* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘roots’ ...
** package ‘roots’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘roots’
    finding HTML links ... done
    animPlot                                html  
    animPlotGif                             html  
    applyGaussianKernelwithVariableSigma    html  
    bgGeneNorm                              html  
    calculateVariableSigmas                 html  
    colGrad                                 html  
    diffuseMat                              html  
    diffuseProj                             html  
    fastDist                                html  
    filterGenes                             html  
    findLouvain                             html  
    fnc                                     html  
    getTraj                                 html  
    goggles                                 html  
    sparseMarkov                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (roots)