* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘spatstat.linnet’ ... ** package ‘spatstat.linnet’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-13 (Debian 13.3.0-1) 13.3.0’ make[1]: Entering directory '/tmp/RtmpVUJpS7/R.INSTALL2212ad76a1c613/spatstat.linnet/src' gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c depthrel.c -o depthrel.o gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c heatapprox.c -o heatapprox.o gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c linScrossdist.c -o linScrossdist.o gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c linSnncross.c -o linSnncross.o gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c linSpairdist.c -o linSpairdist.o gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lincrossdist.c -o lincrossdist.o gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lineardisc.c -o lineardisc.o gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c linearradius.c -o linearradius.o gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c linequad.c -o linequad.o gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c linknnd.c -o linknnd.o gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c linnncross.c -o linnncross.o gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c linnndist.c -o linnndist.o gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c linpairdist.c -o linpairdist.o gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lintileindex.c -o lintileindex.o gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c linvdist.c -o linvdist.o gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c linvknndist.c -o linvknndist.o gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lixel.c -o lixel.o gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o spatstat.linnet.so depthrel.o heatapprox.o init.o linScrossdist.o linSnncross.o linSpairdist.o lincrossdist.o lineardisc.o linearradius.o linequad.o linknnd.o linnncross.o linnndist.o linpairdist.o lintileindex.o linvdist.o linvknndist.o lixel.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR make[1]: Leaving directory '/tmp/RtmpVUJpS7/R.INSTALL2212ad76a1c613/spatstat.linnet/src' make[1]: Entering directory '/tmp/RtmpVUJpS7/R.INSTALL2212ad76a1c613/spatstat.linnet/src' make[1]: Leaving directory '/tmp/RtmpVUJpS7/R.INSTALL2212ad76a1c613/spatstat.linnet/src' installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-spatstat.linnet/00new/spatstat.linnet/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘spatstat.linnet’ finding HTML links ... done Extract.linim html Extract.linnet html Extract.lpp html Math.linim html Replace.linim html Smooth.lpp html Window.lpp html addVertices html affine.linnet html affine.lpp html anova.lppm html as.data.frame.lintess html as.linfun html as.linim html as.linnet.linim html as.linnet.psp html as.lpp html as.owin.lpp html auc.lpp html begins html berman.test.lpp html branchlabelfun html bw.lppl html bw.relrisk.lpp html bw.voronoi html cdf.test.lpp html chop.linnet html clickjoin html clicklpp html connected.linnet html connected.lpp html crossdist.lpp html crossing.linnet html cut.lpp html data.lppm html delaunayNetwork html deletebranch html density.linnet html density.lpp html densityEqualSplit html densityHeat.lpp html densityQuick.lpp html densityVoronoi.lpp html densityfun.lpp html diameter.linnet html distfun.lpp html distmap.lpp html divide.linnet html domain.lpp html envelope.lpp html eval.linim html fitted.lppm html heatkernelapprox html identify.lpp html insertVertices html integral.linim html intensity.lpp html intersect.lintess html is.connected.linnet html is.marked.lppm html is.multitype.lpp html is.multitype.lppm html is.stationary.lppm html joinVertices html linearJinhom html linearK html linearKEuclid html linearKEuclidInhom html linearKcross html linearKcross.inhom html linearKdot html linearKdot.inhom html linearKinhom html lineardirichlet html lineardisc html linearmarkconnect html linearmarkequal html linearpcf html linearpcfEuclid html linearpcfEuclidInhom html linearpcfcross html linearpcfcross.inhom html linearpcfdot html linearpcfdot.inhom html linearpcfinhom html lineartileindex html linequad html linfun html linim html linnet html lintess html lixellate html lpp html lppm html marks.linnet html marks.lintess html mean.linim html methods.linfun html methods.linim html methods.linnet html methods.lpp html methods.lppm html model.frame.lppm html model.images.lppm html model.matrix.lppm html nncross.lpp html nndist.lpp html nnfromvertex html nnfun.lpp html nnwhich.lpp html pairdist.lpp html pairs.linim html persp.linfun html persp.linim html plot.linim html plot.linnet html plot.lintess html plot.lpp html plot.lppm html points.lpp html predict.lppm html pseudoR2.lppm html rSwitzerlpp html rThomaslpp html rcelllpp html relrisk.lpp html repairNetwork html rhohat.lpp html rjitter.lpp html rlpp html roc.lpp html rpoislpp html runiflpp html sdr.lpp html simulate.lppm html spatstat.linnet-deprecated html spatstat.linnet-internal html spatstat.linnet-package html subset.lpp html superimpose.lpp html terminalvertices html text.lpp html thinNetwork html tile.lengths html tilenames.lintess html treebranchlabels html treeprune html unstack.lpp html ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (spatstat.linnet)