAPACK = true -- *** ARMA_USE_BLAS = true -- *** ARMA_USE_ATLAS = false -- *** ARMA_USE_HDF5_CMAKE = false -- *** ARMA_USE_ARPACK = true -- *** ARMA_USE_EXTERN_RNG = true -- *** ARMA_USE_SUPERLU = false -- -- *** Armadillo wrapper library will use the following libraries: -- *** ARMA_LIBS = /usr/lib/x86_64-linux-gnu/libblas.so;/usr/lib/x86_64-linux-gnu/liblapack.so;/usr/lib/x86_64-linux-gnu/libarpack.so -- -- Copying /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/armadillo/include/ to /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/armadillo/tmp/include/ -- Generating /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/armadillo/tmp/include/config.hpp -- CMAKE_CXX_FLAGS = -g -O2 -Wall -pedantic -mtune=native -O2 -- CMAKE_SHARED_LINKER_FLAGS = -Wl,-O1 -Wl,--no-as-needed -- CMAKE_REQUIRED_INCLUDES = -- -- CMAKE_INSTALL_PREFIX = /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed -- CMAKE_INSTALL_LIBDIR = lib -- CMAKE_INSTALL_INCLUDEDIR = include -- CMAKE_INSTALL_DATADIR = share -- CMAKE_INSTALL_BINDIR = bin -- Generating '/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/armadillo/ArmadilloConfig.cmake' -- Generating '/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/armadillo/ArmadilloConfigVersion.cmake' -- Generating '/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/armadillo/InstallFiles/ArmadilloConfig.cmake' -- Generating '/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/armadillo/InstallFiles/ArmadilloConfigVersion.cmake' -- Copying /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/armadillo/misc/ to /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/armadillo/tmp/misc/ -- Generating '/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/armadillo/tmp/misc/armadillo.pc' -- Build static library -- Static analysis not available. -- Octave binding available [v9.2.0] but disabled as requested. -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Could NOT find Matlab (missing: Matlab_INCLUDE_DIRS MAIN_PROGRAM) -- Matlab binding not available CMake Warning (dev) at CMakeLists.txt:475 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.12.8", minimum required is "3.7") -- Checking Python requirements ✔ Module numpy>=1.18,<2 is available ✔ Module pytest is available ✔ Module setuptools is available ✔ Module packaging is available ✔ Module wheel is available -- PYTHON binding available but disabled as requested. -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success -- Performing Test COMPILER_HAS_DEPRECATED_ATTR -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success CMake Warning at CMakeLists.txt:646 (message): clang-format no found; clang-format target is not available. CMake Warning at CMakeLists.txt:680 (message): doxygen no found; doc target is not available. -- Configuring done (1.8s) -- Generating done (0.0s) -- Build files have been written to: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build gmake[1]: Entering directory '/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build' make[2]: Entering directory '/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build' make[3]: Entering directory '/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build' make[4]: Entering directory '/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build' make[4]: Leaving directory '/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build' make[4]: Entering directory '/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build' [ 3%] Building CXX object armadillo/CMakeFiles/armadillo.dir/src/wrapper1.cpp.o [ 6%] Building CXX object armadillo/CMakeFiles/armadillo.dir/src/wrapper2.cpp.o [ 10%] Linking CXX static library libarmadillo.a make[4]: Leaving directory '/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build' [ 10%] Built target armadillo make[4]: Entering directory '/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build' make[4]: Leaving directory '/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build' make[4]: Entering directory '/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build' [ 13%] Building C object lbfgsb_cpp/CMakeFiles/lbfgsb_cpp.dir/Lbfgsb.3.0/blas.c.o [ 17%] Building C object lbfgsb_cpp/CMakeFiles/lbfgsb_cpp.dir/Lbfgsb.3.0/lbfgsb.c.o /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c: In function ‘mainlb_’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:507:19: warning: unused variable ‘io___70’ [-Wunused-variable] 507 | static cilist io___70 = { 0, 6, 0, fmt_1007, 0 }; | ^~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:506:19: warning: unused variable ‘io___69’ [-Wunused-variable] 506 | static cilist io___69 = { 0, 6, 0, fmt_1004, 0 }; | ^~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:505:19: warning: unused variable ‘io___65’ [-Wunused-variable] 505 | static cilist io___65 = { 0, 6, 0, fmt_1008, 0 }; | ^~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:504:19: warning: unused variable ‘io___63’ [-Wunused-variable] 504 | static cilist io___63 = { 0, 6, 0, fmt_1005, 0 }; | ^~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:503:19: warning: unused variable ‘io___62’ [-Wunused-variable] 503 | static cilist io___62 = { 0, 6, 0, fmt_1006, 0 }; | ^~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:502:19: warning: unused variable ‘io___60’ [-Wunused-variable] 502 | static cilist io___60 = { 0, 6, 0, fmt_1005, 0 }; | ^~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:501:19: warning: unused variable ‘io___58’ [-Wunused-variable] 501 | static cilist io___58 = { 0, 6, 0, fmt_1001, 0 }; | ^~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:500:19: warning: unused variable ‘io___57’ [-Wunused-variable] 500 | static cilist io___57 = { 0, 0, 0, fmt_1003, 0 }; | ^~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:499:19: warning: unused variable ‘io___56’ [-Wunused-variable] 499 | static cilist io___56 = { 0, 6, 0, fmt_1002, 0 }; | ^~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:389:11: warning: unused variable ‘o__1’ [-Wunused-variable] 389 | olist o__1; | ^~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c: In function ‘active_’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1264:19: warning: unused variable ‘io___77’ [-Wunused-variable] 1264 | static cilist io___77 = { 0, 6, 0, fmt_1001, 0 }; | ^~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1263:19: warning: unused variable ‘io___76’ [-Wunused-variable] 1263 | static cilist io___76 = { 0, 6, 0, 0, 0 }; | ^~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1262:19: warning: unused variable ‘io___75’ [-Wunused-variable] 1262 | static cilist io___75 = { 0, 6, 0, 0, 0 }; | ^~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c: In function ‘cauchy_’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1594:19: warning: unused variable ‘io___126’ [-Wunused-variable] 1594 | static cilist io___126 = { 0, 6, 0, fmt_2010, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1593:19: warning: unused variable ‘io___125’ [-Wunused-variable] 1593 | static cilist io___125 = { 0, 6, 0, fmt_1010, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1592:19: warning: unused variable ‘io___124’ [-Wunused-variable] 1592 | static cilist io___124 = { 0, 6, 0, fmt_6010, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1591:19: warning: