* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘rlibkriging’ ...
** package ‘rlibkriging’ successfully unpacked and MD5 sums checked
** using staged installation
set CMAKE_BIN=/usr/bin/cmake
set CC=gcc-14
set FC=gfortran-14
set CFLAGS=-I/usr/local/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native
set CXX=g++-14
set CXXFLAGS=-std=gnu++17 -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native
set LDFLAGS=-Wl,-O1
travis-ci
-- [31mC [32mo [33ml [34mo [35mr [36mm [37mo [1;31md [1;32me [1;33me [1;34mn [1;35ma [1;36mb [1;37ml [31me [32md [m
fatal: not a git repository (or any parent up to mount point /)
Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set).
-- The C compiler identification is GNU 14.2.0
-- The CXX compiler identification is GNU 14.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/gcc-14 - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/g++-14 - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
CMake Deprecation Warning at armadillo/CMakeLists.txt:43 (cmake_minimum_required):
Compatibility with CMake < 3.10 will be removed from a future version of
CMake.
Update the VERSION argument <min> value. Or, use the <min>...<max> syntax
to tell CMake that the project requires at least <min> but has been updated
to work with policies introduced by <max> or earlier.
-- *** set cmake policy CMP0025 to NEW
-- CMAKE_CXX_STANDARD = 14
-- Configuring Armadillo 14.2.2
--
-- *** WARNING: variable 'CMAKE_CXX_FLAGS' is not empty; this may cause problems!
--
--
-- CMAKE_SYSTEM_NAME = Linux
-- CMAKE_CXX_COMPILER_ID = GNU
-- CMAKE_CXX_COMPILER_VERSION = 14.2.0
-- CMAKE_COMPILER_IS_GNUCXX = 1
--
-- *** options:
-- HEADER_ONLY = OFF
-- STATIC_LIB = on
-- OPENBLAS_PROVIDES_LAPACK = OFF
-- ALLOW_FLEXIBLAS_LINUX = ON
-- ALLOW_OPENBLAS_MACOS = OFF
-- ALLOW_BLAS_LAPACK_MACOS = OFF
-- BUILD_SMOKE_TEST = OFF
--
-- *** Looking for external libraries
-- Found BLAS: /usr/lib/x86_64-linux-gnu/libblas.so
-- Found LAPACK: /usr/lib/x86_64-linux-gnu/liblapack.so
-- FlexiBLAS_FOUND = NO
-- MKL_FOUND = NO
-- OpenBLAS_FOUND = NO
-- ATLAS_FOUND = NO
-- BLAS_FOUND = YES
-- LAPACK_FOUND = YES
-- Found ARPACK: /usr/lib/x86_64-linux-gnu/libarpack.so
-- ARPACK_FOUND = YES
-- Looking for SuperLU version 5
-- Found SuperLU version 7, but version 5 is required
-- Could not find SuperLU
-- SuperLU_FOUND = NO
--
-- *** Result of configuration:
-- *** ARMA_USE_WRAPPER = true
-- *** ARMA_USE_LAPACK = true
-- *** ARMA_USE_BLAS = true
-- *** ARMA_USE_ATLAS = false
-- *** ARMA_USE_ARPACK = true
-- *** ARMA_USE_SUPERLU = false
--
-- *** Armadillo wrapper library links with these libraries:
-- *** ARMA_LIBS = /usr/lib/x86_64-linux-gnu/libblas.so;/usr/lib/x86_64-linux-gnu/liblapack.so;/usr/lib/x86_64-linux-gnu/libarpack.so
--
-- Copying /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/armadillo/include/ to /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/build/armadillo/tmp/include/
-- Generating /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/build/armadillo/tmp/include/armadillo_bits/config.hpp
--
-- CMAKE_CXX_FLAGS = -g -O2 -Wall -pedantic -mtune=native -O2
-- CMAKE_SHARED_LINKER_FLAGS = -Wl,-O1 -Wl,--no-as-needed
-- CMAKE_REQUIRED_INCLUDES =
--
-- CMAKE_INSTALL_PREFIX = /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/build/installed
-- CMAKE_INSTALL_LIBDIR = lib
-- CMAKE_INSTALL_INCLUDEDIR = include
-- CMAKE_INSTALL_DATADIR = share
-- CMAKE_INSTALL_BINDIR = bin
-- *** copying /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/armadillo/misc/ to /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/build/armadillo/tmp/misc/
-- *** generating '/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/build/armadillo/tmp/misc/armadillo.pc'
-- Generating '/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/build/armadillo/ArmadilloConfig.cmake'
-- Generating '/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/build/armadillo/ArmadilloConfigVersion.cmake'
-- Generating '/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/build/armadillo/InstallFiles/ArmadilloConfig.cmake'
-- Generating '/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/build/armadillo/InstallFiles/ArmadilloConfigVersion.cmake'
-- Build static library
-- Static analysis not available.
-- Octave binding available [v9.3.0] but disabled as requested.
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE
-- Could NOT find Matlab (missing: Matlab_INCLUDE_DIRS MAIN_PROGRAM)
-- Matlab binding not available
CMake Warning (dev) at CMakeLists.txt:475 (find_package):
Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
are removed. Run "cmake --help-policy CMP0148" for policy details. Use
the cmake_policy command to set the policy and suppress this warning.
This warning is for project developers. Use -Wno-dev to suppress it.
-- Found PythonInterp: /usr/bin/python3 (found suitable version "3.13.1", minimum required is "3.7")
-- Checking Python requirements
✔ Module numpy>=1.18,<2 is available
✔ Module pytest is available
✔ Module setuptools is available
✔ Module packaging is available
✔ Module wheel is available
-- PYTHON binding available but disabled as requested.
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success
CMake Warning at CMakeLists.txt:646 (message):
clang-format no found; clang-format target is not available.
CMake Warning at CMakeLists.txt:680 (message):
doxygen no found; doc target is not available.
