* installing to library ‘/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages’ * installing *source* package ‘TFMPvalue’ ... ** package ‘TFMPvalue’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’ using C++11 make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp7u0fmS/R.INSTALL33a2471c37fcff/TFMPvalue/src' g++-14 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ArgumentException.cpp -o ArgumentException.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c FileException.cpp -o FileException.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Matrix.cpp -o Matrix.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ParseException.cpp -o ParseException.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c TFMMain.cpp -o TFMMain.o TFMMain.cpp: In function ‘SEXPREC* pv2sc(SEXP, SEXP, SEXP, SEXP)’: TFMMain.cpp:159:8: warning: unused variable ‘sortColumns’ [-Wunused-variable] 159 | bool sortColumns = false; | ^~~~~~~~~~~ gcc-14 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c TFMPvalue_init.c -o TFMPvalue_init.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c TFMpvalue.cpp -o TFMpvalue.o TFMpvalue.cpp: In function ‘void testLazyDistrib(Matrix, double, double)’: TFMpvalue.cpp:119:13: warning: unused variable ‘totalSize’ [-Wunused-variable] 119 | qlonglong totalSize = 0; | ^~~~~~~~~ TFMpvalue.cpp:120:13: warning: unused variable ‘totalOp’ [-Wunused-variable] 120 | qlonglong totalOp = 0; | ^~~~~~~ TFMpvalue.cpp: In function ‘void testFastPvalue(Matrix, double, double)’: TFMpvalue.cpp:185:13: warning: unused variable ‘totalSize’ [-Wunused-variable] 185 | qlonglong totalSize = 0; | ^~~~~~~~~ TFMpvalue.cpp:186:13: warning: unused variable ‘totalOp’ [-Wunused-variable] 186 | qlonglong totalOp = 0; | ^~~~~~~ TFMpvalue.cpp:190:10: warning: unused variable ‘pvalue’ [-Wunused-variable] 190 | double pvalue = m.fastPvalue(&m,(qlonglong)(score * m.granularity + m.offset)); | ^~~~~~ g++-14 -std=gnu++11 -shared -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -Wl,-O1 -o TFMPvalue.so ArgumentException.o FileException.o Matrix.o ParseException.o TFMMain.o TFMPvalue_init.o TFMpvalue.o -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp7u0fmS/R.INSTALL33a2471c37fcff/TFMPvalue/src' make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp7u0fmS/R.INSTALL33a2471c37fcff/TFMPvalue/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp7u0fmS/R.INSTALL33a2471c37fcff/TFMPvalue/src' installing to /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/00LOCK-TFMPvalue/00new/TFMPvalue/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (TFMPvalue)