* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘scclust’ ... ** package ‘scclust’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpg0R4hG/R.INSTALL1990ce4db28aa2/scclust/src' gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Ilibscclust/include -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c error.c -o error.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Ilibscclust/include -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c hierarchical.c -o hierarchical.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Ilibscclust/include -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c internal.c -o internal.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Ilibscclust/include -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sc_clustering.c -o sc_clustering.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Ilibscclust/include -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c scclust-init.c -o scclust-init.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Ilibscclust/include -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utilities.c -o utilities.o (cd libscclust && R_AR="ar" R_CC="gcc-14" R_CPPFLAGS="-DNDEBUG -I/usr/local/include" R_CFLAGS="-fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native " make) || exit 1; make[2]: Entering directory '/home/hornik/tmp/scratch/Rtmpg0R4hG/R.INSTALL1990ce4db28aa2/scclust/src/libscclust' gcc-14 -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c src/data_set.c -o src/data_set.o gcc-14 -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c src/digraph_core.c -o src/digraph_core.o gcc-14 -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c src/digraph_operations.c -o src/digraph_operations.o gcc-14 -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c src/dist_search_imp.c -o src/dist_search_imp.o gcc-14 -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c src/error.c -o src/error.o gcc-14 -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c src/hierarchical_clustering.c -o src/hierarchical_clustering.o gcc-14 -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c src/nng_batch_clustering.c -o src/nng_batch_clustering.o gcc-14 -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c src/nng_clustering.c -o src/nng_clustering.o gcc-14 -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c src/nng_core.c -o src/nng_core.o gcc-14 -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c src/nng_findseeds.c -o src/nng_findseeds.o gcc-14 -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c src/scclust_spi.c -o src/scclust_spi.o gcc-14 -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c src/scclust.c -o src/scclust.o gcc-14 -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c src/utilities.c -o src/utilities.o ar -rcs libscclust.a src/data_set.o src/digraph_core.o src/digraph_operations.o src/dist_search_imp.o src/error.o src/hierarchical_clustering.o src/nng_batch_clustering.o src/nng_clustering.o src/nng_core.o src/nng_findseeds.o src/scclust_spi.o src/scclust.o src/utilities.o make[2]: Leaving directory '/home/hornik/tmp/scratch/Rtmpg0R4hG/R.INSTALL1990ce4db28aa2/scclust/src/libscclust' gcc-14 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o scclust.so error.o hierarchical.o internal.o sc_clustering.o scclust-init.o utilities.o libscclust/libscclust.a -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpg0R4hG/R.INSTALL1990ce4db28aa2/scclust/src' make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpg0R4hG/R.INSTALL1990ce4db28aa2/scclust/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpg0R4hG/R.INSTALL1990ce4db28aa2/scclust/src' installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-scclust/00new/scclust/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘scclust’ finding HTML links ... done check_clustering html cluster_count html get_clustering_stats html hierarchical_clustering html is.scclust html sc_clustering html scclust-package html scclust html ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (scclust)