-- Configuring done (2.0s)
-- Generating done (0.0s)
-- Build files have been written to: /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/build
gmake[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/build'
[ 3%] Building CXX object armadillo/CMakeFiles/armadillo.dir/src/wrapper1.cpp.o
[ 6%] Building CXX object armadillo/CMakeFiles/armadillo.dir/src/wrapper2.cpp.o
[ 10%] Linking CXX static library libarmadillo.a
[ 10%] Built target armadillo
[ 13%] Building C object lbfgsb_cpp/CMakeFiles/lbfgsb_cpp.dir/Lbfgsb.3.0/blas.c.o
[ 17%] Building C object lbfgsb_cpp/CMakeFiles/lbfgsb_cpp.dir/Lbfgsb.3.0/lbfgsb.c.o
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c: In function ‘mainlb_’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:507:19: warning: unused variable ‘io___70’ [-Wunused-variable]
507 | static cilist io___70 = { 0, 6, 0, fmt_1007, 0 };
| ^~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:506:19: warning: unused variable ‘io___69’ [-Wunused-variable]
506 | static cilist io___69 = { 0, 6, 0, fmt_1004, 0 };
| ^~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:505:19: warning: unused variable ‘io___65’ [-Wunused-variable]
505 | static cilist io___65 = { 0, 6, 0, fmt_1008, 0 };
| ^~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:504:19: warning: unused variable ‘io___63’ [-Wunused-variable]
504 | static cilist io___63 = { 0, 6, 0, fmt_1005, 0 };
| ^~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:503:19: warning: unused variable ‘io___62’ [-Wunused-variable]
503 | static cilist io___62 = { 0, 6, 0, fmt_1006, 0 };
| ^~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:502:19: warning: unused variable ‘io___60’ [-Wunused-variable]
502 | static cilist io___60 = { 0, 6, 0, fmt_1005, 0 };
| ^~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:501:19: warning: unused variable ‘io___58’ [-Wunused-variable]
501 | static cilist io___58 = { 0, 6, 0, fmt_1001, 0 };
| ^~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:500:19: warning: unused variable ‘io___57’ [-Wunused-variable]
500 | static cilist io___57 = { 0, 0, 0, fmt_1003, 0 };
| ^~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:499:19: warning: unused variable ‘io___56’ [-Wunused-variable]
499 | static cilist io___56 = { 0, 6, 0, fmt_1002, 0 };
| ^~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:389:11: warning: unused variable ‘o__1’ [-Wunused-variable]
389 | olist o__1;
| ^~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c: In function ‘active_’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1264:19: warning: unused variable ‘io___77’ [-Wunused-variable]
1264 | static cilist io___77 = { 0, 6, 0, fmt_1001, 0 };
| ^~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1263:19: warning: unused variable ‘io___76’ [-Wunused-variable]
1263 | static cilist io___76 = { 0, 6, 0, 0, 0 };
| ^~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1262:19: warning: unused variable ‘io___75’ [-Wunused-variable]
1262 | static cilist io___75 = { 0, 6, 0, 0, 0 };
| ^~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c: In function ‘cauchy_’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1594:19: warning: unused variable ‘io___126’ [-Wunused-variable]
1594 | static cilist io___126 = { 0, 6, 0, fmt_2010, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1593:19: warning: unused variable ‘io___125’ [-Wunused-variable]
1593 | static cilist io___125 = { 0, 6, 0, fmt_1010, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1592:19: warning: unused variable ‘io___124’ [-Wunused-variable]
1592 | static cilist io___124 = { 0, 6, 0, fmt_6010, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1591:19: warning: unused variable ‘io___123’ [-Wunused-variable]
1591 | static cilist io___123 = { 0, 6, 0, fmt_4010, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1590:19: warning: unused variable ‘io___122’ [-Wunused-variable]
1590 | static cilist io___122 = { 0, 6, 0, 0, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1589:19: warning: unused variable ‘io___121’ [-Wunused-variable]
1589 | static cilist io___121 = { 0, 6, 0, 0, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1588:19: warning: unused variable ‘io___116’ [-Wunused-variable]
1588 | static cilist io___116 = { 0, 6, 0, 0, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1587:19: warning: unused variable ‘io___113’ [-Wunused-variable]
1587 | static cilist io___113 = { 0, 6, 0, fmt_6010, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1586:19: warning: unused variable ‘io___112’ [-Wunused-variable]
1586 | static cilist io___112 = { 0, 6, 0, fmt_5010, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1585:19: warning: unused variable ‘io___111’ [-Wunused-variable]
1585 | static cilist io___111 = { 0, 6, 0, fmt_4011, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1584:19: warning: unused variable ‘io___104’ [-Wunused-variable]
1584 | static cilist io___104 = { 0, 6, 0, 0, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1583:19: warning: unused variable ‘io___99’ [-Wunused-variable]
1583 | static cilist io___99 = { 0, 6, 0, fmt_1010, 0 };
| ^~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1582:19: warning: unused variable ‘io___90’ [-Wunused-variable]
1582 | static cilist io___90 = { 0, 6, 0, fmt_3010, 0 };
| ^~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1581:19: warning: unused variable ‘io___82’ [-Wunused-variable]
1581 | static cilist io___82 = { 0, 6, 0, 0, 0 };
| ^~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c: In function ‘freev_’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:2812:19: warning: unused variable ‘io___167’ [-Wunused-variable]
2812 | static cilist io___167 = { 0, 6, 0, 0, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:2811:19: warning: unused variable ‘io___165’ [-Wunused-variable]
2811 | static cilist io___165 = { 0, 6, 0, 0, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:2810:19: warning: unused variable ‘io___164’ [-Wunused-variable]
2810 | static cilist io___164 = { 0, 6, 0, 0, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:2809:19: warning: unused variable ‘io___163’ [-Wunused-variable]
2809 | static cilist io___163 = { 0, 6, 0, 0, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c: In function ‘lnsrlb_’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3089:19: warning: unused variable ‘io___178’ [-Wunused-variable]
3089 | static cilist io___178 = { 0, 6, 0, 0, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c: In function ‘prn1lb_’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3374:19: warning: unused variable ‘io___189’ [-Wunused-variable]
3374 | static cilist io___189 = { 0, 6, 0, fmt_1004, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3373:19: warning: unused variable ‘io___188’ [-Wunused-variable]
3373 | static cilist io___188 = { 0, 6, 0, fmt_1004, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3372:19: warning: unused variable ‘io___186’ [-Wunused-variable]
3372 | static cilist io___186 = { 0, 6, 0, fmt_1004, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3371:19: warning: unused variable ‘io___185’ [-Wunused-variable]
3371 | static cilist io___185 = { 0, 0, 0, fmt_9001, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3370:19: warning: unused variable ‘io___184’ [-Wunused-variable]
3370 | static cilist io___184 = { 0, 0, 0, 0, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3369:19: warning: unused variable ‘io___183’ [-Wunused-variable]
3369 | static cilist io___183 = { 0, 0, 0, fmt_2001, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3368:19: warning: unused variable ‘io___182’ [-Wunused-variable]
3368 | static cilist io___182 = { 0, 6, 0, 0, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3367:19: warning: unused variable ‘io___181’ [-Wunused-variable]
3367 | static cilist io___181 = { 0, 6, 0, fmt_7001, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3364:20: warning: unused variable ‘i__’ [-Wunused-variable]
3364 | static integer i__;
| ^~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3356:13: warning: unused variable ‘i__1’ [-Wunused-variable]
3356 | integer i__1;
| ^~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c: In function ‘prn2lb_’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3493:19: warning: unused variable ‘io___197’ [-Wunused-variable]
3493 | static cilist io___197 = { 0, 0, 0, fmt_3001, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3492:19: warning: unused variable ‘io___196’ [-Wunused-variable]
3492 | static cilist io___196 = { 0, 6, 0, fmt_2001, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3491:19: warning: unused variable ‘io___194’ [-Wunused-variable]
3491 | static cilist io___194 = { 0, 6, 0, fmt_1004, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3490:19: warning: unused variable ‘io___192’ [-Wunused-variable]
3490 | static cilist io___192 = { 0, 6, 0, fmt_1004, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3489:19: warning: unused variable ‘io___191’ [-Wunused-variable]
3489 | static cilist io___191 = { 0, 6, 0, fmt_2001, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3488:19: warning: unused variable ‘io___190’ [-Wunused-variable]
3488 | static cilist io___190 = { 0, 6, 0, 0, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3485:25: warning: variable ‘imod’ set but not used [-Wunused-but-set-variable]
3485 | static integer i__, imod;
