* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘stacomiR’ ...
** package ‘stacomiR’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘stacomiR’
    finding HTML links ... done
    barplot-report_annual-method            html  
    calcule-report_ge_weight-method         html  
    calcule-report_mig-method               html  
    calcule-report_mig_char-method          html  
    calcule-report_mig_env-method           html  
    calcule-report_mig_interannual-method   html  
    calcule-report_mig_mult-method          html  
    calcule-report_sample_char-method       html  
    calcule-report_sea_age-method           html  
    calcule-report_silver_eel-method        html  
    calcule-report_species-method           html  
    calcule                                 html  
    charge-ref_choice-method                html  
    charge-ref_coe-method                   html  
    charge-ref_dc-method                    html  
    charge-ref_df-method                    html  
    charge-ref_env-method                   html  
    charge-ref_list-method                  html  
    charge-ref_par-method                   html  
    charge-ref_parqual-method               html  
    charge-ref_parquan-method               html  
    charge-ref_stage-method                 html  
    charge-ref_taxa-method                  html  
    charge-ref_textbox-method               html  
    charge-ref_year-method                  html  
    charge-report_annual-method             html  
    charge-report_dc-method                 html  
    charge-report_df-method                 html  
    charge-report_env-method                html  
    charge-report_mig-method                html  
    charge-report_mig_char-method           html  
    charge-report_mig_env-method            html  
    charge-report_mig_interannual-method    html  
    charge-report_mig_mult-method           html  
    charge-report_ope-method                html  
    charge-report_sample_char-method        html  
    charge-report_sea_age-method            html  
    charge-report_silver_eel-method         html  
    charge-report_species-method            html  
    charge                                  html  
    charge_complement-ref_parqual-method    html  
    charge_complement                       html  
    charge_with_filter-ref_par-method       html  
    charge_with_filter-ref_parqual-method   html  
    charge_with_filter-ref_parquan-method   html  
    charge_with_filter-ref_stage-method     html  
    charge_with_filter-ref_taxa-method      html  
    charge_with_filter                      html  
    choice_c-ref_choice-method              html  
    choice_c-ref_dc-method                  html  
    choice_c-ref_df-method                  html  
    choice_c-ref_env-method                 html  
    choice_c-ref_horodate-method            html  
    choice_c-ref_list-method                html  
    choice_c-ref_par-method                 html  
    choice_c-ref_stage-method               html  
    choice_c-ref_taxa-method                html  
    choice_c-ref_textbox-method             html  
    choice_c-ref_timestep_daily-method      html  
    choice_c-ref_year-method                html  
    choice_c-report_annual-method           html  
    choice_c-report_dc-method               html  
    choice_c-report_df-method               html  
    choice_c-report_env-method              html  
    choice_c-report_ge_weight-method        html  
    choice_c-report_mig-method              html  
    choice_c-report_mig_char-method         html  
    choice_c-report_mig_env-method          html  
    choice_c-report_mig_interannual-method
                                            html  
    choice_c-report_mig_mult-method         html  
    choice_c-report_sample_char-method      html  
    choice_c-report_sea_age-method          html  
    choice_c-report_silver_eel-method       html  
    choice_c-report_species-method          html  
    choice_c                                html  
    coef_durif                              html  
    colortable                              html  
    connect-report_annual-method            html  
    connect-report_dc-method                html  
    connect-report_df-method                html  
    connect-report_env-method               html  
    connect-report_ge_weight-method         html  
    connect-report_mig-method               html  
    connect-report_mig_char-method          html  
    connect-report_mig_env-method           html  
    connect-report_mig_interannual-method   html  
    connect-report_mig_mult-method          html  
    connect-report_ope-method               html  
    connect-report_sample_char-method       html  
    connect-report_sea_age-method           html  
    connect-report_silver_eel-method        html  
    connect-report_species-method           html  
    end_date-ref_timestep-method            html  
    end_date                                html  
    envir_stacomi                           html  
    fn_connect_report_mig_interannual       html  
    fun_aggreg_for_plot                     html  
    fun_char_spe                            html  
    fun_date_extraction                     html  
    fun_report_mig_interannual              html  
    fun_report_mig_mult                     html  
    fun_report_mig_mult_overlaps            html  
    fun_schema                              html  
    fun_stage_durif                         html  
    fun_table_per_dis                       html  
    fun_weight_conversion                   html  
    fun_write_monthly                       html  
    funbarchart1DF                          html  
    funbarchartDF                           html  
    funboxDF                                html  
    funchartDF                              html  
    fungraph                                html  
    fungraph_glasseel                       html  
    funout                                  html  
