- using R version 4.4.2 (2024-10-31)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-14 (Debian 14.2.0-6) 14.2.0
GNU Fortran (Debian 14.2.0-6) 14.2.0
- running under: Debian GNU/Linux trixie/sid
- using session charset: UTF-8
- checking for file ‘modelSSE/DESCRIPTION’ ... OK
- this is package ‘modelSSE’ version ‘0.1-3’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘modelSSE’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/1s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the package can be unloaded cleanly ... [0s/0s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
- checking loading without being on the library search path ... [0s/0s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [5s/7s] OK
- checking Rd files ... [1s/1s] NOTE
checkRd: (-1) convert.epipara.to.delappara.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) convert.epipara.to.delappara.Rd:23: Lost braces in \itemize; meant \describe ?
checkRd: (-1) convert.epipara.to.delappara.Rd:24: Lost braces in \itemize; meant \describe ?
checkRd: (-1) convert.epipara.to.delappara.Rd:25: Lost braces in \itemize; meant \describe ?
checkRd: (-1) convert.epipara.to.delappara.Rd:40: Lost braces in \itemize; meant \describe ?
checkRd: (-1) convert.epipara.to.delappara.Rd:41: Lost braces in \itemize; meant \describe ?
checkRd: (-1) convert.epipara.to.delappara.Rd:42: Lost braces in \itemize; meant \describe ?
checkRd: (-1) convert.epipara.to.delappara.Rd:43: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_nextgenclusterdistn.Rd:58: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_nextgenclusterdistn.Rd:59: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_nextgenclusterdistn.Rd:60: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_nextgenclusterdistn.Rd:61: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_nextgenclusterdistn.Rd:80: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) d_nextgenclusterdistn.Rd:81: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) d_nextgenclusterdistn.Rd:82: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) d_nextgenclusterdistn.Rd:83: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) d_offspringdistn.Rd:50: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_offspringdistn.Rd:51: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_offspringdistn.Rd:52: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_offspringdistn.Rd:53: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_offspringdistn.Rd:84: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_offspringdistn.Rd:85: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_offspringdistn.Rd:86: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_offspringdistn.Rd:87: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_offspringdistn.Rd:72: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) d_offspringdistn.Rd:73: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) d_offspringdistn.Rd:74: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) d_offspringdistn.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) d_outbreakdistn.Rd:59: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_outbreakdistn.Rd:60: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_outbreakdistn.Rd:61: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_outbreakdistn.Rd:62: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_outbreakdistn.Rd:86: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) d_outbreakdistn.Rd:87: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) d_outbreakdistn.Rd:88: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) d_outbreakdistn.Rd:89: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) d_reproductiondistn.Rd:26: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_reproductiondistn.Rd:27: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_reproductiondistn.Rd:28: Lost braces in \itemize; meant \describe ?
checkRd: (-1) d_reproductiondistn.Rd:29: Lost braces in \itemize; meant \describe ?
checkRd: (-1) mpox_19801984_DRC.Rd:28: Lost braces in \itemize; meant \describe ?
checkRd: (-1) mpox_19801984_DRC.Rd:29: Lost braces in \itemize; meant \describe ?
checkRd: (-1) mpox_19801984_DRC.Rd:30: Lost braces in \itemize; meant \describe ?
checkRd: (-1) mpox_19801984_DRC.Rd:15: Lost braces in \itemize; meant \describe ?
checkRd: (-1) mpox_19801984_DRC.Rd:16: Lost braces in \itemize; meant \describe ?
checkRd: (-1) mpox_19801984_DRC.Rd:17: Lost braces in \itemize; meant \describe ?
checkRd: (-1) overalllikelihood.Rd:25: Lost braces in \itemize; meant \describe ?
checkRd: (-1) overalllikelihood.Rd:26: Lost braces in \itemize; meant \describe ?
checkRd: (-1) overalllikelihood.Rd:27: Lost braces in \itemize; meant \describe ?
checkRd: (-1) overalllikelihood.Rd:28: Lost braces in \itemize; meant \describe ?
checkRd: (-1) paraest.MCMC.Rd:31: Lost braces in \itemize; meant \describe ?
checkRd: (-1) paraest.MCMC.Rd:32: Lost braces in \itemize; meant \describe ?
checkRd: (-1) paraest.MCMC.Rd:33: Lost braces in \itemize; meant \describe ?
checkRd: (-1) paraest.MCMC.Rd:34: Lost braces in \itemize; meant \describe ?
checkRd: (-1) paraest.MCMC.Rd:59: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) paraest.MCMC.Rd:60: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) paraest.MCMC.Rd:61: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) paraest.ML.Rd:28: Lost braces in \itemize; meant \describe ?
checkRd: (-1) paraest.ML.Rd:29: Lost braces in \itemize; meant \describe ?
checkRd: (-1) paraest.ML.Rd:30: Lost braces in \itemize; meant \describe ?
checkRd: (-1) paraest.ML.Rd:31: Lost braces in \itemize; meant \describe ?
checkRd: (-1) paraest.ML.Rd:58: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) paraest.ML.Rd:59: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) paraest.ML.Rd:60: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) tailoffspringQ.Rd:33: Lost braces in \itemize; meant \describe ?
checkRd: (-1) tailoffspringQ.Rd:34: Lost braces in \itemize; meant \describe ?
checkRd: (-1) tailoffspringQ.Rd:35: Lost braces in \itemize; meant \describe ?
checkRd: (-1) tailoffspringQ.Rd:36: Lost braces in \itemize; meant \describe ?
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/0s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking examples ... [1s/1s] OK
- checking PDF version of manual ... [5s/7s] OK
- checking HTML version of manual ... [1s/2s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 NOTE