unused variable ‘io___123’ [-Wunused-variable] 1591 | static cilist io___123 = { 0, 6, 0, fmt_4010, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1590:19: warning: unused variable ‘io___122’ [-Wunused-variable] 1590 | static cilist io___122 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1589:19: warning: unused variable ‘io___121’ [-Wunused-variable] 1589 | static cilist io___121 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1588:19: warning: unused variable ‘io___116’ [-Wunused-variable] 1588 | static cilist io___116 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1587:19: warning: unused variable ‘io___113’ [-Wunused-variable] 1587 | static cilist io___113 = { 0, 6, 0, fmt_6010, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1586:19: warning: unused variable ‘io___112’ [-Wunused-variable] 1586 | static cilist io___112 = { 0, 6, 0, fmt_5010, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1585:19: warning: unused variable ‘io___111’ [-Wunused-variable] 1585 | static cilist io___111 = { 0, 6, 0, fmt_4011, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1584:19: warning: unused variable ‘io___104’ [-Wunused-variable] 1584 | static cilist io___104 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1583:19: warning: unused variable ‘io___99’ [-Wunused-variable] 1583 | static cilist io___99 = { 0, 6, 0, fmt_1010, 0 }; | ^~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1582:19: warning: unused variable ‘io___90’ [-Wunused-variable] 1582 | static cilist io___90 = { 0, 6, 0, fmt_3010, 0 }; | ^~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1581:19: warning: unused variable ‘io___82’ [-Wunused-variable] 1581 | static cilist io___82 = { 0, 6, 0, 0, 0 }; | ^~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c: In function ‘freev_’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:2812:19: warning: unused variable ‘io___167’ [-Wunused-variable] 2812 | static cilist io___167 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:2811:19: warning: unused variable ‘io___165’ [-Wunused-variable] 2811 | static cilist io___165 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:2810:19: warning: unused variable ‘io___164’ [-Wunused-variable] 2810 | static cilist io___164 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:2809:19: warning: unused variable ‘io___163’ [-Wunused-variable] 2809 | static cilist io___163 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c: In function ‘lnsrlb_’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3089:19: warning: unused variable ‘io___178’ [-Wunused-variable] 3089 | static cilist io___178 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c: In function ‘prn1lb_’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3374:19: warning: unused variable ‘io___189’ [-Wunused-variable] 3374 | static cilist io___189 = { 0, 6, 0, fmt_1004, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3373:19: warning: unused variable ‘io___188’ [-Wunused-variable] 3373 | static cilist io___188 = { 0, 6, 0, fmt_1004, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3372:19: warning: unused variable ‘io___186’ [-Wunused-variable] 3372 | static cilist io___186 = { 0, 6, 0, fmt_1004, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3371:19: warning: unused variable ‘io___185’ [-Wunused-variable] 3371 | static cilist io___185 = { 0, 0, 0, fmt_9001, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3370:19: warning: unused variable ‘io___184’ [-Wunused-variable] 3370 | static cilist io___184 = { 0, 0, 0, 0, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3369:19: warning: unused variable ‘io___183’ [-Wunused-variable] 3369 | static cilist io___183 = { 0, 0, 0, fmt_2001, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3368:19: warning: unused variable ‘io___182’ [-Wunused-variable] 3368 | static cilist io___182 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3367:19: warning: unused variable ‘io___181’ [-Wunused-variable] 3367 | static cilist io___181 = { 0, 6, 0, fmt_7001, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3364:20: warning: unused variable ‘i__’ [-Wunused-variable] 3364 | static integer i__; | ^~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3356:13: warning: unused variable ‘i__1’ [-Wunused-variable] 3356 | integer i__1; | ^~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c: In function ‘prn2lb_’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3493:19: warning: unused variable ‘io___197’ [-Wunused-variable] 3493 | static cilist io___197 = { 0, 0, 0, fmt_3001, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3492:19: warning: unused variable ‘io___196’ [-Wunused-variable] 3492 | static cilist io___196 = { 0, 6, 0, fmt_2001, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3491:19: warning: unused variable ‘io___194’ [-Wunused-variable] 3491 | static cilist io___194 = { 0, 6, 0, fmt_1004, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3490:19: warning: unused variable ‘io___192’ [-Wunused-variable] 3490 | static cilist io___192 = { 0, 6, 0, fmt_1004, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3489:19: warning: unused variable ‘io___191’ [-Wunused-variable] 3489 | static cilist io___191 = { 0, 6, 0, fmt_2001, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3488:19: warning: unused variable ‘io___190’ [-Wunused-variable] 3488 | static cilist io___190 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3485:25: warning: variable ‘imod’ set but not used [-Wunused-but-set-variable] 3485 | static integer i__, imod; | ^~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3485:20: warning: unused variable ‘i__’ [-Wunused-variable] 3485 | static integer i__, imod; | ^~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3476:13: warning: unused variable ‘i__1’ [-Wunused-variable] 3476 | integer i__1; | ^~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c: In function ‘prn3lb_’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3691:19: warning: unused variable ‘io___225’ [-Wunused-variable] 3691 | static cilist io___225 = { 0, 0, 0, fmt_3008, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3690:19: warning: unused variable ‘io___224’ [-Wunused-variable] 3690 | static cilist io___224 = { 0, 0, 0, fmt_9019, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3689:19: warning: unused variable ‘io___223’ [-Wunused-variable] 3689 | static cilist io___223 = { 0, 0, 0, fmt_9018, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3688:19: warning: unused variable ‘io___222’ [-Wunused-variable] 3688 | static cilist io___222 = { 0, 0, 0, fmt_9015, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3687:19: warning: unused variable ‘io___221’ [-Wunused-variable] 3687 | static cilist io___221 = { 0, 0, 0, fmt_9014, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3686:19: warning: unused variable ‘io___220’ [-Wunused-variable] 3686 | static cilist io___220 = { 0, 0, 0, fmt_9013, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3685:19: warning: unused variable ‘io___219’ [-Wunused-variable] 3685 | static cilist io___219 = { 0, 0, 0, fmt_9012, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3684:19: warning: unused variable ‘io___218’ [-Wunused-variable] 3684 | static cilist io___218 = { 0, 0, 