* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘pmd’ ... ** package ‘pmd’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘pmd’ finding HTML links ... done getcda html getchain html getcluster html getcorcluster html getms2pmd html getmspmd html getpaired html getpmd html getposneg html getrda html getreact html getsda html getstd html gettarget html globalstd html hmdb html keggrall html omics html pcasf html plotcn html plotpaired html plotrtg html plotsda html plotstd html plotstdrt html plotstdsda html pmdanno html runPMD html runPMDnet html sda html spmeinvivo html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pmd)