| ^~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3485:20: warning: unused variable ‘i__’ [-Wunused-variable]
3485 | static integer i__, imod;
| ^~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3476:13: warning: unused variable ‘i__1’ [-Wunused-variable]
3476 | integer i__1;
| ^~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c: In function ‘prn3lb_’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3691:19: warning: unused variable ‘io___225’ [-Wunused-variable]
3691 | static cilist io___225 = { 0, 0, 0, fmt_3008, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3690:19: warning: unused variable ‘io___224’ [-Wunused-variable]
3690 | static cilist io___224 = { 0, 0, 0, fmt_9019, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3689:19: warning: unused variable ‘io___223’ [-Wunused-variable]
3689 | static cilist io___223 = { 0, 0, 0, fmt_9018, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3688:19: warning: unused variable ‘io___222’ [-Wunused-variable]
3688 | static cilist io___222 = { 0, 0, 0, fmt_9015, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3687:19: warning: unused variable ‘io___221’ [-Wunused-variable]
3687 | static cilist io___221 = { 0, 0, 0, fmt_9014, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3686:19: warning: unused variable ‘io___220’ [-Wunused-variable]
3686 | static cilist io___220 = { 0, 0, 0, fmt_9013, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3685:19: warning: unused variable ‘io___219’ [-Wunused-variable]
3685 | static cilist io___219 = { 0, 0, 0, fmt_9012, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3684:19: warning: unused variable ‘io___218’ [-Wunused-variable]
3684 | static cilist io___218 = { 0, 0, 0, fmt_9011, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3683:19: warning: unused variable ‘io___217’ [-Wunused-variable]
3683 | static cilist io___217 = { 0, 0, 0, fmt_3009, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3682:19: warning: unused variable ‘io___216’ [-Wunused-variable]
3682 | static cilist io___216 = { 0, 0, 0, fmt_3002, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3681:19: warning: unused variable ‘io___215’ [-Wunused-variable]
3681 | static cilist io___215 = { 0, 6, 0, fmt_3008, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3680:19: warning: unused variable ‘io___214’ [-Wunused-variable]
3680 | static cilist io___214 = { 0, 6, 0, fmt_3007, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3679:19: warning: unused variable ‘io___213’ [-Wunused-variable]
3679 | static cilist io___213 = { 0, 6, 0, fmt_9019, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3678:19: warning: unused variable ‘io___212’ [-Wunused-variable]
3678 | static cilist io___212 = { 0, 6, 0, fmt_9018, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3677:19: warning: unused variable ‘io___211’ [-Wunused-variable]
3677 | static cilist io___211 = { 0, 6, 0, 0, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3676:19: warning: unused variable ‘io___210’ [-Wunused-variable]
3676 | static cilist io___210 = { 0, 6, 0, 0, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3675:19: warning: unused variable ‘io___209’ [-Wunused-variable]
3675 | static cilist io___209 = { 0, 6, 0, fmt_9015, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3674:19: warning: unused variable ‘io___208’ [-Wunused-variable]
3674 | static cilist io___208 = { 0, 6, 0, fmt_9014, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3673:19: warning: unused variable ‘io___207’ [-Wunused-variable]
3673 | static cilist io___207 = { 0, 6, 0, fmt_9013, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3672:19: warning: unused variable ‘io___206’ [-Wunused-variable]
3672 | static cilist io___206 = { 0, 6, 0, fmt_9012, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3671:19: warning: unused variable ‘io___205’ [-Wunused-variable]
3671 | static cilist io___205 = { 0, 6, 0, fmt_9011, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3670:19: warning: unused variable ‘io___204’ [-Wunused-variable]
3670 | static cilist io___204 = { 0, 6, 0, fmt_3009, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3669:19: warning: unused variable ‘io___203’ [-Wunused-variable]
3669 | static cilist io___203 = { 0, 6, 0, 0, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3668:19: warning: unused variable ‘io___201’ [-Wunused-variable]
3668 | static cilist io___201 = { 0, 6, 0, fmt_1004, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3667:19: warning: unused variable ‘io___200’ [-Wunused-variable]
3667 | static cilist io___200 = { 0, 6, 0, fmt_3005, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3666:19: warning: unused variable ‘io___199’ [-Wunused-variable]
3666 | static cilist io___199 = { 0, 6, 0, fmt_3004, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3665:19: warning: unused variable ‘io___198’ [-Wunused-variable]
3665 | static cilist io___198 = { 0, 6, 0, fmt_3003, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3662:20: warning: unused variable ‘i__’ [-Wunused-variable]
3662 | static integer i__;
| ^~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3654:13: warning: unused variable ‘i__1’ [-Wunused-variable]
3654 | integer i__1;
| ^~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c: In function ‘subsm_’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3989:19: warning: unused variable ‘io___246’ [-Wunused-variable]
3989 | static cilist io___246 = { 0, 6, 0, fmt_1004, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3988:19: warning: unused variable ‘io___243’ [-Wunused-variable]
3988 | static cilist io___243 = { 0, 6, 0, 0, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3987:19: warning: unused variable ‘io___242’ [-Wunused-variable]
3987 | static cilist io___242 = { 0, 6, 0, 0, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3986:19: warning: unused variable ‘io___228’ [-Wunused-variable]
3986 | static cilist io___228 = { 0, 6, 0, fmt_1001, 0 };
| ^~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c: In function ‘dcsrch_’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:4705:16: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
4705 | if (brackt && (*stp <= stmin || *stp >= stmax) || brackt && stmax - stmin
| ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c: At top level:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:26:16: warning: ‘c__5’ defined but not used [-Wunused-variable]
26 | static integer c__5 = 5;
| ^~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:25:16: warning: ‘c__3’ defined but not used [-Wunused-variable]
25 | static integer c__3 = 3;
| ^~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:23:16: warning: ‘c__9’ defined but not used [-Wunused-variable]
23 | static integer c__9 = 9;
| ^~~~
[ 20%] Building C object lbfgsb_cpp/CMakeFiles/lbfgsb_cpp.dir/Lbfgsb.3.0/linpack.c.o
[ 24%] Building C object lbfgsb_cpp/CMakeFiles/lbfgsb_cpp.dir/Lbfgsb.3.0/s_cmp.c.o
[ 27%] Building C object lbfgsb_cpp/CMakeFiles/lbfgsb_cpp.dir/Lbfgsb.3.0/s_copy.c.o
[ 31%] Building C object lbfgsb_cpp/CMakeFiles/lbfgsb_cpp.dir/Lbfgsb.3.0/timer.c.o
[ 34%] Linking C static library liblbfgsb_cpp.a
[ 34%] Built target lbfgsb_cpp
[ 37%] Building CXX object src/lib/CMakeFiles/Kriging.dir/demo/DemoClass.cpp.o
[ 41%] Building CXX object src/lib/CMakeFiles/Kriging.dir/demo/DemoFunction.cpp.o
[ 44%] Building CXX object src/lib/CMakeFiles/Kriging.dir/demo/DemoArmadilloClass.cpp.o
[ 48%] Building CXX object src/lib/CMakeFiles/Kriging.dir/Trend.cpp.o
[ 51%] Building CXX object src/lib/CMakeFiles/Kriging.dir/Optim.cpp.o
[ 55%] Building CXX object src/lib/CMakeFiles/Kriging.dir/Random.cpp.o
[ 58%] Building CXX object src/lib/CMakeFiles/Kriging.dir/LinearAlgebra.cpp.o
[ 62%] Building CXX object src/lib/CMakeFiles/Kriging.dir/Covariance.cpp.o
[ 65%] Building CXX object src/lib/CMakeFiles/Kriging.dir/Kriging.cpp.o
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp: In member function ‘Kriging::KModel Kriging::make_Model(const arma::vec&, std::map<std::__cxx11::basic_string<char>, double>*) const’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp:120:15: warning: unused variable ‘d’ [-Wunused-variable]
120 | arma::uword d = m_X.n_cols;
| ^
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp: In member function ‘double Kriging::_logLikelihood(const arma::vec&, arma::vec*, arma::mat*, KModel*, std::map<std::__cxx11::basic_string<char>, double>*) const’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp:191:17: warning: unused variable ‘p’ [-Wunused-variable]
191 | arma::uword p = m_F.n_cols;
| ^
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp: In member function ‘std::tuple<arma::Col<double>, arma::Col<double> > Kriging::leaveOneOutVec(const arma::vec&)’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp:497:10: warning: variable ‘loo’ set but not used [-Wunused-but-set-variable]
497 | double loo = -1;
| ^~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp: In member function ‘void Kriging::fit(const arma::vec&, const arma::mat&, const Trend::RegressionModel&, bool, const std::string&, const std::string&, const Parameters&)’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp:1146:33: warning: comparison of integer expressions of different signedness: ‘arma::uword’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
1146 | for (arma::uword i = 0; i < multistart; i++) { // TODO: use some foreach/pragma to let OpenMP work.
