* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘wrProteo’ ... ** package ‘wrProteo’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘wrProteo’ finding HTML links ... done AAmass html AucROC html VolcanoPlotW2 html cleanListCoNames html combineMultFilterNAimput html convAASeq2mass html corColumnOrder html countNoOfCommonPeptides html dot-atomicMasses html dot-checkKnitrProt html dot-checkSetupGroups html dot-commonSpecies html dot-extrSpecPref html dot-imputeNA html dot-plotQuantDistr html exportAsWombatP html exportSdrfDraft html extrSpeciesAnnot html extractTestingResults html foldChangeArrow2 html fuseProteomicsProjects html getUPS1acc html inspectSpeciesIndic html isolNAneighb html massDeFormula html matrixNAinspect html matrixNAneighbourImpute html plotROC html razorNoFilter html readAlphaPeptFile html readDiaNNFile html readDiaNNPeptides html readFasta2 html readFragpipeFile html readIonbotPeptides html readMassChroQFile html readMaxQuantFile html readMaxQuantPeptides html readOpenMSFile html readProlineFile html readProtDiscovFile html readProtDiscovPeptides html readProtDiscovererPeptides html readProteomeDiscovererFile html readProteomeDiscovererPeptides html readSampleMetaData html readSdrf html readUCSCtable html readUniProtExport html readWombatNormFile html removeSampleInList html replMissingProtNames html shortSoftwName html summarizeForROC html test2grp html testRobustToNAimputation html writeFasta2 html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (wrProteo)