* using log directory ‘/home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/reutils.Rcheck’ * using R version 4.4.3 (2025-02-28) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc-14 (Debian 14.2.0-16) 14.2.0 GNU Fortran (Debian 14.2.0-16) 14.2.0 * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘reutils/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘reutils’ version ‘0.2.3’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘reutils’ can be installed ... OK See 'https://www.r-project.org/nosvn/R.check/r-release-linux-x86_64/reutils-00install.html' for details. * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/1s] OK * checking whether the package can be loaded with stated dependencies ... [0s/1s] OK * checking whether the package can be unloaded cleanly ... [0s/1s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/1s] OK * checking whether the namespace can be unloaded cleanly ... [1s/1s] OK * checking loading without being on the library search path ... [0s/1s] OK * checking whether startup messages can be suppressed ... [0s/1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [9s/12s] OK * checking Rd files ... [1s/1s] NOTE checkRd: (-1) elink.Rd:70-71: Lost braces in \itemize; meant \describe ? checkRd: (-1) elink.Rd:72-73: Lost braces in \itemize; meant \describe ? checkRd: (-1) elink.Rd:74-76: Lost braces in \itemize; meant \describe ? checkRd: (-1) reutils-package.Rd:114: Lost braces 114 | code{reutils.test.remote} to \code{TRUE} to run the full suite of tests. | ^ * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... [1s/136s] OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed espell 0.190 0.032 15.316 ecitmatch 0.020 0.000 20.048 esummary 0.015 0.001 20.032 epost 0.007 0.006 20.053 esearch 0.012 0.001 15.001 elink 0.011 0.002 14.982 egquery 0.012 0.000 15.009 reutils-package 0.011 0.000 14.982 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [2s/2s] OK Running ‘test-all.R’ [1s/1s] * checking PDF version of manual ... [7s/9s] OK * checking HTML version of manual ... [2s/3s] OK * checking for non-standard things in the check directory ... OK * DONE Status: 1 NOTE