* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘stm’ ...
** package ‘stm’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.3.0-1) 13.3.0’
using C++ compiler: ‘g++-13 (Debian 13.3.0-1) 13.3.0’
make[1]: Entering directory '/tmp/Rtmp6H3oXN/R.INSTALL16c1ff5a863dd4/stm/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c STMCfuns.cpp -o STMCfuns.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c init.c -o init.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o stm.so RcppExports.o STMCfuns.o init.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmp6H3oXN/R.INSTALL16c1ff5a863dd4/stm/src'
make[1]: Entering directory '/tmp/Rtmp6H3oXN/R.INSTALL16c1ff5a863dd4/stm/src'
make[1]: Leaving directory '/tmp/Rtmp6H3oXN/R.INSTALL16c1ff5a863dd4/stm/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-stm/00new/stm/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘stm’
    finding HTML links ... done
    alignCorpus                             html  
    asSTMCorpus                             html  
    calcfrex                                html  
    calclift                                html  
    calcscore                               html  
    checkBeta                               html  
    checkResiduals                          html  
    cloud                                   html  
    convertCorpus                           html  
    estimateEffect                          html  
    exclusivity                             html  
    findThoughts                            html  
    findTopic                               html  
    fitNewDocuments                         html  
    gadarian                                html  
    js.estimate                             html  
    labelTopics                             html  
    make.dt                                 html  
    make.heldout                            html  
    makeDesignMatrix                        html  
    manyTopics                              html  
    multiSTM                                html  
    optimizeDocument                        html  
    permutationTest                         html  
    plot.MultimodDiagnostic                 html  
    plot.STM                                html  
    plot.STMpermute                         html  
    plot.estimateEffect                     html  
    plot.searchK                            html  
    plot.topicCorr                          html  
    plotModels                              html  
    plotQuote                               html  
    plotRemoved                             html  
    plotTopicLoess                          html  
    poliblog5k                              html  
    prepDocuments                           html  
    readCorpus                              html  
    readLdac                                html  
    rmvnorm                                 html  
    s                                       html  
    sageLabels                              html  
    searchK                                 html  
    selectModel                             html  
    semanticCoherence                       html  
    stm-package                             html  
    stm                                     html  
    summary.STM                             html  
    summary.estimateEffect                  html  
    textProcessor                           html  
    thetaPosterior                          html  
    toLDAvis                                html  
    toLDAvisJson                            html  
    topicCorr                               html  
    topicLasso                              html  
    finding level-2 HTML links ... done

    topicQuality                            html  
    unpack.glmnet                           html  
    writeLdac                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (stm)