• using R version 4.4.2 Patched (2024-11-18 r87347)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-14 (Debian 14.2.0-8) 14.2.0     GNU Fortran (Debian 14.2.0-8) 14.2.0
• running under: Debian GNU/Linux trixie/sid
• using session charset: UTF-8
• checking for file ‘shinySbm/DESCRIPTION’ ... OK
• this is package ‘shinySbm’ version ‘0.1.5’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘shinySbm’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [3s/4s] OK
• checking whether the package can be loaded with stated dependencies ... [3s/4s] OK
• checking whether the package can be unloaded cleanly ... [3s/4s] OK
• checking whether the namespace can be loaded with stated dependencies ... [3s/4s] OK
• checking whether the namespace can be unloaded cleanly ... [3s/5s] OK
• checking loading without being on the library search path ... [4s/5s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [24s/31s] OK
• checking Rd files ... [1s/1s] NOTE checkRd: (-1) FungusTreeNetwork.Rd:15-21: Lost braces in \itemize; meant \describe ? checkRd: (-1) FungusTreeNetwork.Rd:22-28: Lost braces in \itemize; meant \describe ? checkRd: (-1) FungusTreeNetwork.Rd:33-34: Lost braces in \itemize; meant \describe ? checkRd: (-1) FungusTreeNetwork.Rd:33: Lost braces; missing escapes or markup?     33 | \item{tree_tree}{Results of \code{estimateSimpleSBM} for {sbm}        | ^ checkRd: (-1) FungusTreeNetwork.Rd:35-36: Lost braces in \itemize; meant \describe ? checkRd: (-1) FungusTreeNetwork.Rd:35: Lost braces; missing escapes or markup?     35 | \item{fungus_tree}{Results of \code{estimateBipartiteSBM} for {sbm}        | ^ checkRd: (-1) get_block.BipartiteSBM_fit.Rd:30: Lost braces; missing escapes or markup?     30 | A fct that return blocks attribution or probabilities for each nodes in a Sbm fit from the {sbm} package.        | ^ checkRd: (-1) get_block.Rd:36: Lost braces; missing escapes or markup?     36 | A fct that return blocks attribution or probabilities for each nodes in a Sbm fit from the {sbm} package.        | ^ checkRd: (-1) get_block.Rd:21: Lost braces in \itemize; meant \describe ? checkRd: (-1) get_block.Rd:22: Lost braces in \itemize; meant \describe ? checkRd: (-1) get_block.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) get_block.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) get_block.SimpleSBM_fit.Rd:30: Lost braces; missing escapes or markup?     30 | A fct that return blocks attribution or probabilities for each nodes in a Sbm fit from the {sbm} package.        | ^ checkRd: (-1) get_flextable.Rd:15: Lost braces; missing escapes or markup?     15 | \item{sbm}{an sbm model product of {sbm} estimation (simple or bipartite)}        | ^ checkRd: (-1) get_flextable.Rd:34: Lost braces in \itemize; meant \describe ? checkRd: (-1) get_flextable.Rd:35: Lost braces in \itemize; meant \describe ? checkRd: (-1) get_flextable.Rd:36: Lost braces in \itemize; meant \describe ? checkRd: (-1) get_flextable.Rd:42: Lost braces in \itemize; meant \describe ? checkRd: (-1) get_flextable.Rd:43: Lost braces in \itemize; meant \describe ? checkRd: (-1) get_flextable.Rd:44: Lost braces in \itemize; meant \describe ? checkRd: (-1) get_flextable.Rd:45: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.BipartiteSBM_fit.Rd:37: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.BipartiteSBM_fit.Rd:38: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.BipartiteSBM_fit.Rd:39: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.BipartiteSBM_fit.Rd:40: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.BipartiteSBM_fit.Rd:41: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.BipartiteSBM_fit.Rd:42: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.BipartiteSBM_fit.Rd:43: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.Rd:40: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.Rd:41: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.Rd:42: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.Rd:43: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.Rd:44: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.Rd:45: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.Rd:46: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.SimpleSBM_fit.Rd:37: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.SimpleSBM_fit.Rd:38: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.SimpleSBM_fit.Rd:39: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.SimpleSBM_fit.Rd:40: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.SimpleSBM_fit.Rd:41: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.SimpleSBM_fit.Rd:42: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.SimpleSBM_fit.Rd:43: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.matrix.Rd:37: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.matrix.Rd:38: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.matrix.Rd:39: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.matrix.Rd:40: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.matrix.Rd:41: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.matrix.Rd:42: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSbm.matrix.Rd:43: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.BipartiteSBM_fit.Rd:38: Lost braces; missing escapes or markup?     