0, fmt_9011, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3683:19: warning: unused variable ‘io___217’ [-Wunused-variable] 3683 | static cilist io___217 = { 0, 0, 0, fmt_3009, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3682:19: warning: unused variable ‘io___216’ [-Wunused-variable] 3682 | static cilist io___216 = { 0, 0, 0, fmt_3002, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3681:19: warning: unused variable ‘io___215’ [-Wunused-variable] 3681 | static cilist io___215 = { 0, 6, 0, fmt_3008, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3680:19: warning: unused variable ‘io___214’ [-Wunused-variable] 3680 | static cilist io___214 = { 0, 6, 0, fmt_3007, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3679:19: warning: unused variable ‘io___213’ [-Wunused-variable] 3679 | static cilist io___213 = { 0, 6, 0, fmt_9019, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3678:19: warning: unused variable ‘io___212’ [-Wunused-variable] 3678 | static cilist io___212 = { 0, 6, 0, fmt_9018, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3677:19: warning: unused variable ‘io___211’ [-Wunused-variable] 3677 | static cilist io___211 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3676:19: warning: unused variable ‘io___210’ [-Wunused-variable] 3676 | static cilist io___210 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3675:19: warning: unused variable ‘io___209’ [-Wunused-variable] 3675 | static cilist io___209 = { 0, 6, 0, fmt_9015, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3674:19: warning: unused variable ‘io___208’ [-Wunused-variable] 3674 | static cilist io___208 = { 0, 6, 0, fmt_9014, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3673:19: warning: unused variable ‘io___207’ [-Wunused-variable] 3673 | static cilist io___207 = { 0, 6, 0, fmt_9013, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3672:19: warning: unused variable ‘io___206’ [-Wunused-variable] 3672 | static cilist io___206 = { 0, 6, 0, fmt_9012, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3671:19: warning: unused variable ‘io___205’ [-Wunused-variable] 3671 | static cilist io___205 = { 0, 6, 0, fmt_9011, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3670:19: warning: unused variable ‘io___204’ [-Wunused-variable] 3670 | static cilist io___204 = { 0, 6, 0, fmt_3009, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3669:19: warning: unused variable ‘io___203’ [-Wunused-variable] 3669 | static cilist io___203 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3668:19: warning: unused variable ‘io___201’ [-Wunused-variable] 3668 | static cilist io___201 = { 0, 6, 0, fmt_1004, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3667:19: warning: unused variable ‘io___200’ [-Wunused-variable] 3667 | static cilist io___200 = { 0, 6, 0, fmt_3005, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3666:19: warning: unused variable ‘io___199’ [-Wunused-variable] 3666 | static cilist io___199 = { 0, 6, 0, fmt_3004, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3665:19: warning: unused variable ‘io___198’ [-Wunused-variable] 3665 | static cilist io___198 = { 0, 6, 0, fmt_3003, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3662:20: warning: unused variable ‘i__’ [-Wunused-variable] 3662 | static integer i__; | ^~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3654:13: warning: unused variable ‘i__1’ [-Wunused-variable] 3654 | integer i__1; | ^~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c: In function ‘subsm_’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3989:19: warning: unused variable ‘io___246’ [-Wunused-variable] 3989 | static cilist io___246 = { 0, 6, 0, fmt_1004, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3988:19: warning: unused variable ‘io___243’ [-Wunused-variable] 3988 | static cilist io___243 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3987:19: warning: unused variable ‘io___242’ [-Wunused-variable] 3987 | static cilist io___242 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3986:19: warning: unused variable ‘io___228’ [-Wunused-variable] 3986 | static cilist io___228 = { 0, 6, 0, fmt_1001, 0 }; | ^~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c: In function ‘dcsrch_’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:4705:16: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 4705 | if (brackt && (*stp <= stmin || *stp >= stmax) || brackt && stmax - stmin | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c: At top level: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:26:16: warning: ‘c__5’ defined but not used [-Wunused-variable] 26 | static integer c__5 = 5; | ^~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:25:16: warning: ‘c__3’ defined but not used [-Wunused-variable] 25 | static integer c__3 = 3; | ^~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:23:16: warning: ‘c__9’ defined but not used [-Wunused-variable] 23 | static integer c__9 = 9; | ^~~~ [ 20%] Building C object lbfgsb_cpp/CMakeFiles/lbfgsb_cpp.dir/Lbfgsb.3.0/linpack.c.o [ 24%] Building C object lbfgsb_cpp/CMakeFiles/lbfgsb_cpp.dir/Lbfgsb.3.0/s_cmp.c.o [ 27%] Building C object lbfgsb_cpp/CMakeFiles/lbfgsb_cpp.dir/Lbfgsb.3.0/s_copy.c.o [ 31%] Building C object lbfgsb_cpp/CMakeFiles/lbfgsb_cpp.dir/Lbfgsb.3.0/timer.c.o [ 34%] Linking C static library liblbfgsb_cpp.a make[4]: Leaving directory '/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build' [ 34%] Built target lbfgsb_cpp make[4]: Entering directory '/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build' make[4]: Leaving directory '/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build' make[4]: Entering directory '/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build' [ 37%] Building CXX object src/lib/CMakeFiles/Kriging.dir/demo/DemoClass.cpp.o [ 41%] Building CXX object src/lib/CMakeFiles/Kriging.dir/demo/DemoFunction.cpp.o [ 44%] Building CXX object src/lib/CMakeFiles/Kriging.dir/demo/DemoArmadilloClass.cpp.o [ 48%] Building CXX object src/lib/CMakeFiles/Kriging.dir/Trend.cpp.o [ 51%] Building CXX object src/lib/CMakeFiles/Kriging.dir/Optim.cpp.o [ 55%] Building CXX object src/lib/CMakeFiles/Kriging.dir/Random.cpp.o [ 58%] Building CXX object src/lib/CMakeFiles/Kriging.dir/LinearAlgebra.cpp.o [ 62%] Building CXX object src/lib/CMakeFiles/Kriging.dir/Covariance.cpp.o [ 65%] Building CXX object src/lib/CMakeFiles/Kriging.dir/Kriging.cpp.o /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp: In member function ‘Kriging::KModel Kriging::make_Model(const arma::vec&, std::map<std::__cxx11::basic_string<char>, double>*) const’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp:120:15: warning: unused variable ‘d’ [-Wunused-variable] 120 | arma::uword d = m_X.n_cols; | ^ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp: In member function ‘double Kriging::_logLikelihood(const arma::vec&, arma::vec*, arma::mat*, KModel*, std::map<std::__cxx11::basic_string<char>, double>*) const’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp:191:17: warning: unused variable ‘p’ [-Wunused-variable] 191 | arma::uword p = m_F.n_cols; | ^ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp: In member function ‘std::tuple<arma::Col<double>, arma::Col<double> > Kriging::leaveOneOutVec(const