- using R version 4.4.1 (2024-06-14)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-13 (Debian 13.2.0-25) 13.2.0
GNU Fortran (Debian 13.2.0-25) 13.2.0
- running under: Debian GNU/Linux trixie/sid
- using session charset: UTF-8
- checking for file ‘kDGLM/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘kDGLM’ version ‘1.2.0’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘kDGLM’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [1s/1s] OK
- checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the package can be unloaded cleanly ... [1s/1s] OK
- checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
- checking loading without being on the library search path ... [1s/1s] OK
- checking whether startup messages can be suppressed ... [1s/1s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [31s/37s] OK
- checking Rd files ... [3s/3s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/1s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [22s/26s] OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
fit_model 5.851 0.015 6.532
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [93s/374s] ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘example1.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/example1_files/figure-html/unnamed-chunk-2-1.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 14175 bytes
Input file size = 15045 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12898
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 12849
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 12712
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 12670
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 12670
Output IDAT size = 12670 bytes (1505 bytes decrease)
Output file size = 12748 bytes (2297 bytes = 15.27% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/example1_files/figure-html/unnamed-chunk-6-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 26737 bytes
Input file size = 26851 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21013
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21013
Output IDAT size = 21013 bytes (5724 bytes decrease)
Output file size = 21091 bytes (5760 bytes = 21.45% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/example1_files/figure-html/unnamed-chunk-9-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31958 bytes
Input file size = 32072 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25910
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25910
Output IDAT size = 25910 bytes (6048 bytes decrease)
Output file size = 25988 bytes (6084 bytes = 18.97% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/example1_files/figure-html/unnamed-chunk-12-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 30732 bytes
Input file size = 30846 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24543
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24543
Output IDAT size = 24543 bytes (6189 bytes decrease)
Output file size = 24621 bytes (6225 bytes = 20.18% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/example1_files/figure-html/unnamed-chunk-15-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31552 bytes
Input file size = 31666 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25440
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25440
Output IDAT size = 25440 bytes (6112 bytes decrease)
Output file size = 25518 bytes (6148 bytes = 19.42% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/example1_files/figure-html/unnamed-chunk-16-1.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 11325 bytes
Input file size = 12195 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10091
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10091
Output IDAT size = 10091 bytes (1234 bytes decrease)
Output file size = 10169 bytes (2026 bytes = 16.61% decrease)
Quitting from lines 330-363 [unnamed-chunk-17] (example1.Rmd)
Error: processing vignette 'example1.Rmd' failed with diagnostics:
no applicable method for 'left_join' applied to an object of class "NULL"
--- failed re-building ‘example1.Rmd’
--- re-building ‘fitting.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/fitting_files/figure-html/unnamed-chunk-4-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 30839 bytes
Input file size = 30953 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24415
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24415
Output IDAT size = 24415 bytes (6424 bytes decrease)
Output file size = 24493 bytes (6460 bytes = 20.87% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/fitting_files/figure-html/unnamed-chunk-7-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 36214 bytes
Input file size = 36340 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 30984
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 30984
Output IDAT size = 30984 bytes (5230 bytes decrease)
Output file size = 31062 bytes (5278 bytes = 14.52% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/fitting_files/figure-html/unnamed-chunk-8-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 23167 bytes
Input file size = 23269 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18993
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18993
Output IDAT size = 18993 bytes (4174 bytes decrease)
Output file size = 19071 bytes (4198 bytes = 18.04% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/fitting_files/figure-html/unnamed-chunk-9-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 29382 bytes
Input file size = 29496 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23552
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23552
Output IDAT size = 23552 bytes (5830 bytes decrease)
Output file size = 23630 bytes (5866 bytes = 19.89% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/fitting_files/figure-html/unnamed-chunk-13-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 46679 bytes
Input file size = 46817 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 37401
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 37401
Output IDAT size = 37401 bytes (9278 bytes decrease)
Output file size = 37479 bytes (9338 bytes = 19.95% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/fitting_files/figure-html/unnamed-chunk-16-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 30610 bytes
Input file size = 30724 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24247
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24247
Output IDAT size = 24247 bytes (6363 bytes decrease)
Output file size = 24325 bytes (6399 bytes = 20.83% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/fitting_files/figure-html/unnamed-chunk-17-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31365 bytes
Input file size = 31479 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24809
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24809
Output IDAT size = 24809 bytes (6556 bytes decrease)
Output file size = 24887 bytes (6592 bytes = 20.94% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/fitting_files/figure-html/unnamed-chunk-26-1.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7742 bytes
