• using R version 4.4.2 (2024-10-31)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-14 (Debian 14.2.0-6) 14.2.0     GNU Fortran (Debian 14.2.0-6) 14.2.0
• running under: Debian GNU/Linux trixie/sid
• using session charset: UTF-8
• checking for file ‘genetics/DESCRIPTION’ ... OK
• this is package ‘genetics’ version ‘1.3.8.1.3’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘genetics’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/1s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/1s] OK
• checking whether startup messages can be suppressed ... [0s/0s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [9s/12s] OK
• checking Rd files ... [1s/1s] NOTE checkRd: (-1) LD.Rd:37-46: Lost braces in \itemize; meant \describe ? checkRd: (-1) LD.Rd:47-64: Lost braces in \itemize; meant \describe ? checkRd: (-1) LD.Rd:66-73: Lost braces in \itemize; meant \describe ? checkRd: (-1) LD.Rd:78-79: Lost braces in \itemize; meant \describe ? checkRd: (-1) LD.Rd:80-81: Lost braces in \itemize; meant \describe ? checkRd: (-1) LD.Rd:82-83: Lost braces in \itemize; meant \describe ? checkRd: (-1) LD.Rd:84-85: Lost braces in \itemize; meant \describe ? checkRd: (-1) LD.Rd:86-87: Lost braces in \itemize; meant \describe ? checkRd: (-1) diseq.Rd:48-58: Lost braces in \itemize; meant \describe ? checkRd: (-1) diseq.Rd:59-76: Lost braces in \itemize; meant \describe ? checkRd: (-1) diseq.Rd:78-87: Lost braces in \itemize; meant \describe ? checkRd: (-1) diseq.Rd:93-94: Lost braces in \itemize; meant \describe ? checkRd: (-1) diseq.Rd:95-96: Lost braces in \itemize; meant \describe ? checkRd: (-1) diseq.Rd:97-98: Lost braces in \itemize; meant \describe ? checkRd: (-1) diseq.Rd:124: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) diseq.Rd:125: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) diseq.Rd:126-128: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) diseq.Rd:129: Lost braces in \itemize; \value handles \item{}{} directly
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking data for ASCII and uncompressed saves ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking examples ... [14s/17s] OK Examples with CPU (user + system) or elapsed time > 5s           user system elapsed HWE.test 6.003 0.016 7.165 print.LD 5.104 0.008 5.754
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [1s/2s] OK   Running ‘ci.balance.R’ [0s/0s]   Running ‘makeGenotype_with_sep.R’ [0s/0s]   Running ‘test.NA.R’ [0s/1s]
• checking PDF version of manual ... [6s/8s] OK
• checking HTML version of manual ... [2s/3s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 NOTE