arma::vec&)’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp:497:10: warning: variable ‘loo’ set but not used [-Wunused-but-set-variable] 497 | double loo = -1; | ^~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp: In member function ‘void Kriging::fit(const arma::vec&, const arma::mat&, const Trend::RegressionModel&, bool, const std::string&, const std::string&, const Parameters&)’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp:1146:33: warning: comparison of integer expressions of different signedness: ‘arma::uword’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 1146 | for (arma::uword i = 0; i < multistart; i++) { // TODO: use some foreach/pragma to let OpenMP work. | ~~^~~~~~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp:1311:33: warning: comparison of integer expressions of different signedness: ‘arma::uword’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 1311 | for (arma::uword i = 0; i < multistart; i++) { // TODO: use some foreach/pragma to let OpenMP work. | ~~^~~~~~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp: In member function ‘arma::mat Kriging::update_simulate(const arma::vec&, const arma::mat&)’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp:1718:15: warning: unused variable ‘d’ [-Wunused-variable] 1718 | arma::uword d = m_X.n_cols; | ^ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp:1722:15: warning: unused variable ‘n_on’ [-Wunused-variable] 1722 | arma::uword n_on = n_o + n_n; | ^~~~ In file included from /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/armadillo/tmp/include/armadillo:637, from /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/include/libKriging/utils/lk_armadillo.hpp:6, from /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp:8: In destructor ‘arma::Mat<eT>::~Mat() [with eT = double]’, inlined from ‘arma::Col<double>::~Col()’ at /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/armadillo/tmp/include/armadillo_bits/Col_bones.hpp:25:7, inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_destroy() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:283:35, inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:314:14, inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:311:7, inlined from ‘std::_Optional_payload<_Tp, false, _Copy, _Move>::~_Optional_payload() [with _Tp = arma::Col<double>; bool _Copy = false; bool _Move = false]’ at /usr/include/c++/14/optional:437:65, inlined from ‘std::_Optional_base<arma::Col<double>, false, false>::~_Optional_base()’ at /usr/include/c++/14/optional:508:12, inlined from ‘constexpr std::optional<_Tp>::optional(std::optional<_Up>&&) [with _Up = arma::Gen<arma::Col<double>, arma::gen_ones>; typename std::enable_if<__and_v<std::__not_<std::is_same<_T1, _U1> >, std::is_constructible<_T1, _U1>, std::is_convertible<_U1, _T1>, std::__not_<std::__or_<std::is_constructible<_Tp, const std::optional<_Up>&>, std::is_constructible<_Tp, std::optional<_Up>&>, std::is_constructible<_Tp, const std::optional<_Up>&&>, std::is_constructible<_Tp, std::optional<_Up>&&>, std::is_convertible<const std::optional<_Up>&, _Tp>, std::is_convertible<std::optional<_Up>&, _Tp>, std::is_convertible<const std::optional<_Up>&&, _Tp>, std::is_convertible<std::optional<_Up>&&, _Tp> > > >, bool>::type <anonymous> = true; _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:795:2, inlined from ‘void Kriging::update(const arma::vec&, const arma::mat&, bool)’ at /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp:1860:20: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/armadillo/tmp/include/armadillo_bits/Mat_meat.hpp:29:6: warning: ‘*(arma::Mat<double>*)((char*)&<unnamed> + offsetof(Parameters, KrigingParameters::beta.std::optional<arma::Col<double> >::<unnamed>.std::_Optional_base<arma::Col<double>, false, false>::<unnamed>)).arma::Mat<double>::n_alloc’ may be used uninitialized [-Wmaybe-uninitialized] 29 | if(n_alloc > 0) | ^~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp: In member function ‘void Kriging::update(const arma::vec&, const arma::mat&, bool)’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp:1865:35: note: ‘<anonymous>’ declared here 1865 | true}; | ^ In destructor ‘arma::Mat<eT>::~Mat() [with eT = double]’, inlined from ‘arma::Col<double>::~Col()’ at /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/armadillo/tmp/include/armadillo_bits/Col_bones.hpp:25:7, inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_destroy() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:283:35, inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:314:14, inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:311:7, inlined from ‘std::_Optional_payload<_Tp, false, _Copy, _Move>::~_Optional_payload() [with _Tp = arma::Col<double>; bool _Copy = false; bool _Move = false]’ at /usr/include/c++/14/optional:437:65, inlined from ‘std::_Optional_base<arma::Col<double>, false, false>::~_Optional_base()’ at /usr/include/c++/14/optional:508:12, inlined from ‘constexpr std::optional<_Tp>::optional(std::optional<_Up>&&) [with _Up = arma::Gen<arma::Col<double>, arma::gen_ones>; typename std::enable_if<__and_v<std::__not_<std::is_same<_T1, _U1> >, std::is_constructible<_T1, _U1>, std::is_convertible<_U1, _T1>, std::__not_<std::__or_<std::is_constructible<_Tp, const std::optional<_Up>&>, std::is_constructible<_Tp, std::optional<_Up>&>, std::is_constructible<_Tp, const std::optional<_Up>&&>, std::is_constructible<_Tp, std::optional<_Up>&&>, std::is_convertible<const std::optional<_Up>&, _Tp>, std::is_convertible<std::optional<_Up>&, _Tp>, std::is_convertible<const std::optional<_Up>&&, _Tp>, std::is_convertible<std::optional<_Up>&&, _Tp> > > >, bool>::type <anonymous> = true; _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:795:2, inlined from ‘void Kriging::update(const arma::vec&, const arma::mat&, bool)’ at /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp:1860:20: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/armadillo/tmp/include/armadillo_bits/Mat_meat.hpp:32:20: warning: ‘((const double**)((char*)&<unnamed> + offsetof(Parameters, KrigingParameters::beta.std::optional<arma::Col<double> >::<unnamed>.std::_Optional_base<arma::Col<double>, false, false>::_M_payload.std::_Optional_payload<arma::Col<double>, false, false, false>::<unnamed>.std::_Optional_payload<arma::Col<double>, true, false, false>::<unnamed>.std::_Optional_payload_base<arma::Col<double> >::_M_payload)))[4]’ may be used uninitialized [-Wmaybe-uninitialized] 32 | memory::release( access::rw(mem) ); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp: In member function ‘void Kriging::update(const arma::vec&, const arma::mat&, bool)’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp:1865:35: note: ‘<anonymous>’ declared here 1865 | true}; | ^ In destructor ‘arma::Mat<eT>::~Mat() [with eT = double]’, inlined from ‘arma::Col<double>::~Col()’ at /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/armadillo/tmp/include/armadillo_bits/Col_bones.hpp:25:7, inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_destroy() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:283:35, inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:314:14, inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:311:7, inlined from ‘std::_Optional_payload<_Tp, false, _Copy, _Move>::~_Optional_payload() [with _Tp = arma::Col<double>; bool _Copy = false; bool _Move = false]’ at /usr/include/c++/14/optional:437:65, inlined from ‘std::_Optional_base<arma::Col<double>, false, false>::~_Optional_base()’ at /usr/include/c++/14/optional:508:12, inlined from ‘constexpr std::optional<_Tp>::optional(std::optional<_Up>&&) [with _Up = arma::Op<arma::Col<double>, arma::op_htrans2>; typename std::enable_if<__and_v<std::__not_<std::is_same<_T1, _U1> >, std::is_constructible<_T1, _U1>, std::is_convertible<_U1, _T1>, std::__not_<std::__or_<std::is_constructible<_Tp, const std::optional<_Up>&>, std::is_constructible<_Tp, std::optional<_Up>&>, std::is_constructible<_Tp, const std::optional<_Up>&&>, std::is_constructible<_Tp, std::optional<_Up>&&>, std::is_convertible<const std::optional<_Up>&, _Tp>, std::is_convertible<std::optional<_Up>&, _Tp>, std::is_convertible<const std::optional<_Up>&&, _Tp>, std::is_convertible<std::optional<_Up>&&, _Tp> > > >, bool>::type <anonymous> = true; _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:795:2, inlined from ‘void Kriging::update(const arma::vec&, const arma::mat&, bool)’ at /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp:1867:20: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/armadillo/tmp/include/armadillo_bits/Mat_meat.hpp:29:6: warning: ‘*(arma::Mat<double>*)((char*)&<unnamed> + offsetof(Parameters, KrigingParameters::beta.std::optional<arma::Col<double> >::<unnamed>.std::_Optional_base<arma::Col<double>, false, false>::<unnamed>)).arma::Mat<double>::n_alloc’ may be used uninitialized [-Wmaybe-uninitialized] 29 | if(n_alloc > 0) | ^~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp: In member function ‘void Kriging::update(const arma::vec&, const arma::mat&, bool)’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp:1872:36: note: ‘<anonymous>’ declared here 1872 | false}; | ^ In destructor ‘arma::Mat<eT>::~Mat() [with eT = double]’, inlined from ‘arma::Col<double>::~Col()’ at /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/armadillo/tmp/include/armadillo_bits/Col_bones.hpp:25:7, inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_destroy() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:283:35, inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:314:14, inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:311:7, inlined from ‘std::_Optional_payload<_Tp, false, _Copy, _Move>::~_Optional_payload() [with _Tp = arma::Col<double>; bool _Copy = false; bool _Move = false]’ at /usr/include/c++/14/optional:437:65, inlined from ‘std::_Optional_base<arma::Col<double>, false, false>::~_Optional_base()’ at /usr/include/c++/14/optional:508:12, inlined from ‘constexpr std::optional<_Tp>::optional(std::optional<_Up>&&) [with _Up = arma::Op<arma::Col<double>, arma::op_htrans2>; typename std::enable_if<__and_v<std::__not_<std::is_same<_T1, _U1> >, std::is_constructible<_T1, _U1>, std::is_convertible<_U1, _T1>, std::__not_<std::__or_<std::is_constructible<_Tp, const std::optional<_Up>&>, std::is_constructible<_Tp, std::optional<_Up>&>, std::is_constructible<_Tp, const std::optional<_Up>&&>, std::is_constructible<_Tp, std::optional<_Up>&&>, std::is_convertible<const std::optional<_Up>&, _Tp>, std::is_convertible<std::optional<_Up>&, _Tp>, std::is_convertible<const std::optional<_Up>&&, _Tp>, std::is_convertible<std::optional<_Up>&&, _Tp> > > >, bool>::type <anonymous> = true; _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:795:2, inlined from ‘void Kriging::update(const arma::vec&, const arma::mat&, bool)’ at /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp:1867:20: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/armadillo/tmp/include/armadillo_bits/Mat_meat.hpp:32:20: warning: ‘((const double**)((char*)&<unnamed> + offsetof(Parameters, KrigingParameters::beta.std::optional<arma::Col<double> >::<unnamed>.std::_Optional_base<arma::Col<double>, false, false>::_M_payload.std::_Optional_payload<arma::Col<double>, false, false, false>::<unnamed>.std::_Optional_payload<arma::Col<double>, true, false, false>::<unnamed>.std::_Optional_payload_base<arma::Col<double> >::_M_payload)))[4]’ may be used uninitialized [-Wmaybe-uninitialized] 32 | memory::release( access::rw(mem) ); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp: In member function ‘void Kriging::update(const arma::vec&, const arma::mat&, bool)’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp:1872:36: note: ‘<anonymous>’ declared here 1872 | false}; | ^ In destructor ‘arma::Mat<eT>::~Mat() [with eT = double]’, inlined from ‘arma::Col<double>::~Col()’ at /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/armadillo/tmp/include/armadillo_bits/Col_bones.hpp:25:7, inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_destroy() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:283:35, inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:314:14, inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:311:7, inlined from ‘std::_Optional_payload<_Tp, false, _Copy, _Move>::~_Optional_payload() [with _Tp = arma::Col<double>; bool _Copy = false; bool _Move = false]’ at /usr/include/c++/14/optional:437:65, inlined from ‘std::_Optional_base<arma::Col<double>, false, false>::~_Optional_base()’ at /usr/include/c++/14/optional:508:12, inlined from ‘constexpr std::optional<_Tp>::optional(std::optional<_Up>&&) [with _Up = arma::eOp<arma::Col<double>, arma::eop_scalar_times>; typename std::enable_if<__and_v<std::__not_<std::is_same<_T1, _U1> >, std::is_constructible<_T1, _U1>, std::is_convertible<_U1, _T1>, std::__not_<std::__or_<std::is_constructible<_Tp, const std::optional<_Up>&>, std::is_constructible<_Tp, std::optional<_Up>&>, std::is_constructible<_Tp, const std::optional<_Up>&&>, std::is_constructible<_Tp, std::optional<_Up>&&>, std::is_convertible<const std::optional<_Up>&, _Tp>, std::is_convertible<std::optional<_Up>&, _Tp>, std::is_convertible<const std::optional<_Up>&&, _Tp>, std::is_convertible<std::optional<_Up>&&, _Tp> > > >, bool>::type <anonymous> = true; _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:795:2, inlined from ‘void Kriging::update(const arma::vec&, const arma::mat&, bool)’ at /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp:1882:18: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/armadillo/tmp/include/armadillo_bits/Mat_meat.hpp:29:6: warning: ‘*(arma::Mat<double>*)((char*)&<unnamed> + offsetof(Parameters, KrigingParameters::beta.std::optional<arma::Col<double> >::<unnamed>.std::_Optional_base<arma::Col<double>, false, false>::<unnamed>)).arma::Mat<double>::n_alloc’ may be used uninitialized [-Wmaybe-uninitialized] 29 | if(n_alloc > 0) | ^~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp: In member function ‘void Kriging::update(const arma::vec&, const arma::mat&, bool)’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp:1887:34: note: ‘<anonymous>’ declared here 1887 | false}; | ^ In destructor ‘arma::Mat<eT>::~Mat() [with eT = double]’, inlined from ‘arma::Col<double>::~Col()’ at /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/armadillo/tmp/include/armadillo_bits/Col_bones.hpp:25:7, inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_destroy() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:283:35, inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:314:14, inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:311:7, inlined