    funplotreport_silver_eel                html  
    funstat                                 html  
    funtable                                html  
    funtableDF                              html  
    get_org                                 html  
    get_schema                              html  
    get_year-ref_timestep-method            html  
    get_year                                html  
    getvalue                                html  
    graphdate                               html  
    load_stacomi                            html  
    model-report_ge_weight-method           html  
    model                                   html  
    plot-report_annual-missing-method       html  
    plot-report_dc-missing-method           html  
    plot-report_df-missing-method           html  
    plot-report_env-missing-method          html  
    plot-report_ge_weight-missing-method    html  
    plot-report_mig-ANY-method              html  
    plot-report_mig_char-missing-method     html  
    plot-report_mig_env-missing-method      html  
    plot-report_mig_interannual-missing-method
                                            html  
    plot-report_mig_mult-missing-method     html  
    plot-report_sample_char-missing-method
                                            html  
    plot-report_sea_age-missing-method      html  
    plot-report_silver_eel-missing-method   html  
    plot-report_species-missing-method      html  
    print-report_dc-method                  html  
    print-report_df-method                  html  
    print-report_mig-method                 html  
    print-report_mig_mult-method            html  
    print-report_sample_char-method         html  
    print-report_sea_age-method             html  
    print-report_silver_eel-method          html  
    r_ann                                   html  
    r_ann_adour                             html  
    r_dc                                    html  
    r_df                                    html  
    r_env                                   html  
    r_gew                                   html  
    r_mig                                   html  
    r_mig_char                              html  
    r_mig_dc                                html  
    r_mig_df                                html  
    r_mig_env                               html  
    r_mig_interannual                       html  
    r_mig_interannual_vichy                 html  
    r_mig_mult                              html  
    r_mig_mult_dc                           html  
    r_mig_mult_df                           html  
    r_mig_mult_ope                          html  
    r_mig_ope                               html  
    r_sample_char                           html  
    r_seaa                                  html  
    r_silver                                html  
    ref_choice-class                        html  
    ref_coe-class                           html  
    ref_dc-class                            html  
    ref_df-class                            html  
    ref_env-class                           html  
    ref_horodate-class                      html  
    ref_list-class                          html  
    ref_par-class                           html  
    ref_parqual-class                       html  
    ref_parquan-class                       html  
    ref_stage-class                         html  
    ref_taxa-class                          html  
    ref_textbox-class                       html  
    ref_timestep-class                      html  
    ref_timestepChar-class                  html  
    ref_timestep_daily-class                html  
    ref_year-class                          html  
    report_annual-class                     html  
    report_dc-class                         html  
    report_df-class                         html  
    report_env-class                        html  
    report_ge_weight-class                  html  
    report_mig-class                        html  
    report_mig_char-class                   html  
    report_mig_env-class                    html  
    report_mig_interannual-class            html  
    report_mig_mult-class                   html  
    report_ope-class                        html  
    report_sample_char-class                html  
    report_sea_age-class                    html  
    report_silver_eel-class                 html  
    report_species-class                    html  
    setasqualitative-report_mig_char-method
                                            html  
    setasqualitative                        html  
    split_per_day                           html  
    stacomi                                 html  
    summary-report_dc-method                html  
    summary-report_df-method                html  
    summary-report_mig-method               html  
    summary-report_mig_char-method          html  
    summary-report_mig_interannual-method   html  
    summary-report_mig_mult-method          html  
    summary-report_sample_char-method       html  
    summary-report_sea_age-method           html  
    summary-report_silver_eel-method        html  
    summary-report_species-method           html  
    supprime-ref_coe-method                 html  
    supprime-report_mig_interannual-method
                                            html  
    supprime-report_sea_age-method          html  
    supprime                                html  
    validity_ref_horodate                   html  
    validity_year                           html  
    vector_to_listsql                       html  
    write_database-report_ge_weight-method
                                            html  
    write_database-report_mig-method        html  
    write_database-report_sea_age-method    html  
    write_database                          html  
    xtable-report_annual-method             html  
    xtable-report_mig_char-method           html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (stacomiR)