- using R version 4.4.1 (2024-06-14)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-13 (Debian 13.3.0-1) 13.3.0
GNU Fortran (Debian 13.3.0-1) 13.3.0
- running under: Debian GNU/Linux trixie/sid
- using session charset: UTF-8
- checking for file ‘metajam/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘metajam’ version ‘0.3.0’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘metajam’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [4s/6s] OK
- checking whether the package can be loaded with stated dependencies ... [3s/5s] OK
- checking whether the package can be unloaded cleanly ... [3s/5s] OK
- checking whether the namespace can be loaded with stated dependencies ... [3s/3s] OK
- checking whether the namespace can be unloaded cleanly ... [4s/5s] OK
- checking loading without being on the library search path ... [4s/5s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [18s/25s] OK
- checking Rd files ... [0s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [5s/6s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [24s/49s] ERROR
Running ‘testthat.R’ [24s/48s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(metajam)
>
> test_check("metajam")
[ FAIL 1 | WARN 0 | SKIP 14 | PASS 34 ]
══ Skipped tests (14) ══════════════════════════════════════════════════════════
• On CRAN (14): 'test-check_version.R:13:3', 'test-download_d1_data.R:15:3',
'test-download_d1_data.R:36:3', 'test-download_d1_data.R:57:3',
'test-download_d1_data.R:79:3', 'test-download_d1_data.R:96:3',
'test-download_d1_data.R:117:3', 'test-download_d1_data.R:138:3',
'test-download_d1_data.R:161:3', 'test-download_d1_data_pkg.R:16:3',
'test-download_d1_data_pkg.R:28:3', 'test-get_pkg_pids.R:5:3',
'test-read_d1_files.R:28:3', 'test-read_d1_files.R:50:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-download_ISO_data.R:13:3'): test data URL with ISO metadata from Research Workspace member node and with multiple data tables ──
Error in `.local(x, ...)`: get() error: Error in if (node@APIversion >= "v2") {: argument is of length zero
Backtrace:
▆
1. ├─dataone::getObject(d1c@mn, meta_id) at test-download_ISO_data.R:13:3
2. └─dataone::getObject(d1c@mn, meta_id)
3. └─dataone (local) .local(x, ...)
[ FAIL 1 | WARN 0 | SKIP 14 | PASS 34 ]
Error: Test failures
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [22s/31s] OK
- checking PDF version of manual ... [5s/8s] OK
- checking HTML version of manual ... [0s/1s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 ERROR