- using R version 4.4.2 (2024-10-31)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-14 (Debian 14.2.0-12) 14.2.0
GNU Fortran (Debian 14.2.0-12) 14.2.0
- running under: Debian GNU/Linux trixie/sid
- using session charset: UTF-8
- checking for file ‘escalation/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘escalation’ version ‘0.1.10’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘escalation’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [6s/7s] OK
- checking whether the package can be loaded with stated dependencies ... [5s/7s] OK
- checking whether the package can be unloaded cleanly ... [5s/6s] OK
- checking whether the namespace can be loaded with stated dependencies ... [5s/7s] OK
- checking whether the namespace can be unloaded cleanly ... [6s/8s] OK
- checking loading without being on the library search path ... [10s/11s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [39s/47s] OK
- checking Rd files ... [1s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [30s/39s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [468s/571s] ERROR
Running ‘testthat.R’ [467s/571s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(escalation)
Loading required package: magrittr
Attaching package: 'magrittr'
The following objects are masked from 'package:testthat':
equals, is_less_than, not
>
> test_check("escalation")
[ FAIL 1 | WARN 798 | SKIP 0 | PASS 15722 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_correlated_patient_sample.R:104:3'): CorrelatedPatientSample works like it should. ──
cor(tox_events, eff_events) is not strictly less than 0. Difference: 0
[ FAIL 1 | WARN 798 | SKIP 0 | PASS 15722 ]
Error: Test failures
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [249s/334s] OK
- checking PDF version of manual ... [8s/12s] OK
- checking HTML version of manual ... [5s/8s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 ERROR