38 | A fct that plot a {visNetwork} plot of a adjacency matrix or an Sbm fit from the {sbm} package.        | ^ checkRd: (-1) visSbm.BipartiteSBM_fit.Rd:38: Lost braces; missing escapes or markup?     38 | A fct that plot a {visNetwork} plot of a adjacency matrix or an Sbm fit from the {sbm} package.        | ^ checkRd: (-1) visSbm.BipartiteSBM_fit.Rd:25: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.BipartiteSBM_fit.Rd:26: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.BipartiteSBM_fit.Rd:43-44: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.BipartiteSBM_fit.Rd:45: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.BipartiteSBM_fit.Rd:46: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.BipartiteSBM_fit.Rd:47: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.BipartiteSBM_fit.Rd:48: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.BipartiteSBM_fit.Rd:49: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.BipartiteSBM_fit.Rd:50: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.BipartiteSBM_fit.Rd:51: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.Rd:38: Lost braces; missing escapes or markup?     38 | A fct that plot a {visNetwork} plot of a adjacency matrix or an Sbm fit from the {sbm} package.        | ^ checkRd: (-1) visSbm.Rd:38: Lost braces; missing escapes or markup?     38 | A fct that plot a {visNetwork} plot of a adjacency matrix or an Sbm fit from the {sbm} package.        | ^ checkRd: (-1) visSbm.Rd:25: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.Rd:26: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.Rd:43-44: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.Rd:45: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.Rd:46: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.Rd:47: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.Rd:48: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.Rd:49: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.Rd:50: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.Rd:51: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.SimpleSBM_fit.Rd:38: Lost braces; missing escapes or markup?     38 | A fct that plot a {visNetwork} plot of a adjacency matrix or an Sbm fit from the {sbm} package.        | ^ checkRd: (-1) visSbm.SimpleSBM_fit.Rd:38: Lost braces; missing escapes or markup?     38 | A fct that plot a {visNetwork} plot of a adjacency matrix or an Sbm fit from the {sbm} package.        | ^ checkRd: (-1) visSbm.SimpleSBM_fit.Rd:25: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.SimpleSBM_fit.Rd:26: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.SimpleSBM_fit.Rd:43-44: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.SimpleSBM_fit.Rd:45: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.SimpleSBM_fit.Rd:46: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.SimpleSBM_fit.Rd:47: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.SimpleSBM_fit.Rd:48: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.SimpleSBM_fit.Rd:49: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.SimpleSBM_fit.Rd:50: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.SimpleSBM_fit.Rd:51: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.default.Rd:38: Lost braces; missing escapes or markup?     38 | A fct that plot a {visNetwork} plot of a adjacency matrix or an Sbm fit from the {sbm} package.        | ^ checkRd: (-1) visSbm.default.Rd:38: Lost braces; missing escapes or markup?     38 | A fct that plot a {visNetwork} plot of a adjacency matrix or an Sbm fit from the {sbm} package.        | ^ checkRd: (-1) visSbm.default.Rd:25: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.default.Rd:26: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.default.Rd:43-44: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.default.Rd:45: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.default.Rd:46: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.default.Rd:47: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.default.Rd:48: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.default.Rd:49: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.default.Rd:50: Lost braces in \itemize; meant \describe ? checkRd: (-1) visSbm.default.Rd:51: Lost braces in \itemize; meant \describe ?
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [3s/4s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [7s/9s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [8s/10s] OK   Running ‘spelling.R’ [0s/0s]   Running ‘testthat.R’ [7s/9s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [22s/24s] OK
• checking PDF version of manual ... [6s/8s] OK
• checking HTML version of manual ... [1s/2s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 NOTE