| ~~^~~~~~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp:1311:33: warning: comparison of integer expressions of different signedness: ‘arma::uword’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
1311 | for (arma::uword i = 0; i < multistart; i++) { // TODO: use some foreach/pragma to let OpenMP work.
| ~~^~~~~~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp: In member function ‘arma::mat Kriging::update_simulate(const arma::vec&, const arma::mat&)’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp:1718:15: warning: unused variable ‘d’ [-Wunused-variable]
1718 | arma::uword d = m_X.n_cols;
| ^
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp:1722:15: warning: unused variable ‘n_on’ [-Wunused-variable]
1722 | arma::uword n_on = n_o + n_n;
| ^~~~
In file included from /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/build/armadillo/tmp/include/armadillo:669,
from /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/include/libKriging/utils/lk_armadillo.hpp:6,
from /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp:8:
In destructor ‘arma::Mat<eT>::~Mat() [with eT = double]’,
inlined from ‘arma::Col<double>::~Col()’ at /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/build/armadillo/tmp/include/armadillo_bits/Col_bones.hpp:25:7,
inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_destroy() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:283:35,
inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:314:14,
inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:311:7,
inlined from ‘std::_Optional_payload<_Tp, false, _Copy, _Move>::~_Optional_payload() [with _Tp = arma::Col<double>; bool _Copy = false; bool _Move = false]’ at /usr/include/c++/14/optional:437:65,
inlined from ‘std::_Optional_base<arma::Col<double>, false, false>::~_Optional_base()’ at /usr/include/c++/14/optional:508:12,
inlined from ‘constexpr std::optional<_Tp>::optional(std::optional<_Up>&&) [with _Up = arma::Gen<arma::Col<double>, arma::gen_ones>; typename std::enable_if<__and_v<std::__not_<std::is_same<_T1, _U1> >, std::is_constructible<_T1, _U1>, std::is_convertible<_U1, _T1>, std::__not_<std::__or_<std::is_constructible<_Tp, const std::optional<_Up>&>, std::is_constructible<_Tp, std::optional<_Up>&>, std::is_constructible<_Tp, const std::optional<_Up>&&>, std::is_constructible<_Tp, std::optional<_Up>&&>, std::is_convertible<const std::optional<_Up>&, _Tp>, std::is_convertible<std::optional<_Up>&, _Tp>, std::is_convertible<const std::optional<_Up>&&, _Tp>, std::is_convertible<std::optional<_Up>&&, _Tp> > > >, bool>::type <anonymous> = true; _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:795:2,
inlined from ‘void Kriging::update(const arma::vec&, const arma::mat&, bool)’ at /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp:1860:20:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/build/armadillo/tmp/include/armadillo_bits/Mat_meat.hpp:29:6: warning: ‘*(arma::Mat<double>*)((char*)&<unnamed> + offsetof(Parameters, KrigingParameters::beta.std::optional<arma::Col<double> >::<unnamed>.std::_Optional_base<arma::Col<double>, false, false>::<unnamed>)).arma::Mat<double>::n_alloc’ may be used uninitialized [-Wmaybe-uninitialized]
29 | if(n_alloc > 0)
| ^~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp: In member function ‘void Kriging::update(const arma::vec&, const arma::mat&, bool)’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp:1865:35: note: ‘<anonymous>’ declared here
1865 | true};
| ^
In destructor ‘arma::Mat<eT>::~Mat() [with eT = double]’,
inlined from ‘arma::Col<double>::~Col()’ at /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/build/armadillo/tmp/include/armadillo_bits/Col_bones.hpp:25:7,
inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_destroy() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:283:35,
inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:314:14,
inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:311:7,
inlined from ‘std::_Optional_payload<_Tp, false, _Copy, _Move>::~_Optional_payload() [with _Tp = arma::Col<double>; bool _Copy = false; bool _Move = false]’ at /usr/include/c++/14/optional:437:65,
inlined from ‘std::_Optional_base<arma::Col<double>, false, false>::~_Optional_base()’ at /usr/include/c++/14/optional:508:12,
inlined from ‘constexpr std::optional<_Tp>::optional(std::optional<_Up>&&) [with _Up = arma::Gen<arma::Col<double>, arma::gen_ones>; typename std::enable_if<__and_v<std::__not_<std::is_same<_T1, _U1> >, std::is_constructible<_T1, _U1>, std::is_convertible<_U1, _T1>, std::__not_<std::__or_<std::is_constructible<_Tp, const std::optional<_Up>&>, std::is_constructible<_Tp, std::optional<_Up>&>, std::is_constructible<_Tp, const std::optional<_Up>&&>, std::is_constructible<_Tp, std::optional<_Up>&&>, std::is_convertible<const std::optional<_Up>&, _Tp>, std::is_convertible<std::optional<_Up>&, _Tp>, std::is_convertible<const std::optional<_Up>&&, _Tp>, std::is_convertible<std::optional<_Up>&&, _Tp> > > >, bool>::type <anonymous> = true; _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:795:2,
inlined from ‘void Kriging::update(const arma::vec&, const arma::mat&, bool)’ at /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp:1860:20:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/build/armadillo/tmp/include/armadillo_bits/Mat_meat.hpp:32:20: warning: ‘((const double**)((char*)&<unnamed> + offsetof(Parameters, KrigingParameters::beta.std::optional<arma::Col<double> >::<unnamed>.std::_Optional_base<arma::Col<double>, false, false>::_M_payload.std::_Optional_payload<arma::Col<double>, false, false, false>::<unnamed>.std::_Optional_payload<arma::Col<double>, true, false, false>::<unnamed>.std::_Optional_payload_base<arma::Col<double> >::_M_payload)))[4]’ may be used uninitialized [-Wmaybe-uninitialized]
32 | memory::release( access::rw(mem) );
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp: In member function ‘void Kriging::update(const arma::vec&, const arma::mat&, bool)’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp:1865:35: note: ‘<anonymous>’ declared here
1865 | true};
| ^
In destructor ‘arma::Mat<eT>::~Mat() [with eT = double]’,
inlined from ‘arma::Col<double>::~Col()’ at /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/build/armadillo/tmp/include/armadillo_bits/Col_bones.hpp:25:7,
inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_destroy() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:283:35,
inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:314:14,
inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:311:7,
inlined from ‘std::_Optional_payload<_Tp, false, _Copy, _Move>::~_Optional_payload() [with _Tp = arma::Col<double>; bool _Copy = false; bool _Move = false]’ at /usr/include/c++/14/optional:437:65,
inlined from ‘std::_Optional_base<arma::Col<double>, false, false>::~_Optional_base()’ at /usr/include/c++/14/optional:508:12,
