* using log directory ‘/home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/chem.databases.Rcheck’
* using R version 4.4.2 (2024-10-31)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc-14 (Debian 14.2.0-16) 14.2.0
    GNU Fortran (Debian 14.2.0-16) 14.2.0
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘chem.databases/DESCRIPTION’ ... OK
* this is package ‘chem.databases’ version ‘1.0.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘chem.databases’ can be installed ... OK
See 'https://www.r-project.org/nosvn/R.check/r-release-linux-x86_64/chem.databases-00install.html' for details.
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [0s/0s] OK
* checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the package can be unloaded cleanly ... [0s/0s] OK
* checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
* checking loading without being on the library search path ... [0s/0s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [3s/4s] OK
* checking Rd files ... [0s/1s] NOTE
checkRd: (-1) atsdr_tsca_ld50_a.Rd:10: Lost braces
    10 | item{CAS}{Chemical Abstracts Service (CAS) Registry Number}
       |     ^
checkRd: (-1) atsdr_tsca_ld50_a.Rd:10: Lost braces
    10 | item{CAS}{Chemical Abstracts Service (CAS) Registry Number}
       |          ^
checkRd: (-1) atsdr_tsca_ld50_a.Rd:11: Lost braces
    11 | item{Substance Name}{Preferred Chemical Substance Name}
       |     ^
checkRd: (-1) atsdr_tsca_ld50_a.Rd:11: Lost braces
    11 | item{Substance Name}{Preferred Chemical Substance Name}
       |                     ^
checkRd: (-1) atsdr_tsca_ld50_a.Rd:12: Lost braces
    12 | item{Registry Name}{Registry Chemical Name}
       |     ^
checkRd: (-1) atsdr_tsca_ld50_a.Rd:12: Lost braces
    12 | item{Registry Name}{Registry Chemical Name}
       |                    ^
checkRd: (-1) atsdr_tsca_ld50_a.Rd:13: Lost braces
    13 | item{SMILES}{Simplified Molecular-Input Line-Entry System (SMILES) Chemical Structural Notation}
       |     ^
checkRd: (-1) atsdr_tsca_ld50_a.Rd:13: Lost braces
    13 | item{SMILES}{Simplified Molecular-Input Line-Entry System (SMILES) Chemical Structural Notation}
       |             ^
checkRd: (-1) atsdr_tsca_ld50_b.Rd:10: Lost braces
    10 | item{CAS}{Chemical Abstracts Service (CAS) Registry Number}
       |     ^
checkRd: (-1) atsdr_tsca_ld50_b.Rd:10: Lost braces
    10 | item{CAS}{Chemical Abstracts Service (CAS) Registry Number}
       |          ^
checkRd: (-1) atsdr_tsca_ld50_b.Rd:11: Lost braces
    11 | item{Substance Name}{Preferred Chemical Substance Name}
       |     ^
checkRd: (-1) atsdr_tsca_ld50_b.Rd:11: Lost braces
    11 | item{Substance Name}{Preferred Chemical Substance Name}
       |                     ^
checkRd: (-1) atsdr_tsca_ld50_b.Rd:12: Lost braces
    12 | item{Registry Name}{Registry Chemical Name}
       |     ^
checkRd: (-1) atsdr_tsca_ld50_b.Rd:12: Lost braces
    12 | item{Registry Name}{Registry Chemical Name}
       |                    ^
checkRd: (-1) atsdr_tsca_ld50_b.Rd:13: Lost braces
    13 | item{SMILES}{Simplified Molecular-Input Line-Entry System (SMILES) Chemical Structural Notation}
       |     ^
checkRd: (-1) atsdr_tsca_ld50_b.Rd:13: Lost braces
    13 | item{SMILES}{Simplified Molecular-Input Line-Entry System (SMILES) Chemical Structural Notation}
       |             ^
checkRd: (-1) chem_wiki.Rd:10: Lost braces
    10 | item{CAS}{Chemical Abstracts Service (CAS) Registry Number}
       |     ^
checkRd: (-1) chem_wiki.Rd:10: Lost braces
    10 | item{CAS}{Chemical Abstracts Service (CAS) Registry Number}
       |          ^
checkRd: (-1) chem_wiki.Rd:11: Lost braces
    11 | item{Substance Name}{Preferred Chemical Substance Name}
       |     ^
checkRd: (-1) chem_wiki.Rd:11: Lost braces
    11 | item{Substance Name}{Preferred Chemical Substance Name}
       |                     ^
checkRd: (-1) chem_wiki.Rd:12: Lost braces
    12 | item{IUPAC Name}{IUPAC Chemical Name}
       |     ^
checkRd: (-1) chem_wiki.Rd:12: Lost braces
    12 | item{IUPAC Name}{IUPAC Chemical Name}
       |                 ^
checkRd: (-1) chem_wiki.Rd:13: Lost braces
    13 | item{Molecular Formula}{Chemical Molecular Formula}
       |     ^
checkRd: (-1) chem_wiki.Rd:13: Lost braces
    13 | item{Molecular Formula}{Chemical Molecular Formula}
       |                        ^
checkRd: (-1) chem_wiki.Rd:14: Lost braces
    14 | item{SMILES}{Simplified Molecular-Input Line-Entry System (SMILES) Chemical Structural Notation}
       |     ^
checkRd: (-1) chem_wiki.Rd:14: Lost braces
    14 | item{SMILES}{Simplified Molecular-Input Line-Entry System (SMILES) Chemical Structural Notation}
       |             ^
checkRd: (-1) chem_wiki.Rd:15: Lost braces
    15 | item{InChI}{International Chemical Identifier (InChI) Chemical Structural Notation}
       |     ^
checkRd: (-1) chem_wiki.Rd:15: Lost braces
    15 | item{InChI}{International Chemical Identifier (InChI) Chemical Structural Notation}
       |            ^
checkRd: (-1) chem_wiki.Rd:16: Lost braces
    16 | item{InChIKey}{Hashed Version of the InChI}
       |     ^
checkRd: (-1) chem_wiki.Rd:16: Lost braces
    16 | item{InChIKey}{Hashed Version of the InChI}
       |               ^
checkRd: (-1) chem_wiki.Rd:17: Lost braces
    17 | item{Average Mass}{Average Chemical Molecular Mass}
       |     ^
checkRd: (-1) chem_wiki.Rd:17: Lost braces
    17 | item{Average Mass}{Average Chemical Molecular Mass}
       |                   ^
checkRd: (-1) chem_wiki.Rd:18: Lost braces
    18 | item{Monoisotopic Mass}{Single Chemical Isotope Mass}
       |     ^
checkRd: (-1) chem_wiki.Rd:18: Lost braces
    18 | item{Monoisotopic Mass}{Single Chemical Isotope Mass}
       |                        ^
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... [2s/2s] OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... NONE
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [1s/1s] OK
  Running ‘spelling.R’ [0s/0s]
* checking PDF version of manual ... [4s/5s] OK
* checking HTML version of manual ... [0s/1s] OK
* checking for non-standard things in the check directory ... OK
* DONE
Status: 1 NOTE