from ‘std::_Optional_payload<_Tp, false, _Copy, _Move>::~_Optional_payload() [with _Tp = arma::Col<double>; bool _Copy = false; bool _Move = false]’ at /usr/include/c++/14/optional:437:65, inlined from ‘std::_Optional_base<arma::Col<double>, false, false>::~_Optional_base()’ at /usr/include/c++/14/optional:508:12, inlined from ‘constexpr std::optional<_Tp>::optional(std::optional<_Up>&&) [with _Up = arma::eOp<arma::Col<double>, arma::eop_scalar_times>; typename std::enable_if<__and_v<std::__not_<std::is_same<_T1, _U1> >, std::is_constructible<_T1, _U1>, std::is_convertible<_U1, _T1>, std::__not_<std::__or_<std::is_constructible<_Tp, const std::optional<_Up>&>, std::is_constructible<_Tp, std::optional<_Up>&>, std::is_constructible<_Tp, const std::optional<_Up>&&>, std::is_constructible<_Tp, std::optional<_Up>&&>, std::is_convertible<const std::optional<_Up>&, _Tp>, std::is_convertible<std::optional<_Up>&, _Tp>, std::is_convertible<const std::optional<_Up>&&, _Tp>, std::is_convertible<std::optional<_Up>&&, _Tp> > > >, bool>::type <anonymous> = true; _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:795:2, inlined from ‘void Kriging::update(const arma::vec&, const arma::mat&, bool)’ at /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp:1882:18: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/armadillo/tmp/include/armadillo_bits/Mat_meat.hpp:32:20: warning: ‘((const double**)((char*)&<unnamed> + offsetof(Parameters, KrigingParameters::beta.std::optional<arma::Col<double> >::<unnamed>.std::_Optional_base<arma::Col<double>, false, false>::_M_payload.std::_Optional_payload<arma::Col<double>, false, false, false>::<unnamed>.std::_Optional_payload<arma::Col<double>, true, false, false>::<unnamed>.std::_Optional_payload_base<arma::Col<double> >::_M_payload)))[4]’ may be used uninitialized [-Wmaybe-uninitialized] 32 | memory::release( access::rw(mem) ); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp: In member function ‘void Kriging::update(const arma::vec&, const arma::mat&, bool)’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/Kriging.cpp:1887:34: note: ‘<anonymous>’ declared here 1887 | false}; | ^ [ 68%] Building CXX object src/lib/CMakeFiles/Kriging.dir/NuggetKriging.cpp.o /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/NuggetKriging.cpp: In member function ‘NuggetKriging::KModel NuggetKriging::make_Model(const arma::vec&, double, std::map<std::__cxx11::basic_string<char>, double>*) const’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:123:15: warning: unused variable ‘d’ [-Wunused-variable] 123 | arma::uword d = m_X.n_cols; | ^ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/NuggetKriging.cpp: In member function ‘void NuggetKriging::fit(const arma::vec&, const arma::mat&, const Trend::RegressionModel&, bool, const std::string&, const std::string&, const Parameters&)’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:904:31: warning: comparison of integer expressions of different signedness: ‘arma::uword’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 904 | for (arma::uword i = 0; i < multistart; i++) { | ~~^~~~~~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/NuggetKriging.cpp: In member function ‘arma::mat NuggetKriging::update_simulate(const arma::vec&, const arma::mat&)’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:1408:15: warning: unused variable ‘d’ [-Wunused-variable] 1408 | arma::uword d = m_X.n_cols; | ^ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:1412:15: warning: unused variable ‘n_on’ [-Wunused-variable] 1412 | arma::uword n_on = n_o + n_n; | ^~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/NuggetKriging.cpp: In member function ‘double NuggetKriging::_logMargPost(const arma::vec&, arma::vec*, KModel*, std::map<std::__cxx11::basic_string<char>, double>*) const’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:433:23: warning: ‘_sigma2’ may be used uninitialized [-Wmaybe-uninitialized] 433 | double log_S_2 = log(_sigma2 * (n - p)); | ~~~^~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:370:10: note: ‘_sigma2’ was declared here 370 | double _sigma2; | ^~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:447:48: warning: ‘_nugget’ may be used uninitialized [-Wmaybe-uninitialized] 447 | double t = arma::accu(CL / _theta) + _nugget / _sigma2; | ~~~~~~~~^~~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:371:10: note: ‘_nugget’ was declared here 371 | double _nugget; | ^~~~~~~ [ 72%] Building CXX object src/lib/CMakeFiles/Kriging.dir/NoiseKriging.cpp.o /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/NoiseKriging.cpp: In member function ‘NoiseKriging::KModel NoiseKriging::make_Model(const arma::vec&, double, std::map<std::__cxx11::basic_string<char>, double>*) const’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:121:15: warning: unused variable ‘d’ [-Wunused-variable] 121 | arma::uword d = m_X.n_cols; | ^ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/NoiseKriging.cpp: In member function ‘void NoiseKriging::fit(const arma::vec&, const arma::vec&, const arma::mat&, const Trend::RegressionModel&, bool, const std::string&, const std::string&, const Parameters&)’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:516:31: warning: comparison of integer expressions of different signedness: ‘arma::uword’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 516 | for (arma::uword i = 0; i < multistart; i++) { | ~~^~~~~~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:605:50: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 605 | || (sol_to_b < arma::datum::eps) && (result.num_iters <= 2) // we fastly converged to one bound | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/NoiseKriging.cpp: In member function ‘arma::mat NoiseKriging::update_simulate(const arma::vec&, const arma::vec&, const arma::mat&)’: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:1000:15: warning: unused variable ‘d’ [-Wunused-variable] 1000 | arma::uword d = m_X.n_cols; | ^ /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:1004:15: warning: unused variable ‘n_on’ [-Wunused-variable] 1004 | arma::uword n_on = n_o + n_n; | ^~~~ [ 75%] Building CXX object src/lib/CMakeFiles/Kriging.dir/KrigingLoader.cpp.o [ 79%] Building CXX object src/lib/CMakeFiles/Kriging.dir/lkalloc.cpp.o [ 82%] Building CXX object src/lib/CMakeFiles/Kriging.dir/Bench.cpp.o [ 86%] Building CXX object src/lib/CMakeFiles/Kriging.dir/CacheFunction.cpp.o [ 89%] Building CXX object src/lib/CMakeFiles/Kriging.dir/utils/base64.cpp.o [ 93%] Building CXX object src/lib/CMakeFiles/Kriging.dir/utils/jsonutils.cpp.o [ 96%] Building CXX object src/lib/CMakeFiles/Kriging.dir/__/__/version.cpp.o [100%] Linking CXX static library libKriging.a make[4]: Leaving directory '/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build' [100%] Built target Kriging make[4]: Entering directory '/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build' make[4]: Leaving directory '/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build' make[4]: Entering directory '/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build' -- Install configuration: "Release" -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/glue_cor_meat.