inlined from ‘constexpr std::optional<_Tp>::optional(std::optional<_Up>&&) [with _Up = arma::Op<arma::Col<double>, arma::op_htrans2>; typename std::enable_if<__and_v<std::__not_<std::is_same<_T1, _U1> >, std::is_constructible<_T1, _U1>, std::is_convertible<_U1, _T1>, std::__not_<std::__or_<std::is_constructible<_Tp, const std::optional<_Up>&>, std::is_constructible<_Tp, std::optional<_Up>&>, std::is_constructible<_Tp, const std::optional<_Up>&&>, std::is_constructible<_Tp, std::optional<_Up>&&>, std::is_convertible<const std::optional<_Up>&, _Tp>, std::is_convertible<std::optional<_Up>&, _Tp>, std::is_convertible<const std::optional<_Up>&&, _Tp>, std::is_convertible<std::optional<_Up>&&, _Tp> > > >, bool>::type <anonymous> = true; _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:795:2,
inlined from ‘void Kriging::update(const arma::vec&, const arma::mat&, bool)’ at /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp:1867:20:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/build/armadillo/tmp/include/armadillo_bits/Mat_meat.hpp:29:6: warning: ‘*(arma::Mat<double>*)((char*)&<unnamed> + offsetof(Parameters, KrigingParameters::beta.std::optional<arma::Col<double> >::<unnamed>.std::_Optional_base<arma::Col<double>, false, false>::<unnamed>)).arma::Mat<double>::n_alloc’ may be used uninitialized [-Wmaybe-uninitialized]
29 | if(n_alloc > 0)
| ^~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp: In member function ‘void Kriging::update(const arma::vec&, const arma::mat&, bool)’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp:1872:36: note: ‘<anonymous>’ declared here
1872 | false};
| ^
In destructor ‘arma::Mat<eT>::~Mat() [with eT = double]’,
inlined from ‘arma::Col<double>::~Col()’ at /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/build/armadillo/tmp/include/armadillo_bits/Col_bones.hpp:25:7,
inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_destroy() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:283:35,
inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:314:14,
inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:311:7,
inlined from ‘std::_Optional_payload<_Tp, false, _Copy, _Move>::~_Optional_payload() [with _Tp = arma::Col<double>; bool _Copy = false; bool _Move = false]’ at /usr/include/c++/14/optional:437:65,
inlined from ‘std::_Optional_base<arma::Col<double>, false, false>::~_Optional_base()’ at /usr/include/c++/14/optional:508:12,
inlined from ‘constexpr std::optional<_Tp>::optional(std::optional<_Up>&&) [with _Up = arma::Op<arma::Col<double>, arma::op_htrans2>; typename std::enable_if<__and_v<std::__not_<std::is_same<_T1, _U1> >, std::is_constructible<_T1, _U1>, std::is_convertible<_U1, _T1>, std::__not_<std::__or_<std::is_constructible<_Tp, const std::optional<_Up>&>, std::is_constructible<_Tp, std::optional<_Up>&>, std::is_constructible<_Tp, const std::optional<_Up>&&>, std::is_constructible<_Tp, std::optional<_Up>&&>, std::is_convertible<const std::optional<_Up>&, _Tp>, std::is_convertible<std::optional<_Up>&, _Tp>, std::is_convertible<const std::optional<_Up>&&, _Tp>, std::is_convertible<std::optional<_Up>&&, _Tp> > > >, bool>::type <anonymous> = true; _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:795:2,
inlined from ‘void Kriging::update(const arma::vec&, const arma::mat&, bool)’ at /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp:1867:20:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/build/armadillo/tmp/include/armadillo_bits/Mat_meat.hpp:32:20: warning: ‘((const double**)((char*)&<unnamed> + offsetof(Parameters, KrigingParameters::beta.std::optional<arma::Col<double> >::<unnamed>.std::_Optional_base<arma::Col<double>, false, false>::_M_payload.std::_Optional_payload<arma::Col<double>, false, false, false>::<unnamed>.std::_Optional_payload<arma::Col<double>, true, false, false>::<unnamed>.std::_Optional_payload_base<arma::Col<double> >::_M_payload)))[4]’ may be used uninitialized [-Wmaybe-uninitialized]
32 | memory::release( access::rw(mem) );
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp: In member function ‘void Kriging::update(const arma::vec&, const arma::mat&, bool)’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp:1872:36: note: ‘<anonymous>’ declared here
1872 | false};
| ^
In destructor ‘arma::Mat<eT>::~Mat() [with eT = double]’,
inlined from ‘arma::Col<double>::~Col()’ at /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/build/armadillo/tmp/include/armadillo_bits/Col_bones.hpp:25:7,
inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_destroy() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:283:35,
inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:314:14,
inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:311:7,
inlined from ‘std::_Optional_payload<_Tp, false, _Copy, _Move>::~_Optional_payload() [with _Tp = arma::Col<double>; bool _Copy = false; bool _Move = false]’ at /usr/include/c++/14/optional:437:65,
inlined from ‘std::_Optional_base<arma::Col<double>, false, false>::~_Optional_base()’ at /usr/include/c++/14/optional:508:12,
inlined from ‘constexpr std::optional<_Tp>::optional(std::optional<_Up>&&) [with _Up = arma::eOp<arma::Col<double>, arma::eop_scalar_times>; typename std::enable_if<__and_v<std::__not_<std::is_same<_T1, _U1> >, std::is_constructible<_T1, _U1>, std::is_convertible<_U1, _T1>, std::__not_<std::__or_<std::is_constructible<_Tp, const std::optional<_Up>&>, std::is_constructible<_Tp, std::optional<_Up>&>, std::is_constructible<_Tp, const std::optional<_Up>&&>, std::is_constructible<_Tp, std::optional<_Up>&&>, std::is_convertible<const std::optional<_Up>&, _Tp>, std::is_convertible<std::optional<_Up>&, _Tp>, std::is_convertible<const std::optional<_Up>&&, _Tp>, std::is_convertible<std::optional<_Up>&&, _Tp> > > >, bool>::type <anonymous> = true; _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:795:2,
inlined from ‘void Kriging::update(const arma::vec&, const arma::mat&, bool)’ at /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp:1882:18:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/build/armadillo/tmp/include/armadillo_bits/Mat_meat.hpp:29:6: warning: ‘*(arma::Mat<double>*)((char*)&<unnamed> + offsetof(Parameters, KrigingParameters::beta.std::optional<arma::Col<double> >::<unnamed>.std::_Optional_base<arma::Col<double>, false, false>::<unnamed>)).arma::Mat<double>::n_alloc’ may be used uninitialized [-Wmaybe-uninitialized]
29 | if(n_alloc > 0)
| ^~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp: In member function ‘void Kriging::update(const arma::vec&, const arma::mat&, bool)’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp:1887:34: note: ‘<anonymous>’ declared here
1887 | false};
| ^
In destructor ‘arma::Mat<eT>::~Mat() [with eT = double]’,
inlined from ‘arma::Col<double>::~Col()’ at /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/build/armadillo/tmp/include/armadillo_bits/Col_bones.hpp:25:7,
inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_destroy() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:283:35,
inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:314:14,
inlined from ‘constexpr void std::_Optional_payload_base<_Tp>::_M_reset() [with _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:311:7,
inlined from ‘std::_Optional_payload<_Tp, false, _Copy, _Move>::~_Optional_payload() [with _Tp = arma::Col<double>; bool _Copy = false; bool _Move = false]’ at /usr/include/c++/14/optional:437:65,
inlined from ‘std::_Optional_base<arma::Col<double>, false, false>::~_Optional_base()’ at /usr/include/c++/14/optional:508:12,
inlined from ‘constexpr std::optional<_Tp>::optional(std::optional<_Up>&&) [with _Up = arma::eOp<arma::Col<double>, arma::eop_scalar_times>; typename std::enable_if<__and_v<std::__not_<std::is_same<_T1, _U1> >, std::is_constructible<_T1, _U1>, std::is_convertible<_U1, _T1>, std::__not_<std::__or_<std::is_constructible<_Tp, const std::optional<_Up>&>, std::is_constructible<_Tp, std::optional<_Up>&>, std::is_constructible<_Tp, const std::optional<_Up>&&>, std::is_constructible<_Tp, std::optional<_Up>&&>, std::is_convertible<const std::optional<_Up>&, _Tp>, std::is_convertible<std::optional<_Up>&, _Tp>, std::is_convertible<const std::optional<_Up>&&, _Tp>, std::is_convertible<std::optional<_Up>&&, _Tp> > > >, bool>::type <anonymous> = true; _Tp = arma::Col<double>]’ at /usr/include/c++/14/optional:795:2,
inlined from ‘void Kriging::update(const arma::vec&, const arma::mat&, bool)’ at /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp:1882:18:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/build/armadillo/tmp/include/armadillo_bits/Mat_meat.hpp:32:20: warning: ‘((const double**)((char*)&<unnamed> + offsetof(Parameters, KrigingParameters::beta.std::optional<arma::Col<double> >::<unnamed>.std::_Optional_base<arma::Col<double>, false, false>::_M_payload.std::_Optional_payload<arma::Col<double>, false, false, false>::<unnamed>.std::_Optional_payload<arma::Col<double>, true, false, false>::<unnamed>.std::_Optional_payload_base<arma::Col<double> >::_M_payload)))[4]’ may be used uninitialized [-Wmaybe-uninitialized]
32 | memory::release( access::rw(mem) );
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp: In member function ‘void Kriging::update(const arma::vec&, const arma::mat&, bool)’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/Kriging.cpp:1887:34: note: ‘<anonymous>’ declared here
1887 | false};
| ^
[ 68%] Building CXX object src/lib/CMakeFiles/Kriging.dir/NuggetKriging.cpp.o
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/NuggetKriging.cpp: In member function ‘NuggetKriging::KModel NuggetKriging::make_Model(const arma::vec&, double, std::map<std::__cxx11::basic_string<char>, double>*) const’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:123:15: warning: unused variable ‘d’ [-Wunused-variable]
123 | arma::uword d = m_X.n_cols;
| ^
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/NuggetKriging.cpp: In member function ‘void NuggetKriging::fit(const arma::vec&, const arma::mat&, const Trend::RegressionModel&, bool, const std::string&, const std::string&, const Parameters&)’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:904:31: warning: comparison of integer expressions of different signedness: ‘arma::uword’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
904 | for (arma::uword i = 0; i < multistart; i++) {
| ~~^~~~~~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/NuggetKriging.cpp: In member function ‘arma::mat NuggetKriging::update_simulate(const arma::vec&, const arma::mat&)’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:1408:15: warning: unused variable ‘d’ [-Wunused-variable]
1408 | arma::uword d = m_X.n_cols;
| ^
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:1412:15: warning: unused variable ‘n_on’ [-Wunused-variable]
1412 | arma::uword n_on = n_o + n_n;
| ^~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/NuggetKriging.cpp: In member function ‘double NuggetKriging::_logMargPost(const arma::vec&, arma::vec*, KModel*, std::map<std::__cxx11::basic_string<char>, double>*) const’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:433:23: warning: ‘_sigma2’ may be used uninitialized [-Wmaybe-uninitialized]
433 | double log_S_2 = log(_sigma2 * (n - p));
| ~~~^~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:370:10: note: ‘_sigma2’ was declared here
370 | double _sigma2;
| ^~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:447:48: warning: ‘_nugget’ may be used uninitialized [-Wmaybe-uninitialized]
447 | double t = arma::accu(CL / _theta) + _nugget / _sigma2;
| ~~~~~~~~^~~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:371:10: note: ‘_nugget’ was declared here
371 | double _nugget;
| ^~~~~~~
[ 72%] Building CXX object src/lib/CMakeFiles/Kriging.dir/NoiseKriging.cpp.o
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/NoiseKriging.cpp: In member function ‘NoiseKriging::KModel NoiseKriging::make_Model(const arma::vec&, double, std::map<std::__cxx11::basic_string<char>, double>*) const’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:121:15: warning: unused variable ‘d’ [-Wunused-variable]
121 | arma::uword d = m_X.n_cols;
| ^
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/NoiseKriging.cpp: In member function ‘void NoiseKriging::fit(const arma::vec&, const arma::vec&, const arma::mat&, const Trend::RegressionModel&, bool, const std::string&, const std::string&, const Parameters&)’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:516:31: warning: comparison of integer expressions of different signedness: ‘arma::uword’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
516 | for (arma::uword i = 0; i < multistart; i++) {
| ~~^~~~~~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:605:50: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
605 | || (sol_to_b < arma::datum::eps) && (result.num_iters <= 2) // we fastly converged to one bound
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/NoiseKriging.cpp: In member function ‘arma::mat NoiseKriging::update_simulate(const arma::vec&, const arma::vec&, const arma::mat&)’:
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:1000:15: warning: unused variable ‘d’ [-Wunused-variable]
1000 | arma::uword d = m_X.n_cols;
| ^
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:1004:15: warning: unused variable ‘n_on’ [-Wunused-variable]
1004 | arma::uword n_on = n_o + n_n;
| ^~~~
[ 75%] Building CXX object src/lib/CMakeFiles/Kriging.dir/KrigingLoader.cpp.o
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[ 96%] Building CXX object src/lib/CMakeFiles/Kriging.dir/__/__/version.cpp.o
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[100%] Built target Kriging
