* installing to library ‘/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages’
* installing *source* package ‘SFSI’ ...
** package ‘SFSI’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpfjtdaO/R.INSTALL31d53b18f362d2/SFSI/src'
gcc-14 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c c_functions.c -o c_functions.o
c_functions.c: In function ‘R_readBinFile’:
c_functions.c:380:9: warning: ‘type’ may be used uninitialized [-Wmaybe-uninitialized]
380 | Rprintf(" Data type: %s\n",type);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
c_functions.c:230:11: note: ‘type’ was declared here
230 | char *type;
| ^~~~
gcc-14 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c c_cov2cor.c -o c_cov2cor.o
gcc-14 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c c_cov2dist.c -o c_cov2dist.o
gcc-14 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c c_lars.c -o c_lars.o
gcc-14 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c c_solveEN.c -o c_solveEN.o
gcc-14 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c c_solveEN_sparse.c -o c_solveEN_sparse.o
gcc-14 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c c_blup.c -o c_blup.o
gcc-14 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c c_prune.c -o c_prune.o
gcc-14 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o
gcc-14 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utils.c -o utils.o
gcc-14 -shared -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -Wl,-O1 -o SFSI.so c_functions.o c_cov2cor.o c_cov2dist.o c_lars.o c_solveEN.o c_solveEN_sparse.o c_blup.o c_prune.o init.o utils.o -llapack -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpfjtdaO/R.INSTALL31d53b18f362d2/SFSI/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpfjtdaO/R.INSTALL31d53b18f362d2/SFSI/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpfjtdaO/R.INSTALL31d53b18f362d2/SFSI/src'
installing to /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/00LOCK-SFSI/00new/SFSI/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SFSI)