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/fn_randi.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/op_sp_plus_bones.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/op_strans_bones.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/SpOp_meat.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/mul_syrk.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/op_powmat_bones.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/running_stat_bones.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/SpMat_meat.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/glue_cor_bones.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/fn_interp1.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/def_atlas.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/op_roots_meat.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/glue_join_meat.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/op_all_bones.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/mtOpCube_bones.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/op_dot_bones.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/op_prod_bones.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/op_flip_bones.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/arma_rng_cxx03.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/fn_log_normpdf.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/Gen_meat.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/hdf5_name.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/SizeCube_meat.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/GlueCube_meat.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/spop_diagmat_meat.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/op_rank_meat.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/mtSpOp_bones.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/op_pinv_bones.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/fn_trace.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/distr_param.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/Col_bones.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/op_cov_bones.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/config.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/op_diagmat_meat.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/spop_symmat_bones.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/fn_intersect.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/glue_kron_bones.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/op_cond_meat.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/SpRow_meat.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/fn_lu.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/spglue_minus_bones.hpp -- Installing: /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/libK/build/installed/include/armadillo_bits/SpSubview_meat.hpp -- Installing: 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You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > Rcpp::compileAttributes(pkgdir = '.', verbose = TRUE) Exports from /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/kriging_binding.cpp: Rcpp::List new_Kriging(std::string kernel) Rcpp::List new_KrigingFit(arma::vec y, arma::mat X, std::string kernel, std::string regmodel = "constant", bool normalize = false, std::string optim = "BFGS", std::string objective = "LL", Rcpp::Nullable<Rcpp::List> parameters = R_NilValue) void kriging_fit(Rcpp::List k, arma::vec y, arma::mat X, std::string regmodel = "constant", bool normalize = false, std::string optim = "BFGS", std::string objective = "LL", Rcpp::Nullable<Rcpp::List> parameters = R_NilValue) Rcpp::List kriging_copy(Rcpp::List k) Rcpp::List kriging_model(Rcpp::List k) std::string kriging_summary(Rcpp::List k) Rcpp::List kriging_predict(Rcpp::List k, arma::mat X_n, bool return_stdev = true, bool return_cov = false, bool return_deriv = false) arma::mat kriging_simulate(Rcpp::List k, int nsim, int seed, arma::mat X_n, bool will_update = false) arma::mat kriging_update_simulate(Rcpp::List k, arma::vec y_u, arma::mat X_u) void kriging_update(Rcpp::List k, arma::vec y_u, arma::mat X_u, bool refit = true) void kriging_save(Rcpp::List k, std::string filename) arma::mat kriging_covMat(Rcpp::List k, arma::mat X1, arma::mat X2) Rcpp::List kriging_logLikelihoodFun(Rcpp::List k, arma::vec theta, bool return_grad = false, bool return_hess = false, bool bench = false) double kriging_logLikelihood(Rcpp::List k) Rcpp::List kriging_leaveOneOutFun(Rcpp::List k, arma::vec theta, bool return_grad = false, bool bench = false) Rcpp::List kriging_leaveOneOutVec(Rcpp::List k, arma::vec theta) double kriging_leaveOneOut(Rcpp::List k) Rcpp::List kriging_logMargPostFun(Rcpp::List k, arma::vec theta, bool return_grad = false, bool bench = false) double kriging_logMargPost(Rcpp::List k) std::string kriging_kernel(Rcpp::List k) std::string kriging_optim(Rcpp::List k) std::string kriging_objective(Rcpp::List k) arma::mat kriging_X(Rcpp::List k) arma::vec kriging_centerX(Rcpp::List k) arma::vec kriging_scaleX(Rcpp::List k) arma::vec kriging_y(Rcpp::List k) double kriging_centerY(Rcpp::List k) double kriging_scaleY(Rcpp::List k) bool kriging_normalize(Rcpp::List k) std::string kriging_regmodel(Rcpp::List k) arma::mat kriging_F(Rcpp::List k) arma::mat kriging_T(Rcpp::List k) arma::mat kriging_M(Rcpp::List k) arma::vec kriging_z(Rcpp::List k) arma::vec kriging_beta(Rcpp::List k) bool kriging_is_beta_estim(Rcpp::List k) arma::vec kriging_theta(Rcpp::List k) bool kriging_is_theta_estim(Rcpp::List k) double kriging_sigma2(Rcpp::List k) bool kriging_is_sigma2_estim(Rcpp::List k) Exports from /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/linalg.cpp: double linalg_get_num_nugget() void linalg_set_num_nugget(double nugget) void linalg_check_chol_rcond(bool cr) bool linalg_chol_rcond_checked() arma::mat linalg_chol_safe(arma::mat X) void linalg_set_chol_warning(bool warn) double linalg_rcond_approx_chol(arma::mat X) double linalg_rcond_chol(arma::mat X) arma::mat linalg_chol_block(arma::mat C, arma::mat Loo) Exports from /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/load.cpp: Rcpp::List kriging_load(std::string filename) Rcpp::List noisekriging_load(std::string filename) Rcpp::List nuggetkriging_load(std::string filename) std::string class_saved(std::string filename) Exports from /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/noisekriging_binding.cpp: Rcpp::List new_NoiseKriging(std::string kernel) Rcpp::List new_NoiseKrigingFit(arma::vec y, arma::vec noise, arma::mat X, std::string kernel, std::string regmodel = "constant", bool normalize = false, std::string optim = "BFGS", std::string objective = "LL", Rcpp::Nullable<Rcpp::List> parameters = R_NilValue) void noisekriging_fit(Rcpp::List k, arma::vec y, arma::vec noise, arma::mat X, std::string regmodel = "constant", bool normalize = false, std::string optim = "BFGS", std::string objective = "LL", Rcpp::Nullable<Rcpp::List> parameters = R_NilValue) Rcpp::List noisekriging_copy(Rcpp::List k) Rcpp::List noisekriging_model(Rcpp::List k) std::string noisekriging_summary(Rcpp::List k) Rcpp::List noisekriging_predict(Rcpp::List k, arma::mat