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[100%] Built target install.lib
gmake[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/libK/build'
R version 4.4.2 Patched (2025-01-28 r87669) -- "Pile of Leaves"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> Rcpp::compileAttributes(pkgdir = '.', verbose = TRUE)
Exports from /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/kriging_binding.cpp:
Rcpp::List new_Kriging(std::string kernel)
Rcpp::List new_KrigingFit(arma::vec y, arma::mat X, std::string kernel, std::string regmodel = "constant", bool normalize = false, std::string optim = "BFGS", std::string objective = "LL", Rcpp::Nullable<Rcpp::List> parameters = R_NilValue)
void kriging_fit(Rcpp::List k, arma::vec y, arma::mat X, std::string regmodel = "constant", bool normalize = false, std::string optim = "BFGS", std::string objective = "LL", Rcpp::Nullable<Rcpp::List> parameters = R_NilValue)
Rcpp::List kriging_copy(Rcpp::List k)
Rcpp::List kriging_model(Rcpp::List k)
std::string kriging_summary(Rcpp::List k)
Rcpp::List kriging_predict(Rcpp::List k, arma::mat X_n, bool return_stdev = true, bool return_cov = false, bool return_deriv = false)
arma::mat kriging_simulate(Rcpp::List k, int nsim, int seed, arma::mat X_n, bool will_update = false)
arma::mat kriging_update_simulate(Rcpp::List k, arma::vec y_u, arma::mat X_u)
void kriging_update(Rcpp::List k, arma::vec y_u, arma::mat X_u, bool refit = true)
void kriging_save(Rcpp::List k, std::string filename)
arma::mat kriging_covMat(Rcpp::List k, arma::mat X1, arma::mat X2)
Rcpp::List kriging_logLikelihoodFun(Rcpp::List k, arma::vec theta, bool return_grad = false, bool return_hess = false, bool bench = false)
double kriging_logLikelihood(Rcpp::List k)
Rcpp::List kriging_leaveOneOutFun(Rcpp::List k, arma::vec theta, bool return_grad = false, bool bench = false)
Rcpp::List kriging_leaveOneOutVec(Rcpp::List k, arma::vec theta)
double kriging_leaveOneOut(Rcpp::List k)
Rcpp::List kriging_logMargPostFun(Rcpp::List k, arma::vec theta, bool return_grad = false, bool bench = false)
double kriging_logMargPost(Rcpp::List k)
std::string kriging_kernel(Rcpp::List k)
std::string kriging_optim(Rcpp::List k)
std::string kriging_objective(Rcpp::List k)
arma::mat kriging_X(Rcpp::List k)
arma::vec kriging_centerX(Rcpp::List k)
arma::vec kriging_scaleX(Rcpp::List k)
arma::vec kriging_y(Rcpp::List k)
double kriging_centerY(Rcpp::List k)
double kriging_scaleY(Rcpp::List k)
bool kriging_normalize(Rcpp::List k)
std::string kriging_regmodel(Rcpp::List k)
arma::mat kriging_F(Rcpp::List k)
arma::mat kriging_T(Rcpp::List k)
arma::mat kriging_M(Rcpp::List k)
arma::vec kriging_z(Rcpp::List k)
arma::vec kriging_beta(Rcpp::List k)
bool kriging_is_beta_estim(Rcpp::List k)
arma::vec kriging_theta(Rcpp::List k)
bool kriging_is_theta_estim(Rcpp::List k)
double kriging_sigma2(Rcpp::List k)
bool kriging_is_sigma2_estim(Rcpp::List k)
Exports from /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/linalg.cpp:
double linalg_get_num_nugget()
void linalg_set_num_nugget(double nugget)
void linalg_check_chol_rcond(bool cr)
bool linalg_chol_rcond_checked()
arma::mat linalg_chol_safe(arma::mat X)
void linalg_set_chol_warning(bool warn)
double linalg_rcond_approx_chol(arma::mat X)
double linalg_rcond_chol(arma::mat X)
arma::mat linalg_chol_block(arma::mat C, arma::mat Loo)
Exports from /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/load.cpp:
Rcpp::List kriging_load(std::string filename)
Rcpp::List noisekriging_load(std::string filename)
Rcpp::List nuggetkriging_load(std::string filename)
std::string class_saved(std::string filename)
Exports from /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/noisekriging_binding.cpp:
Rcpp::List new_NoiseKriging(std::string kernel)
Rcpp::List new_NoiseKrigingFit(arma::vec y, arma::vec noise, arma::mat X, std::string kernel, std::string regmodel = "constant", bool normalize = false, std::string optim = "BFGS", std::string objective = "LL", Rcpp::Nullable<Rcpp::List> parameters = R_NilValue)
void noisekriging_fit(Rcpp::List k, arma::vec y, arma::vec noise, arma::mat X, std::string regmodel = "constant", bool normalize = false, std::string optim = "BFGS", std::string objective = "LL", Rcpp::Nullable<Rcpp::List> parameters = R_NilValue)
Rcpp::List noisekriging_copy(Rcpp::List k)
Rcpp::List noisekriging_model(Rcpp::List k)
std::string noisekriging_summary(Rcpp::List k)
Rcpp::List noisekriging_predict(Rcpp::List k, arma::mat X_n, bool return_stdev = true, bool return_cov = false, bool return_deriv = false)
arma::mat noisekriging_simulate(Rcpp::List k, int nsim, int seed, arma::mat X_n, arma::vec with_noise, bool will_update = false)
arma::mat noisekriging_update_simulate(Rcpp::List k, arma::vec y_u, arma::vec noise_u, arma::mat X_u)
void noisekriging_update(Rcpp::List k, arma::vec y_u, arma::vec noise_u, arma::mat X_u, bool refit = true)
void noisekriging_save(Rcpp::List k, std::string filename)
arma::mat noisekriging_covMat(Rcpp::List k, arma::mat X1, arma::mat X2)
Rcpp::List noisekriging_logLikelihoodFun(Rcpp::List k, arma::vec theta_sigma2, bool return_grad = false, bool bench = false)
double noisekriging_logLikelihood(Rcpp::List k)
std::string noisekriging_kernel(Rcpp::List k)
std::string noisekriging_optim(Rcpp::List k)
std::string noisekriging_objective(Rcpp::List k)
arma::mat noisekriging_X(Rcpp::List k)
arma::vec noisekriging_centerX(Rcpp::List k)
arma::vec noisekriging_scaleX(Rcpp::List k)
arma::vec noisekriging_y(Rcpp::List k)
arma::vec noisekriging_noise(Rcpp::List k)
double noisekriging_centerY(Rcpp::List k)
double noisekriging_scaleY(Rcpp::List k)
bool noisekriging_normalize(Rcpp::List k)
std::string noisekriging_regmodel(Rcpp::List k)
arma::mat noisekriging_F(Rcpp::List k)
arma::mat noisekriging_T(Rcpp::List k)
arma::mat noisekriging_M(Rcpp::List k)
arma::vec noisekriging_z(Rcpp::List k)
arma::vec noisekriging_beta(Rcpp::List k)
bool noisekriging_is_beta_estim(Rcpp::List k)
arma::vec noisekriging_theta(Rcpp::List k)
bool noisekriging_is_theta_estim(Rcpp::List k)
double noisekriging_sigma2(Rcpp::List k)
bool noisekriging_is_sigma2_estim(Rcpp::List k)
Exports from /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/nuggetkriging_binding.cpp:
Rcpp::List new_NuggetKriging(std::string kernel)
Rcpp::List new_NuggetKrigingFit(arma::vec y, arma::mat X, std::string kernel, std::string regmodel = "constant", bool normalize = false, std::string optim = "BFGS", std::string objective = "LL", Rcpp::Nullable<Rcpp::List> parameters = R_NilValue)
void nuggetkriging_fit(Rcpp::List k, arma::vec y, arma::mat X, std::string regmodel = "constant", bool normalize = false, std::string optim = "BFGS", std::string objective = "LL", Rcpp::Nullable<Rcpp::List> parameters = R_NilValue)
Rcpp::List nuggetkriging_copy(Rcpp::List k)
Rcpp::List nuggetkriging_model(Rcpp::List k)
std::string nuggetkriging_summary(Rcpp::List k)
