* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘vanquish’ ...
** package ‘vanquish’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘vanquish’
    finding HTML links ... done
    config_df                               html  
    defcon                                  html  
    generate_feature                        html  
    getAlt2                                 html  
    getAnnoRate                             html  
    getAvgLL                                html  
    getLowDepth                             html  
    getRatio                                html  
    getSNVRate                              html  
    getSkewness                             html  
    getVar                                  html  
    locateFile                              html  
    negll                                   html  
    readGATK                                html  
    readStrelka                             html  
    readVarDict                             html  
    readVarPROWL                            html  
    read_vcf                                html  
    rho_est                                 html  
    rmCNVinVCF                              html  
    rmChangePoint                           html  
    summary_vcf                             html  
    svm_class_model                         html  
    svm_regression_model                    html  
    train_ct                                html  
    update_vcf                              html  
    vcf_example                             html  
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (vanquish)