X_n, bool return_stdev = true, bool return_cov = false, bool return_deriv = false) arma::mat noisekriging_simulate(Rcpp::List k, int nsim, int seed, arma::mat X_n, arma::vec with_noise, bool will_update = false) arma::mat noisekriging_update_simulate(Rcpp::List k, arma::vec y_u, arma::vec noise_u, arma::mat X_u) void noisekriging_update(Rcpp::List k, arma::vec y_u, arma::vec noise_u, arma::mat X_u, bool refit = true) void noisekriging_save(Rcpp::List k, std::string filename) arma::mat noisekriging_covMat(Rcpp::List k, arma::mat X1, arma::mat X2) Rcpp::List noisekriging_logLikelihoodFun(Rcpp::List k, arma::vec theta_sigma2, bool return_grad = false, bool bench = false) double noisekriging_logLikelihood(Rcpp::List k) std::string noisekriging_kernel(Rcpp::List k) std::string noisekriging_optim(Rcpp::List k) std::string noisekriging_objective(Rcpp::List k) arma::mat noisekriging_X(Rcpp::List k) arma::vec noisekriging_centerX(Rcpp::List k) arma::vec noisekriging_scaleX(Rcpp::List k) arma::vec noisekriging_y(Rcpp::List k) arma::vec noisekriging_noise(Rcpp::List k) double noisekriging_centerY(Rcpp::List k) double noisekriging_scaleY(Rcpp::List k) bool noisekriging_normalize(Rcpp::List k) std::string noisekriging_regmodel(Rcpp::List k) arma::mat noisekriging_F(Rcpp::List k) arma::mat noisekriging_T(Rcpp::List k) arma::mat noisekriging_M(Rcpp::List k) arma::vec noisekriging_z(Rcpp::List k) arma::vec noisekriging_beta(Rcpp::List k) bool noisekriging_is_beta_estim(Rcpp::List k) arma::vec noisekriging_theta(Rcpp::List k) bool noisekriging_is_theta_estim(Rcpp::List k) double noisekriging_sigma2(Rcpp::List k) bool noisekriging_is_sigma2_estim(Rcpp::List k) Exports from /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/nuggetkriging_binding.cpp: Rcpp::List new_NuggetKriging(std::string kernel) Rcpp::List new_NuggetKrigingFit(arma::vec y, arma::mat X, std::string kernel, std::string regmodel = "constant", bool normalize = false, std::string optim = "BFGS", std::string objective = "LL", Rcpp::Nullable<Rcpp::List> parameters = R_NilValue) void nuggetkriging_fit(Rcpp::List k, arma::vec y, arma::mat X, std::string regmodel = "constant", bool normalize = false, std::string optim = "BFGS", std::string objective = "LL", Rcpp::Nullable<Rcpp::List> parameters = R_NilValue) Rcpp::List nuggetkriging_copy(Rcpp::List k) Rcpp::List nuggetkriging_model(Rcpp::List k) std::string nuggetkriging_summary(Rcpp::List k) Rcpp::List nuggetkriging_predict(Rcpp::List k, arma::mat X_n, bool return_stdev = true, bool return_cov = false, bool return_deriv = false) arma::mat nuggetkriging_simulate(Rcpp::List k, int nsim, int seed, arma::mat X_n, bool with_nugget = true, bool will_update = false) arma::mat nuggetkriging_update_simulate(Rcpp::List k, arma::vec y_u, arma::mat X_u) void nuggetkriging_update(Rcpp::List k, arma::vec y_u, arma::mat X_u, bool refit = true) void nuggetkriging_save(Rcpp::List k, std::string filename) arma::mat nuggetkriging_covMat(Rcpp::List k, arma::mat X1, arma::mat X2) Rcpp::List nuggetkriging_logLikelihoodFun(Rcpp::List k, arma::vec theta_alpha, bool return_grad = false, bool bench = false) double nuggetkriging_logLikelihood(Rcpp::List k) Rcpp::List nuggetkriging_logMargPostFun(Rcpp::List k, arma::vec theta, bool return_grad = false, bool bench = false) double nuggetkriging_logMargPost(Rcpp::List k) std::string nuggetkriging_kernel(Rcpp::List k) std::string nuggetkriging_optim(Rcpp::List k) std::string nuggetkriging_objective(Rcpp::List k) arma::mat nuggetkriging_X(Rcpp::List k) arma::vec nuggetkriging_centerX(Rcpp::List k) arma::vec nuggetkriging_scaleX(Rcpp::List k) arma::vec nuggetkriging_y(Rcpp::List k) double nuggetkriging_centerY(Rcpp::List k) double nuggetkriging_scaleY(Rcpp::List k) bool nuggetkriging_normalize(Rcpp::List k) std::string nuggetkriging_regmodel(Rcpp::List k) arma::mat nuggetkriging_F(Rcpp::List k) arma::mat nuggetkriging_T(Rcpp::List k) arma::mat nuggetkriging_M(Rcpp::List k) arma::vec nuggetkriging_z(Rcpp::List k) arma::vec nuggetkriging_beta(Rcpp::List k) bool nuggetkriging_is_beta_estim(Rcpp::List k) arma::vec nuggetkriging_theta(Rcpp::List k) bool nuggetkriging_is_theta_estim(Rcpp::List k) double nuggetkriging_sigma2(Rcpp::List k) bool nuggetkriging_is_sigma2_estim(Rcpp::List k) double nuggetkriging_nugget(Rcpp::List k) bool nuggetkriging_is_nugget_estim(Rcpp::List k) Exports from /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/optim.cpp: bool optim_is_reparametrized() void optim_use_reparametrize(bool reparametrize) double optim_get_theta_lower_factor() void optim_set_theta_lower_factor(double theta_lower_factor) double optim_get_theta_upper_factor() void optim_set_theta_upper_factor(double theta_upper_factor) bool optim_variogram_bounds_heuristic_used() void optim_use_variogram_bounds_heuristic(bool variogram_bounds_heuristic) void optim_log(int l) int optim_get_max_iteration() void optim_set_max_iteration(int max_iteration) double optim_get_gradient_tolerance() void optim_set_gradient_tolerance(double gradient_tolerance) double optim_get_objective_rel_tolerance() void optim_set_objective_rel_tolerance(double objective_rel_tolerance) Exports from /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/random.cpp: void random_reset_seed(unsigned int seed) double random_randu() arma::vec random_randu_vec(unsigned int n) arma::mat random_randu_mat(unsigned int n, unsigned int d) arma::mat random_randn_mat(unsigned int n, unsigned int d) /home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/R/RcppExports.R updated. > > ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I"/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I"/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c kriging_binding.cpp -o kriging_binding.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I"/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c linalg.cpp -o linalg.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I"/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c load.cpp -o load.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I"/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c noisekriging_binding.cpp -o noisekriging_binding.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I"/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c nuggetkriging_binding.cpp -o nuggetkriging_binding.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I"/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c optim.cpp -o optim.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I"/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c random.cpp -o random.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -Wl,-O1 -o rlibkriging.so RcppExports.o kriging_binding.o linalg.o load.o noisekriging_binding.o nuggetkriging_binding.o optim.o random.o -fopenmp -L/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src/../inst//lib -lKriging -larmadillo -llbfgsb_cpp /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/liblapack.so /usr/lib/x86_64-linux-gnu/libarpack.so -llapack -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpOi2p9K/R.INSTALL382da6ddf35e5/rlibkriging/src' installing to /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/00LOCK-rlibkriging/00new/rlibkriging/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rlibkriging)