Rcpp::List nuggetkriging_predict(Rcpp::List k, arma::mat X_n, bool return_stdev = true, bool return_cov = false, bool return_deriv = false)
arma::mat nuggetkriging_simulate(Rcpp::List k, int nsim, int seed, arma::mat X_n, bool with_nugget = true, bool will_update = false)
arma::mat nuggetkriging_update_simulate(Rcpp::List k, arma::vec y_u, arma::mat X_u)
void nuggetkriging_update(Rcpp::List k, arma::vec y_u, arma::mat X_u, bool refit = true)
void nuggetkriging_save(Rcpp::List k, std::string filename)
arma::mat nuggetkriging_covMat(Rcpp::List k, arma::mat X1, arma::mat X2)
Rcpp::List nuggetkriging_logLikelihoodFun(Rcpp::List k, arma::vec theta_alpha, bool return_grad = false, bool bench = false)
double nuggetkriging_logLikelihood(Rcpp::List k)
Rcpp::List nuggetkriging_logMargPostFun(Rcpp::List k, arma::vec theta, bool return_grad = false, bool bench = false)
double nuggetkriging_logMargPost(Rcpp::List k)
std::string nuggetkriging_kernel(Rcpp::List k)
std::string nuggetkriging_optim(Rcpp::List k)
std::string nuggetkriging_objective(Rcpp::List k)
arma::mat nuggetkriging_X(Rcpp::List k)
arma::vec nuggetkriging_centerX(Rcpp::List k)
arma::vec nuggetkriging_scaleX(Rcpp::List k)
arma::vec nuggetkriging_y(Rcpp::List k)
double nuggetkriging_centerY(Rcpp::List k)
double nuggetkriging_scaleY(Rcpp::List k)
bool nuggetkriging_normalize(Rcpp::List k)
std::string nuggetkriging_regmodel(Rcpp::List k)
arma::mat nuggetkriging_F(Rcpp::List k)
arma::mat nuggetkriging_T(Rcpp::List k)
arma::mat nuggetkriging_M(Rcpp::List k)
arma::vec nuggetkriging_z(Rcpp::List k)
arma::vec nuggetkriging_beta(Rcpp::List k)
bool nuggetkriging_is_beta_estim(Rcpp::List k)
arma::vec nuggetkriging_theta(Rcpp::List k)
bool nuggetkriging_is_theta_estim(Rcpp::List k)
double nuggetkriging_sigma2(Rcpp::List k)
bool nuggetkriging_is_sigma2_estim(Rcpp::List k)
double nuggetkriging_nugget(Rcpp::List k)
bool nuggetkriging_is_nugget_estim(Rcpp::List k)
Exports from /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/optim.cpp:
bool optim_is_reparametrized()
void optim_use_reparametrize(bool reparametrize)
double optim_get_theta_lower_factor()
void optim_set_theta_lower_factor(double theta_lower_factor)
double optim_get_theta_upper_factor()
void optim_set_theta_upper_factor(double theta_upper_factor)
bool optim_variogram_bounds_heuristic_used()
void optim_use_variogram_bounds_heuristic(bool variogram_bounds_heuristic)
void optim_log(int l)
int optim_get_max_iteration()
void optim_set_max_iteration(int max_iteration)
double optim_get_gradient_tolerance()
void optim_set_gradient_tolerance(double gradient_tolerance)
double optim_get_objective_rel_tolerance()
void optim_set_objective_rel_tolerance(double objective_rel_tolerance)
Exports from /home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/random.cpp:
void random_reset_seed(unsigned int seed)
double random_randu()
arma::vec random_randu_vec(unsigned int n)
arma::mat random_randu_mat(unsigned int n, unsigned int d)
arma::mat random_randn_mat(unsigned int n, unsigned int d)
/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/R/RcppExports.R updated.
>
>
** libs
using C++ compiler: ‘g++-14 (Debian 14.2.0-12) 14.2.0’
using C++17
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I"/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I"/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c kriging_binding.cpp -o kriging_binding.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I"/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c linalg.cpp -o linalg.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I"/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c load.cpp -o load.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I"/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c noisekriging_binding.cpp -o noisekriging_binding.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I"/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c nuggetkriging_binding.cpp -o nuggetkriging_binding.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I"/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c optim.cpp -o optim.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I"/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c random.cpp -o random.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o rlibkriging.so RcppExports.o kriging_binding.o linalg.o load.o noisekriging_binding.o nuggetkriging_binding.o optim.o random.o -fopenmp -L/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src/../inst//lib -lKriging -larmadillo -llbfgsb_cpp /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/liblapack.so /usr/lib/x86_64-linux-gnu/libarpack.so -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp514DM9/R.INSTALL305e4316bea052/rlibkriging/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-rlibkriging/00new/rlibkriging/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘rlibkriging’
finding HTML links ... done
KM-class html
KM html
Kriging html
NoiseKM-class html
NoiseKM html
NoiseKriging html
NuggetKM-class html
NuggetKM html
NuggetKriging html
as.km.Kriging html
as.km.NoiseKriging html
as.km.NuggetKriging html
as.km html
as.list.Kriging html
as.list.NoiseKriging html
as.list.NuggetKriging html
classKriging html
classNoiseKriging html
classNuggetKriging html
copy.Kriging html
copy.NoiseKriging html
copy.NuggetKriging html
copy html
covMat.Kriging html
covMat.NoiseKriging html
covMat.NuggetKriging html
covMat html
fit.Kriging html
fit.NoiseKriging html
fit.NuggetKriging html
fit html
leaveOneOut.Kriging html
leaveOneOut html
leaveOneOutFun.Kriging html
leaveOneOutFun html
leaveOneOutVec.Kriging html
leaveOneOutVec html
load.Kriging html
load.NoiseKriging html
load.NuggetKriging html
load html
logLikelihood.Kriging html
logLikelihood.NoiseKriging html
logLikelihood.NuggetKriging html
logLikelihood html
logLikelihoodFun.Kriging html
logLikelihoodFun.NoiseKriging html
logLikelihoodFun.NuggetKriging html
logLikelihoodFun html
logMargPost.Kriging html
logMargPost.NuggetKriging html
logMargPost html
logMargPostFun.Kriging html
logMargPostFun.NuggetKriging html
logMargPostFun html
predict-KM-method html
predict-NoiseKM-method html
predict-NuggetKM-method html
predict.Kriging html
predict.NoiseKriging html
predict.NuggetKriging html
print.Kriging html
print.NoiseKriging html
print.NuggetKriging html
save.Kriging html
save.NoiseKriging html
save.NuggetKriging html
save html
simulate-KM-method html
simulate-NoiseKM-method html
simulate-NuggetKM-method html
simulate.Kriging html
simulate.NoiseKriging html
simulate.NuggetKriging html
update-KM-method html
update-NoiseKM-method html
update-NuggetKM-method html
update.Kriging html
update.NoiseKriging html
update.NuggetKriging html
update_simulate.Kriging html
update_simulate.NoiseKriging html
update_simulate.NuggetKriging html
update_simulate html
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rlibkriging)