* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘tmod’ ...
** package ‘tmod’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘tmod’
    finding HTML links ... done
    Egambia                                 html  
    cell_signatures                         html  
    check_tmod_gs                           html  
    eigengene                               html  
    evidencePlot                            html  
    filterGS                                html  
    getGenes                                html  
    getModuleMembers                        html  
    ggEvidencePlot                          html  
    ggPanelplot                             html  
    hgEnrichmentPlot                        html  
    makeTmodFromDataFrame                   html  
    modCorPlot                              html  
    modGroups                               html  
    modOverlaps                             html  
    modcors                                 html  
    modjaccard                              html  
    modmetabo                               html  
    pcaplot                                 html  
    pvalEffectPlot                          html  
    showGene                                html  
    simplePie                               html  
    tmod-data                               html  
    tmod-package                            html  
    tmod2DataFrame                          html  
    tmod2tmodGS                             html  
    tmodAUC                                 html  
    tmodDecideTests                         html  
    tmodGS-class                            html  
    tmodImportMSigDB                        html  
    tmodLEA                                 html  
    tmodLEASummary                          html  
    tmodLimmaDecideTests                    html  
    tmodLimmaTest                           html  
    tmodLimmaTopTable                       html  
    tmodPCA                                 html  
    tmodPal                                 html  
    tmodPanelPlot                           html  
    tmodSummary                             html  
    tmodTagcloud                            html  
    tmodUtest                               html  
    tmod_ids                                html  
    upset                                   html  
    vaccination                             html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (tmod)