Input file size = 8600 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6613
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6613
Output IDAT size = 6613 bytes (1129 bytes decrease)
Output file size = 6691 bytes (1909 bytes = 22.20% decrease)
--- finished re-building ‘fitting.Rmd’
--- re-building ‘intro.Rmd’ using rmarkdown
--- finished re-building ‘intro.Rmd’
--- re-building ‘outcomes.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/outcomes_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 30290 bytes
Input file size = 30404 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23774
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23774
Output IDAT size = 23774 bytes (6516 bytes decrease)
Output file size = 23852 bytes (6552 bytes = 21.55% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/outcomes_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 32146 bytes
Input file size = 32260 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25358
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25358
Output IDAT size = 25358 bytes (6788 bytes decrease)
Output file size = 25436 bytes (6824 bytes = 21.15% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/outcomes_files/figure-html/unnamed-chunk-7-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 48660 bytes
Input file size = 48798 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 35633
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 35633
Output IDAT size = 35633 bytes (13027 bytes decrease)
Output file size = 35711 bytes (13087 bytes = 26.82% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/outcomes_files/figure-html/unnamed-chunk-8-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 28123 bytes
Input file size = 28237 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 22401
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 22401
Output IDAT size = 22401 bytes (5722 bytes decrease)
Output file size = 22479 bytes (5758 bytes = 20.39% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/outcomes_files/figure-html/unnamed-chunk-10-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 30839 bytes
Input file size = 30953 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24415
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24415
Output IDAT size = 24415 bytes (6424 bytes decrease)
Output file size = 24493 bytes (6460 bytes = 20.87% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/outcomes_files/figure-html/unnamed-chunk-12-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 28440 bytes
Input file size = 28554 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 22216
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 22216
Output IDAT size = 22216 bytes (6224 bytes decrease)
Output file size = 22294 bytes (6260 bytes = 21.92% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/outcomes_files/figure-html/unnamed-chunk-14-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 69569 bytes
Input file size = 69743 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56241
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56241
Output IDAT size = 56241 bytes (13328 bytes decrease)
Output file size = 56319 bytes (13424 bytes = 19.25% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/outcomes_files/figure-html/unnamed-chunk-16-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 32296 bytes
Input file size = 32410 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27480
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27480
Output IDAT size = 27480 bytes (4816 bytes decrease)
Output file size = 27558 bytes (4852 bytes = 14.97% decrease)
--- finished re-building ‘outcomes.Rmd’
--- re-building ‘structures.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/structures_files/figure-html/unnamed-chunk-6-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 24989 bytes
Input file size = 25103 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19190
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19190
Output IDAT size = 19190 bytes (5799 bytes decrease)
Output file size = 19268 bytes (5835 bytes = 23.24% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/structures_files/figure-html/unnamed-chunk-10-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 38623 bytes
Input file size = 38749 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 30647
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 30647
Output IDAT size = 30647 bytes (7976 bytes decrease)
Output file size = 30725 bytes (8024 bytes = 20.71% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/structures_files/figure-html/unnamed-chunk-14-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 26468 bytes
Input file size = 26582 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21256
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21256
Output IDAT size = 21256 bytes (5212 bytes decrease)
Output file size = 21334 bytes (5248 bytes = 19.74% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/structures_files/figure-html/unnamed-chunk-17-1.png
672x960 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 45596 bytes
Input file size = 46514 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42560
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 41850
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 41850
Output IDAT size = 41850 bytes (3746 bytes decrease)
Output file size = 41928 bytes (4586 bytes = 9.86% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/structures_files/figure-html/unnamed-chunk-20-1.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 19399 bytes
Input file size = 20281 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18207
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 17914
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 14645
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 14598
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 14598
Output IDAT size = 14598 bytes (4801 bytes decrease)
Output file size = 14676 bytes (5605 bytes = 27.64% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/structures_files/figure-html/unnamed-chunk-21-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 29505 bytes
Input file size = 29619 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23738
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23738
Output IDAT size = 23738 bytes (5767 bytes decrease)
Output file size = 23816 bytes (5803 bytes = 19.59% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/structures_files/figure-html/unnamed-chunk-22-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 29344 bytes
Input file size = 29458 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23732
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23732
Output IDAT size = 23732 bytes (5612 bytes decrease)
Output file size = 23810 bytes (5648 bytes = 19.17% decrease)
--- finished re-building ‘structures.Rmd’
SUMMARY: processing the following file failed:
‘example1.Rmd’
Error: Vignette re-building failed.
Execution halted
- checking PDF version of manual ... [12s/15s] OK
- checking HTML version of manual ... [4s/6s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 ERROR