- using R version 4.4.2 (2024-10-31)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-14 (Debian 14.2.0-16) 14.2.0
GNU Fortran (Debian 14.2.0-16) 14.2.0
- running under: Debian GNU/Linux trixie/sid
- using session charset: UTF-8
- checking for file ‘mlr3pipelines/DESCRIPTION’ ... OK
- this is package ‘mlr3pipelines’ version ‘0.7.1’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘mlr3pipelines’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [1s/1s] OK
- checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the package can be unloaded cleanly ... [1s/1s] OK
- checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
- checking loading without being on the library search path ... [1s/1s] OK
- checking whether startup messages can be suppressed ... [1s/1s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [85s/133s] OK
- checking Rd files ... [4s/5s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [43s/69s] OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
mlr_pipeops_nmf 3.766 0.070 6.493
mlr_graphs_ovr 3.649 0.060 6.983
mlr_pipeops_tunethreshold 3.254 0.053 5.936
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [14m/10m] ERROR
Running ‘testthat.R’ [14m/10m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> if (requireNamespace("testthat", quietly = TRUE)) {
+ library("checkmate")
+ library("testthat")
+ library("mlr3")
+ library("paradox")
+ library("mlr3pipelines")
+ test_check("mlr3pipelines")
+ }
Starting 2 test processes
Superclass process has cloneable=FALSE, but subclass r_session has cloneable=TRUE. A subclass cannot be cloneable when its superclass is not cloneable, so cloning will be disabled for r_session.
Superclass process has cloneable=FALSE, but subclass r_session has cloneable=TRUE. A subclass cannot be cloneable when its superclass is not cloneable, so cloning will be disabled for r_session.
[ FAIL 1 | WARN 0 | SKIP 90 | PASS 12843 ]
══ Skipped tests (90) ══════════════════════════════════════════════════════════
• On CRAN (87): 'test_CnfFormula_simplify.R:6:3', 'test_CnfFormula.R:591:3',
'test_Graph.R:281:3', 'test_dictionary.R:7:3',
'test_learner_weightedaverage.R:5:3', 'test_learner_weightedaverage.R:57:3',
'test_learner_weightedaverage.R:105:3',
'test_learner_weightedaverage.R:152:3', 'test_meta.R:39:3',
'test_GraphLearner.R:5:3', 'test_GraphLearner.R:212:3',
'test_GraphLearner.R:334:3', 'test_GraphLearner.R:399:3',
'test_mlr_graphs_branching.R:26:3', 'test_mlr_graphs_bagging.R:6:3',
'test_mlr_graphs_robustify.R:5:3', 'test_pipeop_adas.R:8:3',
'test_pipeop_blsmote.R:8:3', 'test_pipeop_branch.R:4:3',
'test_pipeop_chunk.R:4:3', 'test_pipeop_classbalancing.R:10:3',
'test_pipeop_classweights.R:10:3', 'test_pipeop_boxcox.R:9:3',
'test_pipeop_colapply.R:9:3', 'test_pipeop_copy.R:5:3',
'test_pipeop_colroles.R:10:3', 'test_pipeop_encode.R:21:3',
'test_pipeop_encodeimpact.R:11:3', 'test_pipeop_encodelmer.R:15:3',
'test_pipeop_encodelmer.R:38:3', 'test_pipeop_encodelmer.R:81:3',
'test_pipeop_datefeatures.R:13:3', 'test_pipeop_featureunion.R:9:3',
'test_pipeop_featureunion.R:134:3', 'test_pipeop_filter.R:7:3',
'test_pipeop_fixfactors.R:9:3', 'test_pipeop_histbin.R:9:3',
'test_pipeop_ensemble.R:6:3', 'test_pipeop_ica.R:7:3',
'test_pipeop_impute.R:4:3', 'test_pipeop_kernelpca.R:9:3',
'test_pipeop_imputelearner.R:43:3', 'test_pipeop_learner.R:17:3',
'test_pipeop_learnercv.R:31:3', 'test_pipeop_missind.R:6:3',
'test_pipeop_modelmatrix.R:7:3', 'test_pipeop_multiplicityexply.R:9:3',
'test_pipeop_multiplicityimply.R:9:3', 'test_pipeop_mutate.R:9:3',
'test_pipeop_nearmiss.R:7:3', 'test_pipeop_nmf.R:9:3',
'test_pipeop_ovr.R:9:3', 'test_pipeop_ovr.R:48:3', 'test_pipeop_pca.R:8:3',
'test_pipeop_proxy.R:14:3', 'test_pipeop_quantilebin.R:5:3',
'test_pipeop_randomprojection.R:8:3', 'test_pipeop_randomresponse.R:5:3',
'test_pipeop_removeconstants.R:10:3', 'test_pipeop_renamecolumns.R:11:3',
'test_pipeop_replicate.R:9:3', 'test_pipeop_rowapply.R:9:3',
'test_pipeop_scale.R:8:3', 'test_pipeop_scale.R:18:3',
'test_pipeop_scalemaxabs.R:7:3', 'test_pipeop_scalerange.R:8:3',
'test_pipeop_select.R:9:3', 'test_pipeop_smote.R:10:3',
'test_pipeop_smotenc.R:8:3', 'test_pipeop_spatialsign.R:7:3',
'test_pipeop_subsample.R:10:3', 'test_pipeop_targetinvert.R:4:3',
'test_pipeop_targetmutate.R:5:3', 'test_pipeop_targettrafo.R:4:3',
'test_pipeop_targettrafoscalerange.R:5:3', 'test_pipeop_task_preproc.R:4:3',
'test_pipeop_task_preproc.R:14:3', 'test_pipeop_textvectorizer.R:38:3',
'test_pipeop_textvectorizer.R:190:3', 'test_pipeop_tomek.R:7:3',
'test_pipeop_tunethreshold.R:111:3', 'test_pipeop_tunethreshold.R:191:3',
'test_pipeop_unbranch.R:10:3', 'test_pipeop_updatetarget.R:89:3',
'test_pipeop_vtreat.R:9:3', 'test_pipeop_yeojohnson.R:8:3',
'test_typecheck.R:188:3'
• Skipping (1): 'test_GraphLearner.R:1265:3'
• empty test (2): 'test_pipeop_missind.R:101:1', 'test_ppl.R:61:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_dictionary.R:251:3'): Cannot add pipeops with keys that invalidates the convenience for id incrementation ──
Error in ``$.R6`(mlr_pipeops, clone)`: R6 class DictionaryPipeOp/Dictionary/R6 does not have slot 'clone'!
Backtrace:
▆
1. ├─mlr_pipeops$clone at test_dictionary.R:251:3
2. └─global `$.R6`(mlr_pipeops, clone) at test_dictionary.R:251:3
[ FAIL 1 | WARN 0 | SKIP 90 | PASS 12843 ]
Error: Test failures
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [4s/7s] OK
- checking PDF version of manual ... [26s/42s] OK
- checking HTML version of manual ... [17s/22s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 ERROR